Prupe.6G284000_v2.0.a1

Abscisic acid receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0014994
Physical Location & Seq
Forward (+)
26397227 .. 26397928
702 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G284000.1

Sequence Viewer

Length: 660 bp
ATGCCTCCCAACCCGCCCAAATCCTCGGTCTTACTCCACCGCATCAACACCCCAACGTCCGCCGAGTCCAATACGGCGTCGCTGCAGTGCCAAAACCAAAGGGGCGGAGGAGCGCTTCTACTCGGTAACAATAATAACAATAACAAGAGGCGGGCCCCACTCCCGGAAGCGCTGGAGCGCCACCACACGCACGCGGTTGGGCCTGACCAGTGCTGCTCGGCCGTGACGCAGGAGATCGCGGCCCCGGTGTCCACCGTGTGGTCGGTGGTCCGGCGCTTCGACAACCCGCAGGCCTACAAGAACTTCGTCAAGAGCTGCCACGTCATCGTCGGCGACGGCGATGTGGGCACTCTGCGCGAGGTGCGGGTGATATCGGGGCTGCCGGCGAACAGTAGCACGGAGAGGCTGGAGATCCTGGACGATGAGAGCCACGTCATAAGCTTCAGCATGGTGGGTGGGGACCACCGGCTCTCGAACTACAAGTCGGTGACGACGCTGCACCCGTCACCCTCAGGCGGGACGGTGGTGGTGGAGTCGTACGTGGTGGACGTGCCGCACGGGAACAGCAAGGAGGACACGTGGACGTTCGTGGACACGATTGTTCGCTGCAACCTCCAGTCACTGGCTCACATCGCCGAGAATTTAGACCGACGCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
Polyketide_cyc2

Protein Analysis

220

Amino Acids

23.85

Weight (kDa)

6.79

Isoelectric Point (pI)

45.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014994)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G38310
fragaria_vesca FvH4_6g10740
malus_domestica MD04G1165000.v1.1 MD12G1178800.v1.1
prunus_persica Prupe.6G284000_v2.0.a1
pyrus_communis pycom04g14710 pycom12g16880
rosa_chinensis RchiOBHm_Chr3g0461781
rosa_laevigata RLG00000024899
rosa_multiflora Rmu_sc0004308.1_g000008
rosa_roxburghii Rroxscaffold_6G00417950
rosa_rugosa Rorug03G0053500
rosa_samantha Rh3BG114800 Rh3CG117100 Rh3DG116600
rosa_wichuraiana Rw3G009460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 258, 622
AccII CGCG 3 cut(s) 194, 239, 357
AclWI GGATC 1 cut(s) 406
AcoI YGGCCR 1 cut(s) 219
AcsI RAATTY 1 cut(s) 640
AcuI CTGAAG 1 cut(s) 427
AcvI CACGTG 1 cut(s) 579
AcyI GRCGYC 1 cut(s) 77
AdeI CACNNNGTG 1 cut(s) 258
AfaI GTAC 1 cut(s) 539
AfeI AGCGCT 2 cut(s) 114, 171
AfiI CCNNNNNNNGG 5 cut(s) 163, 258, 515, 516, 622
AflIII ACRYGT 1 cut(s) 576
AjiI CACGTC 3 cut(s) 322, 433, 550
AjnI CCWGG 1 cut(s) 414
AluBI AGCT 2 cut(s) 315, 441
AluI AGCT 2 cut(s) 315, 441
AlwI GGATC 1 cut(s) 406
AlwNI CAGNNNCTG 1 cut(s) 622
Aor51HI AGCGCT 2 cut(s) 114, 171
AoxI GGCC 5 cut(s) 153, 200, 219, 240, 291
ApaI GGGCCC 1 cut(s) 157
ApeKI GCWGC 6 cut(s) 82, 213, 315, 379, 496, 606
ApoI RAATTY 1 cut(s) 640
ArsI GACNNNNNNTTYG 4 cut(s) 12, 44, 467, 499
AspLEI GCGC 5 cut(s) 115, 172, 180, 276, 357
AspS9I GGNCC 6 cut(s) 153, 154, 200, 241, 268, 460
AsuC2I CCSGG 2 cut(s) 164, 245
AsuHPI GGTGA 3 cut(s) 379, 498, 499
AvaII GGWCC 2 cut(s) 268, 460
AxyI CCTNAGG 1 cut(s) 511
BaeGI GKGCMC 2 cut(s) 157, 350
BanII GRGCYC 1 cut(s) 157
BbrPI CACGTG 1 cut(s) 579
BbvI GCAGC 6 cut(s) 69, 200, 302, 366, 483, 593
BceAI ACGGC 3 cut(s) 90, 206, 352
BciT130I CCWGG 1 cut(s) 416
BcnI CCSGG 2 cut(s) 164, 245
BfmI CTRYAG 1 cut(s) 83
BfoI RGCGCY 4 cut(s) 116, 173, 181, 277
BisI GCNGC 8 cut(s) 83, 214, 240, 316, 380, 497, 554, 607
BlsI GCNGC 8 cut(s) 84, 215, 241, 317, 381, 498, 555, 608
Bme1390I CCNGG 3 cut(s) 164, 245, 416
Bme18I GGWCC 2 cut(s) 268, 460
BmgBI CACGTC 3 cut(s) 322, 433, 550
BmgT120I GGNCC 6 cut(s) 153, 154, 200, 241, 268, 460
BmiI GGNNCC 4 cut(s) 155, 156, 243, 461
BmrFI CCNGG 3 cut(s) 164, 245, 416
BmsI GCATC 1 cut(s) 51
BpmI CTGGAG 3 cut(s) 194, 428, 599
BpuMI CCSGG 2 cut(s) 164, 245
BsaAI YACGTR 2 cut(s) 541, 579
BsaHI GRCGYC 1 cut(s) 77
BsaJI CCNNGG 2 cut(s) 24, 243
BsaXI ACNNNNNCTCC 2 cut(s) 563, 593
Bsc4I CCNNNNNNNGG 5 cut(s) 163, 258, 515, 516, 622
Bse118I RCCGGY 2 cut(s) 382, 465
Bse1I ACTGG 3 cut(s) 208, 616, 627
Bse21I CCTNAGG 1 cut(s) 511
BseBI CCWGG 1 cut(s) 416
BseDI CCNNGG 2 cut(s) 24, 243
BseLI CCNNNNNNNGG 5 cut(s) 163, 258, 515, 516, 622
BseMII CTCAG 1 cut(s) 525
BseNI ACTGG 3 cut(s) 208, 616, 627
BseRI GAGGAG 1 cut(s) 123
BseSI GKGCMC 2 cut(s) 157, 350
BseX3I CGGCCG 1 cut(s) 219
BseXI GCAGC 6 cut(s) 69, 200, 302, 366, 483, 593
BsgI GTGCAG 1 cut(s) 482
Bsh1236I CGCG 3 cut(s) 194, 239, 357
Bsh1285I CGRYCG 1 cut(s) 222
BshFI GGCC 5 cut(s) 155, 202, 221, 242, 293
BsiEI CGRYCG 1 cut(s) 222
BsiSI CCGG 5 cut(s) 164, 245, 271, 383, 466
BsiWI CGTACG 1 cut(s) 537
BslFI GGGAC 2 cut(s) 473, 532
BslI CCNNNNNNNGG 5 cut(s) 163, 258, 515, 516, 622
BsmFI GGGAC 2 cut(s) 473, 532
BsnI GGCC 5 cut(s) 155, 202, 221, 242, 293
Bsp120I GGGCCC 1 cut(s) 153
Bsp1286I GDGCHC 2 cut(s) 157, 350
Bsp143I GATC 2 cut(s) 234, 411
BspANI GGCC 5 cut(s) 155, 202, 221, 242, 293
BspCNI CTCAG 1 cut(s) 524
BspFNI CGCG 3 cut(s) 194, 239, 357
BspLI GGNNCC 4 cut(s) 155, 156, 243, 461
BspMAI CTGCAG 1 cut(s) 87
BspPI GGATC 1 cut(s) 406
BsrFI RCCGGY 2 cut(s) 382, 465
BsrI ACTGG 3 cut(s) 208, 616, 627
BssAI RCCGGY 2 cut(s) 382, 465
BssECI CCNNGG 2 cut(s) 24, 243
BssMI GATC 2 cut(s) 234, 411
BssNI GRCGYC 1 cut(s) 77
Bst2UI CCWGG 1 cut(s) 416
Bst4CI ACNGT 3 cut(s) 256, 392, 523
BstACI GRCGYC 1 cut(s) 77
BstBAI YACGTR 2 cut(s) 541, 579
BstC8I GCNNGC 4 cut(s) 153, 192, 291, 384
BstDEI CTNAG 1 cut(s) 511
BstFNI CGCG 3 cut(s) 194, 239, 357
BstH2I RGCGCY 4 cut(s) 116, 173, 181, 277
BstHHI GCGC 5 cut(s) 115, 172, 180, 276, 357
BstKTI GATC 2 cut(s) 237, 414
BstMBI GATC 2 cut(s) 234, 411
BstMCI CGRYCG 1 cut(s) 222
BstMWI GCNNNNNNNGC 4 cut(s) 345, 354, 361, 632
BstNI CCWGG 1 cut(s) 416
BstSCI CCNGG 3 cut(s) 162, 243, 414
BstSFI CTRYAG 1 cut(s) 83
BstSLI GKGCMC 2 cut(s) 157, 350
BstUI CGCG 3 cut(s) 194, 239, 357
BstV1I GCAGC 6 cut(s) 69, 200, 302, 366, 483, 593
BstX2I RGATCY 1 cut(s) 411
BstYI RGATCY 1 cut(s) 411
BstZI CGGCCG 1 cut(s) 219
Bsu36I CCTNAGG 1 cut(s) 511
BsuRI GGCC 5 cut(s) 155, 202, 221, 242, 293
BtgZI GCGATG 2 cut(s) 354, 616
BtrI CACGTC 3 cut(s) 322, 433, 550
BtsI GCAGTG 1 cut(s) 92
BtsIMutI CAGTG 3 cut(s) 92, 215, 620
Cac8I GCNNGC 4 cut(s) 153, 192, 291, 384
CaiI CAGNNNCTG 1 cut(s) 622
CfoI GCGC 5 cut(s) 115, 172, 180, 276, 357
Cfr10I RCCGGY 2 cut(s) 382, 465
Cfr13I GGNCC 6 cut(s) 153, 154, 200, 241, 268, 460
CseI GACGC 3 cut(s) 66, 235, 502
Csp6I GTAC 1 cut(s) 538
CviAII CATG 1 cut(s) 448
CviQI GTAC 1 cut(s) 538
DdeI CTNAG 1 cut(s) 511
DpnI GATC 2 cut(s) 236, 413
DpnII GATC 2 cut(s) 234, 411
DraIII CACNNNGTG 1 cut(s) 258
EaeI YGGCCR 1 cut(s) 219
EagI CGGCCG 1 cut(s) 219
EciI GGCGGA 2 cut(s) 49, 120
EclXI CGGCCG 1 cut(s) 219
Eco147I AGGCCT 1 cut(s) 293
Eco24I GRGCYC 1 cut(s) 157
Eco32I GATATC 1 cut(s) 372
Eco47I GGWCC 2 cut(s) 268, 460
Eco47III AGCGCT 2 cut(s) 114, 171
Eco52I CGGCCG 1 cut(s) 219
Eco57I CTGAAG 1 cut(s) 427
Eco72I CACGTG 1 cut(s) 579
Eco81I CCTNAGG 1 cut(s) 511
EcoO109I RGGNCCY 1 cut(s) 154
EcoRII CCWGG 1 cut(s) 414
EcoRV GATATC 1 cut(s) 372
EcoT38I GRGCYC 1 cut(s) 157
FaeI CATG 1 cut(s) 451
FaiI YATR 2 cut(s) 437, 449
FaqI GGGAC 2 cut(s) 473, 532
FatI CATG 1 cut(s) 447
FauI CCCGC 5 cut(s) 21, 144, 294, 357, 509
Fnu4HI GCNGC 8 cut(s) 83, 214, 240, 316, 380, 497, 554, 607
FriOI GRGCYC 1 cut(s) 157
Fsp4HI GCNGC 8 cut(s) 83, 214, 240, 316, 380, 497, 554, 607
GlaI GCGC 5 cut(s) 114, 171, 179, 275, 356
GluI GCNGC 8 cut(s) 83, 214, 240, 316, 380, 497, 554, 607
GsuI CTGGAG 3 cut(s) 194, 428, 599
HaeII RGCGCY 4 cut(s) 116, 173, 181, 277
HaeIII GGCC 5 cut(s) 155, 202, 221, 242, 293
HapII CCGG 5 cut(s) 164, 245, 271, 383, 466
HgaI GACGC 3 cut(s) 66, 235, 502
HhaI GCGC 5 cut(s) 115, 172, 180, 276, 357
Hin1I GRCGYC 1 cut(s) 77
Hin1II CATG 1 cut(s) 451
Hin6I GCGC 5 cut(s) 113, 170, 178, 274, 355
HinP1I GCGC 5 cut(s) 113, 170, 178, 274, 355
HindIII AAGCTT 1 cut(s) 439
HinfI GANTC 2 cut(s) 65, 533
HpaII CCGG 5 cut(s) 164, 245, 271, 383, 466
HphI GGTGA 3 cut(s) 379, 498, 499
Hpy166II GTNNAC 4 cut(s) 252, 547, 582, 592
Hpy188III TCNNGA 2 cut(s) 310, 472
Hpy8I GTNNAC 4 cut(s) 252, 547, 582, 592
Hpy99I CGWCG 5 cut(s) 82, 332, 338, 496, 654
HpyCH4III ACNGT 3 cut(s) 256, 392, 523
HpyCH4IV ACGT 7 cut(s) 56, 321, 432, 540, 549, 578, 584
HpyCH4V TGCA 3 cut(s) 85, 499, 609
HpyF10VI GCNNNNNNNGC 4 cut(s) 345, 354, 361, 632
HpyF3I CTNAG 1 cut(s) 511
HpySE526I ACGT 7 cut(s) 56, 321, 432, 540, 549, 578, 584
Hsp92I GRCGYC 1 cut(s) 77
Hsp92II CATG 1 cut(s) 451
HspAI GCGC 5 cut(s) 113, 170, 178, 274, 355
KroI GCCGGC 1 cut(s) 382
KroNI GCCGGC 1 cut(s) 384
Kzo9I GATC 2 cut(s) 234, 411
LmnI GCTCC 2 cut(s) 110, 175
Lsp1109I GCAGC 6 cut(s) 69, 200, 302, 366, 483, 593
LweI GCATC 1 cut(s) 51
MaeII ACGT 7 cut(s) 56, 321, 432, 540, 549, 578, 584
MaeIII GTNAC 5 cut(s) 125, 223, 487, 504, 618
MalI GATC 2 cut(s) 236, 413
MboI GATC 2 cut(s) 234, 411
MflI RGATCY 1 cut(s) 411
MhlI GDGCHC 2 cut(s) 157, 350
MluCI AATT 1 cut(s) 640
MlyI GAGTC 2 cut(s) 74, 542
MnlI CCTC 9 cut(s) 15, 34, 101, 141, 352, 396, 520, 565, 623
MroNI GCCGGC 1 cut(s) 382
MspI CCGG 5 cut(s) 164, 245, 271, 383, 466
MspR9I CCNGG 3 cut(s) 164, 245, 416
MvaI CCWGG 1 cut(s) 416
MvnI CGCG 3 cut(s) 194, 239, 357
MwoI GCNNNNNNNGC 4 cut(s) 345, 354, 361, 632
NaeI GCCGGC 1 cut(s) 384
NciI CCSGG 2 cut(s) 164, 245
NdeII GATC 2 cut(s) 234, 411
NgoMIV GCCGGC 1 cut(s) 382
NlaIII CATG 1 cut(s) 451
NlaIV GGNNCC 4 cut(s) 155, 156, 243, 461
NmeAIII GCCGAG 2 cut(s) 88, 197
NmuCI GTSAC 4 cut(s) 223, 487, 504, 618
PceI AGGCCT 1 cut(s) 293
PcsI WCGNNNNNNNCGW 3 cut(s) 336, 500, 546
PdiI GCCGGC 1 cut(s) 384
Pfl23II CGTACG 1 cut(s) 537
PflMI CCANNNNNTGG 2 cut(s) 258, 622
PfoI TCCNGGA 2 cut(s) 162, 414
PkrI GCNGC 8 cut(s) 84, 215, 241, 317, 381, 498, 555, 608
PleI GAGTC 2 cut(s) 73, 541
PmaCI CACGTG 1 cut(s) 579
PmlI CACGTG 1 cut(s) 579
PpsI GAGTC 2 cut(s) 73, 541
Ppu21I YACGTR 2 cut(s) 541, 579
Psp6I CCWGG 1 cut(s) 414
PspCI CACGTG 1 cut(s) 579
PspGI CCWGG 1 cut(s) 414
PspLI CGTACG 1 cut(s) 537
PspN4I GGNNCC 4 cut(s) 155, 156, 243, 461
PspOMI GGGCCC 1 cut(s) 153
PspPI GGNCC 6 cut(s) 153, 154, 200, 241, 268, 460
PstI CTGCAG 1 cut(s) 87
PstNI CAGNNNCTG 1 cut(s) 622
PsuI RGATCY 1 cut(s) 411
RsaI GTAC 1 cut(s) 539
RsaNI GTAC 1 cut(s) 538
SatI GCNGC 8 cut(s) 83, 214, 240, 316, 380, 497, 554, 607
Sau3AI GATC 2 cut(s) 234, 411
Sau96I GGNCC 6 cut(s) 153, 154, 200, 241, 268, 460
SchI GAGTC 2 cut(s) 74, 542
ScrFI CCNGG 3 cut(s) 164, 245, 416
SduI GDGCHC 2 cut(s) 157, 350
SfaNI GCATC 1 cut(s) 51
SfcI CTRYAG 1 cut(s) 83
SinI GGWCC 2 cut(s) 268, 460
Sse9I AATT 1 cut(s) 640
SseBI AGGCCT 1 cut(s) 293
StuI AGGCCT 1 cut(s) 293
StyD4I CCNGG 3 cut(s) 162, 243, 414
TaaI ACNGT 3 cut(s) 256, 392, 523
TaiI ACGT 7 cut(s) 59, 324, 435, 543, 552, 581, 587
TaqI TCGA 2 cut(s) 279, 473
TaqII GACCGA 1 cut(s) 16
TasI AATT 1 cut(s) 640
TauI GCSGC 2 cut(s) 242, 556
TscAI CASTG 3 cut(s) 92, 215, 627
TseFI GTSAC 4 cut(s) 223, 487, 504, 618
TseI GCWGC 6 cut(s) 82, 213, 315, 379, 496, 606
Tsp45I GTSAC 4 cut(s) 223, 487, 504, 618
TspGWI ACGGA 1 cut(s) 413
TspRI CASTG 3 cut(s) 92, 215, 627
Van91I CCANNNNNTGG 2 cut(s) 258, 622
VpaK11BI GGWCC 2 cut(s) 268, 460
XapI RAATTY 1 cut(s) 640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.