pycom04g12270
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0012635
Physical Location & Seq
Reverse (-)
15237547 .. 15241814
4268 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g12270.2

Sequence Viewer

Length: 2136 bp
ATGGGGACTACTGCTCTGAGGCAGTTGCTGAAGAACCTGTGCAGCAATTCGCCTTGGAATTATGCTGTGTTTTGGAAGCTCAAGCACCAGAGTGATTTGATTTTGTCGTGGGAGGATGGGTACTGTCATCACCCAAAGCCAATAGAAGCTGTTGAGCATGCATCGGATGATATTTATTTCAGCAACGCAAATCAGATGCTTTTTAAAGGTTTTGCAACAAGTATACATGATGGTGGATCTACAGGATATCCAATTGGACTAGCAGTGGCTGATATGTCATATCTTCAGCACACATTTGGAAAAGGGGTTGTTGGTGAGGTGGCATGTACAGGAAACTATAGCTGGGTATTCCTTAACAATCTGTGCACCAGAGAGTCTGGTTCTAAGTTATTTCCTGAGTGTCCAGATGAATGGATTCTTCAGTTTTCATTGGGTATCAAGACAATTTTACTTGTACCTGTGCTTCCATATGGAGTTTTGCAACTTGGCTCCTTGGAGACGGTTGCTGAAGATCCAACAGTGGTTGCTTTTGTGAAAGATAGATTCAATGACATTCACAATGGTATGGGGAAAATTGTACCTTACAGTCAAGCTCAATCGTCACGGTCACAATCATCAAATTTAATGGAGACCACATTTGAGCCATCAGGTGTTACCATTAACCCACTGAAAGTTGAAAAGTCAGAAGATGTTGATAACATCAGATATAATAACCTATTGTCGACATTGGGGCACTTGTTGCCAACTGCTGAAGATTCACTTCTAGAGACCGGAACAGATCAGCCAGAAGTTCTAAAGAGTAGAGACGAAAGTGTGACTGGTGTTCCACCAATTTATCACAGTGGAGAATCAAGTCCACTCAGTCAGTCGATAGATACCAGCTTGCTGGGTATGATGGAAAGTCAGATGTTTGGGTTGTCTTGTCTGGAGGAAGAACTCCTAGCCTATTCTCAATTTGGTGGTTACAATTTGGAAGTGTTTGGAGAATCCATGAGCGATTTCACTTCTTACCCTGTTGGAGGTGTAGCTGAACTGTTCGAAGACGTTAATGCTAAAGATACAAGTTACAGCATGGTGAATAATTTCTTTAGCTTTCCTGAAACTTGTGAACTACACAAAGCACTTGGAACACTTTCGCAGAGGCAGACCGATGAAAATTTATGGGATCCATCCATTGGCATTGATGATACGTGTAGCAGCTCTAGTTTGCAGAAAGATCTGGCTAGCTGTATTGAGCCATCATGGTTTTCCAAAGGAAGTGATGCTGAGAACCTCGTGAAAGCGTTTGTAGCCAAAGATGAAACCTTGTCTAGCCGATCAGACAATATTAAATCATCTATTACCTCATCAAGTCAATTTCCCGCTTCTTTTAAACAATTGAAATTTGAAGCGTGTGCCCCAATAGGAAGTGGTTCGGTGACATGGAACCAGTCATCTGCTTTACTTGCCAGGGGTGCTACTCCAGCTTCTTTCACAGACATGATGAGCACTTTGGTTGATGAAGAGCAGCAGGGGAAAGGGTACAAATCTGTGAAGCCTAAAAGGGAACAAAAGTTATCCGGTGGCACTGCAAGGAAGACCAAGATTGGCAATAGCCCGAAGCTAAGACCAAGAGATAGACAACTGATTCAGGATCGTGTCAAGGAGCTGCGGGAACTTGTCCCAAATGGTGCCAAGTGCAGCATTGACGGCCTTTTAGACCGAACCATAAAACACATGCAGTTTTTAAGAAACATGACTGACCAAGCTGAAAAACTGAAGTGCTACACACAGCAAGAGGCACCTCGTTCCAATACCATGAGCGAAGCCACAAGTGGCTGTGAAAATGGGACAAGCAGGGCTTTTGAAGTTGGAAGCGAACACCAGATTTGCCCCATTGTGGTAGAAGATCTTGAACACTCGGGACACATTCTCATAGAGATGCTATGTGATGAACATGGACTTTTCTTAGACATAGCCCAAGCTATCCGACGGTTGGAACTGACTATCTTGAAGGGTGTCATGGAAACTCGCTTAAGCAACATGTGGGCACACTTTGTTGTTGAGGCTCCATTGGGGTTTCACAGAATGGATGTGTTTTGGCCACTGCTGCATCTTCTGCAACGCAGAAGAAGTTCAATATCAAGCAGGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bHLH-MYC_N

Protein Analysis

712

Amino Acids

78.78

Weight (kDa)

5.23

Isoelectric Point (pI)

48.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012635)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g13090 FvH4_6g13090 FvH4_6g13090 FvH4_6g13090 FvH4_6g13090
malus_domestica MD04G1135600.v1.1 MD12G1149300.v1.1
prunus_persica Prupe.6G260900_v2.0.a1
pyrus_communis pycom04g12270 pycom12g14310
rosa_chinensis RchiOBHm_Chr3g0465361
rosa_laevigata RLG00000024643
rosa_multiflora Rmu_sc0011781.1_g000003
rosa_roxburghii Rroxscaffold_6G00415100
rosa_rugosa Rorug03G0076300
rosa_samantha Rh3BG141300 Rh3CG142400 Rh3DG142400
rosa_wichuraiana Rw3G011560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1670, 1780
AccB7I CCANNNNNTGG 1 cut(s) 1175
AccI GTMKAC 2 cut(s) 223, 722
AciI CCGC 2 cut(s) 1362, 1651
AclWI GGATC 5 cut(s) 244, 506, 1160, 1173, 1641
AcoI YGGCCR 1 cut(s) 2081
AcsI RAATTY 3 cut(s) 619, 1156, 1382
AcuI CTGAAG 6 cut(s) 50, 269, 404, 528, 771, 1778
AfaI GTAC 5 cut(s) 122, 328, 456, 579, 1523
AfiI CCNNNNNNNGG 4 cut(s) 1019, 1175, 1879, 1975
AflII CTTAAG 1 cut(s) 2014
AflIII ACRYGT 2 cut(s) 1190, 2022
AgsI TTSAA 8 cut(s) 547, 677, 1381, 1388, 1847, 1895, 1993, 2118
AjnI CCWGG 1 cut(s) 1448
AleI CACNNNNGTG 1 cut(s) 90
Alw21I GWGCWC 2 cut(s) 368, 1490
Alw26I GTCTC 4 cut(s) 491, 623, 761, 798
Alw44I GTGCAC 1 cut(s) 364
AlwI GGATC 5 cut(s) 244, 506, 1160, 1173, 1641
AlwNI CAGNNNCTG 2 cut(s) 28, 269
Ama87I CYCGRG 1 cut(s) 1900
AoxI GGCC 2 cut(s) 1690, 2081
ApaLI GTGCAC 1 cut(s) 364
ApeKI GCWGC 6 cut(s) 42, 1197, 1507, 1648, 1680, 2089
ApoI RAATTY 3 cut(s) 619, 1156, 1382
Asp700I GAANNNNTTC 5 cut(s) 414, 1082, 1132, 1411, 2113
AsuHPI GGTGA 4 cut(s) 122, 326, 1087, 1429
AsuII TTCGAA 1 cut(s) 1038
AsuNHI GCTAGC 1 cut(s) 1223
AvaI CYCGRG 1 cut(s) 1900
BaeGI GKGCMC 4 cut(s) 368, 735, 1399, 2032
BalI TGGCCA 1 cut(s) 2083
BamHI GGATCC 1 cut(s) 1165
BanI GGYRCC 2 cut(s) 1670, 1780
BarI GAAGNNNNNNTAC 2 cut(s) 447, 479
BauI CACGAG 1 cut(s) 1274
BbsI GAAGAC 2 cut(s) 1047, 1583
Bbv12I GWGCWC 2 cut(s) 368, 1490
BbvI GCAGC 6 cut(s) 54, 1209, 1519, 1635, 1692, 2076
BccI CCATC 6 cut(s) 110, 224, 652, 889, 1177, 1246
BceAI ACGGC 1 cut(s) 1705
BciT130I CCWGG 1 cut(s) 1450
BcoDI GTCTC 4 cut(s) 491, 623, 761, 798
BfaI CTAG 6 cut(s) 260, 764, 941, 1203, 1224, 1311
BfmI CTRYAG 2 cut(s) 240, 337
BfrI CTTAAG 1 cut(s) 2014
BglII AGATCT 2 cut(s) 1216, 1888
BisI GCNGC 6 cut(s) 43, 1198, 1508, 1649, 1681, 2090
BlsI GCNGC 6 cut(s) 44, 1199, 1509, 1650, 1682, 2091
Bme1390I CCNGG 1 cut(s) 1450
BmeT110I CYCGRG 1 cut(s) 1900
BmiI GGNNCC 6 cut(s) 490, 1167, 1427, 1672, 1782, 2049
BmrFI CCNGG 1 cut(s) 1450
BmsI GCATC 5 cut(s) 170, 186, 1252, 1911, 2101
BmtI GCTAGC 1 cut(s) 1227
BpiI GAAGAC 2 cut(s) 1047, 1583
BpmI CTGGAG 2 cut(s) 947, 1446
Bpu14I TTCGAA 1 cut(s) 1038
BpuEI CTTGAG 1 cut(s) 65
BsaAI YACGTR 1 cut(s) 1191
BsaI GGTCTC 2 cut(s) 623, 761
BsaJI CCNNGG 3 cut(s) 53, 492, 1449
BsaWI WCCGGW 2 cut(s) 770, 1559
BsaXI ACNNNNNCTCC 2 cut(s) 104, 134
Bsc4I CCNNNNNNNGG 4 cut(s) 1019, 1175, 1879, 1975
Bse1I ACTGG 2 cut(s) 823, 1429
BseBI CCWGG 1 cut(s) 1450
BseDI CCNNGG 3 cut(s) 53, 492, 1449
BseGI GGATG 4 cut(s) 121, 172, 1169, 2077
BseLI CCNNNNNNNGG 4 cut(s) 1019, 1175, 1879, 1975
BseMII CTCAG 4 cut(s) 8, 387, 874, 1257
BseNI ACTGG 2 cut(s) 823, 1429
BseSI GKGCMC 4 cut(s) 368, 735, 1399, 2032
BseXI GCAGC 6 cut(s) 54, 1209, 1519, 1635, 1692, 2076
BseYI CCCAGC 2 cut(s) 342, 886
BsgI GTGCAG 2 cut(s) 61, 1699
BshFI GGCC 2 cut(s) 1692, 2083
BshNI GGYRCC 2 cut(s) 1670, 1780
BsiHKAI GWGCWC 2 cut(s) 368, 1490
BsiHKCI CYCGRG 1 cut(s) 1900
BsiSI CCGG 2 cut(s) 771, 1560
BslFI GGGAC 4 cut(s) 19, 1646, 1843, 1917
BslI CCNNNNNNNGG 4 cut(s) 1019, 1175, 1879, 1975
BsmAI GTCTC 4 cut(s) 491, 623, 761, 798
BsmBI CGTCTC 2 cut(s) 491, 798
BsmFI GGGAC 4 cut(s) 19, 1646, 1843, 1917
BsnI GGCC 2 cut(s) 1692, 2083
Bso31I GGTCTC 2 cut(s) 623, 761
BsoBI CYCGRG 1 cut(s) 1900
Bsp119I TTCGAA 1 cut(s) 1038
Bsp1286I GDGCHC 5 cut(s) 368, 735, 1399, 1490, 2032
Bsp1407I TGTACA 1 cut(s) 326
Bsp143I GATC 8 cut(s) 236, 511, 778, 1165, 1216, 1316, 1633, 1888
BspACI CCGC 2 cut(s) 1362, 1651
BspANI GGCC 2 cut(s) 1692, 2083
BspCNI CTCAG 4 cut(s) 9, 388, 873, 1258
BspLI GGNNCC 6 cut(s) 490, 1167, 1427, 1672, 1782, 2049
BspOI GCTAGC 1 cut(s) 1227
BspPI GGATC 5 cut(s) 244, 506, 1160, 1173, 1641
BspQI GCTCTTC 1 cut(s) 1497
BspT104I TTCGAA 1 cut(s) 1038
BspT107I GGYRCC 2 cut(s) 1670, 1780
BspTI CTTAAG 1 cut(s) 2014
BspTNI GGTCTC 2 cut(s) 623, 761
BsrGI TGTACA 1 cut(s) 326
BsrI ACTGG 2 cut(s) 823, 1429
BssECI CCNNGG 3 cut(s) 53, 492, 1449
BssMI GATC 8 cut(s) 236, 511, 778, 1165, 1216, 1316, 1633, 1888
BssNAI GTATAC 1 cut(s) 224
BssSI CACGAG 1 cut(s) 1274
BssT1I CCWWGG 2 cut(s) 53, 492
Bst1107I GTATAC 1 cut(s) 224
Bst2BI CACGAG 1 cut(s) 1274
Bst2UI CCWGG 1 cut(s) 1450
Bst4CI ACNGT 8 cut(s) 125, 502, 520, 587, 606, 842, 1035, 1974
Bst6I CTCTTC 1 cut(s) 1497
BstAFI CTTAAG 1 cut(s) 2014
BstAPI GCANNNNNTGC 2 cut(s) 739, 2098
BstAUI TGTACA 1 cut(s) 326
BstBAI YACGTR 1 cut(s) 1191
BstBI TTCGAA 1 cut(s) 1038
BstC8I GCNNGC 3 cut(s) 159, 884, 1225
BstDEI CTNAG 7 cut(s) 17, 384, 396, 860, 1266, 1604, 1948
BstENI CCTNNNNNAGG 1 cut(s) 1017
BstF5I GGATG 4 cut(s) 121, 172, 1169, 2077
BstKTI GATC 8 cut(s) 239, 514, 781, 1168, 1219, 1319, 1636, 1891
BstMAI GTCTC 4 cut(s) 491, 623, 761, 798
BstMBI GATC 8 cut(s) 236, 511, 778, 1165, 1216, 1316, 1633, 1888
BstMWI GCNNNNNNNGC 8 cut(s) 739, 1289, 1445, 1454, 1463, 1689, 2089, 2098
BstNI CCWGG 1 cut(s) 1450
BstNSI RCATGY 4 cut(s) 161, 327, 1720, 2026
BstSCI CCNGG 1 cut(s) 1448
BstSFI CTRYAG 2 cut(s) 240, 337
BstSLI GKGCMC 4 cut(s) 368, 735, 1399, 2032
BstV1I GCAGC 6 cut(s) 54, 1209, 1519, 1635, 1692, 2076
BstV2I GAAGAC 2 cut(s) 1047, 1583
BstX2I RGATCY 5 cut(s) 236, 511, 1165, 1216, 1888
BstXI CCANNNNNNTGG 2 cut(s) 411, 886
BstYI RGATCY 5 cut(s) 236, 511, 1165, 1216, 1888
BstZ17I GTATAC 1 cut(s) 224
BsuRI GGCC 2 cut(s) 1692, 2083
BtsCI GGATG 4 cut(s) 121, 172, 1169, 2077
BtsI GCAGTG 3 cut(s) 270, 1566, 2084
BtsIMutI CAGTG 6 cut(s) 270, 525, 665, 847, 1566, 2084
Cac8I GCNNGC 3 cut(s) 159, 884, 1225
CaiI CAGNNNCTG 2 cut(s) 28, 269
Csp6I GTAC 5 cut(s) 121, 327, 455, 578, 1522
CviQI GTAC 5 cut(s) 121, 327, 455, 578, 1522
DdeI CTNAG 7 cut(s) 17, 384, 396, 860, 1266, 1604, 1948
DpnI GATC 8 cut(s) 238, 513, 780, 1167, 1218, 1318, 1635, 1890
DpnII GATC 8 cut(s) 236, 511, 778, 1165, 1216, 1316, 1633, 1888
DraI TTTAAA 2 cut(s) 205, 1372
EaeI YGGCCR 1 cut(s) 2081
Eam1104I CTCTTC 1 cut(s) 1497
EarI CTCTTC 1 cut(s) 1497
Eco130I CCWWGG 2 cut(s) 53, 492
Eco31I GGTCTC 2 cut(s) 623, 761
Eco32I GATATC 1 cut(s) 248
Eco57I CTGAAG 6 cut(s) 50, 269, 404, 528, 771, 1778
Eco88I CYCGRG 1 cut(s) 1900
EcoNI CCTNNNNNAGG 1 cut(s) 1017
EcoRII CCWGG 1 cut(s) 1448
EcoRV GATATC 1 cut(s) 248
EcoT14I CCWWGG 2 cut(s) 53, 492
EcoT22I ATGCAT 1 cut(s) 163
ErhI CCWWGG 2 cut(s) 53, 492
Esp3I CGTCTC 2 cut(s) 491, 798
FalI AAGNNNNNCTT 4 cut(s) 744, 776, 1825, 1857
FaqI GGGAC 4 cut(s) 19, 1646, 1843, 1917
FauI CCCGC 2 cut(s) 1369, 1644
FauNDI CATATG 1 cut(s) 469
FblI GTMKAC 2 cut(s) 223, 722
Fnu4HI GCNGC 6 cut(s) 43, 1198, 1508, 1649, 1681, 2090
FokI GGATG 4 cut(s) 128, 179, 1156, 2084
Fsp4HI GCNGC 6 cut(s) 43, 1198, 1508, 1649, 1681, 2090
FspBI CTAG 6 cut(s) 260, 764, 941, 1203, 1224, 1311
GluI GCNGC 6 cut(s) 43, 1198, 1508, 1649, 1681, 2090
GsaI CCCAGC 2 cut(s) 346, 890
GsuI CTGGAG 2 cut(s) 947, 1446
HaeIII GGCC 2 cut(s) 1692, 2083
HapII CCGG 2 cut(s) 771, 1560
HincII GTYRAC 1 cut(s) 723
HindII GTYRAC 1 cut(s) 723
HinfI GANTC 7 cut(s) 374, 415, 543, 755, 848, 986, 1627
HpaII CCGG 2 cut(s) 771, 1560
HphI GGTGA 4 cut(s) 122, 326, 1087, 1429
Hpy166II GTNNAC 5 cut(s) 224, 366, 723, 857, 1109
Hpy188I TCNGA 8 cut(s) 18, 166, 195, 685, 704, 906, 1321, 1970
Hpy8I GTNNAC 5 cut(s) 224, 366, 723, 857, 1109
Hpy99I CGWCG 1 cut(s) 1974
HpyAV CCTTC 1 cut(s) 1987
HpyCH4III ACNGT 8 cut(s) 125, 502, 520, 587, 606, 842, 1035, 1974
HpyCH4IV ACGT 2 cut(s) 1044, 1190
HpyF10VI GCNNNNNNNGC 8 cut(s) 739, 1289, 1445, 1454, 1463, 1689, 2089, 2098
HpyF3I CTNAG 7 cut(s) 17, 384, 396, 860, 1266, 1604, 1948
HpySE526I ACGT 2 cut(s) 1044, 1190
Kzo9I GATC 8 cut(s) 236, 511, 778, 1165, 1216, 1316, 1633, 1888
LguI GCTCTTC 1 cut(s) 1497
LmnI GCTCC 3 cut(s) 494, 1645, 2053
Lsp1109I GCAGC 6 cut(s) 54, 1209, 1519, 1635, 1692, 2076
LweI GCATC 5 cut(s) 170, 186, 1252, 1911, 2101
MaeI CTAG 6 cut(s) 260, 764, 941, 1203, 1224, 1311
MaeII ACGT 2 cut(s) 1044, 1190
MaeIII GTNAC 7 cut(s) 600, 606, 652, 814, 962, 1064, 1417
MalI GATC 8 cut(s) 238, 513, 780, 1167, 1218, 1318, 1635, 1890
MboI GATC 8 cut(s) 236, 511, 778, 1165, 1216, 1316, 1633, 1888
MfeI CAATTG 2 cut(s) 252, 1376
MflI RGATCY 5 cut(s) 236, 511, 1165, 1216, 1888
MhlI GDGCHC 5 cut(s) 368, 735, 1399, 1490, 2032
MlsI TGGCCA 1 cut(s) 2083
MluNI TGGCCA 1 cut(s) 2083
MlyI GAGTC 1 cut(s) 383
MmeI TCCRAC 5 cut(s) 539, 997, 1831, 1956, 1993
Mox20I TGGCCA 1 cut(s) 2083
Mph1103I ATGCAT 1 cut(s) 163
MroXI GAANNNNTTC 5 cut(s) 414, 1082, 1132, 1411, 2113
MscI TGGCCA 1 cut(s) 2083
MseI TTAA 9 cut(s) 204, 354, 623, 660, 1047, 1329, 1371, 1727, 2015
MslI CAYNNNNRTG 4 cut(s) 90, 231, 1478, 1919
Msp20I TGGCCA 1 cut(s) 2083
MspCI CTTAAG 1 cut(s) 2014
MspI CCGG 2 cut(s) 771, 1560
MspR9I CCNGG 1 cut(s) 1450
MunI CAATTG 2 cut(s) 252, 1376
MvaI CCWGG 1 cut(s) 1450
MwoI GCNNNNNNNGC 8 cut(s) 739, 1289, 1445, 1454, 1463, 1689, 2089, 2098
NdeI CATATG 1 cut(s) 469
NdeII GATC 8 cut(s) 236, 511, 778, 1165, 1216, 1316, 1633, 1888
NheI GCTAGC 1 cut(s) 1223
NlaIV GGNNCC 6 cut(s) 490, 1167, 1427, 1672, 1782, 2049
NmuCI GTSAC 4 cut(s) 600, 606, 814, 1417
NsiI ATGCAT 1 cut(s) 163
NspI RCATGY 4 cut(s) 161, 327, 1720, 2026
NspV TTCGAA 1 cut(s) 1038
OliI CACNNNNGTG 1 cut(s) 90
PaeI GCATGC 1 cut(s) 161
PciI ACATGT 1 cut(s) 2022
PciSI GCTCTTC 1 cut(s) 1497
PdmI GAANNNNTTC 5 cut(s) 414, 1082, 1132, 1411, 2113
PfeI GAWTC 6 cut(s) 415, 543, 755, 848, 986, 1627
PflMI CCANNNNNTGG 1 cut(s) 1175
PkrI GCNGC 6 cut(s) 44, 1199, 1509, 1650, 1682, 2091
PleI GAGTC 1 cut(s) 382
PpsI GAGTC 1 cut(s) 382
Ppu21I YACGTR 1 cut(s) 1191
PscI ACATGT 1 cut(s) 2022
Psp6I CCWGG 1 cut(s) 1448
PspFI CCCAGC 2 cut(s) 342, 886
PspGI CCWGG 1 cut(s) 1448
PspN4I GGNNCC 6 cut(s) 490, 1167, 1427, 1672, 1782, 2049
PstNI CAGNNNCTG 2 cut(s) 28, 269
PsuI RGATCY 5 cut(s) 236, 511, 1165, 1216, 1888
RsaI GTAC 5 cut(s) 122, 328, 456, 579, 1523
RsaNI GTAC 5 cut(s) 121, 327, 455, 578, 1522
RseI CAYNNNNRTG 4 cut(s) 90, 231, 1478, 1919
SalI GTCGAC 1 cut(s) 721
SapI GCTCTTC 1 cut(s) 1497
SaqAI TTAA 9 cut(s) 204, 354, 623, 660, 1047, 1329, 1371, 1727, 2015
SatI GCNGC 6 cut(s) 43, 1198, 1508, 1649, 1681, 2090
Sau3AI GATC 8 cut(s) 236, 511, 778, 1165, 1216, 1316, 1633, 1888
SchI GAGTC 1 cut(s) 383
ScrFI CCNGG 1 cut(s) 1450
SduI GDGCHC 5 cut(s) 368, 735, 1399, 1490, 2032
SfaNI GCATC 5 cut(s) 170, 186, 1252, 1911, 2101
SfcI CTRYAG 2 cut(s) 240, 337
SfuI TTCGAA 1 cut(s) 1038
SmiMI CAYNNNNRTG 4 cut(s) 90, 231, 1478, 1919
SmlI CTYRAG 2 cut(s) 80, 2014
SmoI CTYRAG 2 cut(s) 80, 2014
SphI GCATGC 1 cut(s) 161
SsiI CCGC 2 cut(s) 1362, 1651
SspI AATATT 1 cut(s) 1327
SspMI CTAG 6 cut(s) 260, 764, 941, 1203, 1224, 1311
StyD4I CCNGG 1 cut(s) 1448
StyI CCWWGG 2 cut(s) 53, 492
TaaI ACNGT 8 cut(s) 125, 502, 520, 587, 606, 842, 1035, 1974
TaiI ACGT 2 cut(s) 1047, 1193
TaqI TCGA 3 cut(s) 722, 869, 1038
TaqII GACCGA 2 cut(s) 1163, 1716
TatI WGTACW 1 cut(s) 326
TfiI GAWTC 6 cut(s) 415, 543, 755, 848, 986, 1627
Tru1I TTAA 9 cut(s) 204, 354, 623, 660, 1047, 1329, 1371, 1727, 2015
Tru9I TTAA 9 cut(s) 204, 354, 623, 660, 1047, 1329, 1371, 1727, 2015
TscAI CASTG 6 cut(s) 270, 525, 672, 847, 1573, 2091
TseFI GTSAC 4 cut(s) 600, 606, 814, 1417
TseI GCWGC 6 cut(s) 42, 1197, 1507, 1648, 1680, 2089
Tsp45I GTSAC 4 cut(s) 600, 606, 814, 1417
TspDTI ATGAA 6 cut(s) 417, 423, 1167, 1314, 1515, 1947
TspRI CASTG 6 cut(s) 270, 525, 672, 847, 1573, 2091
Van91I CCANNNNNTGG 1 cut(s) 1175
Vha464I CTTAAG 1 cut(s) 2014
VneI GTGCAC 1 cut(s) 364
XagI CCTNNNNNAGG 1 cut(s) 1017
XapI RAATTY 3 cut(s) 619, 1156, 1382
XbaI TCTAGA 1 cut(s) 763
XceI RCATGY 4 cut(s) 161, 327, 1720, 2026
XmiI GTMKAC 2 cut(s) 223, 722
XmnI GAANNNNTTC 5 cut(s) 414, 1082, 1132, 1411, 2113
XspI CTAG 6 cut(s) 260, 764, 941, 1203, 1224, 1311
Zsp2I ATGCAT 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.