Prupe.6G260900_v2.0.a1
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0012635
Physical Location & Seq
Reverse (-)
25132019 .. 25137165
5147 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G260900.1

Sequence Viewer

Length: 2109 bp
ATGGGAACTACTGCTCTGAGGCAGTTGCTCAAGAGCCTCTGCAGCAACCATTCGCCTTGGAAATATGCGGTGATTTGGAAGCTCAAGCACCAGAGCGATTTGATATTGGCCTGGGAGGATGGGTACTGCCATCATCCAAAACCAAGAGAAGCTGTGGAACATTCACCGGATGACATCTACTTCAGCGACGCAAGTGTACATGATGGTGGATCTACAGGCTATCCAATTGGACTAGCGGTGGCTGATATGTCACATCTTCAGCACACATTTGGAAAAGGGGTTGTCGGTGAGGTGGCTTGCACAGGGAACCATAAATGGGTTTCCCTTCACAGTTTGTGCACCAGAGAGTCTGACTCTAAGTTAGTTCCTGAGTGTCCAGATGAATGGCTTCTTCAGTTTGCGTTGGGTATCAAGACAATTTTGCTTGTACCTGTACTTCCATATGGAGTTTTGCAACTTGGCTCCATGGAAACGGTTGCTGAAGATCAGGCAGTGGTTGCTTTTGTGAAAGATAGATTCAATGCCATTCACAATGTTGTGGGGAAAACTGTACCTTCTACCTTATTTAGGGACATTCGAGCTGAATCATTATGGCCACAATCATCTAGTTTAATGGAGAACACATTTGAATCATCAGCTGTTACCATTAACCCACTCAAGGTTGAAAGGTCAGAAGAGGTTGGTAACATCAGACTGAATGATATCTTACTATCAACTTTGGAGCAATTTGTGCAATTGCCAACCATTGAAAATGTACTTCTAGACTCTGGAACAGATCAGTCAGAAGTTCTTAAGAGAATTGGAGAAAATGAGATTGGTGTTCCACGTATTTATCACATTGGAGAATCGAATCCACTCAGTCAGTGTGTAGATACCGAAATGCTGGAGACCATAGAGACTCAAATGTTTGGGTTGTCTTGTTTGGAGGAAGAACTTGTAGCCCATTCTCAGTACGGTGGTTATAACGTGGATGTGCTTGGAGACCCTTTAAGTGGTTTCAATTCTTACTCTGCCGGAGGTATAGCAGAACAACTGTTGAATTACAATAATGCTGAAGATATAAGTTACAACAGGAAGGATAGTTTCTTTAGCTTTCCTGAAAATTGTGAACTACACAAAGCACTTGGAACAACTTTCCAGAGGCAGACCGATGAACATTTATGGAATTCATCCATCTCCATTGATGACACATGTAGCAGCTCTGGTTTGCAGAAAGATTTCATTCGCAGTATTGAGCCATCAAGGCTTTCGAAAGGAAGCGATGCTGAGAACCTCTTTGAATCCATGGTAGCCAGAGATGACACCTCATCGAGCAGATCTGACAATATTAAATCATGTATGACCACATCAAGTCAATTTCCTGCTTCTTGTGAACAATTGAAATTTGAAGCAAGTGCCCCAACGGAGAGTGATTCAATGACATGGAATCATGCATCCGCTTCTTTCAAAGGCACCATGAGCACTTTGCTTGACAAAGAGCAGCTGGGCAAAGGATACACTTCTACAAAGCCTAAAAAGGAACAAAAGTCGTCCGGTGCCAGTGCAAGAAGGACCAGGCTTAGCAACAGCCCAAAGCTAAGACCAAGAGATAGACAATTGATTCAGGATCGTGTCAAAGAGCTGCGGGAACTCGTCCCAAATGGTGCCAAGTGCAGCATTGATGGCCTTTTAGACCGAACCATAAAACACATGATGTATTTAAGAACCATGACTGACCAAGCTGAAAAACTGGGGTGCTATGCGCATCAAGAGGTACCTCGTTCTAATAACATGAGCGAGGCCAAAATTGGTGGCCAAAATGGGACAAGCAGGGGTTTTGAAATCGGAAGCGAACTTCAGATTTGCCCTATTGTGGTAGAAGATCTTCAACACCCAGGGCACATGCTCATAGAGATGCTATGTGATGAACATGGACTTTTCCTAGACATTGCCCAAGCAATCCGTCGATTGGAGTTGACCATCTTGAAGGGTGTGATGGAAACCCGCTCAAGCAATATGTGGGCACATTTTATTGTTGAGGCTCCCAGGGGGTTTCACAGAATGGATGTTTTTTGGCCGCTGCTACACCTTCTGCAACGCAGAAGAAATAACATATCAAGCAAGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bHLH-MYC_N

Protein Analysis

703

Amino Acids

78.42

Weight (kDa)

5.58

Isoelectric Point (pI)

51.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012635)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g13090 FvH4_6g13090 FvH4_6g13090 FvH4_6g13090 FvH4_6g13090
malus_domestica MD04G1135600.v1.1 MD12G1149300.v1.1
prunus_persica Prupe.6G260900_v2.0.a1
pyrus_communis pycom04g12270 pycom12g14310
rosa_chinensis RchiOBHm_Chr3g0465361
rosa_laevigata RLG00000024643
rosa_multiflora Rmu_sc0011781.1_g000003
rosa_roxburghii Rroxscaffold_6G00415100
rosa_rugosa Rorug03G0076300
rosa_samantha Rh3BG141300 Rh3CG142400 Rh3DG142400
rosa_wichuraiana Rw3G011560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 963
Acc16I TGCGCA 1 cut(s) 1743
Acc65I GGTACC 1 cut(s) 1753
AccB1I GGYRCC 4 cut(s) 1451, 1535, 1643, 1753
AccBSI CCGCTC 1 cut(s) 1986
AciI CCGC 6 cut(s) 68, 236, 1437, 1624, 1984, 2057
AclWI GGATC 2 cut(s) 217, 1614
AcoI YGGCCR 3 cut(s) 593, 1792, 2054
AcsI RAATTY 2 cut(s) 1165, 1382
AcuI CTGAAG 6 cut(s) 166, 242, 377, 501, 1074, 1820
AfaI GTAC 8 cut(s) 125, 198, 429, 435, 552, 756, 953, 1755
AfiI CCNNNNNNNGG 6 cut(s) 316, 567, 658, 992, 1852, 1948
AflII CTTAAG 1 cut(s) 791
AflIII ACRYGT 1 cut(s) 1190
AjnI CCWGG 4 cut(s) 110, 1553, 1873, 2024
AjuI GAANNNNNNNTTGG 2 cut(s) 798, 830
Alw21I GWGCWC 2 cut(s) 341, 1463
Alw26I GTCTC 3 cut(s) 881, 890, 975
Alw44I GTGCAC 1 cut(s) 337
AlwI GGATC 2 cut(s) 217, 1614
AoxI GGCC 6 cut(s) 108, 593, 1663, 1779, 1792, 2054
ApaLI GTGCAC 1 cut(s) 337
ApeKI GCWGC 6 cut(s) 42, 1197, 1480, 1621, 1653, 2059
ApoI RAATTY 2 cut(s) 1165, 1382
Asp700I GAANNNNTTC 3 cut(s) 387, 1217, 1863
Asp718I GGTACC 1 cut(s) 1753
AspLEI GCGC 1 cut(s) 1744
AspS9I GGNCC 1 cut(s) 1551
AsuHPI GGTGA 3 cut(s) 82, 156, 299
AsuII TTCGAA 1 cut(s) 1250
AvaII GGWCC 1 cut(s) 1551
BaeGI GKGCMC 4 cut(s) 341, 1399, 1881, 2005
BalI TGGCCA 2 cut(s) 595, 1794
BanI GGYRCC 4 cut(s) 1451, 1535, 1643, 1753
BarI GAAGNNNNNNTAC 4 cut(s) 420, 452, 1848, 1880
Bbv12I GWGCWC 2 cut(s) 341, 1463
BbvI GCAGC 6 cut(s) 54, 1209, 1492, 1608, 1665, 2046
BccI CCATC 8 cut(s) 113, 138, 197, 1181, 1246, 1655, 1967, 1969
BciT130I CCWGG 4 cut(s) 112, 1555, 1875, 2026
BciVI GTATCC 1 cut(s) 1487
BcoDI GTCTC 3 cut(s) 881, 890, 975
BfaI CTAG 4 cut(s) 233, 606, 761, 1922
BfmI CTRYAG 2 cut(s) 40, 213
BfrI CTTAAG 1 cut(s) 791
BfuI GTATCC 1 cut(s) 1487
BglI GCCNNNNNGGC 1 cut(s) 1243
BglII AGATCT 3 cut(s) 1316, 1861, 2103
BisI GCNGC 7 cut(s) 43, 1198, 1481, 1622, 1654, 2057, 2060
BlpI GCTNAGC 1 cut(s) 1559
BlsI GCNGC 7 cut(s) 44, 1199, 1482, 1623, 1655, 2058, 2061
Bme1390I CCNGG 4 cut(s) 112, 1555, 1875, 2026
Bme18I GGWCC 1 cut(s) 1551
BmgT120I GGNCC 1 cut(s) 1551
BmiI GGNNCC 7 cut(s) 308, 463, 1453, 1537, 1645, 1755, 2022
BmrFI CCNGG 4 cut(s) 112, 1555, 1875, 2026
BmrI ACTGGG 1 cut(s) 1739
BmsI GCATC 4 cut(s) 1252, 1442, 1753, 1884
BmuI ACTGGG 1 cut(s) 1739
BplI GAGNNNNNCTC 2 cut(s) 338, 370
BpmI CTGGAG 1 cut(s) 905
Bpu1102I GCTNAGC 1 cut(s) 1559
Bpu14I TTCGAA 1 cut(s) 1250
BpuEI CTTGAG 4 cut(s) 14, 68, 641, 1972
BsaAI YACGTR 1 cut(s) 827
BsaI GGTCTC 2 cut(s) 881, 975
BsaJI CCNNGG 8 cut(s) 56, 111, 465, 1284, 1873, 1874, 2024, 2025
BsaWI WCCGGW 2 cut(s) 166, 1532
BsaXI ACNNNNNCTCC 2 cut(s) 107, 137
Bsc4I CCNNNNNNNGG 6 cut(s) 316, 567, 658, 992, 1852, 1948
Bse1I ACTGG 2 cut(s) 1539, 1734
Bse3DI GCAATG 1 cut(s) 1926
BseBI CCWGG 4 cut(s) 112, 1555, 1875, 2026
BseDI CCNNGG 8 cut(s) 56, 111, 465, 1284, 1873, 1874, 2024, 2025
BseGI GGATG 7 cut(s) 124, 133, 175, 976, 1169, 1433, 2050
BseLI CCNNNNNNNGG 6 cut(s) 316, 567, 658, 992, 1852, 1948
BseMI GCAATG 1 cut(s) 1926
BseMII CTCAG 5 cut(s) 8, 360, 871, 962, 1257
BseNI ACTGG 2 cut(s) 1539, 1734
BseSI GKGCMC 4 cut(s) 341, 1399, 1881, 2005
BseXI GCAGC 6 cut(s) 54, 1209, 1492, 1608, 1665, 2046
BseYI CCCAGC 1 cut(s) 1483
BsgI GTGCAG 1 cut(s) 1672
BshFI GGCC 6 cut(s) 110, 595, 1665, 1781, 1794, 2056
BshNI GGYRCC 4 cut(s) 1451, 1535, 1643, 1753
BsiHKAI GWGCWC 2 cut(s) 341, 1463
BsiSI CCGG 3 cut(s) 167, 1014, 1533
BslFI GGGAC 3 cut(s) 584, 1619, 1816
BslI CCNNNNNNNGG 6 cut(s) 316, 567, 658, 992, 1852, 1948
BsmAI GTCTC 3 cut(s) 881, 890, 975
BsmFI GGGAC 3 cut(s) 584, 1619, 1816
BsnI GGCC 6 cut(s) 110, 595, 1665, 1781, 1794, 2056
Bso31I GGTCTC 2 cut(s) 881, 975
Bsp119I TTCGAA 1 cut(s) 1250
Bsp1286I GDGCHC 5 cut(s) 341, 1399, 1463, 1881, 2005
Bsp1407I TGTACA 1 cut(s) 196
Bsp143I GATC 7 cut(s) 209, 484, 775, 1316, 1606, 1861, 2103
Bsp1720I GCTNAGC 1 cut(s) 1559
Bsp19I CCATGG 2 cut(s) 465, 1284
BspACI CCGC 6 cut(s) 68, 236, 1437, 1624, 1984, 2057
BspANI GGCC 6 cut(s) 110, 595, 1665, 1781, 1794, 2056
BspCNI CTCAG 5 cut(s) 9, 361, 870, 961, 1258
BspLI GGNNCC 7 cut(s) 308, 463, 1453, 1537, 1645, 1755, 2022
BspMAI CTGCAG 1 cut(s) 44
BspPI GGATC 2 cut(s) 217, 1614
BspT104I TTCGAA 1 cut(s) 1250
BspT107I GGYRCC 4 cut(s) 1451, 1535, 1643, 1753
BspTI CTTAAG 1 cut(s) 791
BspTNI GGTCTC 2 cut(s) 881, 975
BsrBI CCGCTC 1 cut(s) 1986
BsrDI GCAATG 1 cut(s) 1926
BsrGI TGTACA 1 cut(s) 196
BsrI ACTGG 2 cut(s) 1539, 1734
BssECI CCNNGG 8 cut(s) 56, 111, 465, 1284, 1873, 1874, 2024, 2025
BssMI GATC 7 cut(s) 209, 484, 775, 1316, 1606, 1861, 2103
BssT1I CCWWGG 3 cut(s) 56, 465, 1284
Bst2UI CCWGG 4 cut(s) 112, 1555, 1875, 2026
Bst4CI ACNGT 5 cut(s) 332, 475, 550, 956, 1035
Bst6I CTCTTC 1 cut(s) 669
BstAFI CTTAAG 1 cut(s) 791
BstAPI GCANNNNNTGC 2 cut(s) 497, 730
BstAUI TGTACA 1 cut(s) 196
BstBAI YACGTR 1 cut(s) 827
BstBI TTCGAA 1 cut(s) 1250
BstC8I GCNNGC 1 cut(s) 298
BstDEI CTNAG 8 cut(s) 17, 357, 369, 857, 948, 1266, 1559, 1577
BstDSI CCRYGG 2 cut(s) 465, 1284
BstENI CCTNNNNNAGG 1 cut(s) 565
BstF5I GGATG 7 cut(s) 124, 133, 175, 976, 1169, 1433, 2050
BstHHI GCGC 1 cut(s) 1744
BstKTI GATC 7 cut(s) 212, 487, 778, 1319, 1609, 1864, 2106
BstMAI GTCTC 3 cut(s) 881, 890, 975
BstMBI GATC 7 cut(s) 209, 484, 775, 1316, 1606, 1861, 2103
BstMWI GCNNNNNNNGC 6 cut(s) 42, 497, 730, 1243, 1458, 1662
BstNI CCWGG 4 cut(s) 112, 1555, 1875, 2026
BstNSI RCATGY 2 cut(s) 1194, 1885
BstSCI CCNGG 4 cut(s) 110, 1553, 1873, 2024
BstSFI CTRYAG 2 cut(s) 40, 213
BstSLI GKGCMC 4 cut(s) 341, 1399, 1881, 2005
BstV1I GCAGC 6 cut(s) 54, 1209, 1492, 1608, 1665, 2046
BstX2I RGATCY 4 cut(s) 209, 1316, 1861, 2103
BstXI CCANNNNNNTGG 1 cut(s) 384
BstYI RGATCY 4 cut(s) 209, 1316, 1861, 2103
BsuI GTATCC 1 cut(s) 1487
BsuRI GGCC 6 cut(s) 110, 595, 1665, 1781, 1794, 2056
BtgI CCRYGG 2 cut(s) 465, 1284
BtgZI GCGATG 1 cut(s) 1275
BtsCI GGATG 7 cut(s) 124, 133, 175, 976, 1169, 1433, 2050
BtsI GCAGTG 1 cut(s) 498
BtsIMutI CAGTG 3 cut(s) 498, 869, 1546
Cac8I GCNNGC 1 cut(s) 298
CfoI GCGC 1 cut(s) 1744
Cfr13I GGNCC 1 cut(s) 1551
CseI GACGC 1 cut(s) 197
Csp6I GTAC 8 cut(s) 124, 197, 428, 434, 551, 755, 952, 1754
CspCI CAANNNNNGTGG 2 cut(s) 1771, 1806
CviQI GTAC 8 cut(s) 124, 197, 428, 434, 551, 755, 952, 1754
DdeI CTNAG 8 cut(s) 17, 357, 369, 857, 948, 1266, 1559, 1577
DpnI GATC 7 cut(s) 211, 486, 777, 1318, 1608, 1863, 2105
DpnII GATC 7 cut(s) 209, 484, 775, 1316, 1606, 1861, 2103
EaeI YGGCCR 3 cut(s) 593, 1792, 2054
Eam1104I CTCTTC 1 cut(s) 669
EarI CTCTTC 1 cut(s) 669
Eco130I CCWWGG 3 cut(s) 56, 465, 1284
Eco31I GGTCTC 2 cut(s) 881, 975
Eco32I GATATC 1 cut(s) 703
Eco47I GGWCC 1 cut(s) 1551
Eco57I CTGAAG 6 cut(s) 166, 242, 377, 501, 1074, 1820
EcoNI CCTNNNNNAGG 1 cut(s) 565
EcoRI GAATTC 1 cut(s) 1165
EcoRII CCWGG 4 cut(s) 110, 1553, 1873, 2024
EcoRV GATATC 1 cut(s) 703
EcoT14I CCWWGG 3 cut(s) 56, 465, 1284
EcoT22I ATGCAT 1 cut(s) 1435
ErhI CCWWGG 3 cut(s) 56, 465, 1284
FaqI GGGAC 3 cut(s) 584, 1619, 1816
FauI CCCGC 2 cut(s) 1617, 1991
FauNDI CATATG 1 cut(s) 442
Fnu4HI GCNGC 7 cut(s) 43, 1198, 1481, 1622, 1654, 2057, 2060
FokI GGATG 7 cut(s) 120, 131, 182, 983, 1156, 1420, 2057
Fsp4HI GCNGC 7 cut(s) 43, 1198, 1481, 1622, 1654, 2057, 2060
FspAI RTGCGCAY 1 cut(s) 1743
FspBI CTAG 4 cut(s) 233, 606, 761, 1922
FspI TGCGCA 1 cut(s) 1743
GlaI GCGC 1 cut(s) 1743
GluI GCNGC 7 cut(s) 43, 1198, 1481, 1622, 1654, 2057, 2060
GsaI CCCAGC 1 cut(s) 1487
GsuI CTGGAG 1 cut(s) 905
HaeIII GGCC 6 cut(s) 110, 595, 1665, 1781, 1794, 2056
HapII CCGG 3 cut(s) 167, 1014, 1533
HgaI GACGC 1 cut(s) 197
HhaI GCGC 1 cut(s) 1744
Hin6I GCGC 1 cut(s) 1742
HinP1I GCGC 1 cut(s) 1742
HincII GTYRAC 1 cut(s) 1956
HindII GTYRAC 1 cut(s) 1956
HpaII CCGG 3 cut(s) 167, 1014, 1533
HphI GGTGA 3 cut(s) 82, 156, 299
Hpy166II GTNNAC 5 cut(s) 197, 339, 1109, 1373, 1956
Hpy188I TCNGA 9 cut(s) 18, 352, 673, 692, 784, 1321, 1826, 1839, 2108
Hpy8I GTNNAC 5 cut(s) 197, 339, 1109, 1373, 1956
Hpy99I CGWCG 2 cut(s) 191, 1947
HpyAV CCTTC 6 cut(s) 335, 564, 1069, 1542, 1960, 2078
HpyCH4III ACNGT 5 cut(s) 332, 475, 550, 956, 1035
HpyCH4IV ACGT 2 cut(s) 826, 966
HpyF10VI GCNNNNNNNGC 6 cut(s) 42, 497, 730, 1243, 1458, 1662
HpyF3I CTNAG 8 cut(s) 17, 357, 369, 857, 948, 1266, 1559, 1577
HpySE526I ACGT 2 cut(s) 826, 966
HspAI GCGC 1 cut(s) 1742
KpnI GGTACC 1 cut(s) 1757
Kzo9I GATC 7 cut(s) 209, 484, 775, 1316, 1606, 1861, 2103
LmnI GCTCC 3 cut(s) 467, 721, 2026
Lsp1109I GCAGC 6 cut(s) 54, 1209, 1492, 1608, 1665, 2046
LweI GCATC 4 cut(s) 1252, 1442, 1753, 1884
MaeI CTAG 4 cut(s) 233, 606, 761, 1922
MaeII ACGT 2 cut(s) 826, 966
MaeIII GTNAC 4 cut(s) 249, 640, 683, 1064
MalI GATC 7 cut(s) 211, 486, 777, 1318, 1608, 1863, 2105
MbiI CCGCTC 1 cut(s) 1986
MboI GATC 7 cut(s) 209, 484, 775, 1316, 1606, 1861, 2103
MboII GAAGA 9 cut(s) 248, 383, 494, 686, 941, 1067, 1856, 1871, 2094
MfeI CAATTG 4 cut(s) 225, 734, 1376, 1595
MflI RGATCY 4 cut(s) 209, 1316, 1861, 2103
MhlI GDGCHC 5 cut(s) 341, 1399, 1463, 1881, 2005
MlsI TGGCCA 2 cut(s) 595, 1794
MluNI TGGCCA 2 cut(s) 595, 1794
MlyI GAGTC 4 cut(s) 347, 356, 758, 892
Mox20I TGGCCA 2 cut(s) 595, 1794
Mph1103I ATGCAT 1 cut(s) 1435
MroXI GAANNNNTTC 3 cut(s) 387, 1217, 1863
MscI TGGCCA 2 cut(s) 595, 1794
MseI TTAA 6 cut(s) 611, 648, 792, 989, 1329, 1700
MslI CAYNNNNRTG 2 cut(s) 204, 1892
Msp20I TGGCCA 2 cut(s) 595, 1794
MspA1I CMGCKG 3 cut(s) 638, 1483, 2059
MspCI CTTAAG 1 cut(s) 791
MspI CCGG 3 cut(s) 167, 1014, 1533
MspR9I CCNGG 4 cut(s) 112, 1555, 1875, 2026
MunI CAATTG 4 cut(s) 225, 734, 1376, 1595
MvaI CCWGG 4 cut(s) 112, 1555, 1875, 2026
MwoI GCNNNNNNNGC 6 cut(s) 42, 497, 730, 1243, 1458, 1662
NcoI CCATGG 2 cut(s) 465, 1284
NdeI CATATG 1 cut(s) 442
NdeII GATC 7 cut(s) 209, 484, 775, 1316, 1606, 1861, 2103
NlaIV GGNNCC 7 cut(s) 308, 463, 1453, 1537, 1645, 1755, 2022
NmuCI GTSAC 1 cut(s) 249
NsbI TGCGCA 1 cut(s) 1743
NsiI ATGCAT 1 cut(s) 1435
NspI RCATGY 2 cut(s) 1194, 1885
NspV TTCGAA 1 cut(s) 1250
PasI CCCWGGG 2 cut(s) 1874, 2025
PciI ACATGT 1 cut(s) 1190
PdmI GAANNNNTTC 3 cut(s) 387, 1217, 1863
PfeI GAWTC 9 cut(s) 516, 584, 629, 845, 850, 1280, 1412, 1426, 1600
PkrI GCNGC 7 cut(s) 44, 1199, 1482, 1623, 1655, 2058, 2061
PleI GAGTC 4 cut(s) 347, 355, 758, 892
PpsI GAGTC 4 cut(s) 347, 355, 758, 892
Ppu21I YACGTR 1 cut(s) 827
PscI ACATGT 1 cut(s) 1190
PsiI TTATAA 1 cut(s) 963
Psp6I CCWGG 4 cut(s) 110, 1553, 1873, 2024
PspFI CCCAGC 1 cut(s) 1483
PspGI CCWGG 4 cut(s) 110, 1553, 1873, 2024
PspN4I GGNNCC 7 cut(s) 308, 463, 1453, 1537, 1645, 1755, 2022
PspPI GGNCC 1 cut(s) 1551
PstI CTGCAG 1 cut(s) 44
PsuI RGATCY 4 cut(s) 209, 1316, 1861, 2103
PvuII CAGCTG 2 cut(s) 638, 1483
RsaI GTAC 8 cut(s) 125, 198, 429, 435, 552, 756, 953, 1755
RsaNI GTAC 8 cut(s) 124, 197, 428, 434, 551, 755, 952, 1754
RseI CAYNNNNRTG 2 cut(s) 204, 1892
SaqAI TTAA 6 cut(s) 611, 648, 792, 989, 1329, 1700
SatI GCNGC 7 cut(s) 43, 1198, 1481, 1622, 1654, 2057, 2060
Sau3AI GATC 7 cut(s) 209, 484, 775, 1316, 1606, 1861, 2103
Sau96I GGNCC 1 cut(s) 1551
SchI GAGTC 4 cut(s) 347, 356, 758, 892
ScrFI CCNGG 4 cut(s) 112, 1555, 1875, 2026
SduI GDGCHC 5 cut(s) 341, 1399, 1463, 1881, 2005
SfaNI GCATC 4 cut(s) 1252, 1442, 1753, 1884
SfcI CTRYAG 2 cut(s) 40, 213
SfuI TTCGAA 1 cut(s) 1250
SinI GGWCC 1 cut(s) 1551
SmiMI CAYNNNNRTG 2 cut(s) 204, 1892
SmlI CTYRAG 5 cut(s) 29, 83, 656, 791, 1987
SmoI CTYRAG 5 cut(s) 29, 83, 656, 791, 1987
SsiI CCGC 6 cut(s) 68, 236, 1437, 1624, 1984, 2057
SspI AATATT 1 cut(s) 1327
SspMI CTAG 4 cut(s) 233, 606, 761, 1922
StyD4I CCNGG 4 cut(s) 110, 1553, 1873, 2024
StyI CCWWGG 3 cut(s) 56, 465, 1284
TaaI ACNGT 5 cut(s) 332, 475, 550, 956, 1035
TaiI ACGT 2 cut(s) 829, 969
TaqI TCGA 5 cut(s) 577, 848, 1250, 1310, 1945
TaqII GACCGA 2 cut(s) 1163, 1689
TatI WGTACW 3 cut(s) 196, 433, 754
TauI GCSGC 1 cut(s) 2059
TfiI GAWTC 9 cut(s) 516, 584, 629, 845, 850, 1280, 1412, 1426, 1600
Tru1I TTAA 6 cut(s) 611, 648, 792, 989, 1329, 1700
Tru9I TTAA 6 cut(s) 611, 648, 792, 989, 1329, 1700
TscAI CASTG 3 cut(s) 498, 869, 1546
TseFI GTSAC 1 cut(s) 249
TseI GCWGC 6 cut(s) 42, 1197, 1480, 1621, 1653, 2059
Tsp45I GTSAC 1 cut(s) 249
TspDTI ATGAA 5 cut(s) 396, 1158, 1167, 1210, 1920
TspGWI ACGGA 2 cut(s) 1418, 1931
TspRI CASTG 3 cut(s) 498, 869, 1546
Vha464I CTTAAG 1 cut(s) 791
VneI GTGCAC 1 cut(s) 337
VpaK11BI GGWCC 1 cut(s) 1551
XagI CCTNNNNNAGG 1 cut(s) 565
XapI RAATTY 2 cut(s) 1165, 1382
XbaI TCTAGA 1 cut(s) 760
XceI RCATGY 2 cut(s) 1194, 1885
XmnI GAANNNNTTC 3 cut(s) 387, 1217, 1863
XspI CTAG 4 cut(s) 233, 606, 761, 1922
Zsp2I ATGCAT 1 cut(s) 1435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.