Prupe.6G363100_v2.0.a1

ER membrane protein complex subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
30533065 .. 30535858
2794 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G363100.1

Sequence Viewer

Length: 924 bp
ATGGCTCTCTCCTTCTCTCGCTCGCTGTTGGTCTTGGGATTCTCCGCCTTGTTGTGTATTTCAGTAGCAGCAGCTTTCCAATCCGATGAGCTCTTATTGGACGACGAGGAGTTCGGTCTAGAAGGAGGGTTGCACACAAAGTCTCCTGATCTCACATACACACGATCCTCGCCTCCACCACCATCACCACCAACTTCATCAACCTCCCGGAAGAGGTTTTCCGATCCGGATTCGGACTCCAAGATCCAATTCCAGCTCCATCACGCCTTTGGGGACTCTGATTTCTCGCCCGCTGGTACTTTCAGTGCTCGCTTGAAGACATGGAATCACGGTGGTCAGACCCTTACAAAGCTACGATTTTCGAGGAATGCTTTTACTGAAGAGGAGAAGGAGAAGTTTGCACTACTACTGAAGGGAGATGACTTCTATAGGATAAGATTGCCGTCCAGTGTTTTGAATCCTCCGGGGAGGGATTATGTTATTTCTTCAGTAAAAGCGAGATGTCTTCCACGGGATGGTTTGGATGAGCATTTTGTTATACACACGGATGGAATTAATATCTTGGCAGTTAATTATGGTTCGCCTGGGGCATGTCCATATCCTCGGCAAATGAAACTTCCTGGAAAGTGGTCTTTTAACTCTCACACGGTTTTGAAGAATAGTGAGCAAGCACCAAGAGCTCCAGTGTTTGCTGAGGAGATTCTTGGAGGTGAGTTAGGAGAAGGTGAAGTTGTACCACCACCAGAAAGGTCCCTTTGGGCAAAATATTGGATGTACCTAATCCCGCTTGGGCTCATTGTCATGAACGCCATAACCCAAGCAATGAACATGGCAGAGGAACCGGGTGCTGGTCAGCCAGCAGGCCAAGCACAGCAGCCAGCTGCAGTCCAGCGTGGGTCAAGTTCTGCTGTGCGAAGAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

308

Amino Acids

33.66

Weight (kDa)

6.67

Isoelectric Point (pI)

60.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0015492)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65270 AT1G65270 AT1G65270
fragaria_vesca FvH4_6g00240
malus_domestica MD04G1246900.v1.1 MD12G1263300.v1.1
prunus_persica Prupe.6G363100_v2.0.a1
pyrus_communis pycom04g21760 pycom12g24060
rosa_chinensis RchiOBHm_Chr3g0447611
rosa_laevigata RLG00000025984
rosa_multiflora Rmu_sc0003550.1_g000004
rosa_roxburghii Rroxscaffold_6G00425820
rosa_rugosa Rorug02G0603500
rosa_samantha Rh3AG003700
rosa_wichuraiana Rw3G000260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 515
AccIII TCCGGA 1 cut(s) 226
AciI CCGC 3 cut(s) 45, 291, 785
AclWI GGATC 3 cut(s) 159, 218, 238
AcuI CTGAAG 3 cut(s) 399, 431, 471
AfaI GTAC 3 cut(s) 298, 735, 776
AfiI CCNNNNNNNGG 3 cut(s) 213, 515, 848
AgsI TTSAA 3 cut(s) 316, 457, 655
AjnI CCWGG 2 cut(s) 583, 619
AjuI GAANNNNNNNTTGG 2 cut(s) 233, 265
AluBI AGCT 6 cut(s) 74, 91, 256, 352, 680, 881
AluI AGCT 6 cut(s) 74, 91, 256, 352, 680, 881
Alw21I GWGCWC 3 cut(s) 93, 310, 682
Alw26I GTCTC 1 cut(s) 147
AlwI GGATC 3 cut(s) 159, 218, 238
Aor13HI TCCGGA 1 cut(s) 226
AoxI GGCC 1 cut(s) 862
ApeKI GCWGC 4 cut(s) 68, 71, 874, 881
ArsI GACNNNNNNTTYG 2 cut(s) 95, 127
AseI ATTAAT 1 cut(s) 555
AspS9I GGNCC 1 cut(s) 750
AsuC2I CCSGG 3 cut(s) 208, 465, 843
AsuHPI GGTGA 3 cut(s) 177, 722, 737
AvaII GGWCC 1 cut(s) 750
BanII GRGCYC 3 cut(s) 93, 682, 795
BbsI GAAGAC 2 cut(s) 323, 497
Bbv12I GWGCWC 3 cut(s) 93, 310, 682
BbvCI CCTCAGC 1 cut(s) 693
BbvI GCAGC 4 cut(s) 80, 83, 868, 886
BccI CCATC 4 cut(s) 190, 267, 509, 542
BceAI ACGGC 1 cut(s) 427
BciT130I CCWGG 2 cut(s) 585, 621
BcnI CCSGG 3 cut(s) 208, 465, 843
BcoDI GTCTC 1 cut(s) 147
BfaI CTAG 1 cut(s) 119
BfmI CTRYAG 2 cut(s) 427, 882
BisI GCNGC 4 cut(s) 69, 72, 875, 882
BlsI GCNGC 4 cut(s) 70, 73, 876, 883
Bme1390I CCNGG 5 cut(s) 208, 465, 585, 621, 843
Bme18I GGWCC 1 cut(s) 750
BmgT120I GGNCC 1 cut(s) 750
BmiI GGNNCC 2 cut(s) 752, 840
BmrFI CCNGG 5 cut(s) 208, 465, 585, 621, 843
BpiI GAAGAC 2 cut(s) 323, 497
BpmI CTGGAG 1 cut(s) 666
Bpu10I CCTNAGC 1 cut(s) 693
BpuMI CCSGG 3 cut(s) 208, 465, 843
BsaJI CCNNGG 4 cut(s) 464, 509, 584, 602
BsaWI WCCGGW 1 cut(s) 226
BsaXI ACNNNNNCTCC 2 cut(s) 127, 157
Bsc4I CCNNNNNNNGG 3 cut(s) 213, 515, 848
Bse1I ACTGG 2 cut(s) 447, 683
Bse3DI GCAATG 1 cut(s) 828
BseAI TCCGGA 1 cut(s) 226
BseBI CCWGG 2 cut(s) 585, 621
BseDI CCNNGG 4 cut(s) 464, 509, 584, 602
BseGI GGATG 4 cut(s) 520, 529, 553, 777
BseLI CCNNNNNNNGG 3 cut(s) 213, 515, 848
BseMI GCAATG 1 cut(s) 828
BseMII CTCAG 1 cut(s) 684
BseNI ACTGG 2 cut(s) 447, 683
BseRI GAGGAG 3 cut(s) 122, 398, 710
BseXI GCAGC 4 cut(s) 80, 83, 868, 886
BshFI GGCC 1 cut(s) 864
BsiHKAI GWGCWC 3 cut(s) 93, 310, 682
BsiSI CCGG 4 cut(s) 208, 227, 464, 842
BslFI GGGAC 2 cut(s) 287, 736
BslI CCNNNNNNNGG 3 cut(s) 213, 515, 848
BsmAI GTCTC 1 cut(s) 147
BsmFI GGGAC 2 cut(s) 287, 736
BsmI GAATGC 1 cut(s) 373
BsnI GGCC 1 cut(s) 864
Bsp1286I GDGCHC 4 cut(s) 93, 310, 682, 795
Bsp13I TCCGGA 1 cut(s) 226
Bsp143I GATC 4 cut(s) 148, 164, 223, 243
BspACI CCGC 3 cut(s) 45, 291, 785
BspANI GGCC 1 cut(s) 864
BspCNI CTCAG 1 cut(s) 685
BspEI TCCGGA 1 cut(s) 226
BspHI TCATGA 1 cut(s) 801
BspLI GGNNCC 2 cut(s) 752, 840
BspMAI CTGCAG 1 cut(s) 886
BspPI GGATC 3 cut(s) 159, 218, 238
BsrDI GCAATG 1 cut(s) 828
BsrI ACTGG 2 cut(s) 447, 683
BssECI CCNNGG 4 cut(s) 464, 509, 584, 602
BssMI GATC 4 cut(s) 148, 164, 223, 243
Bst2UI CCWGG 2 cut(s) 585, 621
Bst4CI ACNGT 2 cut(s) 332, 649
Bst6I CTCTTC 2 cut(s) 206, 375
BstC8I GCNNGC 7 cut(s) 23, 291, 310, 669, 858, 862, 879
BstDEI CTNAG 1 cut(s) 693
BstDSI CCRYGG 1 cut(s) 509
BstF5I GGATG 4 cut(s) 520, 529, 553, 777
BstKTI GATC 4 cut(s) 151, 167, 226, 246
BstMAI GTCTC 1 cut(s) 147
BstMBI GATC 4 cut(s) 148, 164, 223, 243
BstMWI GCNNNNNNNGC 2 cut(s) 677, 866
BstNI CCWGG 2 cut(s) 585, 621
BstNSI RCATGY 1 cut(s) 594
BstSCI CCNGG 5 cut(s) 206, 463, 583, 619, 841
BstSFI CTRYAG 2 cut(s) 427, 882
BstV1I GCAGC 4 cut(s) 80, 83, 868, 886
BstV2I GAAGAC 2 cut(s) 323, 497
BstX2I RGATCY 1 cut(s) 243
BstYI RGATCY 1 cut(s) 243
BsuRI GGCC 1 cut(s) 864
BtgI CCRYGG 1 cut(s) 509
BtsCI GGATG 4 cut(s) 520, 529, 553, 777
BtsIMutI CAGTG 3 cut(s) 310, 454, 690
Cac8I GCNNGC 7 cut(s) 23, 291, 310, 669, 858, 862, 879
CciI TCATGA 1 cut(s) 801
Cfr13I GGNCC 1 cut(s) 750
Csp6I GTAC 3 cut(s) 297, 734, 775
CviAII CATG 4 cut(s) 321, 591, 802, 829
CviQI GTAC 3 cut(s) 297, 734, 775
DdeI CTNAG 1 cut(s) 693
DpnI GATC 4 cut(s) 150, 166, 225, 245
DpnII GATC 4 cut(s) 148, 164, 223, 243
Eam1104I CTCTTC 2 cut(s) 206, 375
EarI CTCTTC 2 cut(s) 206, 375
EciI GGCGGA 1 cut(s) 34
Ecl136II GAGCTC 2 cut(s) 91, 680
Eco24I GRGCYC 3 cut(s) 93, 682, 795
Eco47I GGWCC 1 cut(s) 750
Eco53kI GAGCTC 2 cut(s) 91, 680
Eco57I CTGAAG 3 cut(s) 399, 431, 471
EcoICRI GAGCTC 2 cut(s) 91, 680
EcoO109I RGGNCCY 1 cut(s) 750
EcoRII CCWGG 2 cut(s) 583, 619
EcoT38I GRGCYC 3 cut(s) 93, 682, 795
FaeI CATG 4 cut(s) 324, 594, 805, 832
FaqI GGGAC 2 cut(s) 287, 736
FatI CATG 4 cut(s) 320, 590, 801, 828
FauI CCCGC 2 cut(s) 298, 792
Fnu4HI GCNGC 4 cut(s) 69, 72, 875, 882
FokI GGATG 4 cut(s) 527, 536, 560, 784
FriOI GRGCYC 3 cut(s) 93, 682, 795
Fsp4HI GCNGC 4 cut(s) 69, 72, 875, 882
FspBI CTAG 1 cut(s) 119
GluI GCNGC 4 cut(s) 69, 72, 875, 882
GsuI CTGGAG 1 cut(s) 666
HaeIII GGCC 1 cut(s) 864
HapII CCGG 4 cut(s) 208, 227, 464, 842
Hin1II CATG 4 cut(s) 324, 594, 805, 832
HinfI GANTC 7 cut(s) 39, 230, 236, 275, 325, 457, 700
HpaII CCGG 4 cut(s) 208, 227, 464, 842
HphI GGTGA 3 cut(s) 177, 722, 737
Hpy188I TCNGA 5 cut(s) 85, 223, 235, 280, 339
Hpy188III TCNNGA 4 cut(s) 119, 146, 227, 802
Hpy99I CGWCG 1 cut(s) 107
HpyAV CCTTC 5 cut(s) 22, 116, 382, 406, 716
HpyCH4III ACNGT 2 cut(s) 332, 649
HpyCH4V TGCA 3 cut(s) 133, 401, 884
HpyF10VI GCNNNNNNNGC 2 cut(s) 677, 866
HpyF3I CTNAG 1 cut(s) 693
Hsp92II CATG 4 cut(s) 324, 594, 805, 832
Kpn2I TCCGGA 1 cut(s) 226
Kzo9I GATC 4 cut(s) 148, 164, 223, 243
LmnI GCTCC 2 cut(s) 261, 685
Lsp1109I GCAGC 4 cut(s) 80, 83, 868, 886
MaeI CTAG 1 cut(s) 119
MalI GATC 4 cut(s) 150, 166, 225, 245
MboI GATC 4 cut(s) 148, 164, 223, 243
MboII GAAGA 6 cut(s) 223, 328, 392, 477, 497, 667
MflI RGATCY 1 cut(s) 243
MhlI GDGCHC 4 cut(s) 93, 310, 682, 795
MluCI AATT 3 cut(s) 248, 552, 571
MlyI GAGTC 2 cut(s) 230, 269
MroI TCCGGA 1 cut(s) 226
MseI TTAA 3 cut(s) 555, 570, 636
MslI CAYNNNNRTG 2 cut(s) 546, 800
MspA1I CMGCKG 2 cut(s) 293, 881
MspI CCGG 4 cut(s) 208, 227, 464, 842
MspR9I CCNGG 5 cut(s) 208, 465, 585, 621, 843
Mva1269I GAATGC 1 cut(s) 373
MvaI CCWGG 2 cut(s) 585, 621
MwoI GCNNNNNNNGC 2 cut(s) 677, 866
NciI CCSGG 3 cut(s) 208, 465, 843
NdeII GATC 4 cut(s) 148, 164, 223, 243
NlaIII CATG 4 cut(s) 324, 594, 805, 832
NlaIV GGNNCC 2 cut(s) 752, 840
NmeAIII GCCGAG 1 cut(s) 583
NspI RCATGY 1 cut(s) 594
PagI TCATGA 1 cut(s) 801
PctI GAATGC 1 cut(s) 373
PfeI GAWTC 5 cut(s) 39, 230, 325, 457, 700
PflMI CCANNNNNTGG 1 cut(s) 515
PfoI TCCNGGA 2 cut(s) 206, 619
PkrI GCNGC 4 cut(s) 70, 73, 876, 883
PleI GAGTC 2 cut(s) 230, 269
PpsI GAGTC 2 cut(s) 230, 269
PpuMI RGGWCCY 1 cut(s) 750
PshBI ATTAAT 1 cut(s) 555
Psp124BI GAGCTC 2 cut(s) 93, 682
Psp5II RGGWCCY 1 cut(s) 750
Psp6I CCWGG 2 cut(s) 583, 619
PspGI CCWGG 2 cut(s) 583, 619
PspN4I GGNNCC 2 cut(s) 752, 840
PspPI GGNCC 1 cut(s) 750
PspPPI RGGWCCY 1 cut(s) 750
PstI CTGCAG 1 cut(s) 886
PsuI RGATCY 1 cut(s) 243
PvuII CAGCTG 1 cut(s) 881
RsaI GTAC 3 cut(s) 298, 735, 776
RsaNI GTAC 3 cut(s) 297, 734, 775
RseI CAYNNNNRTG 2 cut(s) 546, 800
SacI GAGCTC 2 cut(s) 93, 682
SaqAI TTAA 3 cut(s) 555, 570, 636
SatI GCNGC 4 cut(s) 69, 72, 875, 882
Sau3AI GATC 4 cut(s) 148, 164, 223, 243
Sau96I GGNCC 1 cut(s) 750
SchI GAGTC 2 cut(s) 230, 269
ScrFI CCNGG 5 cut(s) 208, 465, 585, 621, 843
SduI GDGCHC 4 cut(s) 93, 310, 682, 795
SfcI CTRYAG 2 cut(s) 427, 882
SinI GGWCC 1 cut(s) 750
SmiMI CAYNNNNRTG 2 cut(s) 546, 800
Sse9I AATT 3 cut(s) 248, 552, 571
SsiI CCGC 3 cut(s) 45, 291, 785
SspI AATATT 1 cut(s) 767
SspMI CTAG 1 cut(s) 119
SstI GAGCTC 2 cut(s) 93, 682
StyD4I CCNGG 5 cut(s) 206, 463, 583, 619, 841
TaaI ACNGT 2 cut(s) 332, 649
TaqI TCGA 1 cut(s) 362
TaqII GACCGA 1 cut(s) 104
TasI AATT 3 cut(s) 248, 552, 571
TfiI GAWTC 5 cut(s) 39, 230, 325, 457, 700
Tru1I TTAA 3 cut(s) 555, 570, 636
Tru9I TTAA 3 cut(s) 555, 570, 636
TscAI CASTG 3 cut(s) 310, 454, 690
TseI GCWGC 4 cut(s) 68, 71, 874, 881
TspDTI ATGAA 4 cut(s) 186, 626, 818, 839
TspGWI ACGGA 1 cut(s) 560
TspRI CASTG 3 cut(s) 310, 454, 690
Van91I CCANNNNNTGG 1 cut(s) 515
VpaK11BI GGWCC 1 cut(s) 750
VspI ATTAAT 1 cut(s) 555
XbaI TCTAGA 1 cut(s) 118
XceI RCATGY 1 cut(s) 594
XcmI CCANNNNNNNNNTGG 1 cut(s) 266
XspI CTAG 1 cut(s) 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.