Prupe.6G348100_v2.0.a1

Methyltransferase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0007209
Physical Location & Seq
Forward (+)
29748529 .. 29751403
2875 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G348100.4

Sequence Viewer

Length: 969 bp
ATGAGAAAAGCAGAGTACTTTAGCAAGGACTTCGACTGGGATGAGCTAAGAGTTCAGGTGGAAAACGACCCGTCGTTCAGCTACCACTTGCTCCCCTTCCAACCCAACCCCATTTCAATTTCACTCGCAGATGAAGTCCATTATGCTGCTGCTGGGTCTCATGCATGGAACGCATTTCACCACCGGCATGCCTCTGGCAAGTTCTTCAAGGAAAGACGATATCTGTTAGAAGAATTCCCTGAACTAGTCAATTGCAAAGAGAATTCTAAGGTTTTGGAGGTGGGATGTGGTAATGGCAGCACTGTTCTTCCTATATTACGTGGCAATGAAAACATCATTGTTTATGCTTGCGATTGCAGCAATGAGGCCCTGGAGAGGGTTAAGGAGACGGTATATGCCTCTAACAAAGTATCTTTCGAACATCGTTTTCATCCATTTTGTTGTGATTTTTCTGTAACCGTGTTTCCAACATGGTTGGCCTGCAATCCTTGTCAAGAAAATATTGCACAAACACAGCAGCTGTGCTTTTCAGATGGTAGAGGGAAAAGTCAAAAAAATCTTAATGATTCATATTCATTAAGTGAAAGTAGATGTTGCATTGGTGGGGTTGATTTTGTTACCTTGATATTCACACTGTCAGCATTACCACTTCATAGGATGCCAGAGTCCATCAAGGAGTGTTTTTCTGTCCTGAAACCTGGAGGCCTGCTGTTCTTTAGGGATTATGGCCTCTATGATATGTCTATGCTTCGATTTGAGATAGACAAAAGAGTGGGATTTAGGGAGTATATGCGATCAGATGGAACCCGCTCTTATTTCTTCTGTTTAGATACTGTGAGGAATCTATTTGTGGGTGCAGGCTTCACTGAGCTTGAGCTTGAATATTGCTGCGTTAAGTCGGTCAATCGTCGAAATGGGAAGAGCATGCGAAGGGTGTGGGTTCATGGAAAGTTCCAGAAGCCTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_12 Methyltransf_23

Protein Analysis

323

Amino Acids

37.11

Weight (kDa)

7.1

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 810
AciI CCGC 1 cut(s) 808
AcsI RAATTY 2 cut(s) 233, 262
AfaI GTAC 1 cut(s) 17
AfiI CCNNNNNNNGG 2 cut(s) 375, 376
AgsI TTSAA 3 cut(s) 117, 208, 881
AhlI ACTAGT 1 cut(s) 244
AjnI CCWGG 2 cut(s) 369, 697
AluBI AGCT 5 cut(s) 46, 81, 520, 871, 877
AluI AGCT 5 cut(s) 46, 81, 520, 871, 877
Alw26I GTCTC 2 cut(s) 162, 380
AlwNI CAGNNNCTG 1 cut(s) 520
AoxI GGCC 4 cut(s) 366, 477, 703, 727
ApeKI GCWGC 6 cut(s) 146, 149, 297, 357, 517, 888
ApoI RAATTY 2 cut(s) 233, 262
AspS9I GGNCC 1 cut(s) 367
AsuHPI GGTGA 1 cut(s) 170
AsuII TTCGAA 1 cut(s) 417
BbvI GCAGC 6 cut(s) 133, 136, 309, 369, 529, 875
BccI CCATC 3 cut(s) 527, 677, 794
BcgI CGANNNNNNTGC 2 cut(s) 13, 47
BciT130I CCWGG 2 cut(s) 371, 699
BcoDI GTCTC 2 cut(s) 162, 380
BcuI ACTAGT 1 cut(s) 244
BfaI CTAG 1 cut(s) 245
BisI GCNGC 6 cut(s) 147, 150, 298, 358, 518, 889
BlsI GCNGC 6 cut(s) 148, 151, 299, 359, 519, 890
BmcAI AGTACT 1 cut(s) 17
Bme1390I CCNGG 2 cut(s) 371, 699
BmgT120I GGNCC 1 cut(s) 367
BmiI GGNNCC 1 cut(s) 805
BmrFI CCNGG 2 cut(s) 371, 699
BmrI ACTGGG 1 cut(s) 46
BmsI GCATC 1 cut(s) 648
BmuI ACTGGG 1 cut(s) 46
BpmI CTGGAG 2 cut(s) 392, 720
Bpu14I TTCGAA 1 cut(s) 417
BpuEI CTTGAG 1 cut(s) 893
BsaAI YACGTR 1 cut(s) 320
BsaI GGTCTC 1 cut(s) 162
BsaJI CCNNGG 1 cut(s) 369
Bsc4I CCNNNNNNNGG 2 cut(s) 375, 376
Bse118I RCCGGY 1 cut(s) 183
Bse1I ACTGG 1 cut(s) 41
Bse3DI GCAATG 2 cut(s) 331, 367
BseBI CCWGG 2 cut(s) 371, 699
BseDI CCNNGG 1 cut(s) 369
BseGI GGATG 4 cut(s) 46, 290, 430, 663
BseLI CCNNNNNNNGG 2 cut(s) 375, 376
BseMI GCAATG 2 cut(s) 331, 367
BseMII CTCAG 1 cut(s) 858
BseNI ACTGG 1 cut(s) 41
BseXI GCAGC 6 cut(s) 133, 136, 309, 369, 529, 875
BseYI CCCAGC 1 cut(s) 152
BsgI GTGCAG 1 cut(s) 876
BshFI GGCC 4 cut(s) 368, 479, 705, 729
BsiSI CCGG 1 cut(s) 184
BslI CCNNNNNNNGG 2 cut(s) 375, 376
BsmAI GTCTC 2 cut(s) 162, 380
BsmBI CGTCTC 1 cut(s) 380
BsnI GGCC 4 cut(s) 368, 479, 705, 729
Bso31I GGTCTC 1 cut(s) 162
Bsp119I TTCGAA 1 cut(s) 417
Bsp143I GATC 1 cut(s) 794
BspACI CCGC 1 cut(s) 808
BspANI GGCC 4 cut(s) 368, 479, 705, 729
BspCNI CTCAG 1 cut(s) 859
BspLI GGNNCC 1 cut(s) 805
BspQI GCTCTTC 1 cut(s) 914
BspT104I TTCGAA 1 cut(s) 417
BspTNI GGTCTC 1 cut(s) 162
BsrBI CCGCTC 1 cut(s) 810
BsrDI GCAATG 2 cut(s) 331, 367
BsrFI RCCGGY 1 cut(s) 183
BsrI ACTGG 1 cut(s) 41
BssAI RCCGGY 1 cut(s) 183
BssECI CCNNGG 1 cut(s) 369
BssMI GATC 1 cut(s) 794
Bst2UI CCWGG 2 cut(s) 371, 699
Bst4CI ACNGT 5 cut(s) 304, 391, 460, 636, 835
Bst6I CTCTTC 1 cut(s) 914
BstBAI YACGTR 1 cut(s) 320
BstBI TTCGAA 1 cut(s) 417
BstC8I GCNNGC 6 cut(s) 189, 349, 481, 707, 859, 926
BstDEI CTNAG 3 cut(s) 47, 267, 867
BstF5I GGATG 4 cut(s) 46, 290, 430, 663
BstKTI GATC 1 cut(s) 797
BstMAI GTCTC 2 cut(s) 162, 380
BstMBI GATC 1 cut(s) 794
BstMWI GCNNNNNNNGC 2 cut(s) 170, 357
BstNI CCWGG 2 cut(s) 371, 699
BstNSI RCATGY 2 cut(s) 191, 928
BstSCI CCNGG 2 cut(s) 369, 697
BstV1I GCAGC 6 cut(s) 133, 136, 309, 369, 529, 875
BsuRI GGCC 4 cut(s) 368, 479, 705, 729
BtsCI GGATG 4 cut(s) 46, 290, 430, 663
BtsIMutI CAGTG 3 cut(s) 300, 632, 864
Cac8I GCNNGC 6 cut(s) 189, 349, 481, 707, 859, 926
CaiI CAGNNNCTG 1 cut(s) 520
Cfr10I RCCGGY 1 cut(s) 183
Cfr13I GGNCC 1 cut(s) 367
Csp6I GTAC 1 cut(s) 16
CviAII CATG 6 cut(s) 161, 165, 188, 471, 925, 944
CviQI GTAC 1 cut(s) 16
DdeI CTNAG 3 cut(s) 47, 267, 867
DpnI GATC 1 cut(s) 796
DpnII GATC 1 cut(s) 794
Eam1104I CTCTTC 1 cut(s) 914
EarI CTCTTC 1 cut(s) 914
Eco147I AGGCCT 1 cut(s) 705
Eco31I GGTCTC 1 cut(s) 162
Eco32I GATATC 1 cut(s) 221
EcoO109I RGGNCCY 1 cut(s) 367
EcoRI GAATTC 2 cut(s) 233, 262
EcoRII CCWGG 2 cut(s) 369, 697
EcoRV GATATC 1 cut(s) 221
EcoT22I ATGCAT 1 cut(s) 166
Esp3I CGTCTC 1 cut(s) 380
FaeI CATG 6 cut(s) 164, 168, 191, 474, 928, 947
FatI CATG 6 cut(s) 160, 164, 187, 470, 924, 943
FauI CCCGC 1 cut(s) 815
Fnu4HI GCNGC 6 cut(s) 147, 150, 298, 358, 518, 889
FokI GGATG 4 cut(s) 53, 297, 417, 670
Fsp4HI GCNGC 6 cut(s) 147, 150, 298, 358, 518, 889
FspBI CTAG 1 cut(s) 245
GluI GCNGC 6 cut(s) 147, 150, 298, 358, 518, 889
GsaI CCCAGC 1 cut(s) 156
GsuI CTGGAG 2 cut(s) 392, 720
HaeIII GGCC 4 cut(s) 368, 479, 705, 729
HapII CCGG 1 cut(s) 184
Hin1II CATG 6 cut(s) 164, 168, 191, 474, 928, 947
HinfI GANTC 3 cut(s) 566, 665, 841
HpaII CCGG 1 cut(s) 184
HphI GGTGA 1 cut(s) 170
Hpy188I TCNGA 2 cut(s) 532, 799
Hpy188III TCNNGA 3 cut(s) 494, 691, 955
Hpy99I CGWCG 2 cut(s) 76, 912
HpyAV CCTTC 2 cut(s) 106, 924
HpyCH4III ACNGT 5 cut(s) 304, 391, 460, 636, 835
HpyCH4IV ACGT 1 cut(s) 319
HpyCH4V TGCA 7 cut(s) 164, 255, 357, 483, 506, 597, 857
HpyF10VI GCNNNNNNNGC 2 cut(s) 170, 357
HpyF3I CTNAG 3 cut(s) 47, 267, 867
HpySE526I ACGT 1 cut(s) 319
Hsp92II CATG 6 cut(s) 164, 168, 191, 474, 928, 947
Kzo9I GATC 1 cut(s) 794
LguI GCTCTTC 1 cut(s) 914
LmnI GCTCC 1 cut(s) 96
Lsp1109I GCAGC 6 cut(s) 133, 136, 309, 369, 529, 875
LweI GCATC 1 cut(s) 648
MaeI CTAG 1 cut(s) 245
MaeII ACGT 1 cut(s) 319
MaeIII GTNAC 2 cut(s) 454, 616
MalI GATC 1 cut(s) 796
MbiI CCGCTC 1 cut(s) 810
MboI GATC 1 cut(s) 794
MboII GAAGA 5 cut(s) 196, 242, 299, 811, 931
MfeI CAATTG 1 cut(s) 250
MluCI AATT 4 cut(s) 117, 233, 250, 262
MlyI GAGTC 1 cut(s) 674
MmeI TCCRAC 2 cut(s) 124, 491
MnlI CCTC 9 cut(s) 202, 271, 358, 369, 409, 533, 695, 740, 831
Mph1103I ATGCAT 1 cut(s) 166
MseI TTAA 4 cut(s) 381, 561, 578, 894
MslI CAYNNNNRTG 1 cut(s) 186
MspA1I CMGCKG 1 cut(s) 520
MspI CCGG 1 cut(s) 184
MspR9I CCNGG 2 cut(s) 371, 699
MunI CAATTG 1 cut(s) 250
MvaI CCWGG 2 cut(s) 371, 699
MwoI GCNNNNNNNGC 2 cut(s) 170, 357
NdeII GATC 1 cut(s) 794
NlaIII CATG 6 cut(s) 164, 168, 191, 474, 928, 947
NlaIV GGNNCC 1 cut(s) 805
NsiI ATGCAT 1 cut(s) 166
NspI RCATGY 2 cut(s) 191, 928
NspV TTCGAA 1 cut(s) 417
PaeI GCATGC 2 cut(s) 191, 928
PceI AGGCCT 1 cut(s) 705
PciSI GCTCTTC 1 cut(s) 914
PfeI GAWTC 2 cut(s) 566, 841
PkrI GCNGC 6 cut(s) 148, 151, 299, 359, 519, 890
PleI GAGTC 1 cut(s) 673
PpsI GAGTC 1 cut(s) 673
Ppu21I YACGTR 1 cut(s) 320
Psp6I CCWGG 2 cut(s) 369, 697
PspFI CCCAGC 1 cut(s) 152
PspGI CCWGG 2 cut(s) 369, 697
PspN4I GGNNCC 1 cut(s) 805
PspPI GGNCC 1 cut(s) 367
PstNI CAGNNNCTG 1 cut(s) 520
PvuII CAGCTG 1 cut(s) 520
RsaI GTAC 1 cut(s) 17
RsaNI GTAC 1 cut(s) 16
RseI CAYNNNNRTG 1 cut(s) 186
SapI GCTCTTC 1 cut(s) 914
SaqAI TTAA 4 cut(s) 381, 561, 578, 894
SatI GCNGC 6 cut(s) 147, 150, 298, 358, 518, 889
Sau3AI GATC 1 cut(s) 794
Sau96I GGNCC 1 cut(s) 367
ScaI AGTACT 1 cut(s) 17
SchI GAGTC 1 cut(s) 674
ScrFI CCNGG 2 cut(s) 371, 699
SfaNI GCATC 1 cut(s) 648
SfuI TTCGAA 1 cut(s) 417
SmiMI CAYNNNNRTG 1 cut(s) 186
SmlI CTYRAG 1 cut(s) 872
SmoI CTYRAG 1 cut(s) 872
SpeI ACTAGT 1 cut(s) 244
SphI GCATGC 2 cut(s) 191, 928
Sse9I AATT 4 cut(s) 117, 233, 250, 262
SseBI AGGCCT 1 cut(s) 705
SsiI CCGC 1 cut(s) 808
SspI AATATT 2 cut(s) 502, 884
SspMI CTAG 1 cut(s) 245
StuI AGGCCT 1 cut(s) 705
StyD4I CCNGG 2 cut(s) 369, 697
TaaI ACNGT 5 cut(s) 304, 391, 460, 636, 835
TaiI ACGT 1 cut(s) 322
TaqI TCGA 4 cut(s) 33, 417, 751, 910
TaqII GACCGA 1 cut(s) 889
TasI AATT 4 cut(s) 117, 233, 250, 262
TatI WGTACW 1 cut(s) 15
TfiI GAWTC 2 cut(s) 566, 841
Tru1I TTAA 4 cut(s) 381, 561, 578, 894
Tru9I TTAA 4 cut(s) 381, 561, 578, 894
TscAI CASTG 3 cut(s) 307, 639, 871
TseI GCWGC 6 cut(s) 146, 149, 297, 357, 517, 888
TspDTI ATGAA 7 cut(s) 147, 342, 419, 558, 564, 641, 932
TspRI CASTG 3 cut(s) 307, 639, 871
XapI RAATTY 2 cut(s) 233, 262
XceI RCATGY 2 cut(s) 191, 928
XspI CTAG 1 cut(s) 245
ZrmI AGTACT 1 cut(s) 17
Zsp2I ATGCAT 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.