Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0014159

Physical Location & Seq

Genomic Coordinates Forward (+)

11726571 .. 11727642

Gene Structure 1072 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G082200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 576 bp

ATGGCCACCACCTCGTTCCTCTCGAGCTTGAAGTACTCAGACGGCCTAACAGTGGTGGGCATCTCGTTCTGCACCGCCATAGTCTGCGAGGCGATCTCATGGGTCCTCATCTACCGCACCAACTCCTACAAGTCCCTGCGCTCCTCCATTGACAAAGCCGCGAAGAAGCTCGAGACCATGAAGACCGATCCCGCCATCAAAATCGCCAAGAAGTCCAAGACCAAGAAGATCGACCGAGTAGAGACGAGCTTGAAAGAATCGAGTCGCGACCTCTCGCTCTTCAAGTTCAAATCCGGCGCCGTCGTCGCGCTCGTGCTGTTCGTCGTCTTTGGGCTGCTCAACTCGCTGTTTGAGGGGAAGGTGGTGGCGAAATTACCGTTTAAGCCCTTTGGGTTGGTGATGAAGATGAGCCACAGAGGGTTGCAGGGGGAAGATTCGACGGACTGTTCGATGGCGTTTTTGTACTTTCTCTGCTCGATTAGCATTCGGACAAATTTGCAGAAGTTCTTAGGCTTCTCGCCTCCGAGAGGTGCCAGTTCCGGGTTGTTCCCCATGCCCGATCCGAAAACCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0006983 GO:0006984 GO:0007154 GO:0007165 GO:0008150 GO:0008324 GO:0009607 GO:0009987 GO:0012505 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0016021 GO:0019725 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0030003 GO:0030176 GO:0031224 GO:0031227 GO:0031984 GO:0032469 GO:0033554 GO:0034220 GO:0034976 GO:0042175 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071216 GO:0072503 GO:0072507 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF106

Protein Analysis

192

Amino Acids

21.0

Weight (kDa)

9.79

Isoelectric Point (pI)

26.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014159)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12030 AT5G06660
fragaria_vesca	FvH4_6g21840
malus_domestica	MD00G1019800.v1.1 MD12G1054500.v1.1 MD14G1053500.v1.1
prunus_persica	Prupe.7G082200_v2.0.a1
pyrus_communis	pycom11g10000 pycom12g04750
rosa_chinensis	RchiOBHm_Chr3g0479191
rosa_laevigata	RLG00000023597
rosa_multiflora	Rmu_sc0002978.1_g000022 Rmu_sc0015470.1_g000009
rosa_roxburghii	Rroxscaffold_6G00402570
rosa_rugosa	Rorug03G0172000
rosa_samantha	Rh3CG252000
rosa_wichuraiana	Rw3G020030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	296, 530
AccII	CGCG	3 cut(s)	161, 267, 308
AciI	CCGC	4 cut(s)	75, 115, 159, 192
AclWI	GGATC	2 cut(s)	182, 554
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	493
AcyI	GRCGYC	1 cut(s)	297
AfaI	GTAC	2 cut(s)	35, 464
AfiI	CCNNNNNNNGG	3 cut(s)	52, 527, 540
AgsI	TTSAA	4 cut(s)	31, 253, 283, 289
AluBI	AGCT	3 cut(s)	27, 169, 249
AluI	AGCT	3 cut(s)	27, 169, 249
Alw26I	GTCTC	2 cut(s)	167, 236
AlwI	GGATC	2 cut(s)	182, 554
Ama87I	CYCGRG	2 cut(s)	22, 170
AoxI	GGCC	2 cut(s)	3, 43
ApeKI	GCWGC	1 cut(s)	334
ApoI	RAATTY	1 cut(s)	493
ArsI	GACNNNNNNTTYG	2 cut(s)	430, 462
AspLEI	GCGC	3 cut(s)	141, 299, 310
AspS9I	GGNCC	1 cut(s)	103
AsuC2I	CCSGG	1 cut(s)	541
AsuHPI	GGTGA	1 cut(s)	409
AvaI	CYCGRG	2 cut(s)	22, 170
AvaII	GGWCC	1 cut(s)	103
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	2 cut(s)	296, 530
BauI	CACGAG	1 cut(s)	311
BbsI	GAAGAC	1 cut(s)	188
BbvI	GCAGC	1 cut(s)	321
BccI	CCATC	2 cut(s)	203, 445
BceAI	ACGGC	2 cut(s)	58, 284
BcnI	CCSGG	1 cut(s)	541
BcoDI	GTCTC	2 cut(s)	167, 236
BfoI	RGCGCY	1 cut(s)	300
BisI	GCNGC	2 cut(s)	159, 335
BlsI	GCNGC	2 cut(s)	160, 336
BmcAI	AGTACT	1 cut(s)	35
Bme1390I	CCNGG	1 cut(s)	541
Bme18I	GGWCC	1 cut(s)	103
BmeT110I	CYCGRG	2 cut(s)	22, 170
BmgT120I	GGNCC	1 cut(s)	103
BmiI	GGNNCC	3 cut(s)	104, 298, 532
BmrFI	CCNGG	1 cut(s)	541
BmsI	GCATC	1 cut(s)	69
BpiI	GAAGAC	1 cut(s)	188
BplI	GAGNNNNNCTC	2 cut(s)	80, 112
BpuMI	CCSGG	1 cut(s)	541
BsaHI	GRCGYC	1 cut(s)	297
BsaI	GGTCTC	1 cut(s)	167
Bsc4I	CCNNNNNNNGG	3 cut(s)	52, 527, 540
Bse1I	ACTGG	1 cut(s)	534
BseLI	CCNNNNNNNGG	3 cut(s)	52, 527, 540
BseMII	CTCAG	1 cut(s)	51
BseNI	ACTGG	1 cut(s)	534
BseRI	GAGGAG	1 cut(s)	133
BseXI	GCAGC	1 cut(s)	321
BsgI	GTGCAG	1 cut(s)	55
Bsh1236I	CGCG	3 cut(s)	161, 267, 308
Bsh1285I	CGRYCG	1 cut(s)	235
BshFI	GGCC	2 cut(s)	5, 45
BshNI	GGYRCC	2 cut(s)	296, 530
BsiEI	CGRYCG	1 cut(s)	235
BsiHKCI	CYCGRG	2 cut(s)	22, 170
BsiSI	CCGG	2 cut(s)	294, 540
BslFI	GGGAC	1 cut(s)	118
BslI	CCNNNNNNNGG	3 cut(s)	52, 527, 540
BsmAI	GTCTC	2 cut(s)	167, 236
BsmBI	CGTCTC	1 cut(s)	236
BsmFI	GGGAC	1 cut(s)	118
BsmI	GAATGC	1 cut(s)	483
BsnI	GGCC	2 cut(s)	5, 45
Bso31I	GGTCTC	1 cut(s)	167
BsoBI	CYCGRG	2 cut(s)	22, 170
Bsp143I	GATC	4 cut(s)	93, 187, 228, 559
Bsp68I	TCGCGA	1 cut(s)	267
BspACI	CCGC	4 cut(s)	75, 115, 159, 192
BspANI	GGCC	2 cut(s)	5, 45
BspCNI	CTCAG	1 cut(s)	50
BspFNI	CGCG	3 cut(s)	161, 267, 308
BspLI	GGNNCC	3 cut(s)	104, 298, 532
BspPI	GGATC	2 cut(s)	182, 554
BspQI	GCTCTTC	1 cut(s)	284
BspT107I	GGYRCC	2 cut(s)	296, 530
BspTNI	GGTCTC	1 cut(s)	167
BsrI	ACTGG	1 cut(s)	534
BssMI	GATC	4 cut(s)	93, 187, 228, 559
BssNI	GRCGYC	1 cut(s)	297
BssSI	CACGAG	1 cut(s)	311
Bst2BI	CACGAG	1 cut(s)	311
Bst4CI	ACNGT	3 cut(s)	52, 378, 446
Bst6I	CTCTTC	1 cut(s)	284
BstACI	GRCGYC	1 cut(s)	297
BstDEI	CTNAG	2 cut(s)	37, 508
BstENI	CCTNNNNNAGG	1 cut(s)	525
BstFNI	CGCG	3 cut(s)	161, 267, 308
BstH2I	RGCGCY	1 cut(s)	300
BstHHI	GCGC	3 cut(s)	141, 299, 310
BstKTI	GATC	4 cut(s)	96, 190, 231, 562
BstMAI	GTCTC	2 cut(s)	167, 236
BstMBI	GATC	4 cut(s)	93, 187, 228, 559
BstMCI	CGRYCG	1 cut(s)	235
BstMWI	GCNNNNNNNGC	3 cut(s)	305, 343, 480
BstSCI	CCNGG	1 cut(s)	539
BstUI	CGCG	3 cut(s)	161, 267, 308
BstV1I	GCAGC	1 cut(s)	321
BstV2I	GAAGAC	1 cut(s)	188
BsuRI	GGCC	2 cut(s)	5, 45
BtsIMutI	CAGTG	1 cut(s)	57
BtuMI	TCGCGA	1 cut(s)	267
CfoI	GCGC	3 cut(s)	141, 299, 310
Cfr13I	GGNCC	1 cut(s)	103
Csp6I	GTAC	2 cut(s)	34, 463
CviAII	CATG	3 cut(s)	99, 178, 553
CviQI	GTAC	2 cut(s)	34, 463
DdeI	CTNAG	2 cut(s)	37, 508
DinI	GGCGCC	1 cut(s)	298
DpnI	GATC	4 cut(s)	95, 189, 230, 561
DpnII	GATC	4 cut(s)	93, 187, 228, 559
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	284
EarI	CTCTTC	1 cut(s)	284
Eco31I	GGTCTC	1 cut(s)	167
Eco47I	GGWCC	1 cut(s)	103
Eco88I	CYCGRG	2 cut(s)	22, 170
EcoNI	CCTNNNNNAGG	1 cut(s)	525
EcoO109I	RGGNCCY	1 cut(s)	103
EgeI	GGCGCC	1 cut(s)	298
EheI	GGCGCC	1 cut(s)	298
Esp3I	CGTCTC	1 cut(s)	236
FaeI	CATG	3 cut(s)	102, 181, 556
FaiI	YATR	4 cut(s)	80, 100, 179, 554
FaqI	GGGAC	1 cut(s)	118
FatI	CATG	3 cut(s)	98, 177, 552
FauI	CCCGC	1 cut(s)	199
Fnu4HI	GCNGC	2 cut(s)	159, 335
Fsp4HI	GCNGC	2 cut(s)	159, 335
GlaI	GCGC	3 cut(s)	140, 298, 309
GluI	GCNGC	2 cut(s)	159, 335
HaeII	RGCGCY	1 cut(s)	300
HaeIII	GGCC	2 cut(s)	5, 45
HapII	CCGG	2 cut(s)	294, 540
HhaI	GCGC	3 cut(s)	141, 299, 310
Hin1I	GRCGYC	1 cut(s)	297
Hin1II	CATG	3 cut(s)	102, 181, 556
Hin6I	GCGC	3 cut(s)	139, 297, 308
HinP1I	GCGC	3 cut(s)	139, 297, 308
HinfI	GANTC	3 cut(s)	257, 262, 434
HpaII	CCGG	2 cut(s)	294, 540
HphI	GGTGA	1 cut(s)	409
Hpy188I	TCNGA	4 cut(s)	40, 489, 525, 564
Hpy188III	TCNNGA	3 cut(s)	22, 172, 266
Hpy99I	CGWCG	4 cut(s)	305, 308, 326, 442
HpyAV	CCTTC	1 cut(s)	352
HpyCH4III	ACNGT	3 cut(s)	52, 378, 446
HpyCH4V	TGCA	3 cut(s)	72, 424, 499
HpyF10VI	GCNNNNNNNGC	3 cut(s)	305, 343, 480
HpyF3I	CTNAG	2 cut(s)	37, 508
Hsp92I	GRCGYC	1 cut(s)	297
Hsp92II	CATG	3 cut(s)	102, 181, 556
HspAI	GCGC	3 cut(s)	139, 297, 308
KasI	GGCGCC	1 cut(s)	296
Kzo9I	GATC	4 cut(s)	93, 187, 228, 559
LguI	GCTCTTC	1 cut(s)	284
LmnI	GCTCC	1 cut(s)	146
LpnPI	CCDG	5 cut(s)	149, 307, 410, 547, 553
Lsp1109I	GCAGC	1 cut(s)	321
LweI	GCATC	1 cut(s)	69
MalI	GATC	4 cut(s)	95, 189, 230, 561
MboI	GATC	4 cut(s)	93, 187, 228, 559
MboII	GAAGA	6 cut(s)	175, 193, 238, 271, 415, 443
MfeI	CAATTG	1 cut(s)	571
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	3 cut(s)	371, 493, 571
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	297
MlyI	GAGTC	1 cut(s)	271
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	1 cut(s)	381
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	2 cut(s)	294, 540
MspR9I	CCNGG	1 cut(s)	541
MunI	CAATTG	1 cut(s)	571
Mva1269I	GAATGC	1 cut(s)	483
MvnI	CGCG	3 cut(s)	161, 267, 308
MwoI	GCNNNNNNNGC	3 cut(s)	305, 343, 480
NarI	GGCGCC	1 cut(s)	297
NciI	CCSGG	1 cut(s)	541
NdeII	GATC	4 cut(s)	93, 187, 228, 559
NlaIII	CATG	3 cut(s)	102, 181, 556
NlaIV	GGNNCC	3 cut(s)	104, 298, 532
NruI	TCGCGA	1 cut(s)	267
PaeR7I	CTCGAG	2 cut(s)	22, 170
PciSI	GCTCTTC	1 cut(s)	284
PcsI	WCGNNNNNNNCGW	4 cut(s)	20, 309, 318, 446
PctI	GAATGC	1 cut(s)	483
PfeI	GAWTC	2 cut(s)	257, 434
PkrI	GCNGC	2 cut(s)	160, 336
PleI	GAGTC	1 cut(s)	270
PluTI	GGCGCC	1 cut(s)	300
PpsI	GAGTC	1 cut(s)	270
PpuMI	RGGWCCY	1 cut(s)	103
Psp5II	RGGWCCY	1 cut(s)	103
PspN4I	GGNNCC	3 cut(s)	104, 298, 532
PspPI	GGNCC	1 cut(s)	103
PspPPI	RGGWCCY	1 cut(s)	103
RruI	TCGCGA	1 cut(s)	267
RsaI	GTAC	2 cut(s)	35, 464
RsaNI	GTAC	2 cut(s)	34, 463
SapI	GCTCTTC	1 cut(s)	284
SaqAI	TTAA	1 cut(s)	381
SatI	GCNGC	2 cut(s)	159, 335
Sau3AI	GATC	4 cut(s)	93, 187, 228, 559
Sau96I	GGNCC	1 cut(s)	103
ScaI	AGTACT	1 cut(s)	35
SchI	GAGTC	1 cut(s)	271
ScrFI	CCNGG	1 cut(s)	541
SetI	ASST	7 cut(s)	14, 29, 171, 251, 273, 363, 532
SfaNI	GCATC	1 cut(s)	69
SfoI	GGCGCC	1 cut(s)	298
Sfr274I	CTCGAG	2 cut(s)	22, 170
SinI	GGWCC	1 cut(s)	103
SlaI	CTCGAG	2 cut(s)	22, 170
SmlI	CTYRAG	2 cut(s)	22, 170
SmoI	CTYRAG	2 cut(s)	22, 170
Sse9I	AATT	3 cut(s)	371, 493, 571
SsiI	CCGC	4 cut(s)	75, 115, 159, 192
SspDI	GGCGCC	1 cut(s)	296
StyD4I	CCNGG	1 cut(s)	539
TaaI	ACNGT	3 cut(s)	52, 378, 446
TaqI	TCGA	7 cut(s)	23, 171, 231, 260, 437, 449, 476
TaqII	GACCGA	2 cut(s)	200, 249
TasI	AATT	3 cut(s)	371, 493, 571
TatI	WGTACW	2 cut(s)	33, 462
TauI	GCSGC	1 cut(s)	161
TfiI	GAWTC	2 cut(s)	257, 434
Tru1I	TTAA	1 cut(s)	381
Tru9I	TTAA	1 cut(s)	381
TscAI	CASTG	1 cut(s)	57
TseI	GCWGC	1 cut(s)	334
TspDTI	ATGAA	2 cut(s)	194, 416
TspGWI	ACGGA	1 cut(s)	455
TspRI	CASTG	1 cut(s)	57
VpaK11BI	GGWCC	1 cut(s)	103
XagI	CCTNNNNNAGG	1 cut(s)	525
XapI	RAATTY	1 cut(s)	493
XhoI	CTCGAG	2 cut(s)	22, 170
ZrmI	AGTACT	1 cut(s)	35

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.