Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22400 AT4G40000 AT4G40000 |
| fragaria_vesca | FvH4_1g20370 FvH4_1g20370 FvH4_1g20370 |
| malus_domestica | MD01G1034300.v1.1 MD15G1321600.v1.1 |
| prunus_persica | Prupe.6G191700_v2.0.a1 Prupe.6G191700_v2.0.a1 |
| pyrus_communis | pycom01g06140 pycom15g28220 |
| rosa_chinensis | RchiOBHm_Chr2g0112501 |
| rosa_laevigata | RLG00000017986 |
| rosa_multiflora | Rmu_sc0001499.1_g000061 |
| rosa_roxburghii | Rroxscaffold_2G00131370 |
| rosa_rugosa | Rorug02G0181300 |
| rosa_samantha | Rh2AG234500 Rh2BG248100 Rh2CG239100 Rh2DG242100 |
| rosa_wichuraiana | Rw2G018180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 690 |
| Acc16I | TGCGCA | 1 cut(s) | 2453 |
| Acc36I | ACCTGC | 1 cut(s) | 1040 |
| Acc65I | GGTACC | 3 cut(s) | 393, 532, 896 |
| AccB1I | GGYRCC | 4 cut(s) | 370, 393, 532, 896 |
| AciI | CCGC | 8 cut(s) | 9, 12, 15, 171, 1011, 1081, 1144, 1460 |
| AclI | AACGTT | 1 cut(s) | 75 |
| AclWI | GGATC | 6 cut(s) | 642, 655, 1379, 1721, 1793, 2479 |
| AcoI | YGGCCR | 2 cut(s) | 1145, 1942 |
| AcsI | RAATTY | 3 cut(s) | 1986, 2029, 2107 |
| AcuI | CTGAAG | 2 cut(s) | 1629, 1686 |
| AcyI | GRCGYC | 2 cut(s) | 49, 687 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 887, 907, 1940, 2067 |
| AflII | CTTAAG | 1 cut(s) | 2051 |
| AflIII | ACRYGT | 1 cut(s) | 1739 |
| AjnI | CCWGG | 3 cut(s) | 592, 775, 1147 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 480, 512 |
| Alw21I | GWGCWC | 2 cut(s) | 734, 2262 |
| Alw26I | GTCTC | 4 cut(s) | 40, 1120, 1649, 2002 |
| Alw44I | GTGCAC | 1 cut(s) | 730 |
| AlwI | GGATC | 6 cut(s) | 642, 655, 1379, 1721, 1793, 2479 |
| AoxI | GGCC | 4 cut(s) | 380, 1145, 1561, 1942 |
| ApaI | GGGCCC | 1 cut(s) | 1565 |
| ApaLI | GTGCAC | 1 cut(s) | 730 |
| ApeKI | GCWGC | 6 cut(s) | 148, 260, 436, 587, 1443, 1670 |
| ApoI | RAATTY | 3 cut(s) | 1986, 2029, 2107 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 240, 274, 1929 |
| Asp718I | GGTACC | 3 cut(s) | 393, 532, 896 |
| AspA2I | CCTAGG | 1 cut(s) | 1565 |
| AspLEI | GCGC | 2 cut(s) | 1780, 2454 |
| AspS9I | GGNCC | 4 cut(s) | 955, 1300, 1561, 1562 |
| AsuC2I | CCSGG | 1 cut(s) | 645 |
| AsuHPI | GGTGA | 6 cut(s) | 143, 374, 902, 2161, 2525, 2561 |
| AsuII | TTCGAA | 1 cut(s) | 244 |
| AvaII | GGWCC | 2 cut(s) | 955, 1300 |
| AvrII | CCTAGG | 1 cut(s) | 1565 |
| BaeGI | GKGCMC | 2 cut(s) | 734, 1565 |
| BalI | TGGCCA | 1 cut(s) | 1944 |
| BamHI | GGATCC | 1 cut(s) | 647 |
| BanI | GGYRCC | 4 cut(s) | 370, 393, 532, 896 |
| BanII | GRGCYC | 2 cut(s) | 1565, 2262 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1270, 1302, 1973, 2005 |
| BbsI | GAAGAC | 1 cut(s) | 1489 |
| Bbv12I | GWGCWC | 2 cut(s) | 734, 2262 |
| BbvCI | CCTCAGC | 2 cut(s) | 345, 440 |
| BbvI | GCAGC | 6 cut(s) | 160, 247, 448, 574, 1430, 1682 |
| BceAI | ACGGC | 2 cut(s) | 235, 768 |
| BciT130I | CCWGG | 3 cut(s) | 594, 777, 1149 |
| BclI | TGATCA | 1 cut(s) | 1465 |
| BcnI | CCSGG | 1 cut(s) | 645 |
| BcoDI | GTCTC | 4 cut(s) | 40, 1120, 1649, 2002 |
| BfaI | CTAG | 8 cut(s) | 1119, 1397, 1436, 1566, 1632, 1703, 1782, 2435 |
| BfoI | RGCGCY | 1 cut(s) | 1781 |
| BfrI | CTTAAG | 1 cut(s) | 2051 |
| BfuAI | ACCTGC | 1 cut(s) | 1040 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 379 |
| BlnI | CCTAGG | 1 cut(s) | 1565 |
| BlpI | GCTNAGC | 2 cut(s) | 765, 2256 |
| BmcAI | AGTACT | 1 cut(s) | 1606 |
| Bme1390I | CCNGG | 4 cut(s) | 594, 645, 777, 1149 |
| Bme18I | GGWCC | 2 cut(s) | 955, 1300 |
| BmgT120I | GGNCC | 4 cut(s) | 955, 1300, 1561, 1562 |
| BmrFI | CCNGG | 4 cut(s) | 594, 645, 777, 1149 |
| BmrI | ACTGGG | 2 cut(s) | 304, 2189 |
| BmuI | ACTGGG | 2 cut(s) | 304, 2189 |
| BpiI | GAAGAC | 1 cut(s) | 1489 |
| BpmI | CTGGAG | 2 cut(s) | 943, 1833 |
| Bpu10I | CCTNAGC | 2 cut(s) | 345, 440 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 765, 2256 |
| Bpu14I | TTCGAA | 1 cut(s) | 244 |
| BpuEI | CTTGAG | 3 cut(s) | 479, 638, 1821 |
| BpuMI | CCSGG | 1 cut(s) | 645 |
| BsaAI | YACGTR | 1 cut(s) | 1193 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1971 |
| BsaHI | GRCGYC | 2 cut(s) | 49, 687 |
| BsaJI | CCNNGG | 3 cut(s) | 389, 1565, 2505 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1670, 1700 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 887, 907, 1940, 2067 |
| Bse1I | ACTGG | 7 cut(s) | 310, 372, 669, 1046, 2195, 2391, 2574 |
| Bse3DI | GCAATG | 3 cut(s) | 383, 955, 1488 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1971 |
| BseBI | CCWGG | 3 cut(s) | 594, 777, 1149 |
| BseDI | CCNNGG | 3 cut(s) | 389, 1565, 2505 |
| BseJI | GATNNNNATC | 1 cut(s) | 1971 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 887, 907, 1940, 2067 |
| BseMI | GCAATG | 3 cut(s) | 383, 955, 1488 |
| BseNI | ACTGG | 7 cut(s) | 310, 372, 669, 1046, 2195, 2391, 2574 |
| BseRI | GAGGAG | 2 cut(s) | 42, 528 |
| BseSI | GKGCMC | 2 cut(s) | 734, 1565 |
| BseXI | GCAGC | 6 cut(s) | 160, 247, 448, 574, 1430, 1682 |
| BseYI | CCCAGC | 1 cut(s) | 1259 |
| BsgI | GTGCAG | 1 cut(s) | 573 |
| BshFI | GGCC | 4 cut(s) | 382, 1147, 1563, 1944 |
| BshNI | GGYRCC | 4 cut(s) | 370, 393, 532, 896 |
| BsiHKAI | GWGCWC | 2 cut(s) | 734, 2262 |
| BsiSI | CCGG | 1 cut(s) | 645 |
| BslFI | GGGAC | 2 cut(s) | 72, 863 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 887, 907, 1940, 2067 |
| BsmAI | GTCTC | 4 cut(s) | 40, 1120, 1649, 2002 |
| BsmBI | CGTCTC | 2 cut(s) | 40, 2002 |
| BsmFI | GGGAC | 2 cut(s) | 72, 863 |
| BsmI | GAATGC | 2 cut(s) | 173, 415 |
| BsnI | GGCC | 4 cut(s) | 382, 1147, 1563, 1944 |
| Bsp119I | TTCGAA | 1 cut(s) | 244 |
| Bsp120I | GGGCCC | 1 cut(s) | 1561 |
| Bsp1286I | GDGCHC | 3 cut(s) | 734, 1565, 2262 |
| Bsp1407I | TGTACA | 1 cut(s) | 2182 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 765, 2256 |
| BspACI | CCGC | 8 cut(s) | 9, 12, 15, 171, 1011, 1081, 1144, 1460 |
| BspANI | GGCC | 4 cut(s) | 382, 1147, 1563, 1944 |
| BspHI | TCATGA | 2 cut(s) | 469, 757 |
| BspMI | ACCTGC | 1 cut(s) | 1040 |
| BspPI | GGATC | 6 cut(s) | 642, 655, 1379, 1721, 1793, 2479 |
| BspT104I | TTCGAA | 1 cut(s) | 244 |
| BspT107I | GGYRCC | 4 cut(s) | 370, 393, 532, 896 |
| BspTI | CTTAAG | 1 cut(s) | 2051 |
| BsrDI | GCAATG | 3 cut(s) | 383, 955, 1488 |
| BsrGI | TGTACA | 1 cut(s) | 2182 |
| BsrI | ACTGG | 7 cut(s) | 310, 372, 669, 1046, 2195, 2391, 2574 |
| BssECI | CCNNGG | 3 cut(s) | 389, 1565, 2505 |
| BssNI | GRCGYC | 2 cut(s) | 49, 687 |
| BssT1I | CCWWGG | 3 cut(s) | 389, 1565, 2505 |
| Bst2UI | CCWGG | 3 cut(s) | 594, 777, 1149 |
| Bst4CI | ACNGT | 1 cut(s) | 1964 |
| Bst6I | CTCTTC | 3 cut(s) | 210, 342, 1976 |
| BstACI | GRCGYC | 2 cut(s) | 49, 687 |
| BstAFI | CTTAAG | 1 cut(s) | 2051 |
| BstAUI | TGTACA | 1 cut(s) | 2182 |
| BstBAI | YACGTR | 1 cut(s) | 1193 |
| BstBI | TTCGAA | 1 cut(s) | 244 |
| BstC8I | GCNNGC | 4 cut(s) | 146, 258, 434, 1521 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 905 |
| BstH2I | RGCGCY | 1 cut(s) | 1781 |
| BstHHI | GCGC | 2 cut(s) | 1780, 2454 |
| BstMAI | GTCTC | 4 cut(s) | 40, 1120, 1649, 2002 |
| BstNI | CCWGG | 3 cut(s) | 594, 777, 1149 |
| BstNSI | RCATGY | 5 cut(s) | 436, 938, 1267, 1743, 2189 |
| BstSCI | CCNGG | 4 cut(s) | 592, 643, 775, 1147 |
| BstSLI | GKGCMC | 2 cut(s) | 734, 1565 |
| BstV1I | GCAGC | 6 cut(s) | 160, 247, 448, 574, 1430, 1682 |
| BstV2I | GAAGAC | 1 cut(s) | 1489 |
| BstX2I | RGATCY | 2 cut(s) | 647, 2471 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 219, 390 |
| BstYI | RGATCY | 2 cut(s) | 647, 2471 |
| BsuRI | GGCC | 4 cut(s) | 382, 1147, 1563, 1944 |
| BtsI | GCAGTG | 2 cut(s) | 892, 2409 |
| BtsIMutI | CAGTG | 5 cut(s) | 892, 1969, 2202, 2409, 2567 |
| BveI | ACCTGC | 1 cut(s) | 1040 |
| Cac8I | GCNNGC | 4 cut(s) | 146, 258, 434, 1521 |
| CciI | TCATGA | 2 cut(s) | 469, 757 |
| CfoI | GCGC | 2 cut(s) | 1780, 2454 |
| Cfr13I | GGNCC | 4 cut(s) | 955, 1300, 1561, 1562 |
| CseI | GACGC | 2 cut(s) | 57, 74 |
| CsiI | ACCWGGT | 1 cut(s) | 592 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1826, 1861 |
| DraI | TTTAAA | 2 cut(s) | 789, 1876 |
| EaeI | YGGCCR | 2 cut(s) | 1145, 1942 |
| Eam1104I | CTCTTC | 3 cut(s) | 210, 342, 1976 |
| EarI | CTCTTC | 3 cut(s) | 210, 342, 1976 |
| EciI | GGCGGA | 1 cut(s) | 1026 |
| Ecl136II | GAGCTC | 1 cut(s) | 2260 |
| Eco130I | CCWWGG | 3 cut(s) | 389, 1565, 2505 |
| Eco24I | GRGCYC | 2 cut(s) | 1565, 2262 |
| Eco32I | GATATC | 3 cut(s) | 333, 919, 2133 |
| Eco47I | GGWCC | 2 cut(s) | 955, 1300 |
| Eco53kI | GAGCTC | 1 cut(s) | 2260 |
| Eco57I | CTGAAG | 2 cut(s) | 1629, 1686 |
| EcoICRI | GAGCTC | 1 cut(s) | 2260 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 905 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1562 |
| EcoRII | CCWGG | 3 cut(s) | 592, 775, 1147 |
| EcoRV | GATATC | 3 cut(s) | 333, 919, 2133 |
| EcoT14I | CCWWGG | 3 cut(s) | 389, 1565, 2505 |
| EcoT22I | ATGCAT | 2 cut(s) | 1369, 2191 |
| EcoT38I | GRGCYC | 2 cut(s) | 1565, 2262 |
| ErhI | CCWWGG | 3 cut(s) | 389, 1565, 2505 |
| Esp3I | CGTCTC | 2 cut(s) | 40, 2002 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2004, 2036 |
| FaqI | GGGAC | 2 cut(s) | 72, 863 |
| FauI | CCCGC | 1 cut(s) | 178 |
| FbaI | TGATCA | 1 cut(s) | 1465 |
| FriOI | GRGCYC | 2 cut(s) | 1565, 2262 |
| FspAI | RTGCGCAY | 1 cut(s) | 2453 |
| FspBI | CTAG | 8 cut(s) | 1119, 1397, 1436, 1566, 1632, 1703, 1782, 2435 |
| FspI | TGCGCA | 1 cut(s) | 2453 |
| GlaI | GCGC | 2 cut(s) | 1779, 2453 |
| GsaI | CCCAGC | 1 cut(s) | 1263 |
| GsuI | CTGGAG | 2 cut(s) | 943, 1833 |
| HaeII | RGCGCY | 1 cut(s) | 1781 |
| HaeIII | GGCC | 4 cut(s) | 382, 1147, 1563, 1944 |
| HapII | CCGG | 1 cut(s) | 645 |
| HgaI | GACGC | 2 cut(s) | 57, 74 |
| HhaI | GCGC | 2 cut(s) | 1780, 2454 |
| Hin1I | GRCGYC | 2 cut(s) | 49, 687 |
| Hin6I | GCGC | 2 cut(s) | 1778, 2452 |
| HinP1I | GCGC | 2 cut(s) | 1778, 2452 |
| HincII | GTYRAC | 2 cut(s) | 1858, 2358 |
| HindII | GTYRAC | 2 cut(s) | 1858, 2358 |
| HindIII | AAGCTT | 1 cut(s) | 482 |
| HpaII | CCGG | 1 cut(s) | 645 |
| HphI | GGTGA | 6 cut(s) | 143, 374, 902, 2161, 2525, 2561 |
| Hpy166II | GTNNAC | 7 cut(s) | 365, 732, 1024, 1287, 1858, 2200, 2358 |
| Hpy8I | GTNNAC | 7 cut(s) | 365, 732, 1024, 1287, 1858, 2200, 2358 |
| HpyAV | CCTTC | 8 cut(s) | 111, 911, 1275, 1281, 1544, 2096, 2135, 2461 |
| HpyCH4III | ACNGT | 1 cut(s) | 1964 |
| HpyCH4IV | ACGT | 6 cut(s) | 75, 556, 687, 1192, 1995, 2526 |
| HpySE526I | ACGT | 6 cut(s) | 75, 556, 687, 1192, 1995, 2526 |
| Hsp92I | GRCGYC | 2 cut(s) | 49, 687 |
| HspAI | GCGC | 2 cut(s) | 1778, 2452 |
| KpnI | GGTACC | 3 cut(s) | 397, 536, 900 |
| Ksp22I | TGATCA | 1 cut(s) | 1465 |
| LmnI | GCTCC | 7 cut(s) | 193, 821, 832, 916, 1040, 1478, 2119 |
| Lsp1109I | GCAGC | 6 cut(s) | 160, 247, 448, 574, 1430, 1682 |
| MabI | ACCWGGT | 1 cut(s) | 592 |
| MaeI | CTAG | 8 cut(s) | 1119, 1397, 1436, 1566, 1632, 1703, 1782, 2435 |
| MaeII | ACGT | 6 cut(s) | 75, 556, 687, 1192, 1995, 2526 |
| MaeIII | GTNAC | 7 cut(s) | 205, 748, 1193, 1735, 1951, 2407, 2549 |
| MfeI | CAATTG | 2 cut(s) | 611, 2415 |
| MflI | RGATCY | 2 cut(s) | 647, 2471 |
| MhlI | GDGCHC | 3 cut(s) | 734, 1565, 2262 |
| MlsI | TGGCCA | 1 cut(s) | 1944 |
| MluNI | TGGCCA | 1 cut(s) | 1944 |
| MlyI | GAGTC | 3 cut(s) | 1382, 1828, 2363 |
| MmeI | TCCRAC | 4 cut(s) | 294, 919, 2020, 2313 |
| Mox20I | TGGCCA | 1 cut(s) | 1944 |
| Mph1103I | ATGCAT | 2 cut(s) | 1369, 2191 |
| MroXI | GAANNNNTTC | 3 cut(s) | 240, 274, 1929 |
| MscI | TGGCCA | 1 cut(s) | 1944 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1224, 1338 |
| Msp20I | TGGCCA | 1 cut(s) | 1944 |
| MspA1I | CMGCKG | 1 cut(s) | 439 |
| MspCI | CTTAAG | 1 cut(s) | 2051 |
| MspI | CCGG | 1 cut(s) | 645 |
| MspR9I | CCNGG | 4 cut(s) | 594, 645, 777, 1149 |
| MunI | CAATTG | 2 cut(s) | 611, 2415 |
| Mva1269I | GAATGC | 2 cut(s) | 173, 415 |
| MvaI | CCWGG | 3 cut(s) | 594, 777, 1149 |
| NciI | CCSGG | 1 cut(s) | 645 |
| NmuCI | GTSAC | 6 cut(s) | 205, 748, 1193, 1951, 2407, 2549 |
| NsbI | TGCGCA | 1 cut(s) | 2453 |
| NsiI | ATGCAT | 2 cut(s) | 1369, 2191 |
| NspI | RCATGY | 5 cut(s) | 436, 938, 1267, 1743, 2189 |
| NspV | TTCGAA | 1 cut(s) | 244 |
| PaeI | GCATGC | 1 cut(s) | 436 |
| PagI | TCATGA | 2 cut(s) | 469, 757 |
| PciI | ACATGT | 1 cut(s) | 1739 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 55 |
| PctI | GAATGC | 2 cut(s) | 173, 415 |
| PdmI | GAANNNNTTC | 3 cut(s) | 240, 274, 1929 |
| PfeI | GAWTC | 8 cut(s) | 166, 228, 270, 403, 1042, 1712, 1925, 2336 |
| PfoI | TCCNGGA | 1 cut(s) | 775 |
| PleI | GAGTC | 3 cut(s) | 1381, 1828, 2362 |
| PpsI | GAGTC | 3 cut(s) | 1381, 1828, 2362 |
| Ppu21I | YACGTR | 1 cut(s) | 1193 |
| PscI | ACATGT | 1 cut(s) | 1739 |
| Psp124BI | GAGCTC | 1 cut(s) | 2262 |
| Psp1406I | AACGTT | 1 cut(s) | 75 |
| Psp6I | CCWGG | 3 cut(s) | 592, 775, 1147 |
| PspFI | CCCAGC | 1 cut(s) | 1259 |
| PspGI | CCWGG | 3 cut(s) | 592, 775, 1147 |
| PspOMI | GGGCCC | 1 cut(s) | 1561 |
| PspPI | GGNCC | 4 cut(s) | 955, 1300, 1561, 1562 |
| PsuI | RGATCY | 2 cut(s) | 647, 2471 |
| PvuII | CAGCTG | 1 cut(s) | 439 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1224, 1338 |
| SacI | GAGCTC | 1 cut(s) | 2262 |
| Sau96I | GGNCC | 4 cut(s) | 955, 1300, 1561, 1562 |
| ScaI | AGTACT | 1 cut(s) | 1606 |
| SchI | GAGTC | 3 cut(s) | 1382, 1828, 2363 |
| ScrFI | CCNGG | 4 cut(s) | 594, 645, 777, 1149 |
| SduI | GDGCHC | 3 cut(s) | 734, 1565, 2262 |
| SexAI | ACCWGGT | 1 cut(s) | 592 |
| SfuI | TTCGAA | 1 cut(s) | 244 |
| SinI | GGWCC | 2 cut(s) | 955, 1300 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1224, 1338 |
| SmlI | CTYRAG | 4 cut(s) | 458, 617, 1836, 2051 |
| SmoI | CTYRAG | 4 cut(s) | 458, 617, 1836, 2051 |
| SphI | GCATGC | 1 cut(s) | 436 |
| SsiI | CCGC | 8 cut(s) | 9, 12, 15, 171, 1011, 1081, 1144, 1460 |
| SspI | AATATT | 1 cut(s) | 185 |
| SspMI | CTAG | 8 cut(s) | 1119, 1397, 1436, 1566, 1632, 1703, 1782, 2435 |
| SstI | GAGCTC | 1 cut(s) | 2262 |
| StyD4I | CCNGG | 4 cut(s) | 592, 643, 775, 1147 |
| StyI | CCWWGG | 3 cut(s) | 389, 1565, 2505 |
| TaaI | ACNGT | 1 cut(s) | 1964 |
| TaiI | ACGT | 6 cut(s) | 78, 559, 690, 1195, 1998, 2529 |
| TaqI | TCGA | 2 cut(s) | 177, 244 |
| TaqII | GACCGA | 1 cut(s) | 2252 |
| TatI | WGTACW | 3 cut(s) | 571, 1604, 2182 |
| TauI | GCSGC | 5 cut(s) | 12, 15, 18, 1147, 1462 |
| TfiI | GAWTC | 8 cut(s) | 166, 228, 270, 403, 1042, 1712, 1925, 2336 |
| TscAI | CASTG | 5 cut(s) | 892, 1969, 2202, 2416, 2574 |
| TseFI | GTSAC | 6 cut(s) | 205, 748, 1193, 1951, 2407, 2549 |
| TseI | GCWGC | 6 cut(s) | 148, 260, 436, 587, 1443, 1670 |
| Tsp45I | GTSAC | 6 cut(s) | 205, 748, 1193, 1951, 2407, 2549 |
| TspGWI | ACGGA | 3 cut(s) | 47, 1313, 1723 |
| TspRI | CASTG | 5 cut(s) | 892, 1969, 2202, 2416, 2574 |
| Vha464I | CTTAAG | 1 cut(s) | 2051 |
| VneI | GTGCAC | 1 cut(s) | 730 |
| VpaK11BI | GGWCC | 2 cut(s) | 955, 1300 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 905 |
| XapI | RAATTY | 3 cut(s) | 1986, 2029, 2107 |
| XceI | RCATGY | 5 cut(s) | 436, 938, 1267, 1743, 2189 |
| XmaJI | CCTAGG | 1 cut(s) | 1565 |
| XmnI | GAANNNNTTC | 3 cut(s) | 240, 274, 1929 |
| XspI | CTAG | 8 cut(s) | 1119, 1397, 1436, 1566, 1632, 1703, 1782, 2435 |
| ZraI | GACGTC | 1 cut(s) | 688 |
| ZrmI | AGTACT | 1 cut(s) | 1606 |
| Zsp2I | ATGCAT | 2 cut(s) | 1369, 2191 |