RLG00000017986
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
24062699 .. 24069446
6748 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017986

Sequence Viewer

Length: 2532 bp
ATGGGCAGAGGCAGAGGAGGTTCACGCACTCAGAGACGCCACTTCCGTCAGAACAGAGAGAACGTCTGGAAGCGCACCAAGCCCGATCCTTCCTCTGAAAACAATGGCGCCGCCGCCGACGACCCTTCTTGGCAGCCCTTTGCTACCCAAAACCCATCATTCGAGGAGTACTATAAGGAGCAAGGGATAGTTGCCCCAGAAGAGTGGGATTTGTTCATGGAAGTTCTTCGAAAGCCGTTGCCGGCTGCTTTTAGGATCAATTCAAGTAGCCAGTTTTGTTCCGATATCCGAACCCAGTTGGAGACTGATTTTATGATATCTCTTCAAGCTGAGGTGAGTGAAGGGGGTGAACCGCAGCCTATCCGGCCATTGCCTTGGTACCCTGAGAATCTTGCTTGGCAGTCAAATTTTTCTCGCATGCAGCTGAGGAAGAACCAAACTCTTGAGAGGTTTCATGAATTTTTAAAGCTTGAAAATGAGATTGGAAACATCACAAGACAGGAGGCTGTCAGCATGGTGCCTCCTCTATTCCTTGATGTACGTCCAGAACATTTTATACTTGATATGTGTGCTGCACCAGGTTCAAAAACATTCCAATTGCTTGAGATTATACACAGATCAACAAAACCAGGACTCCTACCTGATGGATTGGTTGTAGCAAATGATCTTGACGTTCAAAGGTGCAATCTACTCATCCATCAAACAAAAAGAATGTGCACAGCTAACTTGATAGTCACAAACCATGAAGCTCAGCACTTCCCTGGCTGCCGTTCACAAAAAAAAAGCTCTAGTGCTTCTGAAATAGGAGCTGAATTGGAGCCACCCATTCGTCAACTTCTCTTTGATCGTGTTTTATGTGATGTCCCTTGTAGTGGCGATGGTACCCTCCGCAAGGCTCCTGATATCTGGAGGAAATGGCATGCAGGTAATGGCAATGGGCTGCATGCTCTACAAGTTCAGATAGCTATGCGAGGTTTGTCTTTGCTTAAAGTTGGTGGAAGAATGGTTTATTCTACCTGCTCTATGAATCCAGTTGAGAATGAGGCTGTGATTTCTGAGATTTTGAGGAAATGTGGTGGATCTGTTGAGCTTATTGACGTCTCTAATGAGCTTCCTCAACTTGTCAGGCGGCCAGGTCTTAAAAAATGGAAGGTACGTGACAAGGGTCGATGGTTAGTTTCCTCTAAAGATGTAGGCAAATATCGCACAAATGCCATTGTCCCTGGCATGTTTCCATCTGGAAGAAGCCTTGCAGTATCAATGGACCACAGTGGTAGTATGGATCAGGAAGAAAAGCAGGAGAATGGTGAATATGGAAATGTTGAAGATGCATTGCAGTCAAGTGAGGATGCTGTAATTTCAGCCAGTGAAGTAGACGAGGAAGTTTCTTCGTTTCCACTAGAACGTTGCATGAGGATAGTCCCACATGATCAAAATGGTGGAGCTTTCTTCATTGCAGTCCTCCACAAGCATTCCCCTTTGCCAGCCAATCAGGGGACAGCTTGTCCTGAAGGTGACTTGTGCTCTACAACTGACGAGCTGATTGTAAAATTACCAACTCAGGATACTGAAGGTACAAATGGGTTGCTAGCTAATTTGGCAGATGATACGGATGAGACAACTACAGAAGCTGCCTCAGAGGCAGAGTTAATTGAGGTTGAACAAGAGGGGCTTACTTTGGAACCCGATACTACCATAACGAGTGAAGAAAATGTATCAGAGGCAAACCAAGTGCCTGGTGATGTGGAAGCTGATCCAAAGAAAACTCGAGGAAAAAGAAAGCAGCTTCAAGGCAAGTGGAAAGGAGTTGACCCTGTTGTATTCTTTAAAGATGAAGCTGTCATCAATGCCATAAAGACATTTTATGGAATTGATGAATCATTTCCATTCGACGGCCACCTTGTCACAAGAAATAGTGATACCAATCATGTGAAGAGAATTTACTACGTCTCAAAGCCAGTCAAAGATGTTCTTGAACTGAATTTCTCTGTTGGAGAGCAACTTAAGATAACATCCATTGGGCTTAAGATGTTTGAACGACAAACTGCAAGTGTTGCAAGTTGTGCACCTTGTGCATTCCGGATATCATCTGAAGGATTGCCTCTTATTCTTCCGTACATCACCAAGCAGATTCTATATGCATCCCCAGTGGACTTCAAGCATATTCTTCAATATAAAAGTATCAAGTTTTCTGATTTTGTTGATGCTGAGTTCGGTGTGAAGGCATCAGCTTTAATGCTAGGGTGCTGTGTGTTAGTTTTGAGCAAAGGTGGCAAAACCTCGTCAGATCCTATTCAGGTAGACGAGTCAACAATAGCCATTGGATGCTGGAAAGGTAGGAACAGTTTGTCTGTGATGGTCACTGCACTCGACTGCCAAGAACTGCTTGAAAGGCTTTTGATGCGCATTGAACCTGGAAATGGAAATTTGGAGAGTAAAGACGAGTCTTCTAATGGTAAGGGGGATGTGGACATGAAGGATGTGGAAAAGAACGGTGACAAGGAAAGTACCACAGCAGCAGCCGAGGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

844

Amino Acids

93.46

Weight (kDa)

5.28

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltr_RsmB-F PF01189 177 - 358 3.5e-34 16S rRNA methyltransferase RsmB/F
Pre-PUA_NSUN2 PF25376 605 - 708 2.2e-34 NSUN2 Pre-PUA domain
PUA_NSUN2 PF25378 710 - 800 3.3e-27 NSUN2 PUA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1101
Acc16I TGCGCA 1 cut(s) 2405
Acc36I ACCTGC 2 cut(s) 914, 1025
Acc65I GGTACC 2 cut(s) 378, 881
AccB1I GGYRCC 4 cut(s) 107, 378, 517, 881
AccI GTMKAC 2 cut(s) 1374, 2301
AccIII TCCGGA 1 cut(s) 2079
AciI CCGC 5 cut(s) 111, 114, 353, 889, 1129
AclI AACGTT 1 cut(s) 1405
AclWI GGATC 6 cut(s) 80, 263, 1087, 1290, 1748, 2282
AcoI YGGCCR 3 cut(s) 365, 1130, 1894
AcsI RAATTY 5 cut(s) 406, 458, 1938, 1981, 2425
AcuI CTGAAG 3 cut(s) 1530, 1590, 2112
AcyI GRCGYC 3 cut(s) 37, 108, 1098
AdeI CACNNNGTG 1 cut(s) 2072
AfaI GTAC 8 cut(s) 170, 380, 540, 883, 1155, 1576, 2117, 2509
AfiI CCNNNNNNNGG 5 cut(s) 872, 892, 1494, 1892, 2420
AflII CTTAAG 2 cut(s) 2003, 2024
AhdI GACNNNNNGTC 1 cut(s) 1503
AjnI CCWGG 7 cut(s) 577, 628, 760, 1132, 1222, 1735, 2413
AjuI GAANNNNNNNTTGG 2 cut(s) 465, 497
Alw21I GWGCWC 3 cut(s) 719, 1526, 2068
Alw26I GTCTC 5 cut(s) 28, 296, 1105, 1610, 1954
Alw44I GTGCAC 2 cut(s) 715, 2064
AlwI GGATC 6 cut(s) 80, 263, 1087, 1290, 1748, 2282
AlwNI CAGNNNCTG 1 cut(s) 1631
Ama87I CYCGRG 1 cut(s) 1767
Aor13HI TCCGGA 1 cut(s) 2079
AoxI GGCC 3 cut(s) 365, 1130, 1894
ApaLI GTGCAC 2 cut(s) 715, 2064
ApoI RAATTY 5 cut(s) 406, 458, 1938, 1981, 2425
Asp700I GAANNNNTTC 2 cut(s) 225, 1881
Asp718I GGTACC 2 cut(s) 378, 881
AspLEI GCGC 3 cut(s) 75, 110, 2406
AspS9I GGNCC 1 cut(s) 1264
AsuHPI GGTGA 7 cut(s) 346, 359, 1319, 1526, 1751, 2113, 2507
AsuII TTCGAA 1 cut(s) 229
AsuNHI GCTAGC 1 cut(s) 1588
AvaI CYCGRG 1 cut(s) 1767
AvaII GGWCC 1 cut(s) 1264
BaeGI GKGCMC 2 cut(s) 719, 2068
BanI GGYRCC 4 cut(s) 107, 378, 517, 881
BarI GAAGNNNNNNTAC 2 cut(s) 1925, 1957
BbsI GAAGAC 1 cut(s) 2439
Bbv12I GWGCWC 3 cut(s) 719, 1526, 2068
BbvCI CCTCAGC 2 cut(s) 330, 425
BccI CCATC 7 cut(s) 163, 638, 705, 872, 1164, 1243, 2350
BceAI ACGGC 3 cut(s) 220, 753, 1909
BciT130I CCWGG 7 cut(s) 579, 630, 762, 1134, 1224, 1737, 2415
BciVI GTATCC 1 cut(s) 1558
BclI TGATCA 1 cut(s) 1429
BcoDI GTCTC 5 cut(s) 28, 296, 1105, 1610, 1954
BfaI CTAG 4 cut(s) 789, 1400, 1589, 2240
BfmI CTRYAG 1 cut(s) 1623
BfoI RGCGCY 1 cut(s) 111
BfrI CTTAAG 2 cut(s) 2003, 2024
BfuAI ACCTGC 2 cut(s) 914, 1025
BfuI GTATCC 1 cut(s) 1558
BglI GCCNNNNNGGC 2 cut(s) 364, 1640
BlpI GCTNAGC 1 cut(s) 750
BmcAI AGTACT 1 cut(s) 170
Bme1390I CCNGG 7 cut(s) 579, 630, 762, 1134, 1224, 1737, 2415
Bme18I GGWCC 1 cut(s) 1264
BmeRI GACNNNNNGTC 1 cut(s) 1503
BmeT110I CYCGRG 1 cut(s) 1767
BmgT120I GGNCC 1 cut(s) 1264
BmiI GGNNCC 7 cut(s) 109, 380, 519, 819, 883, 897, 1683
BmrFI CCNGG 7 cut(s) 579, 630, 762, 1134, 1224, 1737, 2415
BmrI ACTGGG 2 cut(s) 289, 2141
BmsI GCATC 7 cut(s) 1318, 1339, 2150, 2194, 2234, 2315, 2391
BmtI GCTAGC 1 cut(s) 1592
BmuI ACTGGG 2 cut(s) 289, 2141
BoxI GACNNNNGTC 1 cut(s) 1164
BpiI GAAGAC 1 cut(s) 2439
BpmI CTGGAG 1 cut(s) 928
Bpu10I CCTNAGC 2 cut(s) 330, 425
Bpu1102I GCTNAGC 1 cut(s) 750
Bpu14I TTCGAA 1 cut(s) 229
BpuEI CTTGAG 2 cut(s) 464, 623
BsaAI YACGTR 1 cut(s) 1157
BsaBI GATNNNNATC 1 cut(s) 1923
BsaHI GRCGYC 3 cut(s) 37, 108, 1098
BsaJI CCNNGG 4 cut(s) 374, 760, 1222, 2523
BsaWI WCCGGW 1 cut(s) 2079
BsaXI ACNNNNNCTCC 2 cut(s) 618, 648
Bsc4I CCNNNNNNNGG 5 cut(s) 872, 892, 1494, 1892, 2420
Bse118I RCCGGY 1 cut(s) 241
Bse1I ACTGG 6 cut(s) 271, 295, 1031, 1365, 1958, 2147
Bse3DI GCAATG 4 cut(s) 368, 940, 1331, 1452
Bse8I GATNNNNATC 1 cut(s) 1923
BseAI TCCGGA 1 cut(s) 2079
BseBI CCWGG 7 cut(s) 579, 630, 762, 1134, 1224, 1737, 2415
BseDI CCNNGG 4 cut(s) 374, 760, 1222, 2523
BseGI GGATG 8 cut(s) 693, 1354, 1618, 2012, 2141, 2330, 2470, 2485
BseJI GATNNNNATC 1 cut(s) 1923
BseLI CCNNNNNNNGG 5 cut(s) 872, 892, 1494, 1892, 2420
BseMI GCAATG 4 cut(s) 368, 940, 1331, 1452
BseMII CTCAG 9 cut(s) 44, 321, 375, 416, 764, 1047, 1574, 1650, 2199
BseNI ACTGG 6 cut(s) 271, 295, 1031, 1365, 1958, 2147
BseRI GAGGAG 3 cut(s) 30, 179, 513
BseSI GKGCMC 2 cut(s) 719, 2068
BsgI GTGCAG 2 cut(s) 558, 2349
BshFI GGCC 3 cut(s) 367, 1132, 1896
BshNI GGYRCC 4 cut(s) 107, 378, 517, 881
BsiHKAI GWGCWC 3 cut(s) 719, 1526, 2068
BsiHKCI CYCGRG 1 cut(s) 1767
BsiSI CCGG 3 cut(s) 242, 364, 2080
BslFI GGGAC 4 cut(s) 848, 1205, 1406, 1510
BslI CCNNNNNNNGG 5 cut(s) 872, 892, 1494, 1892, 2420
BsmAI GTCTC 5 cut(s) 28, 296, 1105, 1610, 1954
BsmBI CGTCTC 3 cut(s) 28, 1105, 1954
BsmFI GGGAC 4 cut(s) 848, 1205, 1406, 1510
BsmI GAATGC 2 cut(s) 1471, 2075
BsnI GGCC 3 cut(s) 367, 1132, 1896
BsoBI CYCGRG 1 cut(s) 1767
Bsp119I TTCGAA 1 cut(s) 229
Bsp1286I GDGCHC 3 cut(s) 719, 1526, 2068
Bsp13I TCCGGA 1 cut(s) 2079
Bsp1720I GCTNAGC 1 cut(s) 750
BspACI CCGC 5 cut(s) 111, 114, 353, 889, 1129
BspANI GGCC 3 cut(s) 367, 1132, 1896
BspCNI CTCAG 9 cut(s) 43, 322, 376, 417, 763, 1048, 1573, 1649, 2200
BspEI TCCGGA 1 cut(s) 2079
BspHI TCATGA 1 cut(s) 454
BspLI GGNNCC 7 cut(s) 109, 380, 519, 819, 883, 897, 1683
BspMI ACCTGC 2 cut(s) 914, 1025
BspOI GCTAGC 1 cut(s) 1592
BspPI GGATC 6 cut(s) 80, 263, 1087, 1290, 1748, 2282
BspT104I TTCGAA 1 cut(s) 229
BspT107I GGYRCC 4 cut(s) 107, 378, 517, 881
BspTI CTTAAG 2 cut(s) 2003, 2024
BsrDI GCAATG 4 cut(s) 368, 940, 1331, 1452
BsrFI RCCGGY 1 cut(s) 241
BsrI ACTGG 6 cut(s) 271, 295, 1031, 1365, 1958, 2147
BssAI RCCGGY 1 cut(s) 241
BssECI CCNNGG 4 cut(s) 374, 760, 1222, 2523
BssNI GRCGYC 3 cut(s) 37, 108, 1098
BssT1I CCWWGG 1 cut(s) 374
Bst2UI CCWGG 7 cut(s) 579, 630, 762, 1134, 1224, 1737, 2415
Bst4CI ACNGT 3 cut(s) 1271, 2345, 2495
Bst6I CTCTTC 3 cut(s) 195, 327, 1928
BstACI GRCGYC 3 cut(s) 37, 108, 1098
BstAFI CTTAAG 2 cut(s) 2003, 2024
BstAPI GCANNNNNTGC 3 cut(s) 2054, 2063, 2072
BstBAI YACGTR 1 cut(s) 1157
BstBI TTCGAA 1 cut(s) 229
BstC8I GCNNGC 6 cut(s) 243, 419, 921, 945, 1485, 1590
BstDEI CTNAG 9 cut(s) 30, 330, 384, 425, 750, 1056, 1560, 1636, 2208
BstENI CCTNNNNNAGG 1 cut(s) 890
BstF5I GGATG 8 cut(s) 693, 1354, 1618, 2012, 2141, 2330, 2470, 2485
BstH2I RGCGCY 1 cut(s) 111
BstHHI GCGC 3 cut(s) 75, 110, 2406
BstMAI GTCTC 5 cut(s) 28, 296, 1105, 1610, 1954
BstNI CCWGG 7 cut(s) 579, 630, 762, 1134, 1224, 1737, 2415
BstNSI RCATGY 4 cut(s) 421, 923, 947, 1231
BstPAI GACNNNNGTC 1 cut(s) 1164
BstSCI CCNGG 7 cut(s) 577, 628, 760, 1132, 1222, 1735, 2413
BstSFI CTRYAG 1 cut(s) 1623
BstSLI GKGCMC 2 cut(s) 719, 2068
BstV2I GAAGAC 1 cut(s) 2439
BstX2I RGATCY 2 cut(s) 1079, 2287
BstXI CCANNNNNNTGG 3 cut(s) 204, 375, 1736
BstYI RGATCY 2 cut(s) 1079, 2287
BsuI GTATCC 1 cut(s) 1558
BsuRI GGCC 3 cut(s) 367, 1132, 1896
BtgZI GCGATG 1 cut(s) 891
BtsCI GGATG 8 cut(s) 693, 1354, 1618, 2012, 2141, 2330, 2470, 2485
BtsI GCAGTG 1 cut(s) 2361
BtsIMutI CAGTG 4 cut(s) 1276, 1372, 2154, 2361
BveI ACCTGC 2 cut(s) 914, 1025
Cac8I GCNNGC 6 cut(s) 243, 419, 921, 945, 1485, 1590
CaiI CAGNNNCTG 1 cut(s) 1631
CciI TCATGA 1 cut(s) 454
CfoI GCGC 3 cut(s) 75, 110, 2406
Cfr10I RCCGGY 1 cut(s) 241
Cfr13I GGNCC 1 cut(s) 1264
CseI GACGC 1 cut(s) 45
CsiI ACCWGGT 1 cut(s) 577
Csp6I GTAC 8 cut(s) 169, 379, 539, 882, 1154, 1575, 2116, 2508
CspCI CAANNNNNGTGG 2 cut(s) 1778, 1813
CviQI GTAC 8 cut(s) 169, 379, 539, 882, 1154, 1575, 2116, 2508
DdeI CTNAG 9 cut(s) 30, 330, 384, 425, 750, 1056, 1560, 1636, 2208
DinI GGCGCC 1 cut(s) 109
DraI TTTAAA 2 cut(s) 465, 1828
DraIII CACNNNGTG 1 cut(s) 2072
DriI GACNNNNNGTC 1 cut(s) 1503
EaeI YGGCCR 3 cut(s) 365, 1130, 1894
Eam1104I CTCTTC 3 cut(s) 195, 327, 1928
Eam1105I GACNNNNNGTC 1 cut(s) 1503
EarI CTCTTC 3 cut(s) 195, 327, 1928
Eco130I CCWWGG 1 cut(s) 374
Eco32I GATATC 4 cut(s) 286, 318, 904, 2085
Eco47I GGWCC 1 cut(s) 1264
Eco57I CTGAAG 3 cut(s) 1530, 1590, 2112
Eco88I CYCGRG 1 cut(s) 1767
EcoNI CCTNNNNNAGG 1 cut(s) 890
EcoRII CCWGG 7 cut(s) 577, 628, 760, 1132, 1222, 1735, 2413
EcoRV GATATC 4 cut(s) 286, 318, 904, 2085
EcoT14I CCWWGG 1 cut(s) 374
EcoT22I ATGCAT 2 cut(s) 1333, 2143
EgeI GGCGCC 1 cut(s) 109
EheI GGCGCC 1 cut(s) 109
ErhI CCWWGG 1 cut(s) 374
Esp3I CGTCTC 3 cut(s) 28, 1105, 1954
FalI AAGNNNNNCTT 6 cut(s) 1656, 1688, 1956, 1988, 2370, 2402
FaqI GGGAC 4 cut(s) 848, 1205, 1406, 1510
FbaI TGATCA 1 cut(s) 1429
FblI GTMKAC 2 cut(s) 1374, 2301
FokI GGATG 8 cut(s) 680, 1361, 1625, 1999, 2128, 2337, 2477, 2492
FspAI RTGCGCAY 1 cut(s) 2405
FspBI CTAG 4 cut(s) 789, 1400, 1589, 2240
FspI TGCGCA 1 cut(s) 2405
GlaI GCGC 3 cut(s) 74, 109, 2405
GsuI CTGGAG 1 cut(s) 928
HaeII RGCGCY 1 cut(s) 111
HaeIII GGCC 3 cut(s) 367, 1132, 1896
HapII CCGG 3 cut(s) 242, 364, 2080
HgaI GACGC 1 cut(s) 45
HhaI GCGC 3 cut(s) 75, 110, 2406
Hin1I GRCGYC 3 cut(s) 37, 108, 1098
Hin6I GCGC 3 cut(s) 73, 108, 2404
HinP1I GCGC 3 cut(s) 73, 108, 2404
HincII GTYRAC 3 cut(s) 833, 1810, 2310
HindII GTYRAC 3 cut(s) 833, 1810, 2310
HindIII AAGCTT 1 cut(s) 467
HinfI GANTC 7 cut(s) 388, 633, 1027, 1877, 2131, 2306, 2444
HpaII CCGG 3 cut(s) 242, 364, 2080
HphI GGTGA 7 cut(s) 346, 359, 1319, 1526, 1751, 2113, 2507
Hpy99I CGWCG 2 cut(s) 122, 1895
HpyAV CCTTC 9 cut(s) 99, 135, 335, 1144, 1505, 1565, 2087, 2215, 2470
HpyCH4III ACNGT 3 cut(s) 1271, 2345, 2495
HpyCH4IV ACGT 7 cut(s) 63, 541, 672, 1098, 1156, 1405, 1947
HpyF3I CTNAG 9 cut(s) 30, 330, 384, 425, 750, 1056, 1560, 1636, 2208
HpySE526I ACGT 7 cut(s) 63, 541, 672, 1098, 1156, 1405, 1947
Hsp92I GRCGYC 3 cut(s) 37, 108, 1098
HspAI GCGC 3 cut(s) 73, 108, 2404
KasI GGCGCC 1 cut(s) 107
Kpn2I TCCGGA 1 cut(s) 2079
KpnI GGTACC 2 cut(s) 382, 885
KroI GCCGGC 1 cut(s) 241
KroNI GCCGGC 1 cut(s) 243
Ksp22I TGATCA 1 cut(s) 1429
LmnI GCTCC 5 cut(s) 178, 806, 817, 901, 1442
LweI GCATC 7 cut(s) 1318, 1339, 2150, 2194, 2234, 2315, 2391
MabI ACCWGGT 1 cut(s) 577
MaeI CTAG 4 cut(s) 789, 1400, 1589, 2240
MaeII ACGT 7 cut(s) 63, 541, 672, 1098, 1156, 1405, 1947
MaeIII GTNAC 6 cut(s) 733, 1157, 1514, 1903, 2359, 2495
MfeI CAATTG 1 cut(s) 596
MflI RGATCY 2 cut(s) 1079, 2287
MhlI GDGCHC 3 cut(s) 719, 1526, 2068
Mly113I GGCGCC 1 cut(s) 108
MlyI GAGTC 3 cut(s) 627, 2315, 2453
MmeI TCCRAC 2 cut(s) 279, 1972
Mph1103I ATGCAT 2 cut(s) 1333, 2143
MroI TCCGGA 1 cut(s) 2079
MroNI GCCGGC 1 cut(s) 241
MroXI GAANNNNTTC 2 cut(s) 225, 1881
MseI TTAA 8 cut(s) 464, 987, 1140, 1649, 1827, 2004, 2025, 2234
MspA1I CMGCKG 1 cut(s) 424
MspCI CTTAAG 2 cut(s) 2003, 2024
MspI CCGG 3 cut(s) 242, 364, 2080
MspR9I CCNGG 7 cut(s) 579, 630, 762, 1134, 1224, 1737, 2415
MunI CAATTG 1 cut(s) 596
Mva1269I GAATGC 2 cut(s) 1471, 2075
MvaI CCWGG 7 cut(s) 579, 630, 762, 1134, 1224, 1737, 2415
NaeI GCCGGC 1 cut(s) 243
NarI GGCGCC 1 cut(s) 108
NgoMIV GCCGGC 1 cut(s) 241
NheI GCTAGC 1 cut(s) 1588
NlaIV GGNNCC 7 cut(s) 109, 380, 519, 819, 883, 897, 1683
NmuCI GTSAC 6 cut(s) 733, 1157, 1514, 1903, 2359, 2495
NsbI TGCGCA 1 cut(s) 2405
NsiI ATGCAT 2 cut(s) 1333, 2143
NspI RCATGY 4 cut(s) 421, 923, 947, 1231
NspV TTCGAA 1 cut(s) 229
PaeI GCATGC 3 cut(s) 421, 923, 947
PaeR7I CTCGAG 1 cut(s) 1767
PagI TCATGA 1 cut(s) 454
PcsI WCGNNNNNNNCGW 1 cut(s) 43
PctI GAATGC 2 cut(s) 1471, 2075
PdiI GCCGGC 1 cut(s) 243
PdmI GAANNNNTTC 2 cut(s) 225, 1881
PfeI GAWTC 4 cut(s) 388, 1027, 1877, 2131
PleI GAGTC 3 cut(s) 627, 2314, 2452
PluTI GGCGCC 1 cut(s) 111
PpsI GAGTC 3 cut(s) 627, 2314, 2452
Ppu21I YACGTR 1 cut(s) 1157
PshAI GACNNNNGTC 1 cut(s) 1164
Psp1406I AACGTT 1 cut(s) 1405
Psp6I CCWGG 7 cut(s) 577, 628, 760, 1132, 1222, 1735, 2413
PspGI CCWGG 7 cut(s) 577, 628, 760, 1132, 1222, 1735, 2413
PspN4I GGNNCC 7 cut(s) 109, 380, 519, 819, 883, 897, 1683
PspPI GGNCC 1 cut(s) 1264
PspXI VCTCGAGB 1 cut(s) 1767
PsrI GAACNNNNNNTAC 2 cut(s) 540, 572
PstNI CAGNNNCTG 1 cut(s) 1631
PsuI RGATCY 2 cut(s) 1079, 2287
PvuII CAGCTG 1 cut(s) 424
RsaI GTAC 8 cut(s) 170, 380, 540, 883, 1155, 1576, 2117, 2509
RsaNI GTAC 8 cut(s) 169, 379, 539, 882, 1154, 1575, 2116, 2508
SaqAI TTAA 8 cut(s) 464, 987, 1140, 1649, 1827, 2004, 2025, 2234
Sau96I GGNCC 1 cut(s) 1264
ScaI AGTACT 1 cut(s) 170
SchI GAGTC 3 cut(s) 627, 2315, 2453
ScrFI CCNGG 7 cut(s) 579, 630, 762, 1134, 1224, 1737, 2415
SduI GDGCHC 3 cut(s) 719, 1526, 2068
SexAI ACCWGGT 1 cut(s) 577
SfaNI GCATC 7 cut(s) 1318, 1339, 2150, 2194, 2234, 2315, 2391
SfcI CTRYAG 1 cut(s) 1623
SfoI GGCGCC 1 cut(s) 109
Sfr274I CTCGAG 1 cut(s) 1767
SfuI TTCGAA 1 cut(s) 229
SinI GGWCC 1 cut(s) 1264
SlaI CTCGAG 1 cut(s) 1767
SmlI CTYRAG 5 cut(s) 443, 602, 1767, 2003, 2024
SmoI CTYRAG 5 cut(s) 443, 602, 1767, 2003, 2024
SphI GCATGC 3 cut(s) 421, 923, 947
SsiI CCGC 5 cut(s) 111, 114, 353, 889, 1129
SspDI GGCGCC 1 cut(s) 107
SspMI CTAG 4 cut(s) 789, 1400, 1589, 2240
StyD4I CCNGG 7 cut(s) 577, 628, 760, 1132, 1222, 1735, 2413
StyI CCWWGG 1 cut(s) 374
TaaI ACNGT 3 cut(s) 1271, 2345, 2495
TaiI ACGT 7 cut(s) 66, 544, 675, 1101, 1159, 1408, 1950
TaqI TCGA 6 cut(s) 162, 229, 1168, 1768, 1890, 2370
TatI WGTACW 1 cut(s) 168
TauI GCSGC 3 cut(s) 113, 116, 1132
TfiI GAWTC 4 cut(s) 388, 1027, 1877, 2131
Tru1I TTAA 8 cut(s) 464, 987, 1140, 1649, 1827, 2004, 2025, 2234
Tru9I TTAA 8 cut(s) 464, 987, 1140, 1649, 1827, 2004, 2025, 2234
TscAI CASTG 4 cut(s) 1276, 1372, 2154, 2368
TseFI GTSAC 6 cut(s) 733, 1157, 1514, 1903, 2359, 2495
Tsp45I GTSAC 6 cut(s) 733, 1157, 1514, 1903, 2359, 2495
TspDTI ATGAA 9 cut(s) 205, 443, 471, 759, 1040, 1441, 1848, 1890, 2489
TspGWI ACGGA 3 cut(s) 35, 1625, 2103
TspRI CASTG 4 cut(s) 1276, 1372, 2154, 2368
Vha464I CTTAAG 2 cut(s) 2003, 2024
VneI GTGCAC 2 cut(s) 715, 2064
VpaK11BI GGWCC 1 cut(s) 1264
XagI CCTNNNNNAGG 1 cut(s) 890
XapI RAATTY 5 cut(s) 406, 458, 1938, 1981, 2425
XceI RCATGY 4 cut(s) 421, 923, 947, 1231
XhoI CTCGAG 1 cut(s) 1767
XmiI GTMKAC 2 cut(s) 1374, 2301
XmnI GAANNNNTTC 2 cut(s) 225, 1881
XspI CTAG 4 cut(s) 789, 1400, 1589, 2240
ZraI GACGTC 1 cut(s) 1099
ZrmI AGTACT 1 cut(s) 170
Zsp2I ATGCAT 2 cut(s) 1333, 2143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.