Prupe.6G295800_v2.0.a1

Belongs to the glycosyl hydrolase 5 (cellulase A) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
27066377 .. 27068502
2126 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G295800.1

Sequence Viewer

Length: 1410 bp
ATGGATACCCACAAAAGAAACTTGATGTCACAGAGCATTCTTATGGTGACCATTTTTATGATTTTCATCAACCATTCAAGTTCTACTTTCCATGGTTCTGGTGGAGTGGAGCAACTGGACACCGTGGTGGAGGAAGCCGAAGATCATTTAGCATATCCAAGCACAAGTGATTGGATTGAAGAGTTGAATGATGGCATGGAAGATGATGAGTGGCAATTGGTGCAGAAGAAAGGGAACCAATTTGTAGTGAACGATCAACCTTTCTATGTTAATGGATTCAACACTTATTGGTTGATGGTATTTGCTGCTGATAAATCCACAAGAGGAAAGGTCACTGATACATTCAAACAGGCATCTTCAGTGGGTCTAACTGTTTGTAGGACTTGGGCTTTCAACGACGGCCAGTGGCGAGCTCTTCAGAAATCTCCATCAGTTTATGATGAAGAAGTTTTCAAGGGTTTGGATTTTGTGATAAGTGAAGCAAGGAAGTGCAAGATCAGGCTCATATTGTCTTTAACCAACAACTGGGATGCATATGGTGGAAAATCACAATATGTCAAATGGGGAAAAGCAGCTGGTCTGAATTTGACTTCAGATGATGACTTCTTCTCTCATCCAACACTCAAAAGCTACTACAAGGCCCATGTTAAGACGGTTCTTAACAGAGTTAACACACTCACAAACATTACTTACAAGGACGATCCCACAGTTTTTGCTTGGGAACTGATGAACGAGCCTCGATGCACCTCAGATCCTTCGGGTGATAAACTGCAGGATTGGATACAAGAAATGGCTGTTTATGTCAAGAGACTCGATCCAAAGCACTTGGTGGAGATTGGATTGGAAGGATTTTATGGTCCCTCATCACCTGGCAGAGTTCAGTTCAATCCAAACACATATGCTCAACAAGTTGGAACTGATTTCATAAGGAACCACCAGGTTTTGGGTGTTGATTTCGCTTCTGTTCACATCTATGCAGACTCTTGGATTTCAAAATCAATCTCTGATTTGCATCTCCAATTTACCAAGTCATGGATGGAAGCCCACATTGAGGATGCAGAGAAAAATCTTGGGATGCCGGTTGTGTTTTCGGAGTTTGGTGTGTCTTCGAAAGACCCGGGCTACAATTCATCGTTTAGGGACACCCTTCTCAGCACAGTGTACAAGACCATCCTCAACTCTACTAAGAAAGGAGGGAGCGGAGGTGGCAGTCTTTTGTGGCAGCTCTTCCCTGAAGGAACTGAGTACATGGATGACGGGTACGCAATCATTCTTTCGAAATCTCCCTCAACATCAAACATCATAGCCCTTCACTCCACAAGACTTGCCCTCTTCAACTCTAGATGTTCTTGGAAAAGCCATTGGGGCTGCAAGAAGAAGAATCCACTAGAGACATTCCCATTATACTAG

Protein Analysis

470

Amino Acids

53.11

Weight (kDa)

5.83

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 525, 943, 1032
AccBSI CCGCTC 1 cut(s) 1200
AciI CCGC 1 cut(s) 1200
AclWI GGATC 3 cut(s) 695, 746, 809
AcoI YGGCCR 1 cut(s) 400
AcsI RAATTY 1 cut(s) 583
AcuI CTGAAG 4 cut(s) 342, 401, 576, 1254
AdeI CACNNNGTG 1 cut(s) 829
AfaI GTAC 3 cut(s) 1163, 1247, 1262
AfiI CCNNNNNNNGG 4 cut(s) 525, 943, 1032, 1051
AjnI CCWGG 2 cut(s) 868, 936
AleI CACNNNNGTG 1 cut(s) 125
AluBI AGCT 4 cut(s) 413, 575, 630, 1225
AluI AGCT 4 cut(s) 413, 575, 630, 1225
Alw21I GWGCWC 1 cut(s) 415
Alw26I GTCTC 2 cut(s) 802, 1385
AlwI GGATC 3 cut(s) 695, 746, 809
Ama87I CYCGRG 1 cut(s) 1117
AoxI GGCC 2 cut(s) 400, 639
ApeKI GCWGC 4 cut(s) 305, 572, 1222, 1368
ApoI RAATTY 1 cut(s) 583
AspS9I GGNCC 2 cut(s) 640, 857
AsuC2I CCSGG 2 cut(s) 1118, 1119
AsuHPI GGTGA 3 cut(s) 58, 773, 858
AsuII TTCGAA 2 cut(s) 1109, 1277
AvaI CYCGRG 1 cut(s) 1117
AvaII GGWCC 1 cut(s) 857
BanII GRGCYC 1 cut(s) 415
BbsI GAAGAC 1 cut(s) 1098
Bbv12I GWGCWC 1 cut(s) 415
BbvI GCAGC 4 cut(s) 292, 584, 1234, 1355
BccI CCATC 5 cut(s) 185, 289, 436, 1030, 1178
BceAI ACGGC 1 cut(s) 415
BciT130I CCWGG 2 cut(s) 870, 938
BciVI GTATCC 1 cut(s) 774
BcnI CCSGG 2 cut(s) 1118, 1119
BcoDI GTCTC 2 cut(s) 802, 1385
BfaI CTAG 3 cut(s) 1341, 1388, 1408
BfmI CTRYAG 1 cut(s) 770
BfuI GTATCC 1 cut(s) 774
BglI GCCNNNNNGGC 1 cut(s) 1365
BisI GCNGC 4 cut(s) 306, 573, 1223, 1369
BlsI GCNGC 4 cut(s) 307, 574, 1224, 1370
Bme1390I CCNGG 4 cut(s) 870, 938, 1118, 1119
Bme18I GGWCC 1 cut(s) 857
BmeT110I CYCGRG 1 cut(s) 1117
BmgT120I GGNCC 2 cut(s) 640, 857
BmiI GGNNCC 3 cut(s) 236, 859, 932
BmrFI CCNGG 4 cut(s) 870, 938, 1118, 1119
BmrI ACTGGG 1 cut(s) 535
BmsI GCATC 6 cut(s) 362, 520, 731, 1021, 1045, 1065
BmuI ACTGGG 1 cut(s) 535
BpiI GAAGAC 1 cut(s) 1098
Bpu14I TTCGAA 2 cut(s) 1109, 1277
BpuMI CCSGG 2 cut(s) 1118, 1119
BsaBI GATNNNNATC 2 cut(s) 65, 1011
BsaJI CCNNGG 3 cut(s) 91, 123, 1117
BsaXI ACNNNNNCTCC 2 cut(s) 1189, 1219
Bsc4I CCNNNNNNNGG 4 cut(s) 525, 943, 1032, 1051
Bse118I RCCGGY 1 cut(s) 1078
Bse1I ACTGG 3 cut(s) 120, 403, 530
Bse8I GATNNNNATC 2 cut(s) 65, 1011
BseBI CCWGG 2 cut(s) 870, 938
BseDI CCNNGG 3 cut(s) 91, 123, 1117
BseGI GGATG 7 cut(s) 535, 613, 1041, 1060, 1080, 1170, 1258
BseJI GATNNNNATC 2 cut(s) 65, 1011
BseLI CCNNNNNNNGG 4 cut(s) 525, 943, 1032, 1051
BseMII CTCAG 3 cut(s) 762, 1165, 1233
BseNI ACTGG 3 cut(s) 120, 403, 530
BseXI GCAGC 4 cut(s) 292, 584, 1234, 1355
BsgI GTGCAG 1 cut(s) 242
BshFI GGCC 2 cut(s) 402, 641
BsiHKAI GWGCWC 1 cut(s) 415
BsiHKCI CYCGRG 1 cut(s) 1117
BsiSI CCGG 2 cut(s) 1079, 1118
BslFI GGGAC 2 cut(s) 843, 1154
BslI CCNNNNNNNGG 4 cut(s) 525, 943, 1032, 1051
BsmAI GTCTC 2 cut(s) 802, 1385
BsmFI GGGAC 2 cut(s) 843, 1154
BsmI GAATGC 1 cut(s) 36
BsnI GGCC 2 cut(s) 402, 641
BsoBI CYCGRG 1 cut(s) 1117
Bsp119I TTCGAA 2 cut(s) 1109, 1277
Bsp1286I GDGCHC 1 cut(s) 415
Bsp1407I TGTACA 1 cut(s) 1161
Bsp143I GATC 6 cut(s) 142, 253, 495, 700, 751, 814
Bsp19I CCATGG 1 cut(s) 91
BspACI CCGC 1 cut(s) 1200
BspANI GGCC 2 cut(s) 402, 641
BspCNI CTCAG 3 cut(s) 761, 1164, 1234
BspLI GGNNCC 3 cut(s) 236, 859, 932
BspMAI CTGCAG 1 cut(s) 774
BspPI GGATC 3 cut(s) 695, 746, 809
BspQI GCTCTTC 2 cut(s) 420, 1232
BspT104I TTCGAA 2 cut(s) 1109, 1277
BsrBI CCGCTC 1 cut(s) 1200
BsrFI RCCGGY 1 cut(s) 1078
BsrGI TGTACA 1 cut(s) 1161
BsrI ACTGG 3 cut(s) 120, 403, 530
BssAI RCCGGY 1 cut(s) 1078
BssECI CCNNGG 3 cut(s) 91, 123, 1117
BssMI GATC 6 cut(s) 142, 253, 495, 700, 751, 814
BssT1I CCWWGG 1 cut(s) 91
Bst2UI CCWGG 2 cut(s) 870, 938
Bst4CI ACNGT 5 cut(s) 124, 373, 655, 709, 1159
Bst6I CTCTTC 4 cut(s) 174, 420, 1232, 1337
BstAPI GCANNNNNTGC 1 cut(s) 220
BstAUI TGTACA 1 cut(s) 1161
BstBI TTCGAA 2 cut(s) 1109, 1277
BstC8I GCNNGC 1 cut(s) 411
BstDEI CTNAG 4 cut(s) 748, 1151, 1185, 1242
BstDSI CCRYGG 2 cut(s) 91, 123
BstEII GGTNACC 1 cut(s) 46
BstF5I GGATG 7 cut(s) 535, 613, 1041, 1060, 1080, 1170, 1258
BstKTI GATC 6 cut(s) 145, 256, 498, 703, 754, 817
BstMAI GTCTC 2 cut(s) 802, 1385
BstMBI GATC 6 cut(s) 142, 253, 495, 700, 751, 814
BstMWI GCNNNNNNNGC 3 cut(s) 220, 1206, 1365
BstNI CCWGG 2 cut(s) 870, 938
BstPI GGTNACC 1 cut(s) 46
BstSCI CCNGG 4 cut(s) 868, 936, 1116, 1117
BstSFI CTRYAG 1 cut(s) 770
BstV1I GCAGC 4 cut(s) 292, 584, 1234, 1355
BstV2I GAAGAC 1 cut(s) 1098
BstX2I RGATCY 1 cut(s) 751
BstXI CCANNNNNNTGG 1 cut(s) 98
BstYI RGATCY 1 cut(s) 751
BsuI GTATCC 1 cut(s) 774
BsuRI GGCC 2 cut(s) 402, 641
BtgI CCRYGG 2 cut(s) 91, 123
BtsCI GGATG 7 cut(s) 535, 613, 1041, 1060, 1080, 1170, 1258
BtsIMutI CAGTG 4 cut(s) 333, 366, 410, 1164
Cac8I GCNNGC 1 cut(s) 411
Cfr10I RCCGGY 1 cut(s) 1078
Cfr13I GGNCC 2 cut(s) 640, 857
Cfr9I CCCGGG 1 cut(s) 1117
CsiI ACCWGGT 1 cut(s) 936
Csp6I GTAC 3 cut(s) 1162, 1246, 1261
CspCI CAANNNNNGTGG 4 cut(s) 694, 729, 1306, 1341
CviAII CATG 5 cut(s) 92, 196, 644, 1032, 1249
CviQI GTAC 3 cut(s) 1162, 1246, 1261
DdeI CTNAG 4 cut(s) 748, 1151, 1185, 1242
DpnI GATC 6 cut(s) 144, 255, 497, 702, 753, 816
DpnII GATC 6 cut(s) 142, 253, 495, 700, 751, 814
DraIII CACNNNGTG 1 cut(s) 829
EaeI YGGCCR 1 cut(s) 400
Eam1104I CTCTTC 4 cut(s) 174, 420, 1232, 1337
EarI CTCTTC 4 cut(s) 174, 420, 1232, 1337
Ecl136II GAGCTC 1 cut(s) 413
Eco130I CCWWGG 1 cut(s) 91
Eco24I GRGCYC 1 cut(s) 415
Eco47I GGWCC 1 cut(s) 857
Eco53kI GAGCTC 1 cut(s) 413
Eco57I CTGAAG 4 cut(s) 342, 401, 576, 1254
Eco88I CYCGRG 1 cut(s) 1117
Eco91I GGTNACC 1 cut(s) 46
EcoICRI GAGCTC 1 cut(s) 413
EcoO65I GGTNACC 1 cut(s) 46
EcoRII CCWGG 2 cut(s) 868, 936
EcoT14I CCWWGG 1 cut(s) 91
EcoT22I ATGCAT 1 cut(s) 535
EcoT38I GRGCYC 1 cut(s) 415
ErhI CCWWGG 1 cut(s) 91
FaeI CATG 5 cut(s) 95, 199, 647, 1035, 1252
FalI AAGNNNNNCTT 2 cut(s) 70, 102
FaqI GGGAC 2 cut(s) 843, 1154
FatI CATG 5 cut(s) 91, 195, 643, 1031, 1248
FauNDI CATATG 2 cut(s) 535, 898
Fnu4HI GCNGC 4 cut(s) 306, 573, 1223, 1369
FokI GGATG 7 cut(s) 542, 600, 1048, 1067, 1087, 1157, 1265
FriOI GRGCYC 1 cut(s) 415
Fsp4HI GCNGC 4 cut(s) 306, 573, 1223, 1369
FspBI CTAG 3 cut(s) 1341, 1388, 1408
GluI GCNGC 4 cut(s) 306, 573, 1223, 1369
HaeIII GGCC 2 cut(s) 402, 641
HapII CCGG 2 cut(s) 1079, 1118
Hin1II CATG 5 cut(s) 95, 199, 647, 1035, 1252
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HinfI GANTC 4 cut(s) 276, 810, 980, 1381
HpaI GTTAAC 1 cut(s) 670
HpaII CCGG 2 cut(s) 1079, 1118
HphI GGTGA 3 cut(s) 58, 773, 858
Hpy166II GTNNAC 4 cut(s) 250, 670, 967, 1162
Hpy188I TCNGA 6 cut(s) 420, 582, 595, 751, 1006, 1093
Hpy188III TCNNGA 2 cut(s) 805, 1341
Hpy8I GTNNAC 4 cut(s) 250, 670, 967, 1162
Hpy99I CGWCG 1 cut(s) 401
HpyAV CCTTC 5 cut(s) 765, 839, 1157, 1229, 1319
HpyCH4III ACNGT 5 cut(s) 124, 373, 655, 709, 1159
HpyCH4V TGCA 9 cut(s) 223, 492, 533, 744, 772, 977, 1012, 1058, 1371
HpyF10VI GCNNNNNNNGC 3 cut(s) 220, 1206, 1365
HpyF3I CTNAG 4 cut(s) 748, 1151, 1185, 1242
Hsp92II CATG 5 cut(s) 95, 199, 647, 1035, 1252
KspAI GTTAAC 1 cut(s) 670
Kzo9I GATC 6 cut(s) 142, 253, 495, 700, 751, 814
LguI GCTCTTC 2 cut(s) 420, 1232
LmnI GCTCC 2 cut(s) 109, 1197
Lsp1109I GCAGC 4 cut(s) 292, 584, 1234, 1355
LweI GCATC 6 cut(s) 362, 520, 731, 1021, 1045, 1065
MabI ACCWGGT 1 cut(s) 936
MaeI CTAG 3 cut(s) 1341, 1388, 1408
MaeIII GTNAC 3 cut(s) 27, 46, 331
MalI GATC 6 cut(s) 144, 255, 497, 702, 753, 816
MbiI CCGCTC 1 cut(s) 1200
MboI GATC 6 cut(s) 142, 253, 495, 700, 751, 814
MfeI CAATTG 1 cut(s) 215
MflI RGATCY 1 cut(s) 751
MhlI GDGCHC 1 cut(s) 415
MluCI AATT 5 cut(s) 215, 239, 583, 1019, 1126
MlyI GAGTC 2 cut(s) 804, 974
MmeI TCCRAC 2 cut(s) 641, 892
Mph1103I ATGCAT 1 cut(s) 535
MseI TTAA 5 cut(s) 270, 515, 648, 660, 669
MslI CAYNNNNRTG 4 cut(s) 41, 56, 125, 972
MspA1I CMGCKG 1 cut(s) 575
MspI CCGG 2 cut(s) 1079, 1118
MspR9I CCNGG 4 cut(s) 870, 938, 1118, 1119
MunI CAATTG 1 cut(s) 215
Mva1269I GAATGC 1 cut(s) 36
MvaI CCWGG 2 cut(s) 870, 938
MwoI GCNNNNNNNGC 3 cut(s) 220, 1206, 1365
NciI CCSGG 2 cut(s) 1118, 1119
NcoI CCATGG 1 cut(s) 91
NdeI CATATG 2 cut(s) 535, 898
NdeII GATC 6 cut(s) 142, 253, 495, 700, 751, 814
NlaIII CATG 5 cut(s) 95, 199, 647, 1035, 1252
NlaIV GGNNCC 3 cut(s) 236, 859, 932
NmuCI GTSAC 3 cut(s) 27, 46, 331
NsiI ATGCAT 1 cut(s) 535
NspV TTCGAA 2 cut(s) 1109, 1277
OliI CACNNNNGTG 1 cut(s) 125
PciSI GCTCTTC 2 cut(s) 420, 1232
PctI GAATGC 1 cut(s) 36
PfeI GAWTC 2 cut(s) 276, 1381
PflMI CCANNNNNTGG 3 cut(s) 525, 943, 1032
PkrI GCNGC 4 cut(s) 307, 574, 1224, 1370
PleI GAGTC 2 cut(s) 804, 974
PpsI GAGTC 2 cut(s) 804, 974
Psp124BI GAGCTC 1 cut(s) 415
Psp6I CCWGG 2 cut(s) 868, 936
PspEI GGTNACC 1 cut(s) 46
PspGI CCWGG 2 cut(s) 868, 936
PspN4I GGNNCC 3 cut(s) 236, 859, 932
PspPI GGNCC 2 cut(s) 640, 857
PstI CTGCAG 1 cut(s) 774
PsuI RGATCY 1 cut(s) 751
PvuII CAGCTG 1 cut(s) 575
RsaI GTAC 3 cut(s) 1163, 1247, 1262
RsaNI GTAC 3 cut(s) 1162, 1246, 1261
RseI CAYNNNNRTG 4 cut(s) 41, 56, 125, 972
SacI GAGCTC 1 cut(s) 415
SapI GCTCTTC 2 cut(s) 420, 1232
SaqAI TTAA 5 cut(s) 270, 515, 648, 660, 669
SatI GCNGC 4 cut(s) 306, 573, 1223, 1369
Sau3AI GATC 6 cut(s) 142, 253, 495, 700, 751, 814
Sau96I GGNCC 2 cut(s) 640, 857
SchI GAGTC 2 cut(s) 804, 974
ScrFI CCNGG 4 cut(s) 870, 938, 1118, 1119
SduI GDGCHC 1 cut(s) 415
SexAI ACCWGGT 1 cut(s) 936
SfaNI GCATC 6 cut(s) 362, 520, 731, 1021, 1045, 1065
SfcI CTRYAG 1 cut(s) 770
SfuI TTCGAA 2 cut(s) 1109, 1277
SinI GGWCC 1 cut(s) 857
SmaI CCCGGG 1 cut(s) 1119
SmiMI CAYNNNNRTG 4 cut(s) 41, 56, 125, 972
Sse9I AATT 5 cut(s) 215, 239, 583, 1019, 1126
SsiI CCGC 1 cut(s) 1200
SspMI CTAG 3 cut(s) 1341, 1388, 1408
SstI GAGCTC 1 cut(s) 415
StyD4I CCNGG 4 cut(s) 868, 936, 1116, 1117
StyI CCWWGG 1 cut(s) 91
TaaI ACNGT 5 cut(s) 124, 373, 655, 709, 1159
TaqI TCGA 4 cut(s) 739, 813, 1109, 1277
TasI AATT 5 cut(s) 215, 239, 583, 1019, 1126
TatI WGTACW 2 cut(s) 1161, 1245
TfiI GAWTC 2 cut(s) 276, 1381
Tru1I TTAA 5 cut(s) 270, 515, 648, 660, 669
Tru9I TTAA 5 cut(s) 270, 515, 648, 660, 669
TscAI CASTG 4 cut(s) 340, 366, 410, 1164
TseFI GTSAC 3 cut(s) 27, 46, 331
TseI GCWGC 4 cut(s) 305, 572, 1222, 1368
Tsp45I GTSAC 3 cut(s) 27, 46, 331
TspDTI ATGAA 5 cut(s) 55, 456, 743, 913, 1119
TspMI CCCGGG 1 cut(s) 1117
TspRI CASTG 4 cut(s) 340, 366, 410, 1164
Van91I CCANNNNNTGG 3 cut(s) 525, 943, 1032
VpaK11BI GGWCC 1 cut(s) 857
XapI RAATTY 1 cut(s) 583
XbaI TCTAGA 1 cut(s) 1340
XcmI CCANNNNNNNNNTGG 2 cut(s) 98, 1033
XmaI CCCGGG 1 cut(s) 1117
XspI CTAG 3 cut(s) 1341, 1388, 1408
Zsp2I ATGCAT 1 cut(s) 535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.