Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0008975

Physical Location & Seq

Genomic Coordinates Forward (+)

490727 .. 496614

Gene Structure 5888 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G004400.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 627 bp

ATGTCTACTCTGAACAATTCAACAAATATATTTTGGCAAGAATGTCCTGTTGGGAAGGTTGAAAGGCAGAAACTACTCAACCAAAAGGGATGTGTTGTATGGATTACGGGTCTCAGTGGATCAGGGAAAAGTACACTGGCATGCTCACTAAGTAGAGAACTGCACTCCAAGGGAAAGCTGTCATACATCCTTGATGGAGACAACCTTCGGCATGGTCTGAACAAGGATCTTGGTTTCAAAGCAGAAGACAGGGCTGAAAATATACGCAGAGTTGGGGAGGTAGCAAAACTGTTCTCGGATGCTGGATTGATCTGTATTGCTAGTCTGATATCTCCTTATAGGAAAGATCGTGATGCTTGCCGTGCAATGTTACCAGATGCAAGTTTTATTGAGGTTTTCATGAACATGCCCCTAGAATTATGTGAGTCAAGAGATGCAAAAGGCCTTTACAAGCTTGCACGTGCTGGAAAGATTAAAGGTTTTACTGGAATAGATGATCCATATGAACGACCATTGAACTGTGAGATAGAAATAGAACAGAAAGACGGAGTTTGCCCCAAGCCTGCTGCCTTGGCAGGCCAAGTAGTGTCCTACTTAGAGGAGAAAGGATTTCTTCAAGTTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00230 ko00920 ko01100 ko01120 map00230 map00920 map01100 map01120

Pfam Domains

Protein Families

APS_kinase

Protein Analysis

209

Amino Acids

23.0

Weight (kDa)

7.5

Isoelectric Point (pI)

41.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03900 AT3G03900 AT3G03900
malus_domestica	MD12G1003900.v1.1 MD14G1002700.v1.1
prunus_persica	Prupe.7G004400_v2.0.a1 Prupe.7G004400_v2.0.a1 Prupe.7G004400_v2.0.a1 Prupe.7G004400_v2.0.a1 Prupe.7G004400_v2.0.a1
pyrus_communis	pycom12g00330 pycom14g00040
rosa_chinensis	RchiOBHm_Chr3g0497061
rosa_laevigata	RLG00000022484
rosa_multiflora	Rmu_sc0001727.1_g000002
rosa_roxburghii	Rroxscaffold_6G00388430
rosa_rugosa	Rorug03G0289200 Rorug03G0289300 Rorug03G0289300
rosa_samantha	Rh3AG333600 Rh3BG370800
rosa_wichuraiana	Rw3G029300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	5
AclWI	GGATC	3 cut(s)	127, 234, 491
AcvI	CACGTG	1 cut(s)	461
AfaI	GTAC	1 cut(s)	133
AgsI	TTSAA	5 cut(s)	21, 62, 238, 517, 617
AjuI	GAANNNNNNNTTGG	2 cut(s)	33, 65
AluBI	AGCT	2 cut(s)	178, 454
AluI	AGCT	2 cut(s)	178, 454
Alw26I	GTCTC	2 cut(s)	116, 192
AlwI	GGATC	3 cut(s)	127, 234, 491
AoxI	GGCC	2 cut(s)	442, 577
ApeKI	GCWGC	1 cut(s)	566
BbrPI	CACGTG	1 cut(s)	461
BbsI	GAAGAC	1 cut(s)	252
BbvI	GCAGC	1 cut(s)	553
BccI	CCATC	1 cut(s)	188
BceAI	ACGGC	1 cut(s)	345
BcoDI	GTCTC	2 cut(s)	116, 192
BfaI	CTAG	2 cut(s)	321, 413
BisI	GCNGC	1 cut(s)	567
BlsI	GCNGC	1 cut(s)	568
BmsI	GCATC	4 cut(s)	289, 343, 367, 424
BpiI	GAAGAC	1 cut(s)	252
BsaAI	YACGTR	1 cut(s)	461
BsaI	GGTCTC	1 cut(s)	116
BsaJI	CCNNGG	2 cut(s)	168, 570
Bse1I	ACTGG	2 cut(s)	141, 490
Bse3DI	GCAATG	1 cut(s)	372
BseDI	CCNNGG	2 cut(s)	168, 570
BseGI	GGATG	3 cut(s)	95, 186, 304
BseMI	GCAATG	1 cut(s)	372
BseMII	CTCAG	1 cut(s)	127
BseNI	ACTGG	2 cut(s)	141, 490
BseRI	GAGGAG	1 cut(s)	614
BseXI	GCAGC	1 cut(s)	553
BsgI	GTGCAG	1 cut(s)	146
BshFI	GGCC	2 cut(s)	444, 579
BsmAI	GTCTC	2 cut(s)	116, 192
BsnI	GGCC	2 cut(s)	444, 579
Bso31I	GGTCTC	1 cut(s)	116
Bsp143I	GATC	5 cut(s)	119, 226, 309, 346, 496
BspANI	GGCC	2 cut(s)	444, 579
BspCNI	CTCAG	1 cut(s)	126
BspHI	TCATGA	1 cut(s)	399
BspPI	GGATC	3 cut(s)	127, 234, 491
BspTNI	GGTCTC	1 cut(s)	116
BsrDI	GCAATG	1 cut(s)	372
BsrI	ACTGG	2 cut(s)	141, 490
BssECI	CCNNGG	2 cut(s)	168, 570
BssMI	GATC	5 cut(s)	119, 226, 309, 346, 496
BssT1I	CCWWGG	2 cut(s)	168, 570
Bst4CI	ACNGT	2 cut(s)	291, 521
BstBAI	YACGTR	1 cut(s)	461
BstC8I	GCNNGC	5 cut(s)	142, 358, 456, 564, 577
BstDEI	CTNAG	3 cut(s)	113, 149, 595
BstF5I	GGATG	3 cut(s)	95, 186, 304
BstKTI	GATC	5 cut(s)	122, 229, 312, 349, 499
BstMAI	GTCTC	2 cut(s)	116, 192
BstMBI	GATC	5 cut(s)	119, 226, 309, 346, 496
BstMWI	GCNNNNNNNGC	2 cut(s)	362, 572
BstNSI	RCATGY	2 cut(s)	144, 409
BstV1I	GCAGC	1 cut(s)	553
BstV2I	GAAGAC	1 cut(s)	252
BstX2I	RGATCY	1 cut(s)	226
BstYI	RGATCY	1 cut(s)	226
BsuRI	GGCC	2 cut(s)	444, 579
BtsCI	GGATG	3 cut(s)	95, 186, 304
BtsIMutI	CAGTG	2 cut(s)	121, 134
Cac8I	GCNNGC	5 cut(s)	142, 358, 456, 564, 577
CciI	TCATGA	1 cut(s)	399
Csp6I	GTAC	1 cut(s)	132
CviAII	CATG	4 cut(s)	141, 212, 400, 406
CviJI	RGCY	6 cut(s)	178, 254, 444, 454, 562, 579
CviKI_1	RGCY	6 cut(s)	178, 254, 444, 454, 562, 579
CviQI	GTAC	1 cut(s)	132
DdeI	CTNAG	3 cut(s)	113, 149, 595
DpnI	GATC	5 cut(s)	121, 228, 311, 348, 498
DpnII	GATC	5 cut(s)	119, 226, 309, 346, 496
Eco130I	CCWWGG	2 cut(s)	168, 570
Eco147I	AGGCCT	1 cut(s)	444
Eco31I	GGTCTC	1 cut(s)	116
Eco32I	GATATC	1 cut(s)	330
Eco72I	CACGTG	1 cut(s)	461
EcoRV	GATATC	1 cut(s)	330
EcoT14I	CCWWGG	2 cut(s)	168, 570
ErhI	CCWWGG	2 cut(s)	168, 570
FaeI	CATG	4 cut(s)	144, 215, 403, 409
FalI	AAGNNNNNCTT	1 cut(s)	597
FatI	CATG	4 cut(s)	140, 211, 399, 405
FauNDI	CATATG	1 cut(s)	502
FblI	GTMKAC	1 cut(s)	5
Fnu4HI	GCNGC	1 cut(s)	567
FokI	GGATG	3 cut(s)	102, 173, 311
Fsp4HI	GCNGC	1 cut(s)	567
FspBI	CTAG	2 cut(s)	321, 413
GluI	GCNGC	1 cut(s)	567
HaeIII	GGCC	2 cut(s)	444, 579
Hin1II	CATG	4 cut(s)	144, 215, 403, 409
HindIII	AAGCTT	1 cut(s)	452
HinfI	GANTC	1 cut(s)	425
Hpy166II	GTNNAC	2 cut(s)	6, 134
Hpy188I	TCNGA	4 cut(s)	12, 219, 298, 327
Hpy188III	TCNNGA	3 cut(s)	350, 400, 429
Hpy8I	GTNNAC	2 cut(s)	6, 134
HpyAV	CCTTC	2 cut(s)	49, 215
HpyCH4III	ACNGT	2 cut(s)	291, 521
HpyCH4IV	ACGT	1 cut(s)	460
HpyCH4V	TGCA	5 cut(s)	163, 365, 380, 437, 458
HpyF10VI	GCNNNNNNNGC	2 cut(s)	362, 572
HpyF3I	CTNAG	3 cut(s)	113, 149, 595
HpySE526I	ACGT	1 cut(s)	460
Hsp92II	CATG	4 cut(s)	144, 215, 403, 409
Kzo9I	GATC	5 cut(s)	119, 226, 309, 346, 496
Lsp1109I	GCAGC	1 cut(s)	553
LweI	GCATC	4 cut(s)	289, 343, 367, 424
MaeI	CTAG	2 cut(s)	321, 413
MaeII	ACGT	1 cut(s)	460
MaeIII	GTNAC	1 cut(s)	369
MalI	GATC	5 cut(s)	121, 228, 311, 348, 498
MboI	GATC	5 cut(s)	119, 226, 309, 346, 496
MboII	GAAGA	2 cut(s)	257, 605
MflI	RGATCY	1 cut(s)	226
MluCI	AATT	2 cut(s)	16, 416
MlyI	GAGTC	1 cut(s)	434
MnlI	CCTC	3 cut(s)	271, 385, 592
MseI	TTAA	1 cut(s)	474
MslI	CAYNNNNRTG	2 cut(s)	139, 404
MwoI	GCNNNNNNNGC	2 cut(s)	362, 572
NdeI	CATATG	1 cut(s)	502
NdeII	GATC	5 cut(s)	119, 226, 309, 346, 496
NlaIII	CATG	4 cut(s)	144, 215, 403, 409
NspI	RCATGY	2 cut(s)	144, 409
PaeI	GCATGC	1 cut(s)	144
PagI	TCATGA	1 cut(s)	399
PceI	AGGCCT	1 cut(s)	444
PkrI	GCNGC	1 cut(s)	568
PleI	GAGTC	1 cut(s)	433
PmaCI	CACGTG	1 cut(s)	461
PmlI	CACGTG	1 cut(s)	461
PpsI	GAGTC	1 cut(s)	433
Ppu21I	YACGTR	1 cut(s)	461
PspCI	CACGTG	1 cut(s)	461
PsuI	RGATCY	1 cut(s)	226
RsaI	GTAC	1 cut(s)	133
RsaNI	GTAC	1 cut(s)	132
RseI	CAYNNNNRTG	2 cut(s)	139, 404
SaqAI	TTAA	1 cut(s)	474
SatI	GCNGC	1 cut(s)	567
Sau3AI	GATC	5 cut(s)	119, 226, 309, 346, 496
SchI	GAGTC	1 cut(s)	434
SetI	ASST	8 cut(s)	60, 180, 207, 282, 396, 456, 463, 481
SfaNI	GCATC	4 cut(s)	289, 343, 367, 424
SmiMI	CAYNNNNRTG	2 cut(s)	139, 404
SphI	GCATGC	1 cut(s)	144
Sse9I	AATT	2 cut(s)	16, 416
SseBI	AGGCCT	1 cut(s)	444
SspMI	CTAG	2 cut(s)	321, 413
StuI	AGGCCT	1 cut(s)	444
StyI	CCWWGG	2 cut(s)	168, 570
TaaI	ACNGT	2 cut(s)	291, 521
TaiI	ACGT	1 cut(s)	463
TasI	AATT	2 cut(s)	16, 416
TatI	WGTACW	1 cut(s)	131
Tru1I	TTAA	1 cut(s)	474
Tru9I	TTAA	1 cut(s)	474
TscAI	CASTG	2 cut(s)	121, 141
TseI	GCWGC	1 cut(s)	566
TspDTI	ATGAA	3 cut(s)	388, 416, 519
TspGWI	ACGGA	1 cut(s)	561
TspRI	CASTG	2 cut(s)	121, 141
XceI	RCATGY	2 cut(s)	144, 409
XmiI	GTMKAC	1 cut(s)	5
XspI	CTAG	2 cut(s)	321, 413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.