Prupe.6G232200_v2.0.a1

Belongs to the acylphosphatase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
23483759 .. 23485266
1508 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G232200.1

Sequence Viewer

Length: 633 bp
ATGGCATCAGCAGCAATCTCAGTGAGGCCACTGATATCAGCTCGACACAAAGCAAACGCAGCAACCAGATTCCTCACATCTCGGAGCAATACCCATCCACCAACATCACTAGATAAATGGACCCTAAACGACACCGCAAGCAATGCTGCTAGTTCTGCTCTTAGACTCGTCCCCCATCTCCATAATCCTCGCCATCATCTTCTTCATCCTCCTCTTTCGATTTGCCGTCTTCTTCTTCTTCCTCGCCCTCCTCTTTCTCCTCTGCTCAGACCTCGTCCACCTCTTCTTCGACATTATCTGCCCCTGATGACCACTCCCCATGCCACCTCTGATTCGGCCCATTCCTCCTCAGCCTCCTGCAAAACGGTGAGGCTTGTGGTAAAGGGGAGGGTGCAGGGTGTGTTTTACAGGAACTGGACAATTGAGAACGCAACCCAATTGGGCTTGAAAGGTTGGGTTCGGAACAGAAGAGATGGGTCTGTGGAGACTCTGCTTTCTGGGAACCCTGATGCGGTTCAAGAGATGGAGCAGAGGTGTCGACGAGGTCCTCCATCTGCTGTGGTCACTGGGCTCGAGGTCTTTCCCAGCACTGAGGACCCTGGGGATGGATTTGAGCGCAAACAAACGGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

211

Amino Acids

23.15

Weight (kDa)

10.97

Isoelectric Point (pI)

49.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015379)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03370
fragaria_vesca FvH4_6g16390
malus_domestica MD04G1093600.v1.1
prunus_persica Prupe.6G232200_v2.0.a1
pyrus_communis pycom04g08880
rosa_chinensis RchiOBHm_Chr3g0470251
rosa_laevigata RLG00000024286
rosa_multiflora Rmu_co8326943.1_g000001 Rmu_sc0011073.1_g000005
rosa_roxburghii Rroxscaffold_6G00411030
rosa_rugosa Rorug03G0107700
rosa_samantha Rh3AG157300 Rh3BG181400 Rh3CG172300 Rh3DG193400
rosa_wichuraiana Rw3G014970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 538
AciI CCGC 2 cut(s) 135, 512
AfiI CCNNNNNNNGG 2 cut(s) 511, 605
AgsI TTSAA 2 cut(s) 448, 518
AjnI CCWGG 1 cut(s) 598
AluBI AGCT 1 cut(s) 41
AluI AGCT 1 cut(s) 41
Alw26I GTCTC 1 cut(s) 479
AlwNI CAGNNNCTG 1 cut(s) 414
Ama87I CYCGRG 1 cut(s) 572
AoxI GGCC 2 cut(s) 26, 336
ApeKI GCWGC 3 cut(s) 11, 59, 146
ArsI GACNNNNNNTTYG 1 cut(s) 612
AspLEI GCGC 1 cut(s) 618
AspS9I GGNCC 4 cut(s) 120, 337, 545, 595
AsuHPI GGTGA 1 cut(s) 379
AvaI CYCGRG 1 cut(s) 572
AvaII GGWCC 3 cut(s) 120, 545, 595
BanII GRGCYC 1 cut(s) 573
BbsI GAAGAC 1 cut(s) 221
BbvCI CCTCAGC 1 cut(s) 349
BbvI GCAGC 3 cut(s) 23, 71, 133
BccI CCATC 7 cut(s) 102, 183, 201, 467, 517, 559, 599
BceAI ACGGC 1 cut(s) 210
BcgI CGANNNNNNTGC 2 cut(s) 518, 552
BciT130I CCWGG 1 cut(s) 600
BcoDI GTCTC 1 cut(s) 479
BfaI CTAG 2 cut(s) 110, 150
BisI GCNGC 3 cut(s) 12, 60, 147
BlsI GCNGC 3 cut(s) 13, 61, 148
Bme1390I CCNGG 1 cut(s) 600
Bme18I GGWCC 3 cut(s) 120, 545, 595
BmeT110I CYCGRG 1 cut(s) 572
BmgT120I GGNCC 4 cut(s) 120, 337, 545, 595
BmiI GGNNCC 3 cut(s) 122, 503, 597
BmrFI CCNGG 1 cut(s) 600
BmrI ACTGGG 1 cut(s) 576
BmsI GCATC 2 cut(s) 14, 499
BmuI ACTGGG 1 cut(s) 576
BpiI GAAGAC 1 cut(s) 221
Bpu10I CCTNAGC 1 cut(s) 349
BsaJI CCNNGG 2 cut(s) 598, 599
BsaXI ACNNNNNCTCC 2 cut(s) 518, 548
Bsc4I CCNNNNNNNGG 2 cut(s) 511, 605
Bse1I ACTGG 2 cut(s) 419, 571
Bse3DI GCAATG 1 cut(s) 148
BseBI CCWGG 1 cut(s) 600
BseDI CCNNGG 2 cut(s) 598, 599
BseGI GGATG 3 cut(s) 94, 205, 610
BseLI CCNNNNNNNGG 2 cut(s) 511, 605
BseMI GCAATG 1 cut(s) 148
BseMII CTCAG 4 cut(s) 33, 280, 363, 582
BseNI ACTGG 2 cut(s) 419, 571
BseRI GAGGAG 4 cut(s) 201, 240, 249, 337
BseXI GCAGC 3 cut(s) 23, 71, 133
BseYI CCCAGC 1 cut(s) 584
BsgI GTGCAG 1 cut(s) 413
BshFI GGCC 2 cut(s) 28, 338
BsiHKCI CYCGRG 1 cut(s) 572
BslFI GGGAC 1 cut(s) 155
BslI CCNNNNNNNGG 2 cut(s) 511, 605
BsmAI GTCTC 1 cut(s) 479
BsmFI GGGAC 1 cut(s) 155
BsnI GGCC 2 cut(s) 28, 338
BsoBI CYCGRG 1 cut(s) 572
Bsp1286I GDGCHC 1 cut(s) 573
BspACI CCGC 2 cut(s) 135, 512
BspANI GGCC 2 cut(s) 28, 338
BspCNI CTCAG 4 cut(s) 32, 279, 362, 583
BspLI GGNNCC 3 cut(s) 122, 503, 597
BsrDI GCAATG 1 cut(s) 148
BsrI ACTGG 2 cut(s) 419, 571
BssECI CCNNGG 2 cut(s) 598, 599
Bst2UI CCWGG 1 cut(s) 600
Bst4CI ACNGT 2 cut(s) 367, 628
Bst6I CTCTTC 2 cut(s) 288, 463
BstAPI GCANNNNNTGC 1 cut(s) 143
BstC8I GCNNGC 1 cut(s) 139
BstDEI CTNAG 5 cut(s) 19, 161, 266, 349, 591
BstF5I GGATG 3 cut(s) 94, 205, 610
BstHHI GCGC 1 cut(s) 618
BstMAI GTCTC 1 cut(s) 479
BstMWI GCNNNNNNNGC 4 cut(s) 11, 59, 143, 155
BstNI CCWGG 1 cut(s) 600
BstSCI CCNGG 1 cut(s) 598
BstV1I GCAGC 3 cut(s) 23, 71, 133
BstV2I GAAGAC 1 cut(s) 221
BsuRI GGCC 2 cut(s) 28, 338
BtsCI GGATG 3 cut(s) 94, 205, 610
BtsIMutI CAGTG 4 cut(s) 27, 29, 564, 588
Cac8I GCNNGC 1 cut(s) 139
CaiI CAGNNNCTG 1 cut(s) 414
CfoI GCGC 1 cut(s) 618
Cfr13I GGNCC 4 cut(s) 120, 337, 545, 595
CviAII CATG 1 cut(s) 320
CviJI RGCY 7 cut(s) 28, 41, 338, 353, 373, 444, 571
CviKI_1 RGCY 7 cut(s) 28, 41, 338, 353, 373, 444, 571
DdeI CTNAG 5 cut(s) 19, 161, 266, 349, 591
Eam1104I CTCTTC 2 cut(s) 288, 463
EarI CTCTTC 2 cut(s) 288, 463
Eco24I GRGCYC 1 cut(s) 573
Eco32I GATATC 1 cut(s) 36
Eco47I GGWCC 3 cut(s) 120, 545, 595
Eco88I CYCGRG 1 cut(s) 572
EcoO109I RGGNCCY 2 cut(s) 545, 595
EcoRII CCWGG 1 cut(s) 598
EcoRV GATATC 1 cut(s) 36
EcoT38I GRGCYC 1 cut(s) 573
FaeI CATG 1 cut(s) 323
FaiI YATR 2 cut(s) 183, 321
FaqI GGGAC 1 cut(s) 155
FatI CATG 1 cut(s) 319
FblI GTMKAC 1 cut(s) 538
Fnu4HI GCNGC 3 cut(s) 12, 60, 147
FokI GGATG 3 cut(s) 81, 192, 617
FriOI GRGCYC 1 cut(s) 573
Fsp4HI GCNGC 3 cut(s) 12, 60, 147
FspBI CTAG 2 cut(s) 110, 150
GlaI GCGC 1 cut(s) 617
GluI GCNGC 3 cut(s) 12, 60, 147
GsaI CCCAGC 1 cut(s) 588
HaeIII GGCC 2 cut(s) 28, 338
HhaI GCGC 1 cut(s) 618
Hin1II CATG 1 cut(s) 323
Hin6I GCGC 1 cut(s) 616
HinP1I GCGC 1 cut(s) 616
HincII GTYRAC 1 cut(s) 539
HindII GTYRAC 1 cut(s) 539
HinfI GANTC 4 cut(s) 69, 165, 332, 487
HphI GGTGA 1 cut(s) 379
Hpy166II GTNNAC 2 cut(s) 278, 539
Hpy188I TCNGA 5 cut(s) 84, 269, 331, 462, 632
Hpy188III TCNNGA 1 cut(s) 518
Hpy8I GTNNAC 2 cut(s) 278, 539
Hpy99I CGWCG 1 cut(s) 543
HpyCH4III ACNGT 2 cut(s) 367, 628
HpyCH4V TGCA 2 cut(s) 360, 394
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 59, 143, 155
HpyF3I CTNAG 5 cut(s) 19, 161, 266, 349, 591
Hsp92II CATG 1 cut(s) 323
HspAI GCGC 1 cut(s) 616
LmnI GCTCC 2 cut(s) 84, 526
Lsp1109I GCAGC 3 cut(s) 23, 71, 133
LweI GCATC 2 cut(s) 14, 499
MaeI CTAG 2 cut(s) 110, 150
MaeIII GTNAC 1 cut(s) 562
MboII GAAGA 9 cut(s) 191, 194, 221, 224, 227, 230, 275, 278, 480
MfeI CAATTG 2 cut(s) 420, 437
MhlI GDGCHC 1 cut(s) 573
MluCI AATT 2 cut(s) 420, 437
MlyI GAGTC 2 cut(s) 159, 481
MspR9I CCNGG 1 cut(s) 600
MunI CAATTG 2 cut(s) 420, 437
MvaI CCWGG 1 cut(s) 600
MwoI GCNNNNNNNGC 4 cut(s) 11, 59, 143, 155
NlaIII CATG 1 cut(s) 323
NlaIV GGNNCC 3 cut(s) 122, 503, 597
NmuCI GTSAC 1 cut(s) 562
PaeR7I CTCGAG 1 cut(s) 572
PasI CCCWGGG 1 cut(s) 599
PfeI GAWTC 2 cut(s) 69, 332
PflFI GACNNNGTC 2 cut(s) 273, 543
PkrI GCNGC 3 cut(s) 13, 61, 148
PleI GAGTC 2 cut(s) 159, 481
PpsI GAGTC 2 cut(s) 159, 481
PpuMI RGGWCCY 2 cut(s) 545, 595
Psp5II RGGWCCY 2 cut(s) 545, 595
Psp6I CCWGG 1 cut(s) 598
PspFI CCCAGC 1 cut(s) 584
PspGI CCWGG 1 cut(s) 598
PspN4I GGNNCC 3 cut(s) 122, 503, 597
PspPI GGNCC 4 cut(s) 120, 337, 545, 595
PspPPI RGGWCCY 2 cut(s) 545, 595
PspXI VCTCGAGB 1 cut(s) 572
PstNI CAGNNNCTG 1 cut(s) 414
PsyI GACNNNGTC 2 cut(s) 273, 543
SalI GTCGAC 1 cut(s) 537
SatI GCNGC 3 cut(s) 12, 60, 147
Sau96I GGNCC 4 cut(s) 120, 337, 545, 595
SchI GAGTC 2 cut(s) 159, 481
ScrFI CCNGG 1 cut(s) 600
SduI GDGCHC 1 cut(s) 573
SetI ASST 8 cut(s) 43, 274, 283, 329, 454, 536, 547, 579
SfaNI GCATC 2 cut(s) 14, 499
Sfr274I CTCGAG 1 cut(s) 572
SinI GGWCC 3 cut(s) 120, 545, 595
SlaI CTCGAG 1 cut(s) 572
SmlI CTYRAG 1 cut(s) 572
SmoI CTYRAG 1 cut(s) 572
Sse9I AATT 2 cut(s) 420, 437
SsiI CCGC 2 cut(s) 135, 512
SspMI CTAG 2 cut(s) 110, 150
StyD4I CCNGG 1 cut(s) 598
TaaI ACNGT 2 cut(s) 367, 628
TaqI TCGA 5 cut(s) 43, 218, 289, 538, 573
TasI AATT 2 cut(s) 420, 437
TfiI GAWTC 2 cut(s) 69, 332
TscAI CASTG 4 cut(s) 27, 36, 571, 595
TseFI GTSAC 1 cut(s) 562
TseI GCWGC 3 cut(s) 11, 59, 146
Tsp45I GTSAC 1 cut(s) 562
TspDTI ATGAA 1 cut(s) 194
TspRI CASTG 4 cut(s) 27, 36, 571, 595
Tth111I GACNNNGTC 2 cut(s) 273, 543
VpaK11BI GGWCC 3 cut(s) 120, 545, 595
XhoI CTCGAG 1 cut(s) 572
XmiI GTMKAC 1 cut(s) 538
XspI CTAG 2 cut(s) 110, 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.