Prupe.7G119100_v2.0.a1

Glucomannan 4-beta-mannosyltransferase 9-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
14323785 .. 14328920
5136 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G119100.1

Sequence Viewer

Length: 1605 bp
ATGGAACGGCTTTCAACGACGACCTTTATACCAGATACATTTTTAGGTGCCAGAGATGACTTTTCCATGCAAATGGGAGTGCTTTGGAGTAAGATCAGAGCCCCATTGATCGTTCCTCTGCTAAGAATCACAATTGTGCTGTGCTTGATCATGTCGGTTATGCTCTTCATTGAGAGGCTGTACATGGGCATTGTCATTGTTCTGATAAAGCTTTTTGGACGAAAACCAGATAAGAGATACAATTGGGAGCCCATGAAAGATGATGTTGAGTTGGGAAACTCAGCTTATCCCATGGTTCTAGTCCAAATCCCAATGTACAATGAAAGAGAGGTTTATCAGCTTTCAATAAGAGCTGCATGTGGGCTATCTTGGCCTTCTGATAGGATCATCATTCAAGTCCTTGATGATTCAACAGACTCAACTGTCAAGGACATGGTGGAGCTAGAGTGCCAAAGATGGGCAAGCAAAGGCATAAACATCAAGTACGAGATAAGAGACAACAGAAATGGGTACAAAGCTGGGGCTCTCAAAGAAGGCATGAAGCGCAGCTACGTTAAACACTGCGATTATGTCGCCATCTTTGACGCTGATTTCCAACCTGAGTCAGATTTTCTCTGCCGCACCATTCCCTTCCTTGTCCACAACCCTGAGATTGCTCTCGTTCAGACTCGCTGGAAATTCGTGAACTCAAATGAGTGCTTGATGACAAGAATGCAAGAAATGTCACTGGATTATCATTTCACAGTTGAGCAAGAAGTGGGCTCCTCCACTCATGCCTTCTTTGGATTCAATGGGACCGCTGGTGTATGGAGAATTGCTGCAATCAATGAGGCTGGAGGATGGAAGGACAGAACCACAGTGGAAGATATGGATCTTGCTGTTCGAGCTAGTCTCAAAGGCTGGAAATTTGTATATCTTGGTAGCATAAAGGTGAAGAATGAATTGCCAAGTACTTTCAAGGCCTACCGCTACCAACAGCACAGATGGTCTTGTGGTCCAGCTAACCTTTTCAGGAAAATGGTCATGGAAATTATAAGAAACAAGAAAGTATCACTATGGAAGAAGATCCATGTGATTTACAGCTTCTTCTTCGTCAGGAAGATCATAGCACATATCAACGCATTTGTCTTTTACTGCATTGTCTTACCGGCAACTGTTTTGGTTCCTGAAGTTGTGGTGCCAAAGTGGGGAGGAATTTATATTCCTTCCATCATTACTCTTCTCAATGCAGTTGGCACTCCAAGGTCACTCCACTTATTGGTGTTCTGGATCCTATTTGAGAATGTCATGTCACTACACCGTACGAAGGCTACAATTATCGGTCTGCTAGAGGCTAGTCGAGTGAATGAATGGATTGTCACTGAGAAACTTGGAGATGCTCTTAAGACTTTGACAGTAGCCGCAAAATTACCCAGGAAACCTCGAATCAGGATTGGAGAAAGACTACATTTGCTAGAGCTTGCTGTTGGATGTTACCTCTTCTTCTGTGGCACTTATGACTTTGCCTTTGGGAAAAACTACGTCTTCCTTTTCCTTTACATCCAAGCAATGGCCTTCTATATCATTGGGTTTGGGTATGTTGGGACATTTGTTCCCAACTCATAG

Protein Analysis

535

Amino Acids

61.47

Weight (kDa)

9.22

Isoelectric Point (pI)

32.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012740)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1034
AasI GACNNNNNNGTC 1 cut(s) 422
AccB1I GGYRCC 2 cut(s) 47, 1177
AccB7I CCANNNNNTGG 2 cut(s) 1258, 1549
AciI CCGC 4 cut(s) 619, 798, 967, 1401
AclWI GGATC 5 cut(s) 392, 879, 1060, 1264, 1277
AcsI RAATTY 3 cut(s) 677, 905, 1194
AcuI CTGAAG 1 cut(s) 1188
AfaI GTAC 6 cut(s) 182, 317, 485, 512, 952, 1303
AfiI CCNNNNNNNGG 5 cut(s) 457, 1187, 1258, 1306, 1549
AflII CTTAAG 1 cut(s) 1382
AgsI TTSAA 6 cut(s) 15, 345, 395, 411, 790, 958
AjnI CCWGG 1 cut(s) 1412
AleI CACNNNNGTG 1 cut(s) 134
Alw26I GTCTC 2 cut(s) 489, 896
AlwI GGATC 5 cut(s) 392, 879, 1060, 1264, 1277
AoxI GGCC 3 cut(s) 371, 960, 1551
ApeKI GCWGC 3 cut(s) 353, 546, 818
ApoI RAATTY 3 cut(s) 677, 905, 1194
ArsI GACNNNNNNTTYG 2 cut(s) 1490, 1522
AspLEI GCGC 1 cut(s) 546
AspS9I GGNCC 2 cut(s) 795, 995
AsuHPI GGTGA 1 cut(s) 943
AvaII GGWCC 2 cut(s) 795, 995
BamHI GGATCC 1 cut(s) 1269
BanI GGYRCC 2 cut(s) 47, 1177
BanII GRGCYC 4 cut(s) 103, 252, 526, 764
BarI GAAGNNNNNNTAC 2 cut(s) 533, 565
BbsI GAAGAC 1 cut(s) 1516
BbvI GCAGC 3 cut(s) 340, 558, 805
BccI CCATC 5 cut(s) 450, 584, 834, 978, 1217
BceAI ACGGC 1 cut(s) 23
BciT130I CCWGG 1 cut(s) 1414
BclI TGATCA 1 cut(s) 147
BcoDI GTCTC 2 cut(s) 489, 896
BfaI CTAG 6 cut(s) 299, 443, 888, 1328, 1335, 1454
BfrI CTTAAG 1 cut(s) 1382
BisI GCNGC 5 cut(s) 354, 547, 619, 819, 1401
BlsI GCNGC 5 cut(s) 355, 548, 620, 820, 1402
BmcAI AGTACT 1 cut(s) 952
Bme1390I CCNGG 1 cut(s) 1414
Bme18I GGWCC 2 cut(s) 795, 995
BmgT120I GGNCC 2 cut(s) 795, 995
BmiI GGNNCC 7 cut(s) 49, 249, 763, 796, 1164, 1179, 1271
BmrFI CCNGG 1 cut(s) 1414
BmsI GCATC 1 cut(s) 1366
BpiI GAAGAC 1 cut(s) 1516
BplI GAGNNNNNCTC 2 cut(s) 876, 908
BpmI CTGGAG 1 cut(s) 855
BsaBI GATNNNNATC 1 cut(s) 870
BsaJI CCNNGG 3 cut(s) 291, 1241, 1412
BsaXI ACNNNNNCTCC 2 cut(s) 431, 461
Bsc4I CCNNNNNNNGG 5 cut(s) 457, 1187, 1258, 1306, 1549
Bse118I RCCGGY 1 cut(s) 1147
Bse1I ACTGG 1 cut(s) 732
Bse3DI GCAATG 1 cut(s) 1554
Bse8I GATNNNNATC 1 cut(s) 870
BseBI CCWGG 1 cut(s) 1414
BseDI CCNNGG 3 cut(s) 291, 1241, 1412
BseGI GGATG 3 cut(s) 845, 1475, 1539
BseJI GATNNNNATC 1 cut(s) 870
BseLI CCNNNNNNNGG 5 cut(s) 457, 1187, 1258, 1306, 1549
BseMI GCAATG 1 cut(s) 1554
BseMII CTCAG 4 cut(s) 294, 591, 639, 1353
BseNI ACTGG 1 cut(s) 732
BseRI GAGGAG 1 cut(s) 754
BseXI GCAGC 3 cut(s) 340, 558, 805
BseYI CCCAGC 1 cut(s) 518
BshFI GGCC 3 cut(s) 373, 962, 1553
BshNI GGYRCC 2 cut(s) 47, 1177
BsiSI CCGG 1 cut(s) 1148
BsiWI CGTACG 1 cut(s) 1301
BslFI GGGAC 2 cut(s) 808, 1597
BslI CCNNNNNNNGG 5 cut(s) 457, 1187, 1258, 1306, 1549
BsmAI GTCTC 2 cut(s) 489, 896
BsmFI GGGAC 2 cut(s) 808, 1597
BsmI GAATGC 1 cut(s) 717
BsnI GGCC 3 cut(s) 373, 962, 1553
Bsp1286I GDGCHC 4 cut(s) 103, 252, 526, 764
Bsp1407I TGTACA 2 cut(s) 180, 315
Bsp143I GATC 8 cut(s) 93, 108, 147, 384, 871, 1065, 1101, 1269
Bsp19I CCATGG 1 cut(s) 291
BspACI CCGC 4 cut(s) 619, 798, 967, 1401
BspANI GGCC 3 cut(s) 373, 962, 1553
BspCNI CTCAG 4 cut(s) 293, 592, 640, 1354
BspLI GGNNCC 7 cut(s) 49, 249, 763, 796, 1164, 1179, 1271
BspPI GGATC 5 cut(s) 392, 879, 1060, 1264, 1277
BspQI GCTCTTC 1 cut(s) 170
BspT107I GGYRCC 2 cut(s) 47, 1177
BspTI CTTAAG 1 cut(s) 1382
BsrDI GCAATG 1 cut(s) 1554
BsrFI RCCGGY 1 cut(s) 1147
BsrGI TGTACA 2 cut(s) 180, 315
BsrI ACTGG 1 cut(s) 732
BssAI RCCGGY 1 cut(s) 1147
BssECI CCNNGG 3 cut(s) 291, 1241, 1412
BssMI GATC 8 cut(s) 93, 108, 147, 384, 871, 1065, 1101, 1269
BssT1I CCWWGG 2 cut(s) 291, 1241
Bst2UI CCWGG 1 cut(s) 1414
Bst4CI ACNGT 6 cut(s) 424, 745, 859, 1156, 1301, 1396
Bst6I CTCTTC 3 cut(s) 170, 1224, 1484
BstAFI CTTAAG 1 cut(s) 1382
BstAUI TGTACA 2 cut(s) 180, 315
BstC8I GCNNGC 2 cut(s) 463, 1461
BstDEI CTNAG 5 cut(s) 122, 280, 600, 648, 1362
BstDSI CCRYGG 1 cut(s) 291
BstF5I GGATG 3 cut(s) 845, 1475, 1539
BstHHI GCGC 1 cut(s) 546
BstKTI GATC 8 cut(s) 96, 111, 150, 387, 874, 1068, 1104, 1272
BstMAI GTCTC 2 cut(s) 489, 896
BstMBI GATC 8 cut(s) 93, 108, 147, 384, 871, 1065, 1101, 1269
BstMWI GCNNNNNNNGC 3 cut(s) 370, 543, 884
BstNI CCWGG 1 cut(s) 1414
BstNSI RCATGY 1 cut(s) 360
BstSCI CCNGG 1 cut(s) 1412
BstV1I GCAGC 3 cut(s) 340, 558, 805
BstV2I GAAGAC 1 cut(s) 1516
BstX2I RGATCY 3 cut(s) 871, 1065, 1269
BstXI CCANNNNNNTGG 1 cut(s) 73
BstYI RGATCY 3 cut(s) 871, 1065, 1269
BsuRI GGCC 3 cut(s) 373, 962, 1553
BtgI CCRYGG 1 cut(s) 291
BtsCI GGATG 3 cut(s) 845, 1475, 1539
BtsI GCAGTG 1 cut(s) 559
BtsIMutI CAGTG 4 cut(s) 559, 725, 864, 1359
Cac8I GCNNGC 2 cut(s) 463, 1461
CfoI GCGC 1 cut(s) 546
Cfr10I RCCGGY 1 cut(s) 1147
Cfr13I GGNCC 2 cut(s) 795, 995
CseI GACGC 1 cut(s) 593
Csp6I GTAC 6 cut(s) 181, 316, 484, 511, 951, 1302
CviQI GTAC 6 cut(s) 181, 316, 484, 511, 951, 1302
DdeI CTNAG 5 cut(s) 122, 280, 600, 648, 1362
DpnI GATC 8 cut(s) 95, 110, 149, 386, 873, 1067, 1103, 1271
DpnII GATC 8 cut(s) 93, 108, 147, 384, 871, 1065, 1101, 1269
DrdI GACNNNNNNGTC 1 cut(s) 422
DseDI GACNNNNNNGTC 1 cut(s) 422
Eam1104I CTCTTC 3 cut(s) 170, 1224, 1484
EarI CTCTTC 3 cut(s) 170, 1224, 1484
Eco130I CCWWGG 2 cut(s) 291, 1241
Eco147I AGGCCT 1 cut(s) 962
Eco24I GRGCYC 4 cut(s) 103, 252, 526, 764
Eco47I GGWCC 2 cut(s) 795, 995
Eco57I CTGAAG 1 cut(s) 1188
EcoRII CCWGG 1 cut(s) 1412
EcoT14I CCWWGG 2 cut(s) 291, 1241
EcoT38I GRGCYC 4 cut(s) 103, 252, 526, 764
ErhI CCWWGG 2 cut(s) 291, 1241
FaqI GGGAC 2 cut(s) 808, 1597
FbaI TGATCA 1 cut(s) 147
Fnu4HI GCNGC 5 cut(s) 354, 547, 619, 819, 1401
FokI GGATG 3 cut(s) 852, 1482, 1526
FriOI GRGCYC 4 cut(s) 103, 252, 526, 764
Fsp4HI GCNGC 5 cut(s) 354, 547, 619, 819, 1401
FspBI CTAG 6 cut(s) 299, 443, 888, 1328, 1335, 1454
GlaI GCGC 1 cut(s) 545
GluI GCNGC 5 cut(s) 354, 547, 619, 819, 1401
GsaI CCCAGC 1 cut(s) 522
GsuI CTGGAG 1 cut(s) 855
HaeIII GGCC 3 cut(s) 373, 962, 1553
HapII CCGG 1 cut(s) 1148
HgaI GACGC 1 cut(s) 593
HhaI GCGC 1 cut(s) 546
Hin6I GCGC 1 cut(s) 544
HinP1I GCGC 1 cut(s) 544
HindIII AAGCTT 1 cut(s) 209
HinfI GANTC 7 cut(s) 126, 407, 416, 602, 667, 786, 1425
HpaII CCGG 1 cut(s) 1148
HphI GGTGA 1 cut(s) 943
Hpy166II GTNNAC 2 cut(s) 640, 685
Hpy188I TCNGA 5 cut(s) 98, 204, 379, 607, 666
Hpy188III TCNNGA 6 cut(s) 682, 1012, 1096, 1166, 1267, 1429
Hpy8I GTNNAC 2 cut(s) 640, 685
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 8 cut(s) 384, 527, 640, 787, 838, 1215, 1300, 1564
HpyCH4III ACNGT 6 cut(s) 424, 745, 859, 1156, 1301, 1396
HpyCH4IV ACGT 2 cut(s) 552, 1521
HpyCH4V TGCA 6 cut(s) 70, 356, 715, 821, 1137, 1229
HpyF10VI GCNNNNNNNGC 3 cut(s) 370, 543, 884
HpyF3I CTNAG 5 cut(s) 122, 280, 600, 648, 1362
HpySE526I ACGT 2 cut(s) 552, 1521
HspAI GCGC 1 cut(s) 544
Ksp22I TGATCA 1 cut(s) 147
Kzo9I GATC 8 cut(s) 93, 108, 147, 384, 871, 1065, 1101, 1269
LguI GCTCTTC 1 cut(s) 170
LmnI GCTCC 3 cut(s) 247, 439, 767
Lsp1109I GCAGC 3 cut(s) 340, 558, 805
LweI GCATC 1 cut(s) 1366
MaeI CTAG 6 cut(s) 299, 443, 888, 1328, 1335, 1454
MaeII ACGT 2 cut(s) 552, 1521
MaeIII GTNAC 5 cut(s) 723, 1245, 1290, 1357, 1472
MalI GATC 8 cut(s) 95, 110, 149, 386, 873, 1067, 1103, 1271
MboI GATC 8 cut(s) 93, 108, 147, 384, 871, 1065, 1101, 1269
MfeI CAATTG 2 cut(s) 132, 241
MflI RGATCY 3 cut(s) 871, 1065, 1269
MhlI GDGCHC 4 cut(s) 103, 252, 526, 764
MlyI GAGTC 3 cut(s) 410, 611, 661
MmeI TCCRAC 2 cut(s) 619, 1447
MseI TTAA 2 cut(s) 555, 1383
MslI CAYNNNNRTG 3 cut(s) 71, 134, 929
MspA1I CMGCKG 1 cut(s) 800
MspCI CTTAAG 1 cut(s) 1382
MspI CCGG 1 cut(s) 1148
MspR9I CCNGG 1 cut(s) 1414
MunI CAATTG 2 cut(s) 132, 241
Mva1269I GAATGC 1 cut(s) 717
MvaI CCWGG 1 cut(s) 1414
MwoI GCNNNNNNNGC 3 cut(s) 370, 543, 884
NcoI CCATGG 1 cut(s) 291
NdeII GATC 8 cut(s) 93, 108, 147, 384, 871, 1065, 1101, 1269
NlaIV GGNNCC 7 cut(s) 49, 249, 763, 796, 1164, 1179, 1271
NmuCI GTSAC 4 cut(s) 723, 1245, 1290, 1357
NspI RCATGY 1 cut(s) 360
OliI CACNNNNGTG 1 cut(s) 134
PceI AGGCCT 1 cut(s) 962
PciSI GCTCTTC 1 cut(s) 170
PctI GAATGC 1 cut(s) 717
PfeI GAWTC 4 cut(s) 126, 407, 786, 1425
Pfl23II CGTACG 1 cut(s) 1301
PflMI CCANNNNNTGG 2 cut(s) 1258, 1549
PkrI GCNGC 5 cut(s) 355, 548, 620, 820, 1402
PleI GAGTC 3 cut(s) 410, 610, 661
PpsI GAGTC 3 cut(s) 410, 610, 661
PsiI TTATAA 1 cut(s) 1034
Psp6I CCWGG 1 cut(s) 1412
PspFI CCCAGC 1 cut(s) 518
PspGI CCWGG 1 cut(s) 1412
PspLI CGTACG 1 cut(s) 1301
PspN4I GGNNCC 7 cut(s) 49, 249, 763, 796, 1164, 1179, 1271
PspPI GGNCC 2 cut(s) 795, 995
PsuI RGATCY 3 cut(s) 871, 1065, 1269
RsaI GTAC 6 cut(s) 182, 317, 485, 512, 952, 1303
RsaNI GTAC 6 cut(s) 181, 316, 484, 511, 951, 1302
RseI CAYNNNNRTG 3 cut(s) 71, 134, 929
SapI GCTCTTC 1 cut(s) 170
SaqAI TTAA 2 cut(s) 555, 1383
SatI GCNGC 5 cut(s) 354, 547, 619, 819, 1401
Sau3AI GATC 8 cut(s) 93, 108, 147, 384, 871, 1065, 1101, 1269
Sau96I GGNCC 2 cut(s) 795, 995
ScaI AGTACT 1 cut(s) 952
SchI GAGTC 3 cut(s) 410, 611, 661
ScrFI CCNGG 1 cut(s) 1414
SduI GDGCHC 4 cut(s) 103, 252, 526, 764
SfaNI GCATC 1 cut(s) 1366
SinI GGWCC 2 cut(s) 795, 995
SmiMI CAYNNNNRTG 3 cut(s) 71, 134, 929
SmlI CTYRAG 1 cut(s) 1382
SmoI CTYRAG 1 cut(s) 1382
SseBI AGGCCT 1 cut(s) 962
SsiI CCGC 4 cut(s) 619, 798, 967, 1401
SspMI CTAG 6 cut(s) 299, 443, 888, 1328, 1335, 1454
StuI AGGCCT 1 cut(s) 962
StyD4I CCNGG 1 cut(s) 1412
StyI CCWWGG 2 cut(s) 291, 1241
TaaI ACNGT 6 cut(s) 424, 745, 859, 1156, 1301, 1396
TaiI ACGT 2 cut(s) 555, 1524
TaqI TCGA 3 cut(s) 883, 1339, 1423
TaqII GACCGA 1 cut(s) 1310
TatI WGTACW 3 cut(s) 180, 315, 950
TauI GCSGC 2 cut(s) 621, 1403
TfiI GAWTC 4 cut(s) 126, 407, 786, 1425
Tru1I TTAA 2 cut(s) 555, 1383
Tru9I TTAA 2 cut(s) 555, 1383
TscAI CASTG 4 cut(s) 566, 732, 864, 1366
TseFI GTSAC 4 cut(s) 723, 1245, 1290, 1357
TseI GCWGC 3 cut(s) 353, 546, 818
Tsp45I GTSAC 4 cut(s) 723, 1245, 1290, 1357
TspDTI ATGAA 6 cut(s) 157, 269, 336, 554, 954, 1362
TspRI CASTG 4 cut(s) 566, 732, 864, 1366
Van91I CCANNNNNTGG 2 cut(s) 1258, 1549
Vha464I CTTAAG 1 cut(s) 1382
VpaK11BI GGWCC 2 cut(s) 795, 995
XapI RAATTY 3 cut(s) 677, 905, 1194
XceI RCATGY 1 cut(s) 360
XspI CTAG 6 cut(s) 299, 443, 888, 1328, 1335, 1454
ZrmI AGTACT 1 cut(s) 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.