RchiOBHm_Chr3g0465361
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0012635
Physical Location & Seq
Forward (+)
12152414 .. 12157332
4919 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43152

Sequence Viewer

Length: 2079 bp
ATGGGGACTACTGCTCTGAGGCAGTTATTGAAGACCCTCTGCAGCAATTCGCTTTGGACTTATGGGGTCTTTTGGAAGCTCAAGCATCAGACCGATTTGATTTTGAGCTGGGAGGATGGGTACTGTCACCAACCAAAACCAAGAGAAACTGTGGATCGTGCAACAGATAGTATCTACTTTGGTGAGGCGAATGAGATATCTTTTAAGAAGTGTGCAACAGGCATGCATGAAGGTGGATCTGCGGGGTATCCAATTGGACTGGCAGTGGCCGATATGTCACATCTTCATTACACATTTGGAAAGGGGGTAGTCGGTGAGGTTGCAAGTACAGGAAACCATAGCTGGGTGCTCCTCGATGGTTTGCGCACCAGCGTATCTGACTCTAACTTAGTTTCGGATTGTCCAGATGAGTGGTTGCTTCAGTTTGCATTGGGCGTCAAGACAATTTTGCTTGTACCTGTACTTCCACATGGAGTTTTGCAATTTGGCTCCTTGGAAACGGTTGATGAAGATCTGGCAGTAGTTGCTTTTATGAAAGACAGATTCAATGATATTCACAATCTCATGGGGAAAGCTGTACCTTCCAACTTAAATAGGGGCATTCAAGCTCCATATTCTTGGTCACTTTTATCTGGTTTAATGGAGAACACATATGAGTCATCAACTGTTGGCATTAACCCACTGAAAGTTGAAACGTCAGAAGATATTGGCAACAACAGACGGAATGATAACCTACTGTCGACTTTGGAGCAATTCATGCAATTTCCAACCATTGAAGATCCACATTTTGGAATAGATCCATCAGTTCTTAAAAATGCAGGTGAATGTGAGATTGGTGTTCCGGCATTTTGTTCCACTGGAGAAGCAAATACAGTCAATCAGTCTACACACACTAGTGTGCTGGATATGGTGGAAAATCAGATATTTGGGTTGTCTTGTCAGGAGGAAGAACTTTTTGCCTTTTCTCAGAATGGTGGTTATAATTTTGGAGTTTTTGGAGAATCCTTTGGAGGTTTCAATTCTAACACCGCTGGAAGTGCAGCAGAACAACTGTTCAAATTCAATAATGATACAAGGCACAACAGTGTGAATAATTTCTTTGAATTTCCTGAAACTAGTGAGCTACACAAAGCACTTGGAACATCTTTCCAGAGACAAACCAATGAACAGTTATGGGATTTATCCATCTCCATTGATGATACATGTAGCAGCTCTGGTGTGCAGAAAGATCTTATTAGCAGCATTAACCCACCATGGTTTTCCAACGGATGTGATGCTGAGAACCTCTTGGAAGCTTCAGTAGCCAAAGATGACACATCATCTAGCATATCAGATGGTATTAAATCATGTACAACCTCATCAAGACAATTTTCTGCTTCCTATAAACAATTGAAATTTGAAGAGGGCGGTCCGATGGAATGTGAACCAATGATATGGAGCCATACATCTGCTTTGCCTGCCACGCGCAAGACTTCATCTTCTTTCACAGGCATGATGAACACTGTGGTTGACGATGAGCAGGAAGAAAAGGGAACAAAAGGACACACTCCTACTCAGCCTAAAAGGGAACAGAAGTTGTCCGGCACCAATGCAAGAAGGGCCAAACCTGGCAATAGCCCAAAGCTAAGACCAAGAGATAGACAACTGATTCAGGATCGTGTCAAGGAACTTCGAGAACTTGTCCCAAATGGTGCCAAGTGCAGCATTGATGGCCTTTTGGACCGAACAATAAAACACATGATGTATTTAAGAAGCATGACTAACCAAGCTGAAAAATTGAAGTCCTATGCACATCAAGATCAAGAGGCACCTCATTGCAATAACACAAATGAGACCCCAAGTGGTTCCTCAAATGGCACAAGCAGGGCTTTTGAACTTGGAAATGAACTCCAGATTAGTCCCATTGTAGTGGAAGATCTCGAACACCCAGGGCATATGCTCATAGAGATGCTATGTGATGAACACGGGCTCTTTCTTGAAATCGCCCAAGCTATCAGACGGTTGGAGTTAACAGTGTTGAAGGGTGTGATGGAAACCCGCTCAAACAACTTGTGGGCACATTTTGTTGTTGAGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bHLH-MYC_N

Protein Analysis

692

Amino Acids

76.49

Weight (kDa)

5.11

Isoelectric Point (pI)

35.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 6 - 182 1.7e-30 bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH_LHW PF23176 543 - 597 9.2e-29 Transcription factor LHW bHLH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012635)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g13090 FvH4_6g13090 FvH4_6g13090 FvH4_6g13090 FvH4_6g13090
malus_domestica MD04G1135600.v1.1 MD12G1149300.v1.1
prunus_persica Prupe.6G260900_v2.0.a1
pyrus_communis pycom04g12270 pycom12g14310
rosa_chinensis RchiOBHm_Chr3g0465361
rosa_laevigata RLG00000024643
rosa_multiflora Rmu_sc0011781.1_g000003
rosa_roxburghii Rroxscaffold_6G00415100
rosa_rugosa Rorug03G0076300
rosa_samantha Rh3BG141300 Rh3CG142400 Rh3DG142400
rosa_wichuraiana Rw3G011560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 981
AarI CACCTGC 1 cut(s) 809
Acc16I TGCGCA 1 cut(s) 365
Acc36I ACCTGC 1 cut(s) 809
AccB1I GGYRCC 3 cut(s) 1583, 1691, 1807
AccB7I CCANNNNNTGG 1 cut(s) 788
AccBSI CCGCTC 1 cut(s) 2040
AccI GTMKAC 2 cut(s) 740, 884
AccII CGCG 1 cut(s) 1465
AciI CCGC 4 cut(s) 242, 1029, 1407, 2038
AclWI GGATC 5 cut(s) 162, 244, 773, 791, 1662
AcoI YGGCCR 1 cut(s) 267
AcsI RAATTY 3 cut(s) 1058, 1103, 1394
AcuI CTGAAG 2 cut(s) 404, 1281
AcyI GRCGYC 1 cut(s) 435
AfaI GTAC 6 cut(s) 122, 328, 456, 462, 579, 1351
AfiI CCNNNNNNNGG 2 cut(s) 343, 788
AflIII ACRYGT 1 cut(s) 1202
AhlI ACTAGT 2 cut(s) 893, 1115
AjnI CCWGG 2 cut(s) 1606, 1927
AjuI GAANNNNNNNTTGG 2 cut(s) 816, 848
AleI CACNNNNGTG 3 cut(s) 894, 896, 1083
Alw21I GWGCWC 1 cut(s) 351
Alw26I GTCTC 2 cut(s) 1147, 1826
AlwI GGATC 5 cut(s) 162, 244, 773, 791, 1662
AoxI GGCC 3 cut(s) 267, 1599, 1711
ApeKI GCWGC 5 cut(s) 42, 1040, 1209, 1239, 1701
ApoI RAATTY 3 cut(s) 1058, 1103, 1394
Asp700I GAANNNNTTC 1 cut(s) 1094
AspLEI GCGC 2 cut(s) 366, 1467
AspS9I GGNCC 3 cut(s) 1409, 1599, 1720
AsuHPI GGTGA 4 cut(s) 119, 194, 326, 833
AvaII GGWCC 2 cut(s) 1409, 1720
BaeGI GKGCMC 1 cut(s) 2059
BaeI ACNNNNGTAYC 2 cut(s) 357, 390
BanI GGYRCC 3 cut(s) 1583, 1691, 1807
BanII GRGCYC 1 cut(s) 1971
BarI GAAGNNNNNNTAC 2 cut(s) 447, 479
BbsI GAAGAC 1 cut(s) 38
Bbv12I GWGCWC 1 cut(s) 351
BbvI GCAGC 5 cut(s) 54, 1052, 1221, 1251, 1713
BccI CCATC 8 cut(s) 110, 350, 808, 1193, 1328, 1408, 1703, 2023
BciT130I CCWGG 2 cut(s) 1608, 1929
BciVI GTATCC 1 cut(s) 258
BcoDI GTCTC 2 cut(s) 1147, 1826
BcuI ACTAGT 2 cut(s) 893, 1115
BfaI CTAG 3 cut(s) 894, 1116, 1323
BfmI CTRYAG 1 cut(s) 40
BfuAI ACCTGC 1 cut(s) 809
BfuI GTATCC 1 cut(s) 258
BglII AGATCT 3 cut(s) 511, 1228, 1915
BisI GCNGC 5 cut(s) 43, 1041, 1210, 1240, 1702
BlsI GCNGC 5 cut(s) 44, 1042, 1211, 1241, 1703
Bme1390I CCNGG 2 cut(s) 1608, 1929
Bme18I GGWCC 2 cut(s) 1409, 1720
BmgT120I GGNCC 3 cut(s) 1409, 1599, 1720
BmiI GGNNCC 6 cut(s) 490, 1439, 1585, 1693, 1809, 1846
BmrFI CCNGG 2 cut(s) 1608, 1929
BmsI GCATC 3 cut(s) 94, 1264, 1938
BpiI GAAGAC 1 cut(s) 38
BpmI CTGGAG 2 cut(s) 879, 1874
BpuEI CTTGAG 1 cut(s) 65
BsaBI GATNNNNATC 1 cut(s) 510
BsaHI GRCGYC 1 cut(s) 435
BsaI GGTCTC 1 cut(s) 1826
BsaJI CCNNGG 4 cut(s) 492, 1253, 1927, 1928
BsaXI ACNNNNNCTCC 2 cut(s) 104, 134
Bsc4I CCNNNNNNNGG 2 cut(s) 343, 788
Bse1I ACTGG 2 cut(s) 264, 862
Bse3DI GCAATG 1 cut(s) 1813
Bse8I GATNNNNATC 1 cut(s) 510
BseBI CCWGG 2 cut(s) 1608, 1929
BseDI CCNNGG 4 cut(s) 492, 1253, 1927, 1928
BseGI GGATG 2 cut(s) 121, 1274
BseJI GATNNNNATC 1 cut(s) 510
BseLI CCNNNNNNNGG 2 cut(s) 343, 788
BseMI GCAATG 1 cut(s) 1813
BseMII CTCAG 4 cut(s) 8, 980, 1269, 1568
BseNI ACTGG 2 cut(s) 264, 862
BseRI GAGGAG 1 cut(s) 341
BseSI GKGCMC 1 cut(s) 2059
BseXI GCAGC 5 cut(s) 54, 1052, 1221, 1251, 1713
BseYI CCCAGC 2 cut(s) 108, 342
BsgI GTGCAG 3 cut(s) 1059, 1241, 1720
Bsh1236I CGCG 1 cut(s) 1465
BshFI GGCC 3 cut(s) 269, 1601, 1713
BshNI GGYRCC 3 cut(s) 1583, 1691, 1807
BsiHKAI GWGCWC 1 cut(s) 351
BsiSI CCGG 2 cut(s) 842, 1581
BslFI GGGAC 3 cut(s) 19, 1667, 1884
BslI CCNNNNNNNGG 2 cut(s) 343, 788
BsmAI GTCTC 2 cut(s) 1147, 1826
BsmFI GGGAC 3 cut(s) 19, 1667, 1884
BsmI GAATGC 1 cut(s) 600
BsnI GGCC 3 cut(s) 269, 1601, 1713
Bso31I GGTCTC 1 cut(s) 1826
Bsp1286I GDGCHC 3 cut(s) 351, 1971, 2059
Bsp1407I TGTACA 1 cut(s) 1349
Bsp143I GATC 9 cut(s) 154, 236, 511, 778, 796, 1228, 1654, 1798, 1915
Bsp19I CCATGG 1 cut(s) 1253
BspACI CCGC 4 cut(s) 242, 1029, 1407, 2038
BspANI GGCC 3 cut(s) 269, 1601, 1713
BspCNI CTCAG 4 cut(s) 9, 979, 1270, 1567
BspFNI CGCG 1 cut(s) 1465
BspLI GGNNCC 6 cut(s) 490, 1439, 1585, 1693, 1809, 1846
BspMAI CTGCAG 1 cut(s) 44
BspMI ACCTGC 1 cut(s) 809
BspPI GGATC 5 cut(s) 162, 244, 773, 791, 1662
BspT107I GGYRCC 3 cut(s) 1583, 1691, 1807
BspTNI GGTCTC 1 cut(s) 1826
BsrBI CCGCTC 1 cut(s) 2040
BsrDI GCAATG 1 cut(s) 1813
BsrGI TGTACA 1 cut(s) 1349
BsrI ACTGG 2 cut(s) 264, 862
BssECI CCNNGG 4 cut(s) 492, 1253, 1927, 1928
BssMI GATC 9 cut(s) 154, 236, 511, 778, 796, 1228, 1654, 1798, 1915
BssNI GRCGYC 1 cut(s) 435
BssT1I CCWWGG 2 cut(s) 492, 1253
Bst2UI CCWGG 2 cut(s) 1608, 1929
Bst6I CTCTTC 1 cut(s) 1395
BstACI GRCGYC 1 cut(s) 435
BstAPI GCANNNNNTGC 2 cut(s) 524, 757
BstAUI TGTACA 1 cut(s) 1349
BstC8I GCNNGC 2 cut(s) 224, 1458
BstDEI CTNAG 6 cut(s) 17, 388, 966, 1278, 1554, 1625
BstDSI CCRYGG 1 cut(s) 1253
BstF5I GGATG 2 cut(s) 121, 1274
BstFNI CGCG 1 cut(s) 1465
BstHHI GCGC 2 cut(s) 366, 1467
BstKTI GATC 9 cut(s) 157, 239, 514, 781, 799, 1231, 1657, 1801, 1918
BstMAI GTCTC 2 cut(s) 1147, 1826
BstMBI GATC 9 cut(s) 154, 236, 511, 778, 796, 1228, 1654, 1798, 1915
BstMWI GCNNNNNNNGC 8 cut(s) 524, 757, 1037, 1301, 1457, 1462, 1598, 1710
BstNI CCWGG 2 cut(s) 1608, 1929
BstNSI RCATGY 2 cut(s) 226, 1206
BstSCI CCNGG 2 cut(s) 1606, 1927
BstSFI CTRYAG 1 cut(s) 40
BstSLI GKGCMC 1 cut(s) 2059
BstUI CGCG 1 cut(s) 1465
BstV1I GCAGC 5 cut(s) 54, 1052, 1221, 1251, 1713
BstV2I GAAGAC 1 cut(s) 38
BstX2I RGATCY 6 cut(s) 236, 511, 778, 796, 1228, 1915
BstXI CCANNNNNNTGG 4 cut(s) 411, 618, 1434, 1909
BstYI RGATCY 6 cut(s) 236, 511, 778, 796, 1228, 1915
BsuI GTATCC 1 cut(s) 258
BsuRI GGCC 3 cut(s) 269, 1601, 1713
BtgI CCRYGG 1 cut(s) 1253
BtsCI GGATG 2 cut(s) 121, 1274
BtsI GCAGTG 1 cut(s) 270
BtsIMutI CAGTG 6 cut(s) 270, 680, 855, 1090, 1500, 2019
BveI ACCTGC 1 cut(s) 809
Cac8I GCNNGC 2 cut(s) 224, 1458
CfoI GCGC 2 cut(s) 366, 1467
Cfr13I GGNCC 3 cut(s) 1409, 1599, 1720
CpoI CGGWCCG 1 cut(s) 1409
CseI GACGC 1 cut(s) 424
Csp6I GTAC 6 cut(s) 121, 327, 455, 461, 578, 1350
CspI CGGWCCG 1 cut(s) 1409
CviQI GTAC 6 cut(s) 121, 327, 455, 461, 578, 1350
DdeI CTNAG 6 cut(s) 17, 388, 966, 1278, 1554, 1625
DpnI GATC 9 cut(s) 156, 238, 513, 780, 798, 1230, 1656, 1800, 1917
DpnII GATC 9 cut(s) 154, 236, 511, 778, 796, 1228, 1654, 1798, 1915
EaeI YGGCCR 1 cut(s) 267
Eam1104I CTCTTC 1 cut(s) 1395
EarI CTCTTC 1 cut(s) 1395
Eco130I CCWWGG 2 cut(s) 492, 1253
Eco24I GRGCYC 1 cut(s) 1971
Eco31I GGTCTC 1 cut(s) 1826
Eco32I GATATC 1 cut(s) 198
Eco47I GGWCC 2 cut(s) 1409, 1720
Eco57I CTGAAG 2 cut(s) 404, 1281
EcoRII CCWGG 2 cut(s) 1606, 1927
EcoRV GATATC 1 cut(s) 198
EcoT14I CCWWGG 2 cut(s) 492, 1253
EcoT22I ATGCAT 1 cut(s) 228
EcoT38I GRGCYC 1 cut(s) 1971
ErhI CCWWGG 2 cut(s) 492, 1253
FalI AAGNNNNNCTT 2 cut(s) 1852, 1884
FaqI GGGAC 3 cut(s) 19, 1667, 1884
FauI CCCGC 2 cut(s) 235, 2045
FauNDI CATATG 2 cut(s) 652, 1935
FblI GTMKAC 2 cut(s) 740, 884
Fnu4HI GCNGC 5 cut(s) 43, 1041, 1210, 1240, 1702
FokI GGATG 2 cut(s) 128, 1281
FriOI GRGCYC 1 cut(s) 1971
Fsp4HI GCNGC 5 cut(s) 43, 1041, 1210, 1240, 1702
FspBI CTAG 3 cut(s) 894, 1116, 1323
FspI TGCGCA 1 cut(s) 365
GlaI GCGC 2 cut(s) 365, 1466
GluI GCNGC 5 cut(s) 43, 1041, 1210, 1240, 1702
GsaI CCCAGC 2 cut(s) 112, 346
GsuI CTGGAG 2 cut(s) 879, 1874
HaeIII GGCC 3 cut(s) 269, 1601, 1713
HapII CCGG 2 cut(s) 842, 1581
HgaI GACGC 1 cut(s) 424
HhaI GCGC 2 cut(s) 366, 1467
Hin1I GRCGYC 1 cut(s) 435
Hin6I GCGC 2 cut(s) 364, 1465
HinP1I GCGC 2 cut(s) 364, 1465
HincII GTYRAC 3 cut(s) 741, 1510, 2010
HindII GTYRAC 3 cut(s) 741, 1510, 2010
HindIII AAGCTT 1 cut(s) 1293
HinfI GANTC 5 cut(s) 380, 543, 656, 1001, 1648
HpaI GTTAAC 1 cut(s) 2010
HpaII CCGG 2 cut(s) 842, 1581
HphI GGTGA 4 cut(s) 119, 194, 326, 833
Hpy166II GTNNAC 5 cut(s) 741, 885, 1424, 1510, 2010
Hpy8I GTNNAC 5 cut(s) 741, 885, 1424, 1510, 2010
HpyAV CCTTC 4 cut(s) 224, 591, 1590, 2014
HpyCH4IV ACGT 1 cut(s) 695
HpyF10VI GCNNNNNNNGC 8 cut(s) 524, 757, 1037, 1301, 1457, 1462, 1598, 1710
HpyF3I CTNAG 6 cut(s) 17, 388, 966, 1278, 1554, 1625
HpySE526I ACGT 1 cut(s) 695
Hsp92I GRCGYC 1 cut(s) 435
HspAI GCGC 2 cut(s) 364, 1465
KspAI GTTAAC 1 cut(s) 2010
Kzo9I GATC 9 cut(s) 154, 236, 511, 778, 796, 1228, 1654, 1798, 1915
LmnI GCTCC 5 cut(s) 354, 494, 613, 748, 1437
Lsp1109I GCAGC 5 cut(s) 54, 1052, 1221, 1251, 1713
LweI GCATC 3 cut(s) 94, 1264, 1938
MaeI CTAG 3 cut(s) 894, 1116, 1323
MaeII ACGT 1 cut(s) 695
MaeIII GTNAC 3 cut(s) 125, 276, 621
MalI GATC 9 cut(s) 156, 238, 513, 780, 798, 1230, 1656, 1800, 1917
MbiI CCGCTC 1 cut(s) 2040
MboI GATC 9 cut(s) 154, 236, 511, 778, 796, 1228, 1654, 1798, 1915
MfeI CAATTG 2 cut(s) 252, 1388
MflI RGATCY 6 cut(s) 236, 511, 778, 796, 1228, 1915
MhlI GDGCHC 3 cut(s) 351, 1971, 2059
MlyI GAGTC 2 cut(s) 374, 665
MmeI TCCRAC 4 cut(s) 609, 791, 1287, 1983
Mph1103I ATGCAT 1 cut(s) 228
MroXI GAANNNNTTC 1 cut(s) 1094
MseI TTAA 9 cut(s) 204, 590, 638, 675, 810, 1245, 1341, 1748, 2009
MslI CAYNNNNRTG 7 cut(s) 231, 894, 896, 1083, 1490, 1907, 1946
MspA1I CMGCKG 1 cut(s) 1031
MspI CCGG 2 cut(s) 842, 1581
MspR9I CCNGG 2 cut(s) 1608, 1929
MunI CAATTG 2 cut(s) 252, 1388
Mva1269I GAATGC 1 cut(s) 600
MvaI CCWGG 2 cut(s) 1608, 1929
MvnI CGCG 1 cut(s) 1465
MwoI GCNNNNNNNGC 8 cut(s) 524, 757, 1037, 1301, 1457, 1462, 1598, 1710
NcoI CCATGG 1 cut(s) 1253
NdeI CATATG 2 cut(s) 652, 1935
NdeII GATC 9 cut(s) 154, 236, 511, 778, 796, 1228, 1654, 1798, 1915
NlaIV GGNNCC 6 cut(s) 490, 1439, 1585, 1693, 1809, 1846
NmuCI GTSAC 3 cut(s) 125, 276, 621
NsbI TGCGCA 1 cut(s) 365
NsiI ATGCAT 1 cut(s) 228
NspI RCATGY 2 cut(s) 226, 1206
OliI CACNNNNGTG 3 cut(s) 894, 896, 1083
PaeI GCATGC 1 cut(s) 226
PaqCI CACCTGC 1 cut(s) 809
PasI CCCWGGG 1 cut(s) 1928
PciI ACATGT 1 cut(s) 1202
PctI GAATGC 1 cut(s) 600
PdmI GAANNNNTTC 1 cut(s) 1094
PfeI GAWTC 3 cut(s) 543, 1001, 1648
PflMI CCANNNNNTGG 1 cut(s) 788
PkrI GCNGC 5 cut(s) 44, 1042, 1211, 1241, 1703
PleI GAGTC 2 cut(s) 374, 664
PpsI GAGTC 2 cut(s) 374, 664
PscI ACATGT 1 cut(s) 1202
PsiI TTATAA 1 cut(s) 981
Psp6I CCWGG 2 cut(s) 1606, 1927
PspFI CCCAGC 2 cut(s) 108, 342
PspGI CCWGG 2 cut(s) 1606, 1927
PspN4I GGNNCC 6 cut(s) 490, 1439, 1585, 1693, 1809, 1846
PspPI GGNCC 3 cut(s) 1409, 1599, 1720
PstI CTGCAG 1 cut(s) 44
PsuI RGATCY 6 cut(s) 236, 511, 778, 796, 1228, 1915
RsaI GTAC 6 cut(s) 122, 328, 456, 462, 579, 1351
RsaNI GTAC 6 cut(s) 121, 327, 455, 461, 578, 1350
RseI CAYNNNNRTG 7 cut(s) 231, 894, 896, 1083, 1490, 1907, 1946
Rsr2I CGGWCCG 1 cut(s) 1409
RsrII CGGWCCG 1 cut(s) 1409
SalI GTCGAC 1 cut(s) 739
SaqAI TTAA 9 cut(s) 204, 590, 638, 675, 810, 1245, 1341, 1748, 2009
SatI GCNGC 5 cut(s) 43, 1041, 1210, 1240, 1702
Sau3AI GATC 9 cut(s) 154, 236, 511, 778, 796, 1228, 1654, 1798, 1915
Sau96I GGNCC 3 cut(s) 1409, 1599, 1720
SchI GAGTC 2 cut(s) 374, 665
ScrFI CCNGG 2 cut(s) 1608, 1929
SduI GDGCHC 3 cut(s) 351, 1971, 2059
SfaNI GCATC 3 cut(s) 94, 1264, 1938
SfcI CTRYAG 1 cut(s) 40
SinI GGWCC 2 cut(s) 1409, 1720
SmiMI CAYNNNNRTG 7 cut(s) 231, 894, 896, 1083, 1490, 1907, 1946
SmlI CTYRAG 1 cut(s) 80
SmoI CTYRAG 1 cut(s) 80
SpeI ACTAGT 2 cut(s) 893, 1115
SphI GCATGC 1 cut(s) 226
SsiI CCGC 4 cut(s) 242, 1029, 1407, 2038
SspMI CTAG 3 cut(s) 894, 1116, 1323
StyD4I CCNGG 2 cut(s) 1606, 1927
StyI CCWWGG 2 cut(s) 492, 1253
TaiI ACGT 1 cut(s) 698
TaqI TCGA 4 cut(s) 354, 740, 1672, 1920
TaqII GACCGA 2 cut(s) 107, 1737
TatI WGTACW 3 cut(s) 326, 460, 1349
TfiI GAWTC 3 cut(s) 543, 1001, 1648
Tru1I TTAA 9 cut(s) 204, 590, 638, 675, 810, 1245, 1341, 1748, 2009
Tru9I TTAA 9 cut(s) 204, 590, 638, 675, 810, 1245, 1341, 1748, 2009
TscAI CASTG 6 cut(s) 270, 687, 862, 1090, 1507, 2019
TseFI GTSAC 3 cut(s) 125, 276, 621
TseI GCWGC 5 cut(s) 42, 1040, 1209, 1239, 1701
Tsp45I GTSAC 3 cut(s) 125, 276, 621
TspGWI ACGGA 2 cut(s) 736, 1281
TspRI CASTG 6 cut(s) 270, 687, 862, 1090, 1507, 2019
Van91I CCANNNNNTGG 1 cut(s) 788
VpaK11BI GGWCC 2 cut(s) 1409, 1720
XapI RAATTY 3 cut(s) 1058, 1103, 1394
XceI RCATGY 2 cut(s) 226, 1206
XmiI GTMKAC 2 cut(s) 740, 884
XmnI GAANNNNTTC 1 cut(s) 1094
XspI CTAG 3 cut(s) 894, 1116, 1323
Zsp2I ATGCAT 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.