Prupe.7G098000_v2.0.a1
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0016609
Physical Location & Seq
Forward (+)
12934589 .. 12936033
1445 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G098000.1

Sequence Viewer

Length: 1011 bp
ATGCAAGAAACCCACTTCCTCACCACCACCAAGCAACCCTTTTTCTCCTCCTACTCCCACCCCAACCCCAAACCCCAATCCCTCTCTTCCTCTCACCATGACTCTTTACACCCCAAAAACCCAAAATCCCCCCACTTCCCAATCCTCTCCACCAAAACCACCCTCTCCCTTCCCCTCCAATCCCTCAAGCCACCCTCCTCCCCAACCCCCCACTCAGACTTCCAGGAAAAAGTCCTCTACCTAGACTCAATCGGCCTCGACTTCTTCTCCTTAATCAACCACCACCCTCCGATCCTCTCCTCCCCTCTCCCCCACATAAAATCCACCGTCCATTTCCTCCTCACCTCCATCGGCTTCAACTCCCCGGAGCTCCGCCGCCTCATTGGCATGTGCCCCGAAATCCTCTCCTCCCGAGTCGCCGAAATCGTCCCCGTCCTCACCTTCCTCCTCCGCGAGGCCCGCGTCAACGGCTCCGATCTCCGCCGCGTCCTCAATCGACGCCCCAGATTGCTTGCCTGCTGCGTCAAGACCCGCCTCCGCCCCACCCTCTACTTCCTCCAGAGCATCGGCATTTCCCAAGTGAACAAGCACACCTCTCTCCTCTCCTGCAGCGTCGAGGACAAGCTCCAGCCCCGAATCGACTACCTCGAGAAAATCGGGTTCTCTCGCCGAGACGCTCTCTCCATGTTTCGGCGGTTCCCGCAGCTCTTCTGCTACAGCATCGAGCAGAATTTCGAGCCGAAATTCAATTACTTCGTGGTGGAGATGGGGCGAGACTTGAAGGAGCTCAAGGAGTTTCCGCACTACTTCTCGTTCAGCTTGGAGAATCGGATTCGGCCGAGACACCAGCGGTGTGTGGAGAAAGGGGTTTGTTTTCCTCTGCCTGTTTTGTTAAAAACCAGTGAGGCTCGGTTTCGGGATAGGCTGGAGATTTTTTGTAATTCTTCCATCCCTTTCAGAAATTCTCCTCTGTGGTGTACAAATTCGATTTCTGATGATTTGGAAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

337

Amino Acids

38.88

Weight (kDa)

9.51

Isoelectric Point (pI)

63.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016609)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36000 AT2G36000
fragaria_vesca FvH4_6g19990
malus_domestica MD14G1036200.v1.1
prunus_persica Prupe.7G098000_v2.0.a1
pyrus_communis pycom04g09870
rosa_chinensis RchiOBHm_Chr3g0475441
rosa_laevigata RLG00000023843
rosa_roxburghii Rroxscaffold_6G00406300
rosa_rugosa Rorug03G0148900
rosa_samantha Rh3BG229000 Rh3CG223400 Rh3DG224300
rosa_wichuraiana Rw3G018060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 453, 462, 486
AclWI GGATC 1 cut(s) 286
AcoI YGGCCR 1 cut(s) 836
AcsI RAATTY 4 cut(s) 730, 743, 961, 982
AcyI GRCGYC 1 cut(s) 499
AfaI GTAC 1 cut(s) 979
AfiI CCNNNNNNNGG 2 cut(s) 454, 690
AgsI TTSAA 3 cut(s) 358, 748, 781
AjnI CCWGG 1 cut(s) 222
AluBI AGCT 5 cut(s) 370, 625, 706, 787, 819
AluI AGCT 5 cut(s) 370, 625, 706, 787, 819
Alw21I GWGCWC 2 cut(s) 372, 789
Alw26I GTCTC 3 cut(s) 666, 768, 835
AlwI GGATC 1 cut(s) 286
Ama87I CYCGRG 2 cut(s) 411, 647
AoxI GGCC 3 cut(s) 253, 456, 836
ApeKI GCWGC 3 cut(s) 519, 609, 703
ApoI RAATTY 4 cut(s) 730, 743, 961, 982
AspS9I GGNCC 1 cut(s) 457
AsuC2I CCSGG 1 cut(s) 365
AsuHPI GGTGA 4 cut(s) 13, 86, 334, 430
AvaI CYCGRG 2 cut(s) 411, 647
BaeGI GKGCMC 1 cut(s) 395
BanII GRGCYC 2 cut(s) 372, 789
Bbv12I GWGCWC 2 cut(s) 372, 789
BbvI GCAGC 3 cut(s) 506, 621, 715
BccI CCATC 3 cut(s) 356, 760, 956
BceAI ACGGC 1 cut(s) 484
BciT130I CCWGG 1 cut(s) 224
BcnI CCSGG 1 cut(s) 365
BcoDI GTCTC 3 cut(s) 666, 768, 835
BfaI CTAG 1 cut(s) 242
BfmI CTRYAG 2 cut(s) 607, 715
BglI GCCNNNNNGGC 1 cut(s) 384
BisI GCNGC 5 cut(s) 376, 484, 520, 610, 704
BlsI GCNGC 5 cut(s) 377, 485, 521, 611, 705
Bme1390I CCNGG 2 cut(s) 224, 365
BmeT110I CYCGRG 2 cut(s) 411, 647
BmgT120I GGNCC 1 cut(s) 457
BmiI GGNNCC 2 cut(s) 472, 698
BmrFI CCNGG 2 cut(s) 224, 365
BmsI GCATC 2 cut(s) 573, 729
BplI GAGNNNNNCTC 2 cut(s) 663, 695
BpmI CTGGAG 3 cut(s) 542, 611, 947
BpuEI CTTGAG 2 cut(s) 170, 773
BpuMI CCSGG 1 cut(s) 365
BsaHI GRCGYC 1 cut(s) 499
BsaJI CCNNGG 1 cut(s) 363
BsaXI ACNNNNNCTCC 4 cut(s) 251, 281, 665, 695
Bsc4I CCNNNNNNNGG 2 cut(s) 454, 690
Bse1I ACTGG 1 cut(s) 900
BseBI CCWGG 1 cut(s) 224
BseDI CCNNGG 1 cut(s) 363
BseGI GGATG 1 cut(s) 948
BseLI CCNNNNNNNGG 2 cut(s) 454, 690
BseMII CTCAG 1 cut(s) 228
BseNI ACTGG 1 cut(s) 900
BseRI GAGGAG 8 cut(s) 37, 187, 289, 329, 397, 437, 590, 957
BseSI GKGCMC 1 cut(s) 395
BseX3I CGGCCG 1 cut(s) 836
BseXI GCAGC 3 cut(s) 506, 621, 715
Bsh1236I CGCG 3 cut(s) 453, 462, 486
Bsh1285I CGRYCG 1 cut(s) 839
BshFI GGCC 3 cut(s) 255, 458, 838
BsiEI CGRYCG 1 cut(s) 839
BsiHKAI GWGCWC 2 cut(s) 372, 789
BsiHKCI CYCGRG 2 cut(s) 411, 647
BsiSI CCGG 1 cut(s) 365
BslFI GGGAC 1 cut(s) 413
BslI CCNNNNNNNGG 2 cut(s) 454, 690
BsmAI GTCTC 3 cut(s) 666, 768, 835
BsmBI CGTCTC 1 cut(s) 666
BsmFI GGGAC 1 cut(s) 413
BsnI GGCC 3 cut(s) 255, 458, 838
BsoBI CYCGRG 2 cut(s) 411, 647
Bsp1286I GDGCHC 3 cut(s) 372, 395, 789
Bsp1407I TGTACA 1 cut(s) 977
Bsp143I GATC 2 cut(s) 291, 475
BspANI GGCC 3 cut(s) 255, 458, 838
BspCNI CTCAG 1 cut(s) 227
BspFNI CGCG 3 cut(s) 453, 462, 486
BspLI GGNNCC 2 cut(s) 472, 698
BspMAI CTGCAG 1 cut(s) 611
BspPI GGATC 1 cut(s) 286
BspQI GCTCTTC 1 cut(s) 713
BsrGI TGTACA 1 cut(s) 977
BsrI ACTGG 1 cut(s) 900
BssECI CCNNGG 1 cut(s) 363
BssMI GATC 2 cut(s) 291, 475
BssNI GRCGYC 1 cut(s) 499
Bst2UI CCWGG 1 cut(s) 224
Bst4CI ACNGT 1 cut(s) 328
Bst6I CTCTTC 2 cut(s) 91, 713
BstACI GRCGYC 1 cut(s) 499
BstAUI TGTACA 1 cut(s) 977
BstC8I GCNNGC 3 cut(s) 460, 513, 517
BstDEI CTNAG 1 cut(s) 214
BstENI CCTNNNNNAGG 1 cut(s) 452
BstF5I GGATG 1 cut(s) 948
BstFNI CGCG 3 cut(s) 453, 462, 486
BstKTI GATC 2 cut(s) 294, 478
BstMAI GTCTC 3 cut(s) 666, 768, 835
BstMBI GATC 2 cut(s) 291, 475
BstMCI CGRYCG 1 cut(s) 839
BstMWI GCNNNNNNNGC 4 cut(s) 384, 459, 468, 700
BstNI CCWGG 1 cut(s) 224
BstNSI RCATGY 1 cut(s) 391
BstSCI CCNGG 2 cut(s) 222, 363
BstSFI CTRYAG 2 cut(s) 607, 715
BstSLI GKGCMC 1 cut(s) 395
BstUI CGCG 3 cut(s) 453, 462, 486
BstV1I GCAGC 3 cut(s) 506, 621, 715
BstZI CGGCCG 1 cut(s) 836
BsuRI GGCC 3 cut(s) 255, 458, 838
BtsCI GGATG 1 cut(s) 948
BtsIMutI CAGTG 1 cut(s) 907
Cac8I GCNNGC 3 cut(s) 460, 513, 517
Cfr13I GGNCC 1 cut(s) 457
CseI GACGC 6 cut(s) 451, 475, 507, 511, 601, 683
Csp6I GTAC 1 cut(s) 978
CviAII CATG 3 cut(s) 98, 388, 685
CviQI GTAC 1 cut(s) 978
DdeI CTNAG 1 cut(s) 214
DpnI GATC 2 cut(s) 293, 477
DpnII GATC 2 cut(s) 291, 475
EaeI YGGCCR 1 cut(s) 836
EagI CGGCCG 1 cut(s) 836
Eam1104I CTCTTC 2 cut(s) 91, 713
EarI CTCTTC 2 cut(s) 91, 713
EciI GGCGGA 3 cut(s) 362, 470, 527
Ecl136II GAGCTC 2 cut(s) 370, 787
EclXI CGGCCG 1 cut(s) 836
Eco24I GRGCYC 2 cut(s) 372, 789
Eco52I CGGCCG 1 cut(s) 836
Eco53kI GAGCTC 2 cut(s) 370, 787
Eco88I CYCGRG 2 cut(s) 411, 647
EcoICRI GAGCTC 2 cut(s) 370, 787
EcoNI CCTNNNNNAGG 1 cut(s) 452
EcoRII CCWGG 1 cut(s) 222
EcoT38I GRGCYC 2 cut(s) 372, 789
Esp3I CGTCTC 1 cut(s) 666
FaeI CATG 3 cut(s) 101, 391, 688
FaiI YATR 4 cut(s) 99, 317, 389, 686
FalI AAGNNNNNCTT 2 cut(s) 23, 55
FaqI GGGAC 1 cut(s) 413
FatI CATG 3 cut(s) 97, 387, 684
FauI CCCGC 3 cut(s) 467, 539, 708
Fnu4HI GCNGC 5 cut(s) 376, 484, 520, 610, 704
FokI GGATG 1 cut(s) 935
FriOI GRGCYC 2 cut(s) 372, 789
Fsp4HI GCNGC 5 cut(s) 376, 484, 520, 610, 704
FspBI CTAG 1 cut(s) 242
GluI GCNGC 5 cut(s) 376, 484, 520, 610, 704
GsuI CTGGAG 3 cut(s) 542, 611, 947
HaeIII GGCC 3 cut(s) 255, 458, 838
HapII CCGG 1 cut(s) 365
HgaI GACGC 6 cut(s) 451, 475, 507, 511, 601, 683
Hin1I GRCGYC 1 cut(s) 499
Hin1II CATG 3 cut(s) 101, 391, 688
HincII GTYRAC 1 cut(s) 466
HindII GTYRAC 1 cut(s) 466
HinfI GANTC 6 cut(s) 101, 245, 414, 636, 826, 832
HpaII CCGG 1 cut(s) 365
HphI GGTGA 4 cut(s) 13, 86, 334, 430
Hpy166II GTNNAC 3 cut(s) 466, 583, 978
Hpy188I TCNGA 6 cut(s) 217, 291, 475, 831, 959, 994
Hpy188III TCNNGA 5 cut(s) 411, 526, 559, 649, 917
Hpy8I GTNNAC 3 cut(s) 466, 583, 978
Hpy99I CGWCG 2 cut(s) 501, 617
HpyAV CCTTC 3 cut(s) 179, 451, 775
HpyCH4III ACNGT 1 cut(s) 328
HpyCH4V TGCA 2 cut(s) 4, 609
HpyF10VI GCNNNNNNNGC 4 cut(s) 384, 459, 468, 700
HpyF3I CTNAG 1 cut(s) 214
Hsp92I GRCGYC 1 cut(s) 499
Hsp92II CATG 3 cut(s) 101, 391, 688
Kzo9I GATC 2 cut(s) 291, 475
LguI GCTCTTC 1 cut(s) 713
LmnI GCTCC 5 cut(s) 367, 375, 476, 630, 784
Lsp1109I GCAGC 3 cut(s) 506, 621, 715
LweI GCATC 2 cut(s) 573, 729
MaeI CTAG 1 cut(s) 242
MalI GATC 2 cut(s) 293, 477
MboI GATC 2 cut(s) 291, 475
MboII GAAGA 4 cut(s) 78, 256, 700, 936
MhlI GDGCHC 3 cut(s) 372, 395, 789
MluCI AATT 6 cut(s) 730, 743, 748, 940, 961, 982
MlyI GAGTC 3 cut(s) 95, 239, 423
MseI TTAA 2 cut(s) 272, 893
MslI CAYNNNNRTG 1 cut(s) 386
MspA1I CMGCKG 1 cut(s) 850
MspI CCGG 1 cut(s) 365
MspR9I CCNGG 2 cut(s) 224, 365
MvaI CCWGG 1 cut(s) 224
MvnI CGCG 3 cut(s) 453, 462, 486
MwoI GCNNNNNNNGC 4 cut(s) 384, 459, 468, 700
NciI CCSGG 1 cut(s) 365
NdeII GATC 2 cut(s) 291, 475
NlaIII CATG 3 cut(s) 101, 391, 688
NlaIV GGNNCC 2 cut(s) 472, 698
NmeAIII GCCGAG 2 cut(s) 695, 864
NspI RCATGY 1 cut(s) 391
PaeR7I CTCGAG 1 cut(s) 647
PciSI GCTCTTC 1 cut(s) 713
PcsI WCGNNNNNNNCGW 2 cut(s) 423, 645
PfeI GAWTC 3 cut(s) 636, 826, 832
PfoI TCCNGGA 1 cut(s) 222
PkrI GCNGC 5 cut(s) 377, 485, 521, 611, 705
PleI GAGTC 3 cut(s) 95, 239, 422
PpsI GAGTC 3 cut(s) 95, 239, 422
Psp124BI GAGCTC 2 cut(s) 372, 789
Psp6I CCWGG 1 cut(s) 222
PspGI CCWGG 1 cut(s) 222
PspN4I GGNNCC 2 cut(s) 472, 698
PspPI GGNCC 1 cut(s) 457
PstI CTGCAG 1 cut(s) 611
RsaI GTAC 1 cut(s) 979
RsaNI GTAC 1 cut(s) 978
RseI CAYNNNNRTG 1 cut(s) 386
SacI GAGCTC 2 cut(s) 372, 789
SapI GCTCTTC 1 cut(s) 713
SaqAI TTAA 2 cut(s) 272, 893
SatI GCNGC 5 cut(s) 376, 484, 520, 610, 704
Sau3AI GATC 2 cut(s) 291, 475
Sau96I GGNCC 1 cut(s) 457
SchI GAGTC 3 cut(s) 95, 239, 423
ScrFI CCNGG 2 cut(s) 224, 365
SduI GDGCHC 3 cut(s) 372, 395, 789
SfaNI GCATC 2 cut(s) 573, 729
SfcI CTRYAG 2 cut(s) 607, 715
Sfr274I CTCGAG 1 cut(s) 647
SlaI CTCGAG 1 cut(s) 647
SmiMI CAYNNNNRTG 1 cut(s) 386
SmlI CTYRAG 3 cut(s) 185, 647, 788
SmoI CTYRAG 3 cut(s) 185, 647, 788
Sse9I AATT 6 cut(s) 730, 743, 748, 940, 961, 982
SspMI CTAG 1 cut(s) 242
SstI GAGCTC 2 cut(s) 372, 789
StyD4I CCNGG 2 cut(s) 222, 363
TaaI ACNGT 1 cut(s) 328
TaqI TCGA 8 cut(s) 258, 496, 615, 639, 648, 723, 735, 986
TasI AATT 6 cut(s) 730, 743, 748, 940, 961, 982
TatI WGTACW 1 cut(s) 977
TauI GCSGC 2 cut(s) 378, 486
TfiI GAWTC 3 cut(s) 636, 826, 832
Tru1I TTAA 2 cut(s) 272, 893
Tru9I TTAA 2 cut(s) 272, 893
TscAI CASTG 1 cut(s) 907
TseI GCWGC 3 cut(s) 519, 609, 703
TspRI CASTG 1 cut(s) 907
XagI CCTNNNNNAGG 1 cut(s) 452
XapI RAATTY 4 cut(s) 730, 743, 961, 982
XceI RCATGY 1 cut(s) 391
XhoI CTCGAG 1 cut(s) 647
XspI CTAG 1 cut(s) 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.