Prupe.6G223600_v2.0.a1

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0007199
Physical Location & Seq
Reverse (-)
22860650 .. 22864032
3383 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G223600.2

Sequence Viewer

Length: 1875 bp
ATGGCGGATATCGATCGTGGGGAAAGTACTGCTGCACCCACCACTGCCAACATGACTTCTAAGAAGAAAGAGCTTCTTTCTTCTGCCTTGAAGAGAACCAGTGAATGGATTTTTTCTCAGGAGATACCCAGTGATGTTAATATTCATGTTGGAGGAGTTTCCTTCTCATTGCATAAGTTTCCTTTAATTTCGAAGTGTGGATATATAAGGAAACTGATATCAGAATCGAGTGATGCTGATCTATCTGTCATTGAACTACCTGATGTTCCGGGTGGAGCAGAAGCATTTGAACTTGCAGCAAAATTCTGTTATGGAATAAATTTTGAGATAAGTACAGAAAACATTGCAATGCTGCGATGCGTGGCAGAGTATCTTGTGATGACTGAGGACAATGCAGTTGGAAACCTTGTGGGAAGAACTGATGCCTACTTGAATGAAGTGGCGCTAAAGAGCCTAGCAGGTGCAGTTTCTGTTTTACACATTTCAGAGAGCTTTCTCCCAATGGCAGAGAAAGTGAAATTGGTCAGCCGATGCATCGATGCAATTGCTCTTATAGTCTGCAAAGAGAACCAGTTCTGCGTGTCTGGTATGGGAGATAGTGTAAATGAAAGTGCGGTTTCTTCAGCAGTGTATCATTCAAAACCTGTTGTTGATTGGTGGGCTGAAGATTTAACTGTTCTTAGAATTGATATCTTCCAAAGGGTTCTTATTGCAATGATGGCAAGAGGGTTTAAACAATATGCTCTGGGACCAGTACTCATGCTCTATGCACAGAAATCTCTACGAGGTTTGGAACTATTTGGAAAGGGGAGGAAGAAAATTGAGCCACGACAAGAGCACGAGAAGAGGGTTGTCTTAGAAACAATAGTTAGTCTTCTGCCAAAGGAGAAAAATGCAATGTCAGTCAGCTTTCTTTCTATGCTGCTTCGCGCTGCAAAAACTCTCGAGACAACAGTTGCTTGCCACCTAGATTTGGAGAAGAGAATGGGCATGCAATTGGCTCAGGCTGTTTTAGATGATCTCTTGATTCCCTCATATTCCTTTACTGGGGACACGTTGTTTGATGTGGACACTGTGCAAAGGATCATGTCAAATTACCTTGAGTATGAAACGGAGGGAAGCCATTTGCTCTATAATGCAGAGGATGAGTATGTTTCCCCTCCACAGACCGACATGGAACGAGTTGGAAAGCTAATGGAGAACTACCTTGCTGAAATCGCCACAGACCGTAATGTATCTGTCTCAAAGTTTATTGGCATTGCTGAACTTGTTCCAGAACAATCGAGGGCAACAGAAGATGGGATGTATAGAGCCGTAGATATCTACCTAAAGGCTCATCCTGCTCTAAGTGACATGGAGAGAAAGAAAGTCTGCAGCATGATGGATTGCCAGAAGCTTTCCCGTGAAGCCTGTGCTCATGCTGCTCAGAATGATCGCCTTCCTGTTCAAACCGTGGTCCAAGTTCTATACTATGAGCAGCAACGCCTTCGAGACGTCATGAATGGCAATCTCATAGGTGGTGAATCCTCTGTTCTTCCTTCCAAAGGGAACTTGTACTCCACTGACATCCACCCAGTTCCTGATGAGCTCTCCATCTTACGTAGACAAAACGAGGAGCTGAAAATAGAGTTGGTGAAAATGAAAAAGAGACTGAAAGAACTTGAAACATCAACTGTGAGAACATCAATAAGCAGTCCAATGGGAAACATTTCAACATCTGCTGATAAACCTCCTCTGCCTCGAAAATCATTTATAAACTCGGTGTCAAAAAAACTAGGGAGACTTTCTCCTTTTGTGCGCACAGATGGAGTGACACCTTCCATTCCCAAAGGCCGCACCAGAGCTGCCAAAGATCGGCGGCATTCCATATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0042742 GO:0043207 GO:0050896 GO:0051704 GO:0051707 GO:0098542
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

625

Amino Acids

69.37

Weight (kDa)

6.47

Isoelectric Point (pI)

39.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1754
AarI CACCTGC 1 cut(s) 449
AatII GACGTC 1 cut(s) 1497
Acc16I TGCGCA 1 cut(s) 1799
Acc36I ACCTGC 1 cut(s) 449
AccB7I CCANNNNNTGG 1 cut(s) 105
AccI GTMKAC 1 cut(s) 1603
AccII CGCG 1 cut(s) 930
AciI CCGC 4 cut(s) 5, 614, 1834, 1858
AclWI GGATC 1 cut(s) 1091
AcsI RAATTY 2 cut(s) 302, 319
AcuI CTGAAG 2 cut(s) 606, 684
AcyI GRCGYC 1 cut(s) 1494
AfaI GTAC 4 cut(s) 28, 334, 756, 1556
AfiI CCNNNNNNNGG 5 cut(s) 105, 973, 1047, 1544, 1854
AflIII ACRYGT 1 cut(s) 1053
AgsI TTSAA 8 cut(s) 91, 254, 290, 433, 639, 1448, 1664, 1713
AjuI GAANNNNNNNTTGG 4 cut(s) 503, 535, 1613, 1645
AloI GAACNNNNNNTCC 2 cut(s) 1541, 1573
AluBI AGCT 8 cut(s) 73, 492, 909, 1192, 1396, 1588, 1618, 1844
AluI AGCT 8 cut(s) 73, 492, 909, 1192, 1396, 1588, 1618, 1844
Alw21I GWGCWC 3 cut(s) 840, 1417, 1590
Alw26I GTCTC 5 cut(s) 941, 1246, 1485, 1642, 1774
AlwI GGATC 1 cut(s) 1091
AlwNI CAGNNNCTG 2 cut(s) 470, 1580
Ama87I CYCGRG 1 cut(s) 944
AoxI GGCC 1 cut(s) 1831
ApeKI GCWGC 9 cut(s) 32, 296, 352, 922, 932, 1374, 1421, 1477, 1844
ApoI RAATTY 2 cut(s) 302, 319
ArsI GACNNNNNNTTYG 2 cut(s) 1043, 1075
Asp700I GAANNNNTTC 3 cut(s) 572, 1269, 1708
AspLEI GCGC 3 cut(s) 445, 932, 1800
AspS9I GGNCC 2 cut(s) 749, 1456
AsuC2I CCSGG 1 cut(s) 270
AsuHPI GGTGA 2 cut(s) 1532, 1645
AsuII TTCGAA 1 cut(s) 191
AvaI CYCGRG 1 cut(s) 944
AvaII GGWCC 2 cut(s) 749, 1456
BanII GRGCYC 1 cut(s) 1590
BauI CACGAG 1 cut(s) 839
BbsI GAAGAC 1 cut(s) 866
Bbv12I GWGCWC 3 cut(s) 840, 1417, 1590
BbvI GCAGC 9 cut(s) 19, 308, 339, 909, 919, 1386, 1408, 1489, 1831
BccI CCATC 5 cut(s) 712, 1292, 1375, 1601, 1799
BceAI ACGGC 1 cut(s) 1298
BcgI CGANNNNNNTGC 4 cut(s) 527, 561, 1469, 1503
BcnI CCSGG 1 cut(s) 270
BcoDI GTCTC 5 cut(s) 941, 1246, 1485, 1642, 1774
BfaI CTAG 3 cut(s) 455, 968, 1775
BfmI CTRYAG 1 cut(s) 1372
BfoI RGCGCY 1 cut(s) 446
BfuAI ACCTGC 1 cut(s) 449
BmcAI AGTACT 2 cut(s) 28, 756
Bme1390I CCNGG 1 cut(s) 270
Bme18I GGWCC 2 cut(s) 749, 1456
BmeT110I CYCGRG 1 cut(s) 944
BmgT120I GGNCC 2 cut(s) 749, 1456
BmiI GGNNCC 1 cut(s) 750
BmrFI CCNGG 1 cut(s) 270
BmrI ACTGGG 3 cut(s) 123, 1056, 1568
BmsI GCATC 6 cut(s) 223, 347, 412, 521, 529, 543
BmuI ACTGGG 3 cut(s) 123, 1056, 1568
BpiI GAAGAC 1 cut(s) 866
BplI GAGNNNNNCTC 2 cut(s) 1771, 1803
Bpu10I CCTNAGC 1 cut(s) 1002
Bpu14I TTCGAA 1 cut(s) 191
BpuEI CTTGAG 1 cut(s) 1121
BpuMI CCSGG 1 cut(s) 270
Bsa29I ATCGAT 2 cut(s) 12, 537
BsaAI YACGTR 1 cut(s) 1601
BsaBI GATNNNNATC 2 cut(s) 12, 237
BsaHI GRCGYC 1 cut(s) 1494
BsaJI CCNNGG 1 cut(s) 1452
BsaXI ACNNNNNCTCC 4 cut(s) 585, 615, 1541, 1571
Bsc4I CCNNNNNNNGG 5 cut(s) 105, 973, 1047, 1544, 1854
Bse1I ACTGG 6 cut(s) 99, 129, 571, 752, 1051, 1574
Bse3DI GCAATG 6 cut(s) 167, 342, 354, 720, 903, 1257
Bse8I GATNNNNATC 2 cut(s) 12, 237
BseCI ATCGAT 2 cut(s) 12, 537
BseDI CCNNGG 1 cut(s) 1452
BseGI GGATG 4 cut(s) 1150, 1308, 1336, 1566
BseJI GATNNNNATC 2 cut(s) 12, 237
BseLI CCNNNNNNNGG 5 cut(s) 105, 973, 1047, 1544, 1854
BseMI GCAATG 6 cut(s) 167, 342, 354, 720, 903, 1257
BseMII CTCAG 4 cut(s) 131, 375, 1016, 1439
BseNI ACTGG 6 cut(s) 99, 129, 571, 752, 1051, 1574
BseRI GAGGAG 3 cut(s) 168, 1628, 1722
BseXI GCAGC 9 cut(s) 19, 308, 339, 909, 919, 1386, 1408, 1489, 1831
BsgI GTGCAG 2 cut(s) 18, 483
Bsh1236I CGCG 1 cut(s) 930
Bsh1285I CGRYCG 1 cut(s) 16
BshFI GGCC 1 cut(s) 1833
BshVI ATCGAT 2 cut(s) 12, 537
BsiEI CGRYCG 1 cut(s) 16
BsiHKAI GWGCWC 3 cut(s) 840, 1417, 1590
BsiHKCI CYCGRG 1 cut(s) 944
BsiSI CCGG 1 cut(s) 269
BslFI GGGAC 2 cut(s) 762, 1064
BslI CCNNNNNNNGG 5 cut(s) 105, 973, 1047, 1544, 1854
BsmAI GTCTC 5 cut(s) 941, 1246, 1485, 1642, 1774
BsmBI CGTCTC 1 cut(s) 1485
BsmFI GGGAC 2 cut(s) 762, 1064
BsmI GAATGC 1 cut(s) 1861
BsnI GGCC 1 cut(s) 1833
BsoBI CYCGRG 1 cut(s) 944
Bsp119I TTCGAA 1 cut(s) 191
Bsp1286I GDGCHC 3 cut(s) 840, 1417, 1590
Bsp143I GATC 6 cut(s) 13, 238, 1018, 1083, 1432, 1852
BspACI CCGC 4 cut(s) 5, 614, 1834, 1858
BspANI GGCC 1 cut(s) 1833
BspCNI CTCAG 4 cut(s) 130, 376, 1015, 1438
BspDI ATCGAT 2 cut(s) 12, 537
BspFNI CGCG 1 cut(s) 930
BspHI TCATGA 1 cut(s) 1497
BspLI GGNNCC 1 cut(s) 750
BspMAI CTGCAG 1 cut(s) 1376
BspMI ACCTGC 1 cut(s) 449
BspPI GGATC 1 cut(s) 1091
BspT104I TTCGAA 1 cut(s) 191
BsrDI GCAATG 6 cut(s) 167, 342, 354, 720, 903, 1257
BsrI ACTGG 6 cut(s) 99, 129, 571, 752, 1051, 1574
BssECI CCNNGG 1 cut(s) 1452
BssMI GATC 6 cut(s) 13, 238, 1018, 1083, 1432, 1852
BssNI GRCGYC 1 cut(s) 1494
BssSI CACGAG 1 cut(s) 839
Bst2BI CACGAG 1 cut(s) 839
Bst4CI ACNGT 6 cut(s) 676, 955, 1075, 1229, 1453, 1675
Bst6I CTCTTC 3 cut(s) 86, 839, 974
BstACI GRCGYC 1 cut(s) 1494
BstBAI YACGTR 1 cut(s) 1601
BstBI TTCGAA 1 cut(s) 191
BstC8I GCNNGC 2 cut(s) 961, 992
BstDEI CTNAG 8 cut(s) 60, 117, 384, 680, 856, 1002, 1346, 1425
BstDSI CCRYGG 1 cut(s) 1452
BstENI CCTNNNNNAGG 1 cut(s) 1542
BstF5I GGATG 4 cut(s) 1150, 1308, 1336, 1566
BstFNI CGCG 1 cut(s) 930
BstH2I RGCGCY 1 cut(s) 446
BstHHI GCGC 3 cut(s) 445, 932, 1800
BstKTI GATC 6 cut(s) 16, 241, 1021, 1086, 1435, 1855
BstMAI GTCTC 5 cut(s) 941, 1246, 1485, 1642, 1774
BstMBI GATC 6 cut(s) 13, 238, 1018, 1083, 1432, 1852
BstMCI CGRYCG 1 cut(s) 16
BstMWI GCNNNNNNNGC 4 cut(s) 719, 1217, 1340, 1421
BstNSI RCATGY 1 cut(s) 994
BstSCI CCNGG 1 cut(s) 268
BstSFI CTRYAG 1 cut(s) 1372
BstSNI TACGTA 1 cut(s) 1601
BstUI CGCG 1 cut(s) 930
BstV1I GCAGC 9 cut(s) 19, 308, 339, 909, 919, 1386, 1408, 1489, 1831
BstV2I GAAGAC 1 cut(s) 866
Bsu15I ATCGAT 2 cut(s) 12, 537
BsuRI GGCC 1 cut(s) 1833
BsuTUI ATCGAT 2 cut(s) 12, 537
BtgI CCRYGG 1 cut(s) 1452
BtgZI GCGATG 1 cut(s) 370
BtsCI GGATG 4 cut(s) 1150, 1308, 1336, 1566
BtsI GCAGTG 2 cut(s) 42, 633
BtsIMutI CAGTG 6 cut(s) 42, 106, 136, 633, 1071, 1560
BveI ACCTGC 1 cut(s) 449
Cac8I GCNNGC 2 cut(s) 961, 992
CaiI CAGNNNCTG 2 cut(s) 470, 1580
CciI TCATGA 1 cut(s) 1497
CfoI GCGC 3 cut(s) 445, 932, 1800
Cfr13I GGNCC 2 cut(s) 749, 1456
ClaI ATCGAT 2 cut(s) 12, 537
Csp6I GTAC 4 cut(s) 27, 333, 755, 1555
CviQI GTAC 4 cut(s) 27, 333, 755, 1555
DdeI CTNAG 8 cut(s) 60, 117, 384, 680, 856, 1002, 1346, 1425
DpnI GATC 6 cut(s) 15, 240, 1020, 1085, 1434, 1854
DpnII GATC 6 cut(s) 13, 238, 1018, 1083, 1432, 1852
DraI TTTAAA 1 cut(s) 733
Eam1104I CTCTTC 3 cut(s) 86, 839, 974
EarI CTCTTC 3 cut(s) 86, 839, 974
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 1588
Eco105I TACGTA 1 cut(s) 1601
Eco24I GRGCYC 1 cut(s) 1590
Eco32I GATATC 4 cut(s) 10, 219, 691, 1321
Eco47I GGWCC 2 cut(s) 749, 1456
Eco53kI GAGCTC 1 cut(s) 1588
Eco57I CTGAAG 2 cut(s) 606, 684
Eco88I CYCGRG 1 cut(s) 944
EcoICRI GAGCTC 1 cut(s) 1588
EcoNI CCTNNNNNAGG 1 cut(s) 1542
EcoRV GATATC 4 cut(s) 10, 219, 691, 1321
EcoT22I ATGCAT 1 cut(s) 536
EcoT38I GRGCYC 1 cut(s) 1590
Esp3I CGTCTC 1 cut(s) 1485
FalI AAGNNNNNCTT 2 cut(s) 60, 92
FaqI GGGAC 2 cut(s) 762, 1064
FblI GTMKAC 1 cut(s) 1603
FokI GGATG 4 cut(s) 1157, 1315, 1323, 1553
FriOI GRGCYC 1 cut(s) 1590
FspAI RTGCGCAY 1 cut(s) 1799
FspBI CTAG 3 cut(s) 455, 968, 1775
FspI TGCGCA 1 cut(s) 1799
GlaI GCGC 3 cut(s) 444, 931, 1799
HaeII RGCGCY 1 cut(s) 446
HaeIII GGCC 1 cut(s) 1833
HapII CCGG 1 cut(s) 269
HhaI GCGC 3 cut(s) 445, 932, 1800
Hin1I GRCGYC 1 cut(s) 1494
Hin6I GCGC 3 cut(s) 443, 930, 1798
HinP1I GCGC 3 cut(s) 443, 930, 1798
HindIII AAGCTT 1 cut(s) 1394
HinfI GANTC 3 cut(s) 224, 1027, 1523
HpaII CCGG 1 cut(s) 269
HphI GGTGA 2 cut(s) 1532, 1645
Hpy166II GTNNAC 2 cut(s) 1069, 1604
Hpy188I TCNGA 3 cut(s) 223, 487, 1428
Hpy188III TCNNGA 9 cut(s) 119, 944, 946, 1024, 1274, 1490, 1498, 1580, 1872
Hpy8I GTNNAC 2 cut(s) 1069, 1604
HpyAV CCTTC 5 cut(s) 172, 1448, 1496, 1548, 1827
HpyCH4III ACNGT 6 cut(s) 676, 955, 1075, 1229, 1453, 1675
HpyCH4IV ACGT 3 cut(s) 1055, 1494, 1600
HpyF10VI GCNNNNNNNGC 4 cut(s) 719, 1217, 1340, 1421
HpyF3I CTNAG 8 cut(s) 60, 117, 384, 680, 856, 1002, 1346, 1425
HpySE526I ACGT 3 cut(s) 1055, 1494, 1600
Hsp92I GRCGYC 1 cut(s) 1494
HspAI GCGC 3 cut(s) 443, 930, 1798
Kzo9I GATC 6 cut(s) 13, 238, 1018, 1083, 1432, 1852
LmnI GCTCC 2 cut(s) 275, 1615
Lsp1109I GCAGC 9 cut(s) 19, 308, 339, 909, 919, 1386, 1408, 1489, 1831
LweI GCATC 6 cut(s) 223, 347, 412, 521, 529, 543
MaeI CTAG 3 cut(s) 455, 968, 1775
MaeII ACGT 3 cut(s) 1055, 1494, 1600
MaeIII GTNAC 2 cut(s) 1349, 1810
MalI GATC 6 cut(s) 15, 240, 1020, 1085, 1434, 1854
MboI GATC 6 cut(s) 13, 238, 1018, 1083, 1432, 1852
MfeI CAATTG 2 cut(s) 543, 995
MhlI GDGCHC 3 cut(s) 840, 1417, 1590
MluCI AATT 9 cut(s) 186, 302, 319, 518, 543, 684, 819, 995, 1093
MmeI TCCRAC 3 cut(s) 130, 379, 1165
Mph1103I ATGCAT 1 cut(s) 536
MroXI GAANNNNTTC 3 cut(s) 572, 1269, 1708
MseI TTAA 4 cut(s) 138, 185, 671, 732
MslI CAYNNNNRTG 1 cut(s) 347
MspI CCGG 1 cut(s) 269
MspR9I CCNGG 1 cut(s) 270
MssI GTTTAAAC 1 cut(s) 733
MunI CAATTG 2 cut(s) 543, 995
Mva1269I GAATGC 1 cut(s) 1861
MvnI CGCG 1 cut(s) 930
MwoI GCNNNNNNNGC 4 cut(s) 719, 1217, 1340, 1421
NciI CCSGG 1 cut(s) 270
NdeII GATC 6 cut(s) 13, 238, 1018, 1083, 1432, 1852
NlaIV GGNNCC 1 cut(s) 750
NmuCI GTSAC 2 cut(s) 1349, 1810
NsbI TGCGCA 1 cut(s) 1799
NsiI ATGCAT 1 cut(s) 536
NspI RCATGY 1 cut(s) 994
NspV TTCGAA 1 cut(s) 191
PaeI GCATGC 1 cut(s) 994
PaeR7I CTCGAG 1 cut(s) 944
PagI TCATGA 1 cut(s) 1497
PaqCI CACCTGC 1 cut(s) 449
PctI GAATGC 1 cut(s) 1861
PdmI GAANNNNTTC 3 cut(s) 572, 1269, 1708
PfeI GAWTC 3 cut(s) 224, 1027, 1523
PflMI CCANNNNNTGG 1 cut(s) 105
Ple19I CGATCG 1 cut(s) 16
PmeI GTTTAAAC 1 cut(s) 733
Ppu21I YACGTR 1 cut(s) 1601
PsiI TTATAA 1 cut(s) 1754
Psp124BI GAGCTC 1 cut(s) 1590
PspN4I GGNNCC 1 cut(s) 750
PspPI GGNCC 2 cut(s) 749, 1456
PstI CTGCAG 1 cut(s) 1376
PstNI CAGNNNCTG 2 cut(s) 470, 1580
PvuI CGATCG 1 cut(s) 16
RsaI GTAC 4 cut(s) 28, 334, 756, 1556
RsaNI GTAC 4 cut(s) 27, 333, 755, 1555
RseI CAYNNNNRTG 1 cut(s) 347
SacI GAGCTC 1 cut(s) 1590
SaqAI TTAA 4 cut(s) 138, 185, 671, 732
Sau3AI GATC 6 cut(s) 13, 238, 1018, 1083, 1432, 1852
Sau96I GGNCC 2 cut(s) 749, 1456
ScaI AGTACT 2 cut(s) 28, 756
ScrFI CCNGG 1 cut(s) 270
SduI GDGCHC 3 cut(s) 840, 1417, 1590
SfaNI GCATC 6 cut(s) 223, 347, 412, 521, 529, 543
SfcI CTRYAG 1 cut(s) 1372
Sfr274I CTCGAG 1 cut(s) 944
SfuI TTCGAA 1 cut(s) 191
SinI GGWCC 2 cut(s) 749, 1456
SlaI CTCGAG 1 cut(s) 944
SmiMI CAYNNNNRTG 1 cut(s) 347
SmlI CTYRAG 2 cut(s) 944, 1100
SmoI CTYRAG 2 cut(s) 944, 1100
SnaBI TACGTA 1 cut(s) 1601
SphI GCATGC 1 cut(s) 994
Sse9I AATT 9 cut(s) 186, 302, 319, 518, 543, 684, 819, 995, 1093
SsiI CCGC 4 cut(s) 5, 614, 1834, 1858
SspI AATATT 1 cut(s) 142
SspMI CTAG 3 cut(s) 455, 968, 1775
SstI GAGCTC 1 cut(s) 1590
StyD4I CCNGG 1 cut(s) 268
TaaI ACNGT 6 cut(s) 676, 955, 1075, 1229, 1453, 1675
TaiI ACGT 3 cut(s) 1058, 1497, 1603
TaqI TCGA 8 cut(s) 12, 191, 227, 537, 945, 1283, 1489, 1741
TaqII GACCGA 1 cut(s) 1184
TasI AATT 9 cut(s) 186, 302, 319, 518, 543, 684, 819, 995, 1093
TatI WGTACW 4 cut(s) 26, 332, 754, 1554
TauI GCSGC 2 cut(s) 1836, 1861
TfiI GAWTC 3 cut(s) 224, 1027, 1523
Tru1I TTAA 4 cut(s) 138, 185, 671, 732
Tru9I TTAA 4 cut(s) 138, 185, 671, 732
TscAI CASTG 6 cut(s) 49, 106, 136, 633, 1078, 1567
TseFI GTSAC 2 cut(s) 1349, 1810
TseI GCWGC 9 cut(s) 32, 296, 352, 922, 932, 1374, 1421, 1477, 1844
Tsp45I GTSAC 2 cut(s) 1349, 1810
TspDTI ATGAA 6 cut(s) 134, 450, 621, 1122, 1514, 1655
TspGWI ACGGA 1 cut(s) 1127
TspRI CASTG 6 cut(s) 49, 106, 136, 633, 1078, 1567
Van91I CCANNNNNTGG 1 cut(s) 105
VpaK11BI GGWCC 2 cut(s) 749, 1456
XagI CCTNNNNNAGG 1 cut(s) 1542
XapI RAATTY 2 cut(s) 302, 319
XceI RCATGY 1 cut(s) 994
XhoI CTCGAG 1 cut(s) 944
XmiI GTMKAC 1 cut(s) 1603
XmnI GAANNNNTTC 3 cut(s) 572, 1269, 1708
XspI CTAG 3 cut(s) 455, 968, 1775
ZraI GACGTC 1 cut(s) 1495
ZrmI AGTACT 2 cut(s) 28, 756
Zsp2I ATGCAT 1 cut(s) 536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.