Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0010210

Physical Location & Seq

Genomic Coordinates Forward (+)

3204708 .. 3210041

Gene Structure 5334 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0041200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGGGGTGTGTAATTAGCAGAGAAACGTCCTCGGGAGTAGAGTCTGAGTCTAAGGGTGTGAAGAAGGATTTGAGTGTGGAATCCAATAGGAAGGTAGATGATGTTGCGGTGGCCAAGGTAGATAGTGAGGCTGAAGTCGGGGGTGAGGTTGCTGTTGGTGGGGGTGAGGCTCAGAAGGTGGAGAATGGTCATGAAAGTCAGCGGCCTCCGAAGGGGGAGAGAAGGCGGTCCAAGCCAAACCCGAGGAGTAGTCTGCCACATAAAGCCCGTGGCGAGCAGGTAGCTGCTGGGTGGCCTCCTTGGCTCACGGCTGTGTGTGGGGAGGCGCTCAATGGGTGGATTCCACGAAAAGCAGACACCTTTGAGAAAATTGATAAGATTGGGTCAGGAACATACAGTAATGTGTACAAAGCTAAAGATATGTTGACGGGGAAAATTGTTGCTCTAAAGAAAGTTAGATTTGACAATTTGGAACCTGAGAGTGTGAAGTTTATGGCTAGAGAAATCCTAATTTTGCGGAGATTAGATCATACTAATGTTGTGAAGTTGGAGGGTCTGGTCACTTCAAGGATGTCATGTAGTTTGTACCTGGTGCTTGAATATATGGAACATGACCTAGCTGGACTTGCTGCAAGCCCAGAAATTAAGTTTACAGAAGCGCAGGTCAAATGTTATATGCATCAACTATTATCTGGACTTGAGCACTGTCACAACCGTGGTGTGCTTCATCGTGACATAAAGGGATCCAATCTTCTGATTGACAACGGAGGAGTACTTAAGATTGCTGACTTTGGCTTGGCTTCTTTCTACGATCCAAAGCACAAGCATCCCATGACTAGTCGGGTGGTTACTCTATGGTATCGACCTCCTGAGCTTCTTCTAGGGGCTACTGATTATAGTGTGGGTGTGGACCTTTGGAGTGCCGGTTGCATTTTAGCAGAGTTACTAGCTGGGAAGCCTATCATGCCTGGTCGTACTGAGGTAGAACAACTCCACAAGATATACAAATTATGTGGCTCACCTACAGATGAGTACTGGAAAAAAGCAAAGTTACCAAATGCAACTTTATTTAAGCCCCGAGAGCCTTACAAAAGAAGCATAAGAGAGACTTTCAAAGATTTTCCCCCATCAGCACTGCCTCTAATCGAAAGTTTACTTGCGATTGATCCTGCAGAGCGTCAGACAGCCTCAGCTGCATTGAGTAGTGAGCTTTTCATGACAGAGCCTTATGCTTGTGAACCTTCTAGCCTCCCAAAGTATCCCCCGACCAAAGAAATTGATGCTAAACGTCGAGACGATGAAGCTCGTAGGATAAGAGCTGCTGGTAGAGCCCAGGCTGATGGTGCAAAGAAAACACGTACACGTGAACGTGGTCCTAGGACAATGGCAGCTCCAGAAGCCAATGCGGAGATTCAATCTAATATCGATAGAAGGAGACTAATTACACATAATGCAAAGAGTAAAAGCGAAAAGTTTCCTCCACCGCACCAAGATGGGGCAGTTGGTTACCCATTGGGGGCTTCGCATCATATTGATCCTGCACTTGTTCCTCCTGATGTCCCATTCAGTACAACCTCATTTGGTTATCCTAAAGAACCAATACAAACATGGTCAGGTCCTTTGGTTGACTCCACTGGTCCAAGGAGGAAGAAACATACCGATTCACGAGAACCTTCAAAGTCCTTTATAGGAACTCATAAAGATAAACATCATGATGCGCGAGTTAGAGGAAAGAAAAGTGCAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0004567 GO:0005975 GO:0005976 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009791 GO:0009845 GO:0009987 GO:0010412 GO:0015923 GO:0016052 GO:0016787 GO:0016798 GO:0016985 GO:0016998 GO:0032501 GO:0032502 GO:0043170 GO:0044036 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0046355 GO:0048856 GO:0071554 GO:0071704 GO:0090351 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00051 map00051

Pfam Domains

Protein Families

Cellulase

Protein Analysis

582

Amino Acids

64.37

Weight (kDa)

9.29

Isoelectric Point (pI)

48.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	121 - 404	9.5e-67	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	123 - 336	2.2e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010210)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01930
fragaria_vesca	FvH4_6g09620 FvH4_6g09620
malus_domestica	MD04G1176300.v1.1 MD12G1190600.v1.1
prunus_persica	Prupe.6G295800_v2.0.a1
pyrus_communis	pycom04g15550 pycom12g17780
rosa_chinensis	RchiOBHm_Chr3g0460261
rosa_laevigata	RLG00000025031
rosa_multiflora	Rmu_sc0000449.1_g000017 Rmu_sc0003763.1_g000002
rosa_roxburghii	Rroxscaffold_6G00419680
rosa_rugosa	Rorug03G0041200 Rorug03G0041200 Rorug03G0041200
rosa_samantha	Rh3AG099000 Rh3BG102800 Rh3CG104500 Rh3DG103800
rosa_wichuraiana	Rw3G008390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	268, 652
AccII	CGCG	1 cut(s)	1720
AciI	CCGC	6 cut(s)	107, 202, 226, 517, 1406, 1484
AclWI	GGATC	5 cut(s)	738, 751, 806, 1160, 1529
AcoI	YGGCCR	1 cut(s)	111
AcuI	CTGAAG	1 cut(s)	153
AcvI	CACGTG	1 cut(s)	1364
AfaI	GTAC	7 cut(s)	407, 587, 774, 976, 1034, 1360, 1570
AfiI	CCNNNNNNNGG	3 cut(s)	212, 1495, 1516
AflII	CTTAAG	1 cut(s)	776
AflIII	ACRYGT	2 cut(s)	1355, 1361
AgsI	TTSAA	5 cut(s)	567, 599, 1114, 1415, 1677
AhlI	ACTAGT	1 cut(s)	836
AjnI	CCWGG	3 cut(s)	588, 967, 1332
AleI	CACNNNNGTG	2 cut(s)	311, 714
Alw21I	GWGCWC	1 cut(s)	705
Alw26I	GTCTC	3 cut(s)	1100, 1287, 1429
AlwI	GGATC	5 cut(s)	738, 751, 806, 1160, 1529
Ama87I	CYCGRG	3 cut(s)	31, 241, 1077
AoxI	GGCC	3 cut(s)	111, 203, 293
ApeKI	GCWGC	6 cut(s)	284, 629, 1193, 1319, 1388, 1742
Asp700I	GAANNNNTTC	1 cut(s)	1473
AspA2I	CCTAGG	1 cut(s)	1376
AspLEI	GCGC	3 cut(s)	328, 661, 1720
AspS9I	GGNCC	5 cut(s)	228, 910, 1373, 1616, 1637
AsuHPI	GGTGA	3 cut(s)	155, 176, 1011
AvaI	CYCGRG	3 cut(s)	31, 241, 1077
AvaII	GGWCC	5 cut(s)	228, 910, 1373, 1616, 1637
AvrII	CCTAGG	1 cut(s)	1376
BalI	TGGCCA	1 cut(s)	113
BamHI	GGATCC	1 cut(s)	743
BanII	GRGCYC	1 cut(s)	1333
BauI	CACGAG	1 cut(s)	1665
BbrPI	CACGTG	1 cut(s)	1364
Bbv12I	GWGCWC	1 cut(s)	705
BbvCI	CCTCAGC	1 cut(s)	1189
BbvI	GCAGC	5 cut(s)	271, 616, 1180, 1306, 1400
BccI	CCATC	3 cut(s)	1135, 1334, 1487
BceAI	ACGGC	1 cut(s)	324
BciT130I	CCWGG	3 cut(s)	590, 969, 1334
BciVI	GTATCC	1 cut(s)	1269
BcoDI	GTCTC	3 cut(s)	1100, 1287, 1429
BcuI	ACTAGT	1 cut(s)	836
BfaI	CTAG	7 cut(s)	498, 617, 837, 881, 947, 1245, 1377
BfmI	CTRYAG	2 cut(s)	1023, 1170
BfoI	RGCGCY	1 cut(s)	329
BfrI	CTTAAG	1 cut(s)	776
BfuAI	ACCTGC	2 cut(s)	268, 652
BfuI	GTATCC	1 cut(s)	1269
BglI	GCCNNNNNGGC	1 cut(s)	301
BisI	GCNGC	7 cut(s)	203, 285, 630, 1194, 1320, 1389, 1743
BlnI	CCTAGG	1 cut(s)	1376
BlsI	GCNGC	7 cut(s)	204, 286, 631, 1195, 1321, 1390, 1744
BmcAI	AGTACT	2 cut(s)	774, 1034
Bme1390I	CCNGG	3 cut(s)	590, 969, 1334
Bme18I	GGWCC	5 cut(s)	228, 910, 1373, 1616, 1637
BmeT110I	CYCGRG	3 cut(s)	31, 241, 1077
BmgT120I	GGNCC	5 cut(s)	228, 910, 1373, 1616, 1637
BmiI	GGNNCC	2 cut(s)	474, 745
BmrFI	CCNGG	3 cut(s)	590, 969, 1334
BmsI	GCATC	5 cut(s)	688, 835, 1270, 1534, 1705
BpmI	CTGGAG	1 cut(s)	1377
Bpu10I	CCTNAGC	2 cut(s)	870, 1189
BpuEI	CTTGAG	1 cut(s)	719
Bsa29I	ATCGAT	1 cut(s)	1425
BsaAI	YACGTR	2 cut(s)	1358, 1364
BsaBI	GATNNNNATC	1 cut(s)	1707
BsaJI	CCNNGG	9 cut(s)	30, 114, 242, 268, 299, 715, 1332, 1376, 1640
BsaXI	ACNNNNNCTCC	2 cut(s)	910, 940
Bsc4I	CCNNNNNNNGG	3 cut(s)	212, 1495, 1516
Bse118I	RCCGGY	1 cut(s)	923
Bse1I	ACTGG	2 cut(s)	1040, 1639
Bse8I	GATNNNNATC	1 cut(s)	1707
BseBI	CCWGG	3 cut(s)	590, 969, 1334
BseCI	ATCGAT	1 cut(s)	1425
BseDI	CCNNGG	9 cut(s)	30, 114, 242, 268, 299, 715, 1332, 1376, 1640
BseGI	GGATG	2 cut(s)	576, 826
BseJI	GATNNNNATC	1 cut(s)	1707
BseLI	CCNNNNNNNGG	3 cut(s)	212, 1495, 1516
BseMII	CTCAG	6 cut(s)	36, 185, 468, 861, 969, 1203
BseNI	ACTGG	2 cut(s)	1040, 1639
BseRI	GAGGAG	2 cut(s)	259, 783
BseXI	GCAGC	5 cut(s)	271, 616, 1180, 1306, 1400
BseYI	CCCAGC	2 cut(s)	287, 950
BsgI	GTGCAG	1 cut(s)	1524
Bsh1236I	CGCG	1 cut(s)	1720
BshFI	GGCC	3 cut(s)	113, 205, 295
BshVI	ATCGAT	1 cut(s)	1425
BsiHKAI	GWGCWC	1 cut(s)	705
BsiHKCI	CYCGRG	3 cut(s)	31, 241, 1077
BsiSI	CCGG	1 cut(s)	924
BslFI	GGGAC	1 cut(s)	1544
BslI	CCNNNNNNNGG	3 cut(s)	212, 1495, 1516
BsmAI	GTCTC	3 cut(s)	1100, 1287, 1429
BsmBI	CGTCTC	1 cut(s)	1287
BsmFI	GGGAC	1 cut(s)	1544
BsnI	GGCC	3 cut(s)	113, 205, 295
BsoBI	CYCGRG	3 cut(s)	31, 241, 1077
Bsp1286I	GDGCHC	2 cut(s)	705, 1333
Bsp1407I	TGTACA	1 cut(s)	405
Bsp143I	GATC	5 cut(s)	526, 743, 811, 1165, 1534
BspACI	CCGC	6 cut(s)	107, 202, 226, 517, 1406, 1484
BspANI	GGCC	3 cut(s)	113, 205, 295
BspCNI	CTCAG	6 cut(s)	37, 184, 469, 862, 970, 1202
BspDI	ATCGAT	1 cut(s)	1425
BspFNI	CGCG	1 cut(s)	1720
BspHI	TCATGA	3 cut(s)	190, 1215, 1711
BspLI	GGNNCC	2 cut(s)	474, 745
BspMAI	CTGCAG	1 cut(s)	1174
BspMI	ACCTGC	2 cut(s)	268, 652
BspPI	GGATC	5 cut(s)	738, 751, 806, 1160, 1529
BspTI	CTTAAG	1 cut(s)	776
BsrFI	RCCGGY	1 cut(s)	923
BsrGI	TGTACA	1 cut(s)	405
BsrI	ACTGG	2 cut(s)	1040, 1639
BssAI	RCCGGY	1 cut(s)	923
BssECI	CCNNGG	9 cut(s)	30, 114, 242, 268, 299, 715, 1332, 1376, 1640
BssMI	GATC	5 cut(s)	526, 743, 811, 1165, 1534
BssSI	CACGAG	1 cut(s)	1665
BssT1I	CCWWGG	4 cut(s)	114, 299, 1376, 1640
Bst2BI	CACGAG	1 cut(s)	1665
Bst2UI	CCWGG	3 cut(s)	590, 969, 1334
Bst4CI	ACNGT	3 cut(s)	398, 707, 716
BstAFI	CTTAAG	1 cut(s)	776
BstAUI	TGTACA	1 cut(s)	405
BstBAI	YACGTR	2 cut(s)	1358, 1364
BstC8I	GCNNGC	2 cut(s)	275, 634
BstDEI	CTNAG	7 cut(s)	45, 51, 171, 477, 870, 978, 1189
BstDSI	CCRYGG	2 cut(s)	268, 715
BstEII	GGTNACC	1 cut(s)	1505
BstF5I	GGATG	2 cut(s)	576, 826
BstFNI	CGCG	1 cut(s)	1720
BstH2I	RGCGCY	1 cut(s)	329
BstHHI	GCGC	3 cut(s)	328, 661, 1720
BstKTI	GATC	5 cut(s)	529, 746, 814, 1168, 1537
BstMAI	GTCTC	3 cut(s)	1100, 1287, 1429
BstMBI	GATC	5 cut(s)	526, 743, 811, 1165, 1534
BstMWI	GCNNNNNNNGC	9 cut(s)	232, 301, 626, 964, 1081, 1193, 1328, 1343, 1397
BstNI	CCWGG	3 cut(s)	590, 969, 1334
BstPI	GGTNACC	1 cut(s)	1505
BstSCI	CCNGG	3 cut(s)	588, 967, 1332
BstSFI	CTRYAG	2 cut(s)	1023, 1170
BstUI	CGCG	1 cut(s)	1720
BstV1I	GCAGC	5 cut(s)	271, 616, 1180, 1306, 1400
BstX2I	RGATCY	1 cut(s)	743
BstXI	CCANNNNNNTGG	1 cut(s)	1340
BstYI	RGATCY	1 cut(s)	743
Bsu15I	ATCGAT	1 cut(s)	1425
BsuI	GTATCC	1 cut(s)	1269
BsuRI	GGCC	3 cut(s)	113, 205, 295
BsuTUI	ATCGAT	1 cut(s)	1425
BtgI	CCRYGG	2 cut(s)	268, 715
BtsCI	GGATG	2 cut(s)	576, 826
BtsI	GCAGTG	1 cut(s)	1133
BtsIMutI	CAGTG	3 cut(s)	703, 1133, 1632
BveI	ACCTGC	2 cut(s)	268, 652
Cac8I	GCNNGC	2 cut(s)	275, 634
CciI	TCATGA	3 cut(s)	190, 1215, 1711
CfoI	GCGC	3 cut(s)	328, 661, 1720
Cfr10I	RCCGGY	1 cut(s)	923
Cfr13I	GGNCC	5 cut(s)	228, 910, 1373, 1616, 1637
ClaI	ATCGAT	1 cut(s)	1425
CseI	GACGC	1 cut(s)	1166
CsiI	ACCWGGT	1 cut(s)	588
Csp6I	GTAC	7 cut(s)	406, 586, 773, 975, 1033, 1359, 1569
CspCI	CAANNNNNGTGG	2 cut(s)	994, 1029
CviAII	CATG	8 cut(s)	191, 576, 611, 832, 964, 1216, 1608, 1712
CviQI	GTAC	7 cut(s)	406, 586, 773, 975, 1033, 1359, 1569
DdeI	CTNAG	7 cut(s)	45, 51, 171, 477, 870, 978, 1189
DpnI	GATC	5 cut(s)	528, 745, 813, 1167, 1536
DpnII	GATC	5 cut(s)	526, 743, 811, 1165, 1534
EaeI	YGGCCR	1 cut(s)	111
Eco130I	CCWWGG	4 cut(s)	114, 299, 1376, 1640
Eco24I	GRGCYC	1 cut(s)	1333
Eco47I	GGWCC	5 cut(s)	228, 910, 1373, 1616, 1637
Eco57I	CTGAAG	1 cut(s)	153
Eco72I	CACGTG	1 cut(s)	1364
Eco88I	CYCGRG	3 cut(s)	31, 241, 1077
Eco91I	GGTNACC	1 cut(s)	1505
EcoO109I	RGGNCCY	1 cut(s)	1616
EcoO65I	GGTNACC	1 cut(s)	1505
EcoRII	CCWGG	3 cut(s)	588, 967, 1332
EcoT14I	CCWWGG	4 cut(s)	114, 299, 1376, 1640
EcoT22I	ATGCAT	1 cut(s)	681
EcoT38I	GRGCYC	1 cut(s)	1333
ErhI	CCWWGG	4 cut(s)	114, 299, 1376, 1640
Esp3I	CGTCTC	1 cut(s)	1287
FaeI	CATG	8 cut(s)	194, 579, 614, 835, 967, 1219, 1611, 1715
FalI	AAGNNNNNCTT	3 cut(s)	1093, 1125, 1729
FaqI	GGGAC	1 cut(s)	1544
FatI	CATG	8 cut(s)	190, 575, 610, 831, 963, 1215, 1607, 1711
Fnu4HI	GCNGC	7 cut(s)	203, 285, 630, 1194, 1320, 1389, 1743
FokI	GGATG	2 cut(s)	583, 813
FriOI	GRGCYC	1 cut(s)	1333
Fsp4HI	GCNGC	7 cut(s)	203, 285, 630, 1194, 1320, 1389, 1743
FspBI	CTAG	7 cut(s)	498, 617, 837, 881, 947, 1245, 1377
GlaI	GCGC	3 cut(s)	327, 660, 1719
GluI	GCNGC	7 cut(s)	203, 285, 630, 1194, 1320, 1389, 1743
GsaI	CCCAGC	2 cut(s)	291, 954
GsuI	CTGGAG	1 cut(s)	1377
HaeII	RGCGCY	1 cut(s)	329
HaeIII	GGCC	3 cut(s)	113, 205, 295
HapII	CCGG	1 cut(s)	924
HgaI	GACGC	1 cut(s)	1166
HhaI	GCGC	3 cut(s)	328, 661, 1720
Hin1II	CATG	8 cut(s)	194, 579, 614, 835, 967, 1219, 1611, 1715
Hin6I	GCGC	3 cut(s)	326, 659, 1718
HinP1I	GCGC	3 cut(s)	326, 659, 1718
HincII	GTYRAC	2 cut(s)	426, 1627
HindII	GTYRAC	2 cut(s)	426, 1627
HinfI	GANTC	7 cut(s)	41, 47, 80, 340, 1411, 1628, 1661
HpaII	CCGG	1 cut(s)	924
HphI	GGTGA	3 cut(s)	155, 176, 1011
Hpy166II	GTNNAC	9 cut(s)	406, 426, 651, 910, 1154, 1238, 1361, 1367, 1627
Hpy188I	TCNGA	5 cut(s)	46, 174, 210, 756, 1182
Hpy8I	GTNNAC	9 cut(s)	406, 426, 651, 910, 1154, 1238, 1361, 1367, 1627
Hpy99I	CGWCG	1 cut(s)	1293
HpyAV	CCTTC	8 cut(s)	58, 85, 169, 205, 216, 1251, 1425, 1683
HpyCH4III	ACNGT	3 cut(s)	398, 707, 716
HpyCH4IV	ACGT	5 cut(s)	26, 1288, 1357, 1363, 1369
HpyF10VI	GCNNNNNNNGC	9 cut(s)	232, 301, 626, 964, 1081, 1193, 1328, 1343, 1397
HpyF3I	CTNAG	7 cut(s)	45, 51, 171, 477, 870, 978, 1189
HpySE526I	ACGT	5 cut(s)	26, 1288, 1357, 1363, 1369
Hsp92II	CATG	8 cut(s)	194, 579, 614, 835, 967, 1219, 1611, 1715
HspAI	GCGC	3 cut(s)	326, 659, 1718
Kzo9I	GATC	5 cut(s)	526, 743, 811, 1165, 1534
LmnI	GCTCC	1 cut(s)	1396
Lsp1109I	GCAGC	5 cut(s)	271, 616, 1180, 1306, 1400
LweI	GCATC	5 cut(s)	688, 835, 1270, 1534, 1705
MabI	ACCWGGT	1 cut(s)	588
MaeI	CTAG	7 cut(s)	498, 617, 837, 881, 947, 1245, 1377
MaeII	ACGT	5 cut(s)	26, 1288, 1357, 1363, 1369
MaeIII	GTNAC	7 cut(s)	559, 707, 731, 847, 942, 1050, 1505
MalI	GATC	5 cut(s)	528, 745, 813, 1167, 1536
MboI	GATC	5 cut(s)	526, 743, 811, 1165, 1534
MboII	GAAGA	4 cut(s)	73, 743, 869, 1660
MflI	RGATCY	1 cut(s)	743
MhlI	GDGCHC	2 cut(s)	705, 1333
MlsI	TGGCCA	1 cut(s)	113
MluCI	AATT	9 cut(s)	12, 369, 435, 466, 510, 642, 1007, 1275, 1440
MluNI	TGGCCA	1 cut(s)	113
MlyI	GAGTC	3 cut(s)	50, 56, 1622
MmeI	TCCRAC	1 cut(s)	528
Mox20I	TGGCCA	1 cut(s)	113
Mph1103I	ATGCAT	1 cut(s)	681
MroXI	GAANNNNTTC	1 cut(s)	1473
MscI	TGGCCA	1 cut(s)	113
MseI	TTAA	4 cut(s)	645, 777, 1071, 1747
MslI	CAYNNNNRTG	5 cut(s)	311, 534, 714, 1491, 1713
Msp20I	TGGCCA	1 cut(s)	113
MspA1I	CMGCKG	2 cut(s)	202, 1193
MspCI	CTTAAG	1 cut(s)	776
MspI	CCGG	1 cut(s)	924
MspR9I	CCNGG	3 cut(s)	590, 969, 1334
MvaI	CCWGG	3 cut(s)	590, 969, 1334
MvnI	CGCG	1 cut(s)	1720
MwoI	GCNNNNNNNGC	9 cut(s)	232, 301, 626, 964, 1081, 1193, 1328, 1343, 1397
NdeII	GATC	5 cut(s)	526, 743, 811, 1165, 1534
NlaIII	CATG	8 cut(s)	194, 579, 614, 835, 967, 1219, 1611, 1715
NlaIV	GGNNCC	2 cut(s)	474, 745
NmuCI	GTSAC	3 cut(s)	559, 707, 731
NsiI	ATGCAT	1 cut(s)	681
OliI	CACNNNNGTG	2 cut(s)	311, 714
PagI	TCATGA	3 cut(s)	190, 1215, 1711
PdmI	GAANNNNTTC	1 cut(s)	1473
PfeI	GAWTC	4 cut(s)	80, 340, 1411, 1661
PkrI	GCNGC	7 cut(s)	204, 286, 631, 1195, 1321, 1390, 1744
PleI	GAGTC	3 cut(s)	49, 55, 1622
PmaCI	CACGTG	1 cut(s)	1364
PmlI	CACGTG	1 cut(s)	1364
PpsI	GAGTC	3 cut(s)	49, 55, 1622
Ppu21I	YACGTR	2 cut(s)	1358, 1364
PpuMI	RGGWCCY	1 cut(s)	1616
Psp5II	RGGWCCY	1 cut(s)	1616
Psp6I	CCWGG	3 cut(s)	588, 967, 1332
PspCI	CACGTG	1 cut(s)	1364
PspEI	GGTNACC	1 cut(s)	1505
PspFI	CCCAGC	2 cut(s)	287, 950
PspGI	CCWGG	3 cut(s)	588, 967, 1332
PspN4I	GGNNCC	2 cut(s)	474, 745
PspPI	GGNCC	5 cut(s)	228, 910, 1373, 1616, 1637
PspPPI	RGGWCCY	1 cut(s)	1616
PstI	CTGCAG	1 cut(s)	1174
PsuI	RGATCY	1 cut(s)	743
PvuII	CAGCTG	1 cut(s)	1193
RsaI	GTAC	7 cut(s)	407, 587, 774, 976, 1034, 1360, 1570
RsaNI	GTAC	7 cut(s)	406, 586, 773, 975, 1033, 1359, 1569
RseI	CAYNNNNRTG	5 cut(s)	311, 534, 714, 1491, 1713
SaqAI	TTAA	4 cut(s)	645, 777, 1071, 1747
SatI	GCNGC	7 cut(s)	203, 285, 630, 1194, 1320, 1389, 1743
Sau3AI	GATC	5 cut(s)	526, 743, 811, 1165, 1534
Sau96I	GGNCC	5 cut(s)	228, 910, 1373, 1616, 1637
ScaI	AGTACT	2 cut(s)	774, 1034
SchI	GAGTC	3 cut(s)	50, 56, 1622
ScrFI	CCNGG	3 cut(s)	590, 969, 1334
SduI	GDGCHC	2 cut(s)	705, 1333
SexAI	ACCWGGT	1 cut(s)	588
SfaNI	GCATC	5 cut(s)	688, 835, 1270, 1534, 1705
SfcI	CTRYAG	2 cut(s)	1023, 1170
SinI	GGWCC	5 cut(s)	228, 910, 1373, 1616, 1637
SmiMI	CAYNNNNRTG	5 cut(s)	311, 534, 714, 1491, 1713
SmlI	CTYRAG	2 cut(s)	698, 776
SmoI	CTYRAG	2 cut(s)	698, 776
SpeI	ACTAGT	1 cut(s)	836
Sse9I	AATT	9 cut(s)	12, 369, 435, 466, 510, 642, 1007, 1275, 1440
SsiI	CCGC	6 cut(s)	107, 202, 226, 517, 1406, 1484
SspMI	CTAG	7 cut(s)	498, 617, 837, 881, 947, 1245, 1377
StyD4I	CCNGG	3 cut(s)	588, 967, 1332
StyI	CCWWGG	4 cut(s)	114, 299, 1376, 1640
TaaI	ACNGT	3 cut(s)	398, 707, 716
TaiI	ACGT	5 cut(s)	29, 1291, 1360, 1366, 1372
TaqI	TCGA	4 cut(s)	862, 1146, 1291, 1425
TasI	AATT	9 cut(s)	12, 369, 435, 466, 510, 642, 1007, 1275, 1440
TatI	WGTACW	4 cut(s)	405, 772, 1032, 1568
TauI	GCSGC	1 cut(s)	205
TfiI	GAWTC	4 cut(s)	80, 340, 1411, 1661
Tru1I	TTAA	4 cut(s)	645, 777, 1071, 1747
Tru9I	TTAA	4 cut(s)	645, 777, 1071, 1747
TscAI	CASTG	3 cut(s)	710, 1140, 1639
TseFI	GTSAC	3 cut(s)	559, 707, 731
TseI	GCWGC	6 cut(s)	284, 629, 1193, 1319, 1388, 1742
Tsp45I	GTSAC	3 cut(s)	559, 707, 731
TspDTI	ATGAA	4 cut(s)	207, 716, 1204, 1314
TspGWI	ACGGA	1 cut(s)	780
TspRI	CASTG	3 cut(s)	710, 1140, 1639
Vha464I	CTTAAG	1 cut(s)	776
VpaK11BI	GGWCC	5 cut(s)	228, 910, 1373, 1616, 1637
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1605
XmaJI	CCTAGG	1 cut(s)	1376
XmnI	GAANNNNTTC	1 cut(s)	1473
XspI	CTAG	7 cut(s)	498, 617, 837, 881, 947, 1245, 1377
ZrmI	AGTACT	2 cut(s)	774, 1034
Zsp2I	ATGCAT	1 cut(s)	681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.