Prupe.6G362300_v2.0.a1

Uncharacterized conserved protein (DUF2358)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
30501423 .. 30504480
3058 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G362300.1

Sequence Viewer

Length: 948 bp
ATGAATGCCTCTGTTTCCATCATTCCCTCCTCCTCCTCTACCTCCTCCTGCTGCTGCACCACCACCCTCCTCCGCCGCCGCCGCCGCATATTTAAAACTACCTCACCTGCTAATAAATCTATTTTCACCTCCAACTCCAACTCCCATTTTACTACTGCCTCGTCCTCTCCCCATTACCACCGCCCTTTTTTACTGCGAGTAACAAATGATTCAAGTGGAAGCAGTGAATCTGAGAGAAGAGAGGCAGTAGATAGGATTGTGGATGGGATCGAGTTTGGGGAGCTGTGCAATGAGTTTGAGTGCATCAGTAGCCCCTCCATCGAGTCTACGGCTCGACAGCTTGTACGTGACATCCTTGAGCTCAGGGAAGGCAATCGCGCCCTCGGAACCTTTGCTGTTTCTGTTCAATACAAGGACCCAGTTAGAAGTTTTAGTGGTCGTGACAAATACAAGAGACCACTATGGATCACCACTGCCCTCCACAAACCCTCTGTGAGTGTACAAGAGATGAGCATGTTATCCACCAGTGTCCTAAGTATCAAGTGGACTGTCAAAGGGAAGCCCAAGAACATCGTTGGTGCTATAGCCTCGGATTTGATCATCCGAATTAATTCCCAATTCACTCTAAACCAGATAAGTGGGCAAGTGATTGAGCATGAAGAGTTTTGGGATTTATCGGCTTCCTCTGCCATTGGCAAGGCATATTTCTGGACCTCGCGTCGTCTCTTTGCTACCATTGAGGGTGGCAAAGACTTGGCTGATCTTGTCAAAACCATTTCCAACCAGTTTCCCAGAGAAAAACAGAATATGGAGATATATCCTGACCCTTCTGGTGACCCAACTAAGTTCTTTCAAAGGGATGACGGTTTCCAAAGAGATGTATACCAAATTGCTCTGTTTCTGGCACTCGTCTATTTTGTTGTACAGCTTTTGAGGACAACCTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

316

Amino Acids

35.43

Weight (kDa)

9.19

Isoelectric Point (pI)

56.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016218)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65230
fragaria_vesca FvH4_6g00410
malus_domestica MD04G1245900.v1.1 MD12G1264100.v1.1
prunus_persica Prupe.6G362300_v2.0.a1
pyrus_communis pycom04g21680
rosa_chinensis RchiOBHm_Chr3g0447741
rosa_laevigata RLG00000025974
rosa_multiflora Rmu_ssc0000391.1_g000014
rosa_roxburghii Rroxscaffold_6G00425940
rosa_rugosa Rorug02G0605200 Rorug02G0605200
rosa_samantha Rh3AG004900 Rh3CG004900
rosa_wichuraiana Rw3G000360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 115
Acc36I ACCTGC 1 cut(s) 115
AccI GTMKAC 2 cut(s) 326, 882
AccII CGCG 2 cut(s) 378, 718
AciI CCGC 6 cut(s) 73, 76, 79, 82, 85, 181
AclWI GGATC 2 cut(s) 275, 473
AfaI GTAC 3 cut(s) 345, 501, 924
AgsI TTSAA 3 cut(s) 213, 407, 854
AhdI GACNNNNNGTC 1 cut(s) 717
AluBI AGCT 4 cut(s) 283, 340, 361, 928
AluI AGCT 4 cut(s) 283, 340, 361, 928
Alw21I GWGCWC 1 cut(s) 363
Alw26I GTCTC 2 cut(s) 448, 728
AlwI GGATC 2 cut(s) 275, 473
ApeKI GCWGC 2 cut(s) 51, 54
AseI ATTAAT 1 cut(s) 609
Asp700I GAANNNNTTC 1 cut(s) 610
AspLEI GCGC 1 cut(s) 380
AspS9I GGNCC 2 cut(s) 415, 711
AsuHPI GGTGA 4 cut(s) 96, 118, 460, 845
AvaII GGWCC 2 cut(s) 415, 711
BanII GRGCYC 1 cut(s) 363
Bbv12I GWGCWC 1 cut(s) 363
BbvI GCAGC 2 cut(s) 38, 41
BccI CCATC 3 cut(s) 26, 257, 326
BceAI ACGGC 1 cut(s) 345
BclI TGATCA 1 cut(s) 597
BcoDI GTCTC 2 cut(s) 448, 728
BfmI CTRYAG 1 cut(s) 582
BfuAI ACCTGC 1 cut(s) 115
BisI GCNGC 6 cut(s) 52, 55, 76, 79, 82, 85
BlsI GCNGC 6 cut(s) 53, 56, 77, 80, 83, 86
Bme18I GGWCC 2 cut(s) 415, 711
BmeRI GACNNNNNGTC 1 cut(s) 717
BmgT120I GGNCC 2 cut(s) 415, 711
BmiI GGNNCC 2 cut(s) 388, 417
BmrI ACTGGG 1 cut(s) 413
BmsI GCATC 1 cut(s) 312
BmuI ACTGGG 1 cut(s) 413
Bpu10I CCTNAGC 1 cut(s) 362
BpuEI CTTGAG 1 cut(s) 377
BsaAI YACGTR 1 cut(s) 347
BsaI GGTCTC 1 cut(s) 448
BsaJI CCNNGG 2 cut(s) 382, 588
BsaXI ACNNNNNCTCC 2 cut(s) 125, 155
Bse1I ACTGG 3 cut(s) 419, 525, 784
Bse3DI GCAATG 1 cut(s) 295
BseDI CCNNGG 2 cut(s) 382, 588
BseGI GGATG 4 cut(s) 268, 351, 600, 865
BseMI GCAATG 1 cut(s) 295
BseMII CTCAG 2 cut(s) 222, 376
BseNI ACTGG 3 cut(s) 419, 525, 784
BseRI GAGGAG 5 cut(s) 19, 22, 25, 34, 59
BseXI GCAGC 2 cut(s) 38, 41
BsgI GTGCAG 1 cut(s) 40
Bsh1236I CGCG 2 cut(s) 378, 718
BsiHKAI GWGCWC 1 cut(s) 363
BsmAI GTCTC 2 cut(s) 448, 728
BsmBI CGTCTC 1 cut(s) 728
BsmI GAATGC 1 cut(s) 10
Bso31I GGTCTC 1 cut(s) 448
Bsp1286I GDGCHC 1 cut(s) 363
Bsp1407I TGTACA 2 cut(s) 499, 922
Bsp143I GATC 4 cut(s) 267, 465, 597, 760
BspACI CCGC 6 cut(s) 73, 76, 79, 82, 85, 181
BspCNI CTCAG 2 cut(s) 223, 375
BspFNI CGCG 2 cut(s) 378, 718
BspLI GGNNCC 2 cut(s) 388, 417
BspMI ACCTGC 1 cut(s) 115
BspPI GGATC 2 cut(s) 275, 473
BspTNI GGTCTC 1 cut(s) 448
BsrDI GCAATG 1 cut(s) 295
BsrGI TGTACA 2 cut(s) 499, 922
BsrI ACTGG 3 cut(s) 419, 525, 784
BssECI CCNNGG 2 cut(s) 382, 588
BssMI GATC 4 cut(s) 267, 465, 597, 760
BssNAI GTATAC 1 cut(s) 883
Bst1107I GTATAC 1 cut(s) 883
Bst4CI ACNGT 2 cut(s) 550, 866
Bst6I CTCTTC 2 cut(s) 232, 654
BstAUI TGTACA 2 cut(s) 499, 922
BstBAI YACGTR 1 cut(s) 347
BstDEI CTNAG 4 cut(s) 231, 362, 533, 843
BstEII GGTNACC 1 cut(s) 833
BstF5I GGATG 4 cut(s) 268, 351, 600, 865
BstFNI CGCG 2 cut(s) 378, 718
BstHHI GCGC 1 cut(s) 380
BstKTI GATC 4 cut(s) 270, 468, 600, 763
BstMAI GTCTC 2 cut(s) 448, 728
BstMBI GATC 4 cut(s) 267, 465, 597, 760
BstMWI GCNNNNNNNGC 4 cut(s) 81, 84, 309, 686
BstNSI RCATGY 1 cut(s) 517
BstPI GGTNACC 1 cut(s) 833
BstSFI CTRYAG 1 cut(s) 582
BstUI CGCG 2 cut(s) 378, 718
BstV1I GCAGC 2 cut(s) 38, 41
BstXI CCANNNNNNTGG 1 cut(s) 638
BstZ17I GTATAC 1 cut(s) 883
BtsCI GGATG 4 cut(s) 268, 351, 600, 865
BtsI GCAGTG 2 cut(s) 229, 471
BtsIMutI CAGTG 3 cut(s) 229, 471, 532
BveI ACCTGC 1 cut(s) 115
CfoI GCGC 1 cut(s) 380
Cfr13I GGNCC 2 cut(s) 415, 711
CseI GACGC 1 cut(s) 707
Csp6I GTAC 3 cut(s) 344, 500, 923
CviAII CATG 2 cut(s) 514, 656
CviQI GTAC 3 cut(s) 344, 500, 923
DdeI CTNAG 4 cut(s) 231, 362, 533, 843
DpnI GATC 4 cut(s) 269, 467, 599, 762
DpnII GATC 4 cut(s) 267, 465, 597, 760
DraI TTTAAA 1 cut(s) 94
DriI GACNNNNNGTC 1 cut(s) 717
Eam1104I CTCTTC 2 cut(s) 232, 654
Eam1105I GACNNNNNGTC 1 cut(s) 717
EarI CTCTTC 2 cut(s) 232, 654
EciI GGCGGA 1 cut(s) 62
Ecl136II GAGCTC 1 cut(s) 361
Eco24I GRGCYC 1 cut(s) 363
Eco31I GGTCTC 1 cut(s) 448
Eco47I GGWCC 2 cut(s) 415, 711
Eco53kI GAGCTC 1 cut(s) 361
Eco91I GGTNACC 1 cut(s) 833
EcoICRI GAGCTC 1 cut(s) 361
EcoO109I RGGNCCY 1 cut(s) 415
EcoO65I GGTNACC 1 cut(s) 833
EcoT38I GRGCYC 1 cut(s) 363
Esp3I CGTCTC 1 cut(s) 728
FaeI CATG 2 cut(s) 517, 659
FaiI YATR 9 cut(s) 89, 463, 515, 584, 657, 703, 809, 817, 883
FatI CATG 2 cut(s) 513, 655
FbaI TGATCA 1 cut(s) 597
FblI GTMKAC 2 cut(s) 326, 882
Fnu4HI GCNGC 6 cut(s) 52, 55, 76, 79, 82, 85
FokI GGATG 4 cut(s) 275, 338, 587, 872
FriOI GRGCYC 1 cut(s) 363
Fsp4HI GCNGC 6 cut(s) 52, 55, 76, 79, 82, 85
GlaI GCGC 1 cut(s) 379
GluI GCNGC 6 cut(s) 52, 55, 76, 79, 82, 85
HgaI GACGC 1 cut(s) 707
HhaI GCGC 1 cut(s) 380
Hin1II CATG 2 cut(s) 517, 659
Hin6I GCGC 1 cut(s) 378
HinP1I GCGC 1 cut(s) 378
HinfI GANTC 3 cut(s) 209, 227, 323
HphI GGTGA 4 cut(s) 96, 118, 460, 845
Hpy166II GTNNAC 4 cut(s) 327, 500, 546, 883
Hpy188I TCNGA 4 cut(s) 232, 386, 592, 605
Hpy188III TCNNGA 3 cut(s) 440, 709, 821
Hpy8I GTNNAC 4 cut(s) 327, 500, 546, 883
Hpy99I CGWCG 1 cut(s) 723
HpyAV CCTTC 2 cut(s) 362, 837
HpyCH4III ACNGT 2 cut(s) 550, 866
HpyCH4IV ACGT 1 cut(s) 346
HpyCH4V TGCA 3 cut(s) 57, 288, 303
HpyF10VI GCNNNNNNNGC 4 cut(s) 81, 84, 309, 686
HpyF3I CTNAG 4 cut(s) 231, 362, 533, 843
HpySE526I ACGT 1 cut(s) 346
Hsp92II CATG 2 cut(s) 517, 659
HspAI GCGC 1 cut(s) 378
Ksp22I TGATCA 1 cut(s) 597
Kzo9I GATC 4 cut(s) 267, 465, 597, 760
LmnI GCTCC 1 cut(s) 280
Lsp1109I GCAGC 2 cut(s) 38, 41
LweI GCATC 1 cut(s) 312
MaeII ACGT 1 cut(s) 346
MaeIII GTNAC 4 cut(s) 199, 347, 440, 833
MalI GATC 4 cut(s) 269, 467, 599, 762
MboI GATC 4 cut(s) 267, 465, 597, 760
MboII GAAGA 2 cut(s) 249, 671
MhlI GDGCHC 1 cut(s) 363
MluCI AATT 4 cut(s) 606, 610, 617, 888
MlyI GAGTC 1 cut(s) 332
MmeI TCCRAC 3 cut(s) 156, 162, 804
MroXI GAANNNNTTC 1 cut(s) 610
MseI TTAA 2 cut(s) 93, 609
Mva1269I GAATGC 1 cut(s) 10
MvnI CGCG 2 cut(s) 378, 718
MwoI GCNNNNNNNGC 4 cut(s) 81, 84, 309, 686
NdeII GATC 4 cut(s) 267, 465, 597, 760
NlaIII CATG 2 cut(s) 517, 659
NlaIV GGNNCC 2 cut(s) 388, 417
NmuCI GTSAC 3 cut(s) 347, 440, 833
NspI RCATGY 1 cut(s) 517
PaqCI CACCTGC 1 cut(s) 115
PctI GAATGC 1 cut(s) 10
PdmI GAANNNNTTC 1 cut(s) 610
PfeI GAWTC 2 cut(s) 209, 227
PkrI GCNGC 6 cut(s) 53, 56, 77, 80, 83, 86
PleI GAGTC 1 cut(s) 331
PpsI GAGTC 1 cut(s) 331
Ppu21I YACGTR 1 cut(s) 347
PpuMI RGGWCCY 1 cut(s) 415
PshBI ATTAAT 1 cut(s) 609
Psp124BI GAGCTC 1 cut(s) 363
Psp5II RGGWCCY 1 cut(s) 415
PspEI GGTNACC 1 cut(s) 833
PspN4I GGNNCC 2 cut(s) 388, 417
PspPI GGNCC 2 cut(s) 415, 711
PspPPI RGGWCCY 1 cut(s) 415
RsaI GTAC 3 cut(s) 345, 501, 924
RsaNI GTAC 3 cut(s) 344, 500, 923
SacI GAGCTC 1 cut(s) 363
SaqAI TTAA 2 cut(s) 93, 609
SatI GCNGC 6 cut(s) 52, 55, 76, 79, 82, 85
Sau3AI GATC 4 cut(s) 267, 465, 597, 760
Sau96I GGNCC 2 cut(s) 415, 711
SchI GAGTC 1 cut(s) 332
SduI GDGCHC 1 cut(s) 363
SfaNI GCATC 1 cut(s) 312
SfcI CTRYAG 1 cut(s) 582
SinI GGWCC 2 cut(s) 415, 711
SmlI CTYRAG 1 cut(s) 356
SmoI CTYRAG 1 cut(s) 356
Sse9I AATT 4 cut(s) 606, 610, 617, 888
SsiI CCGC 6 cut(s) 73, 76, 79, 82, 85, 181
SstI GAGCTC 1 cut(s) 363
TaaI ACNGT 2 cut(s) 550, 866
TaiI ACGT 1 cut(s) 349
TaqI TCGA 3 cut(s) 270, 321, 334
TasI AATT 4 cut(s) 606, 610, 617, 888
TatI WGTACW 2 cut(s) 499, 922
TauI GCSGC 4 cut(s) 78, 81, 84, 87
TfiI GAWTC 2 cut(s) 209, 227
Tru1I TTAA 2 cut(s) 93, 609
Tru9I TTAA 2 cut(s) 93, 609
TscAI CASTG 3 cut(s) 229, 478, 532
TseFI GTSAC 3 cut(s) 347, 440, 833
TseI GCWGC 2 cut(s) 51, 54
Tsp45I GTSAC 3 cut(s) 347, 440, 833
TspDTI ATGAA 2 cut(s) 17, 672
TspRI CASTG 3 cut(s) 229, 478, 532
VpaK11BI GGWCC 2 cut(s) 415, 711
VspI ATTAAT 1 cut(s) 609
XceI RCATGY 1 cut(s) 517
XmiI GTMKAC 2 cut(s) 326, 882
XmnI GAANNNNTTC 1 cut(s) 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.