Belongs to the small GTPase superfamily. Arf family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10630 AT1G10630 |
| fragaria_vesca | FvH4_4g21070 FvH4_4g21070 FvH4_6g08050 FvH4_6g08050 |
| prunus_persica | Prupe.6G308600_v2.0.a1 Prupe.6G308600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0457721 |
| rosa_laevigata | RLG00000025191 |
| rosa_multiflora | Rmu_sc0007395.1_g000001 Rmu_sc0028418.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00421540 |
| rosa_rugosa | Rorug03G0022800 Rorug03G0022900 Rorug03G0023000 |
| rosa_samantha | Rh3AG083600 Rh3BG086100 Rh3DG087000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 146 |
| AcsI | RAATTY | 1 cut(s) | 57 |
| AfaI | GTAC | 3 cut(s) | 104, 461, 472 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 146, 486 |
| AflII | CTTAAG | 1 cut(s) | 110 |
| AflIII | ACRYGT | 1 cut(s) | 473 |
| AgsI | TTSAA | 3 cut(s) | 154, 161, 334 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 517 |
| AjnI | CCWGG | 1 cut(s) | 210 |
| AluBI | AGCT | 4 cut(s) | 109, 115, 186, 319 |
| AluI | AGCT | 4 cut(s) | 109, 115, 186, 319 |
| Alw26I | GTCTC | 3 cut(s) | 77, 229, 437 |
| AoxI | GGCC | 1 cut(s) | 208 |
| ApeKI | GCWGC | 4 cut(s) | 80, 319, 361, 407 |
| ApoI | RAATTY | 1 cut(s) | 57 |
| AsuHPI | GGTGA | 1 cut(s) | 7 |
| BanII | GRGCYC | 1 cut(s) | 498 |
| BbvI | GCAGC | 4 cut(s) | 67, 306, 348, 394 |
| BciT130I | CCWGG | 1 cut(s) | 212 |
| BcoDI | GTCTC | 3 cut(s) | 77, 229, 437 |
| BfaI | CTAG | 1 cut(s) | 309 |
| BfrI | CTTAAG | 1 cut(s) | 110 |
| BglII | AGATCT | 1 cut(s) | 385 |
| BisI | GCNGC | 4 cut(s) | 81, 320, 362, 408 |
| BlsI | GCNGC | 4 cut(s) | 82, 321, 363, 409 |
| Bme1390I | CCNGG | 1 cut(s) | 212 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 517 |
| BmrFI | CCNGG | 1 cut(s) | 212 |
| BmsI | GCATC | 2 cut(s) | 67, 343 |
| BsaBI | GATNNNNATC | 1 cut(s) | 291 |
| BsaI | GGTCTC | 2 cut(s) | 77, 437 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 111, 141, 417, 447 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 146, 486 |
| Bse1I | ACTGG | 2 cut(s) | 461, 518 |
| Bse3DI | GCAATG | 2 cut(s) | 289, 405 |
| Bse8I | GATNNNNATC | 1 cut(s) | 291 |
| BseBI | CCWGG | 1 cut(s) | 212 |
| BseGI | GGATG | 6 cut(s) | 205, 319, 333, 346, 358, 462 |
| BseJI | GATNNNNATC | 1 cut(s) | 291 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 146, 486 |
| BseMI | GCAATG | 2 cut(s) | 289, 405 |
| BseMII | CTCAG | 1 cut(s) | 402 |
| BseNI | ACTGG | 2 cut(s) | 461, 518 |
| BseXI | GCAGC | 4 cut(s) | 67, 306, 348, 394 |
| BshFI | GGCC | 1 cut(s) | 210 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 146, 486 |
| BsmAI | GTCTC | 3 cut(s) | 77, 229, 437 |
| BsmI | GAATGC | 1 cut(s) | 409 |
| BsnI | GGCC | 1 cut(s) | 210 |
| Bso31I | GGTCTC | 2 cut(s) | 77, 437 |
| Bsp1286I | GDGCHC | 1 cut(s) | 498 |
| Bsp1407I | TGTACA | 1 cut(s) | 102 |
| Bsp143I | GATC | 5 cut(s) | 123, 286, 292, 385, 414 |
| BspANI | GGCC | 1 cut(s) | 210 |
| BspCNI | CTCAG | 1 cut(s) | 403 |
| BspTI | CTTAAG | 1 cut(s) | 110 |
| BspTNI | GGTCTC | 2 cut(s) | 77, 437 |
| BsrDI | GCAATG | 2 cut(s) | 289, 405 |
| BsrGI | TGTACA | 1 cut(s) | 102 |
| BsrI | ACTGG | 2 cut(s) | 461, 518 |
| BssMI | GATC | 5 cut(s) | 123, 286, 292, 385, 414 |
| Bst2UI | CCWGG | 1 cut(s) | 212 |
| Bst4CI | ACNGT | 2 cut(s) | 166, 193 |
| Bst6I | CTCTTC | 1 cut(s) | 447 |
| BstAFI | CTTAAG | 1 cut(s) | 110 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 404 |
| BstAUI | TGTACA | 1 cut(s) | 102 |
| BstDEI | CTNAG | 1 cut(s) | 411 |
| BstF5I | GGATG | 6 cut(s) | 205, 319, 333, 346, 358, 462 |
| BstKTI | GATC | 5 cut(s) | 126, 289, 295, 388, 417 |
| BstMAI | GTCTC | 3 cut(s) | 77, 229, 437 |
| BstMBI | GATC | 5 cut(s) | 123, 286, 292, 385, 414 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 404, 539 |
| BstNI | CCWGG | 1 cut(s) | 212 |
| BstNSI | RCATGY | 1 cut(s) | 477 |
| BstSCI | CCNGG | 1 cut(s) | 210 |
| BstV1I | GCAGC | 4 cut(s) | 67, 306, 348, 394 |
| BstX2I | RGATCY | 1 cut(s) | 385 |
| BstYI | RGATCY | 1 cut(s) | 385 |
| BsuRI | GGCC | 1 cut(s) | 210 |
| BtsCI | GGATG | 6 cut(s) | 205, 319, 333, 346, 358, 462 |
| BtsI | GCAGTG | 1 cut(s) | 363 |
| BtsIMutI | CAGTG | 3 cut(s) | 363, 417, 454 |
| Csp6I | GTAC | 3 cut(s) | 103, 460, 471 |
| CviAII | CATG | 1 cut(s) | 474 |
| CviQI | GTAC | 3 cut(s) | 103, 460, 471 |
| DdeI | CTNAG | 1 cut(s) | 411 |
| DpnI | GATC | 5 cut(s) | 125, 288, 294, 387, 416 |
| DpnII | GATC | 5 cut(s) | 123, 286, 292, 385, 414 |
| DriI | GACNNNNNGTC | 1 cut(s) | 517 |
| Eam1104I | CTCTTC | 1 cut(s) | 447 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 517 |
| EarI | CTCTTC | 1 cut(s) | 447 |
| Eco24I | GRGCYC | 1 cut(s) | 498 |
| Eco31I | GGTCTC | 2 cut(s) | 77, 437 |
| EcoRI | GAATTC | 1 cut(s) | 57 |
| EcoRII | CCWGG | 1 cut(s) | 210 |
| EcoT38I | GRGCYC | 1 cut(s) | 498 |
| FaeI | CATG | 1 cut(s) | 477 |
| FaiI | YATR | 8 cut(s) | 65, 98, 174, 232, 324, 475, 501, 530 |
| FatI | CATG | 1 cut(s) | 473 |
| Fnu4HI | GCNGC | 4 cut(s) | 81, 320, 362, 408 |
| FokI | GGATG | 6 cut(s) | 212, 326, 340, 353, 365, 449 |
| FriOI | GRGCYC | 1 cut(s) | 498 |
| Fsp4HI | GCNGC | 4 cut(s) | 81, 320, 362, 408 |
| FspBI | CTAG | 1 cut(s) | 309 |
| GluI | GCNGC | 4 cut(s) | 81, 320, 362, 408 |
| HaeIII | GGCC | 1 cut(s) | 210 |
| Hin1II | CATG | 1 cut(s) | 477 |
| HincII | GTYRAC | 1 cut(s) | 449 |
| HindII | GTYRAC | 1 cut(s) | 449 |
| HindIII | AAGCTT | 1 cut(s) | 107 |
| HinfI | GANTC | 2 cut(s) | 150, 220 |
| HphI | GGTGA | 1 cut(s) | 7 |
| Hpy166II | GTNNAC | 1 cut(s) | 449 |
| Hpy188I | TCNGA | 1 cut(s) | 119 |
| Hpy188III | TCNNGA | 4 cut(s) | 74, 127, 290, 509 |
| Hpy8I | GTNNAC | 1 cut(s) | 449 |
| HpyAV | CCTTC | 1 cut(s) | 485 |
| HpyCH4III | ACNGT | 2 cut(s) | 166, 193 |
| HpyCH4V | TGCA | 3 cut(s) | 322, 356, 398 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 404, 539 |
| HpyF3I | CTNAG | 1 cut(s) | 411 |
| Hsp92II | CATG | 1 cut(s) | 477 |
| Kzo9I | GATC | 5 cut(s) | 123, 286, 292, 385, 414 |
| LpnPI | CCDG | 6 cut(s) | 69, 197, 224, 442, 471, 499 |
| Lsp1109I | GCAGC | 4 cut(s) | 67, 306, 348, 394 |
| LweI | GCATC | 2 cut(s) | 67, 343 |
| MaeI | CTAG | 1 cut(s) | 309 |
| MaeIII | GTNAC | 1 cut(s) | 127 |
| MalI | GATC | 5 cut(s) | 125, 288, 294, 387, 416 |
| MboI | GATC | 5 cut(s) | 123, 286, 292, 385, 414 |
| MboII | GAAGA | 1 cut(s) | 434 |
| MfeI | CAATTG | 1 cut(s) | 144 |
| MflI | RGATCY | 1 cut(s) | 385 |
| MhlI | GDGCHC | 1 cut(s) | 498 |
| MluCI | AATT | 2 cut(s) | 57, 144 |
| MmeI | TCCRAC | 3 cut(s) | 164, 184, 546 |
| MnlI | CCTC | 6 cut(s) | 200, 298, 331, 342, 493, 496 |
| MseI | TTAA | 2 cut(s) | 111, 544 |
| MspCI | CTTAAG | 1 cut(s) | 110 |
| MspR9I | CCNGG | 1 cut(s) | 212 |
| MunI | CAATTG | 1 cut(s) | 144 |
| Mva1269I | GAATGC | 1 cut(s) | 409 |
| MvaI | CCWGG | 1 cut(s) | 212 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 404, 539 |
| NdeII | GATC | 5 cut(s) | 123, 286, 292, 385, 414 |
| NlaIII | CATG | 1 cut(s) | 477 |
| NmuCI | GTSAC | 1 cut(s) | 127 |
| NspI | RCATGY | 1 cut(s) | 477 |
| PciI | ACATGT | 1 cut(s) | 473 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 123 |
| PctI | GAATGC | 1 cut(s) | 409 |
| PfeI | GAWTC | 2 cut(s) | 150, 220 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 146 |
| PkrI | GCNGC | 4 cut(s) | 82, 321, 363, 409 |
| PscI | ACATGT | 1 cut(s) | 473 |
| Psp6I | CCWGG | 1 cut(s) | 210 |
| PspGI | CCWGG | 1 cut(s) | 210 |
| PsuI | RGATCY | 1 cut(s) | 385 |
| RsaI | GTAC | 3 cut(s) | 104, 461, 472 |
| RsaNI | GTAC | 3 cut(s) | 103, 460, 471 |
| SaqAI | TTAA | 2 cut(s) | 111, 544 |
| SatI | GCNGC | 4 cut(s) | 81, 320, 362, 408 |
| Sau3AI | GATC | 5 cut(s) | 123, 286, 292, 385, 414 |
| ScrFI | CCNGG | 1 cut(s) | 212 |
| SduI | GDGCHC | 1 cut(s) | 498 |
| SetI | ASST | 6 cut(s) | 111, 117, 188, 229, 321, 485 |
| SfaNI | GCATC | 2 cut(s) | 67, 343 |
| SmlI | CTYRAG | 1 cut(s) | 110 |
| SmoI | CTYRAG | 1 cut(s) | 110 |
| Sse9I | AATT | 2 cut(s) | 57, 144 |
| SspMI | CTAG | 1 cut(s) | 309 |
| StyD4I | CCNGG | 1 cut(s) | 210 |
| TaaI | ACNGT | 2 cut(s) | 166, 193 |
| TaqI | TCGA | 2 cut(s) | 75, 223 |
| TaqII | GACCGA | 2 cut(s) | 59, 419 |
| TasI | AATT | 2 cut(s) | 57, 144 |
| TatI | WGTACW | 2 cut(s) | 102, 470 |
| TfiI | GAWTC | 2 cut(s) | 150, 220 |
| Tru1I | TTAA | 2 cut(s) | 111, 544 |
| Tru9I | TTAA | 2 cut(s) | 111, 544 |
| TscAI | CASTG | 3 cut(s) | 363, 424, 461 |
| TseFI | GTSAC | 1 cut(s) | 127 |
| TseI | GCWGC | 4 cut(s) | 80, 319, 361, 407 |
| Tsp45I | GTSAC | 1 cut(s) | 127 |
| TspDTI | ATGAA | 1 cut(s) | 416 |
| TspRI | CASTG | 3 cut(s) | 363, 424, 461 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 146 |
| Vha464I | CTTAAG | 1 cut(s) | 110 |
| XapI | RAATTY | 1 cut(s) | 57 |
| XceI | RCATGY | 1 cut(s) | 477 |
| XspI | CTAG | 1 cut(s) | 309 |