Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0011642

Physical Location & Seq

Genomic Coordinates Forward (+)

1822827 .. 1824458

Gene Structure 1632 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0022800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1302 bp

ATGAGAGCAACAATGGCAGTGTTTAAGTGCATTAAGAGAATGATTTATATGTGTATATTGGTTCTCTTCCTGTTCGGCTTCATTGCCGAAACACGAACTGCCCCAACAACAGTCGATGACGACCCCGAGGAAGTTGCTTCCATGGTCTCCTTGAGCATCCAAAACAGCATCGAAAAAAAGCTCAGGCAACTCCAGGGATCATCCTCATTATCATGTGCTACCGGGAATTCCATCGACGACTGTTGGCGATGTGACTCCAATTGGTACAACAATCGGAAACGCCTCGCGGATTGCGCTATTGGTTTCGGCAGGAACACAATTGGAGGCCGCGACGGGCGCTTCTACATCGTCACTGACTCTAGTGACGACGATGCCGTCAACCTTAAAGTCGGGACCCTTCGCCACGCTGTTATACAATCCGAGCCTCTATGGATTGTGTTCCAGCGTGACATGGTGATCCAGCTCAAGCAGGAGCTTATCATGAACAGCTATAAAACCATTGACGGCCGCGGAGCCAATGTTCACATTGCAAATGAAGCATGCATTACAATCCAAAACGTCACGAACATCATAATACATGGCCTCCACATCCATGACTGCAAGCCTACGGGGAATGCCATGGTGAGGAGCTCACCGTCACACTTTGGTTGGAGAGGAATGGCAGACGGTGATGCTGTGTCGATTTTCGGCTCCAGCAACGTGTGGATTGATCACAACTCACTCACCAACTGCGCCGACGGCCTCGTGGATGTTGTCATGGCCTCAACTGCAGTTACAATCTCTAACAATTACTTCTCGCACCATAATGATGTCATGTTGTTTGGTCACAGCGACTCTTATACTGGAGACAAGGACATGCAAGTGACGGTTGCTTACAACCACTTTGGGGAAGGACTGATGCAAAGGTTGCCGCATTGTAGGCACGGTTATTGTCATGTGGTGAACAATGACTACAGCCACGGTTGGGGGATATACGCCATCGGTGGAGGTGCAAACCCTACCATCAACAGTGAAGGCAACCGATTTGTTGCTGATCTGAAAAGGTACCCGGATTCGAGTGAGGTTACCAAGAGGACTTCGGGGGACAAGTTGGAGTGGAAGAACTGGAATTGGATTTCTCAGGGAGATTTGTTCTTGAATGGTGCCTACTTTGTTCCGTCTGGAGCAACCGGAGCTAACTCGGAGGCCTATGCTAAGGCCTCGAGCTATGCAAAAGCTAAGAAATCTTCCATGGTTGGAGCCATAACTTCTGCTGCTGGTGCACTCACCTGCCGCAAAGACCATATGTGCACTAGTAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006471 GO:0006807 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016192 GO:0019538 GO:0033036 GO:0034613 GO:0036211 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04072 ko04144 ko05110 ko05134 map04072 map04144 map05110 map05134

Pfam Domains

Protein Families

Arf

Protein Analysis

433

Amino Acids

47.65

Weight (kDa)

6.75

Isoelectric Point (pI)

34.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pectate_lyase_4	PF00544	156 - 365	7.2e-22	Pectate lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0011642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10630 AT1G10630
fragaria_vesca	FvH4_4g21070 FvH4_4g21070 FvH4_6g08050 FvH4_6g08050
prunus_persica	Prupe.6G308600_v2.0.a1 Prupe.6G308600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0457721
rosa_laevigata	RLG00000025191
rosa_multiflora	Rmu_sc0007395.1_g000001 Rmu_sc0028418.1_g000001
rosa_roxburghii	Rroxscaffold_6G00421540
rosa_rugosa	Rorug03G0022800 Rorug03G0022900 Rorug03G0023000
rosa_samantha	Rh3AG083600 Rh3BG086100 Rh3DG087000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1277
AasI	GACNNNNNNGTC	1 cut(s)	374
Acc36I	ACCTGC	1 cut(s)	1277
Acc65I	GGTACC	1 cut(s)	1044
AccB1I	GGYRCC	2 cut(s)	1044, 1142
AccII	CGCG	3 cut(s)	287, 330, 510
AciI	CCGC	6 cut(s)	287, 328, 508, 510, 911, 1273
AclWI	GGATC	2 cut(s)	205, 451
AcoI	YGGCCR	1 cut(s)	505
AcsI	RAATTY	1 cut(s)	226
AfaI	GTAC	2 cut(s)	266, 1046
AfiI	CCNNNNNNNGG	3 cut(s)	624, 886, 964
AflIII	ACRYGT	1 cut(s)	699
AgsI	TTSAA	1 cut(s)	1138
AhlI	ACTAGT	1 cut(s)	1292
AjnI	CCWGG	1 cut(s)	192
AloI	GAACNNNNNNTCC	2 cut(s)	504, 536
AluBI	AGCT	8 cut(s)	181, 463, 475, 489, 630, 1175, 1206, 1217
AluI	AGCT	8 cut(s)	181, 463, 475, 489, 630, 1175, 1206, 1217
Alw21I	GWGCWC	3 cut(s)	632, 1264, 1292
Alw26I	GTCTC	2 cut(s)	151, 840
Alw44I	GTGCAC	2 cut(s)	1260, 1288
AlwI	GGATC	2 cut(s)	205, 451
Ama87I	CYCGRG	2 cut(s)	125, 1201
AoxI	GGCC	7 cut(s)	325, 505, 580, 739, 759, 1185, 1197
ApaLI	GTGCAC	2 cut(s)	1260, 1288
ApeKI	GCWGC	1 cut(s)	1253
ApoI	RAATTY	1 cut(s)	226
Asp718I	GGTACC	1 cut(s)	1044
AspLEI	GCGC	3 cut(s)	296, 339, 734
AspS9I	GGNCC	1 cut(s)	393
AsuC2I	CCSGG	2 cut(s)	223, 1049
AsuHPI	GGTGA	7 cut(s)	466, 624, 634, 680, 715, 952, 1258
AvaI	CYCGRG	2 cut(s)	125, 1201
AvaII	GGWCC	1 cut(s)	393
BaeGI	GKGCMC	2 cut(s)	1264, 1292
BanI	GGYRCC	2 cut(s)	1044, 1142
BanII	GRGCYC	1 cut(s)	632
BauI	CACGAG	1 cut(s)	743
Bbv12I	GWGCWC	3 cut(s)	632, 1264, 1292
BbvI	GCAGC	1 cut(s)	1240
BccI	CCATC	3 cut(s)	239, 986, 1010
BceAI	ACGGC	3 cut(s)	359, 520, 754
BcgI	CGANNNNNNTGC	2 cut(s)	116, 150
BciT130I	CCWGG	1 cut(s)	194
BclI	TGATCA	1 cut(s)	709
BcnI	CCSGG	2 cut(s)	223, 1049
BcoDI	GTCTC	2 cut(s)	151, 840
BcuI	ACTAGT	1 cut(s)	1292
BfaI	CTAG	3 cut(s)	360, 1293, 1300
BfmI	CTRYAG	2 cut(s)	768, 952
BfoI	RGCGCY	1 cut(s)	340
BfuAI	ACCTGC	1 cut(s)	1277
BisI	GCNGC	5 cut(s)	328, 508, 911, 1254, 1273
BlsI	GCNGC	5 cut(s)	329, 509, 912, 1255, 1274
Bme1390I	CCNGG	3 cut(s)	194, 223, 1049
Bme18I	GGWCC	1 cut(s)	393
BmeT110I	CYCGRG	2 cut(s)	125, 1201
BmgT120I	GGNCC	1 cut(s)	393
BmiI	GGNNCC	7 cut(s)	394, 395, 514, 691, 1046, 1144, 1240
BmrFI	CCNGG	3 cut(s)	194, 223, 1049
BmsI	GCATC	5 cut(s)	165, 177, 361, 661, 888
BpmI	CTGGAG	4 cut(s)	176, 676, 864, 1182
Bpu10I	CCTNAGC	2 cut(s)	182, 1194
BpuEI	CTTGAG	2 cut(s)	172, 449
BpuMI	CCSGG	2 cut(s)	223, 1049
BsaI	GGTCTC	1 cut(s)	151
BsaJI	CCNNGG	7 cut(s)	126, 141, 193, 508, 618, 958, 1230
BsaWI	WCCGGW	1 cut(s)	1169
BsaXI	ACNNNNNCTCC	4 cut(s)	504, 534, 567, 597
Bsc4I	CCNNNNNNNGG	3 cut(s)	624, 886, 964
Bse1I	ACTGG	2 cut(s)	847, 1109
Bse3DI	GCAATG	2 cut(s)	81, 525
BseBI	CCWGG	1 cut(s)	194
BseDI	CCNNGG	7 cut(s)	126, 141, 193, 508, 618, 958, 1230
BseGI	GGATG	4 cut(s)	156, 200, 588, 754
BseLI	CCNNNNNNNGG	3 cut(s)	624, 886, 964
BseMI	GCAATG	2 cut(s)	81, 525
BseMII	CTCAG	2 cut(s)	196, 1133
BseNI	ACTGG	2 cut(s)	847, 1109
BseRI	GAGGAG	1 cut(s)	640
BseSI	GKGCMC	2 cut(s)	1264, 1292
BseX3I	CGGCCG	1 cut(s)	505
BseXI	GCAGC	1 cut(s)	1240
Bsh1236I	CGCG	3 cut(s)	287, 330, 510
Bsh1285I	CGRYCG	1 cut(s)	508
BshFI	GGCC	7 cut(s)	327, 507, 582, 741, 761, 1187, 1199
BshNI	GGYRCC	2 cut(s)	1044, 1142
BsiEI	CGRYCG	1 cut(s)	508
BsiHKAI	GWGCWC	3 cut(s)	632, 1264, 1292
BsiHKCI	CYCGRG	2 cut(s)	125, 1201
BsiSI	CCGG	3 cut(s)	222, 1049, 1170
BslFI	GGGAC	2 cut(s)	406, 1097
BslI	CCNNNNNNNGG	3 cut(s)	624, 886, 964
BsmAI	GTCTC	2 cut(s)	151, 840
BsmFI	GGGAC	2 cut(s)	406, 1097
BsmI	GAATGC	1 cut(s)	619
BsnI	GGCC	7 cut(s)	327, 507, 582, 741, 761, 1187, 1199
Bso31I	GGTCTC	1 cut(s)	151
BsoBI	CYCGRG	2 cut(s)	125, 1201
Bsp1286I	GDGCHC	3 cut(s)	632, 1264, 1292
Bsp143I	GATC	4 cut(s)	197, 456, 709, 1033
Bsp19I	CCATGG	3 cut(s)	141, 618, 1230
BspACI	CCGC	6 cut(s)	287, 328, 508, 510, 911, 1273
BspANI	GGCC	7 cut(s)	327, 507, 582, 741, 761, 1187, 1199
BspCNI	CTCAG	2 cut(s)	195, 1132
BspFNI	CGCG	3 cut(s)	287, 330, 510
BspHI	TCATGA	1 cut(s)	480
BspLI	GGNNCC	7 cut(s)	394, 395, 514, 691, 1046, 1144, 1240
BspMAI	CTGCAG	1 cut(s)	772
BspMI	ACCTGC	1 cut(s)	1277
BspPI	GGATC	2 cut(s)	205, 451
BspT107I	GGYRCC	2 cut(s)	1044, 1142
BspTNI	GGTCTC	1 cut(s)	151
BsrDI	GCAATG	2 cut(s)	81, 525
BsrI	ACTGG	2 cut(s)	847, 1109
BssECI	CCNNGG	7 cut(s)	126, 141, 193, 508, 618, 958, 1230
BssMI	GATC	4 cut(s)	197, 456, 709, 1033
BssSI	CACGAG	1 cut(s)	743
BssT1I	CCWWGG	3 cut(s)	141, 618, 1230
Bst2BI	CACGAG	1 cut(s)	743
Bst2UI	CCWGG	1 cut(s)	194
Bst4CI	ACNGT	8 cut(s)	112, 242, 636, 668, 868, 926, 962, 1010
Bst6I	CTCTTC	1 cut(s)	71
BstAPI	GCANNNNNTGC	1 cut(s)	907
BstC8I	GCNNGC	2 cut(s)	541, 602
BstDEI	CTNAG	4 cut(s)	182, 1119, 1194, 1218
BstDSI	CCRYGG	5 cut(s)	141, 508, 618, 958, 1230
BstEII	GGTNACC	1 cut(s)	1063
BstF5I	GGATG	4 cut(s)	156, 200, 588, 754
BstFNI	CGCG	3 cut(s)	287, 330, 510
BstH2I	RGCGCY	1 cut(s)	340
BstHHI	GCGC	3 cut(s)	296, 339, 734
BstKTI	GATC	4 cut(s)	200, 459, 712, 1036
BstMAI	GTCTC	2 cut(s)	151, 840
BstMBI	GATC	4 cut(s)	197, 456, 709, 1033
BstMCI	CGRYCG	1 cut(s)	508
BstNI	CCWGG	1 cut(s)	194
BstNSI	RCATGY	2 cut(s)	543, 859
BstPI	GGTNACC	1 cut(s)	1063
BstSCI	CCNGG	3 cut(s)	192, 221, 1047
BstSFI	CTRYAG	2 cut(s)	768, 952
BstSLI	GKGCMC	2 cut(s)	1264, 1292
BstUI	CGCG	3 cut(s)	287, 330, 510
BstV1I	GCAGC	1 cut(s)	1240
BstZI	CGGCCG	1 cut(s)	505
BsuRI	GGCC	7 cut(s)	327, 507, 582, 741, 761, 1187, 1199
BtgI	CCRYGG	5 cut(s)	141, 508, 618, 958, 1230
BtgZI	GCGATG	1 cut(s)	262
BtsCI	GGATG	4 cut(s)	156, 200, 588, 754
BtsI	GCAGTG	1 cut(s)	24
BtsIMutI	CAGTG	3 cut(s)	24, 351, 1015
BveI	ACCTGC	1 cut(s)	1277
Cac8I	GCNNGC	2 cut(s)	541, 602
CciI	TCATGA	1 cut(s)	480
CfoI	GCGC	3 cut(s)	296, 339, 734
Cfr13I	GGNCC	1 cut(s)	393
Cfr42I	CCGCGG	1 cut(s)	511
Csp6I	GTAC	2 cut(s)	265, 1045
CviQI	GTAC	2 cut(s)	265, 1045
DdeI	CTNAG	4 cut(s)	182, 1119, 1194, 1218
DpnI	GATC	4 cut(s)	199, 458, 711, 1035
DpnII	GATC	4 cut(s)	197, 456, 709, 1033
DrdI	GACNNNNNNGTC	1 cut(s)	374
DseDI	GACNNNNNNGTC	1 cut(s)	374
EaeI	YGGCCR	1 cut(s)	505
EagI	CGGCCG	1 cut(s)	505
Eam1104I	CTCTTC	1 cut(s)	71
EarI	CTCTTC	1 cut(s)	71
Ecl136II	GAGCTC	1 cut(s)	630
EclXI	CGGCCG	1 cut(s)	505
Eco130I	CCWWGG	3 cut(s)	141, 618, 1230
Eco147I	AGGCCT	2 cut(s)	1187, 1199
Eco24I	GRGCYC	1 cut(s)	632
Eco31I	GGTCTC	1 cut(s)	151
Eco47I	GGWCC	1 cut(s)	393
Eco52I	CGGCCG	1 cut(s)	505
Eco53kI	GAGCTC	1 cut(s)	630
Eco88I	CYCGRG	2 cut(s)	125, 1201
Eco91I	GGTNACC	1 cut(s)	1063
EcoICRI	GAGCTC	1 cut(s)	630
EcoO109I	RGGNCCY	1 cut(s)	393
EcoO65I	GGTNACC	1 cut(s)	1063
EcoRI	GAATTC	1 cut(s)	226
EcoRII	CCWGG	1 cut(s)	192
EcoT14I	CCWWGG	3 cut(s)	141, 618, 1230
EcoT22I	ATGCAT	1 cut(s)	545
EcoT38I	GRGCYC	1 cut(s)	632
ErhI	CCWWGG	3 cut(s)	141, 618, 1230
FaqI	GGGAC	2 cut(s)	406, 1097
FauNDI	CATATG	1 cut(s)	1284
FbaI	TGATCA	1 cut(s)	709
Fnu4HI	GCNGC	5 cut(s)	328, 508, 911, 1254, 1273
FokI	GGATG	4 cut(s)	143, 187, 575, 761
FriOI	GRGCYC	1 cut(s)	632
Fsp4HI	GCNGC	5 cut(s)	328, 508, 911, 1254, 1273
FspBI	CTAG	3 cut(s)	360, 1293, 1300
GlaI	GCGC	3 cut(s)	295, 338, 733
GluI	GCNGC	5 cut(s)	328, 508, 911, 1254, 1273
GsuI	CTGGAG	4 cut(s)	176, 676, 864, 1182
HaeII	RGCGCY	1 cut(s)	340
HaeIII	GGCC	7 cut(s)	327, 507, 582, 741, 761, 1187, 1199
HapII	CCGG	3 cut(s)	222, 1049, 1170
HhaI	GCGC	3 cut(s)	296, 339, 734
Hin6I	GCGC	3 cut(s)	294, 337, 732
HinP1I	GCGC	3 cut(s)	294, 337, 732
HincII	GTYRAC	1 cut(s)	379
HindII	GTYRAC	1 cut(s)	379
HinfI	GANTC	4 cut(s)	254, 356, 833, 1052
HpaII	CCGG	3 cut(s)	222, 1049, 1170
HphI	GGTGA	7 cut(s)	466, 624, 634, 680, 715, 952, 1258
Hpy166II	GTNNAC	5 cut(s)	379, 523, 943, 1262, 1290
Hpy188I	TCNGA	4 cut(s)	276, 421, 1038, 1183
Hpy188III	TCNNGA	5 cut(s)	391, 481, 562, 1135, 1161
Hpy8I	GTNNAC	5 cut(s)	379, 523, 943, 1262, 1290
Hpy99I	CGWCG	4 cut(s)	239, 335, 371, 740
HpyAV	CCTTC	3 cut(s)	407, 884, 1007
HpyCH4III	ACNGT	8 cut(s)	112, 242, 636, 668, 868, 926, 962, 1010
HpyCH4IV	ACGT	2 cut(s)	558, 699
HpyF3I	CTNAG	4 cut(s)	182, 1119, 1194, 1218
HpySE526I	ACGT	2 cut(s)	558, 699
HspAI	GCGC	3 cut(s)	294, 337, 732
KflI	GGGWCCC	1 cut(s)	393
KpnI	GGTACC	1 cut(s)	1048
Ksp22I	TGATCA	1 cut(s)	709
KspI	CCGCGG	1 cut(s)	511
Kzo9I	GATC	4 cut(s)	197, 456, 709, 1033
LmnI	GCTCC	7 cut(s)	472, 512, 627, 695, 1163, 1172, 1238
Lsp1109I	GCAGC	1 cut(s)	1240
LweI	GCATC	5 cut(s)	165, 177, 361, 661, 888
MaeI	CTAG	3 cut(s)	360, 1293, 1300
MaeII	ACGT	2 cut(s)	558, 699
MalI	GATC	4 cut(s)	199, 458, 711, 1035
MboI	GATC	4 cut(s)	197, 456, 709, 1033
MboII	GAAGA	3 cut(s)	58, 1111, 1218
MfeI	CAATTG	2 cut(s)	259, 318
MhlI	GDGCHC	3 cut(s)	632, 1264, 1292
MluCI	AATT	5 cut(s)	226, 259, 318, 787, 1108
MlyI	GAGTC	3 cut(s)	248, 350, 827
MmeI	TCCRAC	3 cut(s)	629, 1071, 1216
Mph1103I	ATGCAT	1 cut(s)	545
MseI	TTAA	3 cut(s)	24, 33, 384
MslI	CAYNNNNRTG	5 cut(s)	211, 591, 804, 807, 860
MspA1I	CMGCKG	1 cut(s)	510
MspI	CCGG	3 cut(s)	222, 1049, 1170
MspR9I	CCNGG	3 cut(s)	194, 223, 1049
MunI	CAATTG	2 cut(s)	259, 318
Mva1269I	GAATGC	1 cut(s)	619
MvaI	CCWGG	1 cut(s)	194
MvnI	CGCG	3 cut(s)	287, 330, 510
NciI	CCSGG	2 cut(s)	223, 1049
NcoI	CCATGG	3 cut(s)	141, 618, 1230
NdeI	CATATG	1 cut(s)	1284
NdeII	GATC	4 cut(s)	197, 456, 709, 1033
NlaIV	GGNNCC	7 cut(s)	394, 395, 514, 691, 1046, 1144, 1240
NmuCI	GTSAC	8 cut(s)	251, 349, 362, 446, 559, 636, 824, 862
NsiI	ATGCAT	1 cut(s)	545
NspI	RCATGY	2 cut(s)	543, 859
PaeI	GCATGC	1 cut(s)	543
PaeR7I	CTCGAG	1 cut(s)	1201
PagI	TCATGA	1 cut(s)	480
PaqCI	CACCTGC	1 cut(s)	1277
PceI	AGGCCT	2 cut(s)	1187, 1199
PcsI	WCGNNNNNNNCGW	1 cut(s)	372
PctI	GAATGC	1 cut(s)	619
PfeI	GAWTC	1 cut(s)	1052
PkrI	GCNGC	5 cut(s)	329, 509, 912, 1255, 1274
PleI	GAGTC	3 cut(s)	248, 350, 827
PpsI	GAGTC	3 cut(s)	248, 350, 827
PpuMI	RGGWCCY	1 cut(s)	393
Psp124BI	GAGCTC	1 cut(s)	632
Psp5II	RGGWCCY	1 cut(s)	393
Psp6I	CCWGG	1 cut(s)	192
PspEI	GGTNACC	1 cut(s)	1063
PspGI	CCWGG	1 cut(s)	192
PspN4I	GGNNCC	7 cut(s)	394, 395, 514, 691, 1046, 1144, 1240
PspPI	GGNCC	1 cut(s)	393
PspPPI	RGGWCCY	1 cut(s)	393
PspXI	VCTCGAGB	1 cut(s)	1201
PsrI	GAACNNNNNNTAC	2 cut(s)	935, 967
PstI	CTGCAG	1 cut(s)	772
RsaI	GTAC	2 cut(s)	266, 1046
RsaNI	GTAC	2 cut(s)	265, 1045
RseI	CAYNNNNRTG	5 cut(s)	211, 591, 804, 807, 860
SacI	GAGCTC	1 cut(s)	632
SacII	CCGCGG	1 cut(s)	511
SaqAI	TTAA	3 cut(s)	24, 33, 384
SatI	GCNGC	5 cut(s)	328, 508, 911, 1254, 1273
Sau3AI	GATC	4 cut(s)	197, 456, 709, 1033
Sau96I	GGNCC	1 cut(s)	393
SchI	GAGTC	3 cut(s)	248, 350, 827
ScrFI	CCNGG	3 cut(s)	194, 223, 1049
SduI	GDGCHC	3 cut(s)	632, 1264, 1292
SfaNI	GCATC	5 cut(s)	165, 177, 361, 661, 888
SfcI	CTRYAG	2 cut(s)	768, 952
Sfr274I	CTCGAG	1 cut(s)	1201
Sfr303I	CCGCGG	1 cut(s)	511
SgrBI	CCGCGG	1 cut(s)	511
SinI	GGWCC	1 cut(s)	393
SlaI	CTCGAG	1 cut(s)	1201
SmiMI	CAYNNNNRTG	5 cut(s)	211, 591, 804, 807, 860
SmlI	CTYRAG	3 cut(s)	151, 464, 1201
SmoI	CTYRAG	3 cut(s)	151, 464, 1201
SpeI	ACTAGT	1 cut(s)	1292
SphI	GCATGC	1 cut(s)	543
Sse9I	AATT	5 cut(s)	226, 259, 318, 787, 1108
SseBI	AGGCCT	2 cut(s)	1187, 1199
SsiI	CCGC	6 cut(s)	287, 328, 508, 510, 911, 1273
SspMI	CTAG	3 cut(s)	360, 1293, 1300
SstI	GAGCTC	1 cut(s)	632
StuI	AGGCCT	2 cut(s)	1187, 1199
StyD4I	CCNGG	3 cut(s)	192, 221, 1047
StyI	CCWWGG	3 cut(s)	141, 618, 1230
TaaI	ACNGT	8 cut(s)	112, 242, 636, 668, 868, 926, 962, 1010
TaiI	ACGT	2 cut(s)	561, 702
TaqI	TCGA	6 cut(s)	114, 171, 234, 680, 1055, 1202
TasI	AATT	5 cut(s)	226, 259, 318, 787, 1108
TauI	GCSGC	4 cut(s)	330, 510, 913, 1275
TfiI	GAWTC	1 cut(s)	1052
Tru1I	TTAA	3 cut(s)	24, 33, 384
Tru9I	TTAA	3 cut(s)	24, 33, 384
TscAI	CASTG	3 cut(s)	24, 358, 1015
TseFI	GTSAC	8 cut(s)	251, 349, 362, 446, 559, 636, 824, 862
TseI	GCWGC	1 cut(s)	1253
Tsp45I	GTSAC	8 cut(s)	251, 349, 362, 446, 559, 636, 824, 862
TspDTI	ATGAA	3 cut(s)	70, 497, 549
TspGWI	ACGGA	1 cut(s)	1146
TspRI	CASTG	3 cut(s)	24, 358, 1015
VneI	GTGCAC	2 cut(s)	1260, 1288
VpaK11BI	GGWCC	1 cut(s)	393
XapI	RAATTY	1 cut(s)	226
XceI	RCATGY	2 cut(s)	543, 859
XhoI	CTCGAG	1 cut(s)	1201
XspI	CTAG	3 cut(s)	360, 1293, 1300
Zsp2I	ATGCAT	1 cut(s)	545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.