Prupe.7G134800_v2.0.a1

B3 domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
15248906 .. 15252570
3665 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G134800.1

Sequence Viewer

Length: 1494 bp
ATGGGTCGGAATGTTGGGAAGAAAGAGACCCAATTGCACCAGGGAAGGGAGGAGAAGCCGCCTCAAACGCCGTCGTCTAAGGAGGAGGGACACCCGACTCCGGCTCAATTGTCCAAGCCCAGGCCCAGGCCCAAACCCAACACCAACCCAAAACCTTCTCTTCTCAATCCGGCAAAGCCGAAGAAGCCAAACAAGCCAAACGAGAAAGAAGTAGAGCATTCCATGCCCATGAAGGAGCTTTCCAATATCCAAATTAAGAATATGTTGGGTCAAGCAGGGAAGTCCCCGGCCCTTAGCAATACGCAGTATGAGTATCCAGTTGATGGTTCACCCTCACGAGGTCAAGCAAAGTCATCTGCTGTCATTCAAGCGCAGGAAGTTCGATCAAAACTAGAGCCTCGATTTCCTAGCTTCGTGAAATCTCTGGTCAGATCACACGTCGCTAGTTGTTTTTGGATGGGGCTTCCTTCGCTGTTCTGCAAATCACACTTACCAGATAAAGATATTACAATGACTTTGGAAGATGAAGGTGGTAGACAGTGTCAGTTGAAATACATTGCATACAAGACAGGACTGAGTGCTGGTTGGAGACAGTTTGCTGCTTCCCACAACTTGATTGAAGGAGATGTTCTTGTCTTCCAATTAGTTGAACCTACCAAATTTAAGGTTTACATAATAAGGTCAAATGATTTGACTGAAGTTGATGGGGGTCTTGGGCTTCTAAATTTGGATAGTCATACAAAACGAAAGGATGCAGATAAAGATAATGCAGAAACGGGCACTGAGGCTTGTAATGACGCTACCAGGAAACGTGCACACTCTCCTCCTTCAGAAGCGCAAAAGAAGAAAAAGATTGGCTTGCAGCCGGTTGAACAATCTGAAGATGATAGTGAGGAGGTTGATTCGGAAGTTTTGGAAGAATCCAAATCACCAGACACAGCTCTTCAATTTGAAGACATCCAAAGTTTTGAGAACTTCAGCATTCTAGTAAATGGGTTGCTTGTAGAGTCTGAGCTCCCCGAAGATGTAAGAAGAAAGTACTACAAGCTCTGCTGCAGCCAGAATGCATTTCTTCACGAAAACTTTGTCGAGGGCATGAATCATAAATTGGTTGTAGGTGCTATATCTGAAACCGTAAATATTGCTGATGCCATCAGAGCTTGCAAACTTACTACGACTCGGGATGATTTTGTGTCTTGGGACAAATATTTAAAGGCCTTTGAGCTGTTGGGGATGAATGTTGGATTTTTACGTGATCGGCTATGCCGGCTTGCAAACCTTTCCAACGACTCAGGAGCTGCTGTGGAGGCAAGGATGTATAAAGAAGCTAAAATTGAACGATCACAAGCAGGCATAGGAATAAGAAATATTGAGGTAAAGCTTGAGGAATTGAGGGATATGTGTGATGAATTTGGTGCTGCCATTGAGAGTTTGAGATCAAAAGCTGAAGTCTATACGCGCAAGTTCCATGAAGAGGTTACTGCTCCATGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

498

Amino Acids

55.69

Weight (kDa)

6.64

Isoelectric Point (pI)

50.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 323
AccI GTMKAC 1 cut(s) 535
AccII CGCG 1 cut(s) 1459
AciI CCGC 1 cut(s) 59
AcsI RAATTY 3 cut(s) 659, 724, 1409
AcuI CTGAAG 5 cut(s) 717, 813, 900, 961, 1467
AfaI GTAC 1 cut(s) 1040
AfiI CCNNNNNNNGG 7 cut(s) 46, 100, 120, 126, 323, 338, 1474
AflIII ACRYGT 1 cut(s) 436
AgsI TTSAA 8 cut(s) 368, 550, 620, 650, 872, 947, 953, 1337
AjiI CACGTC 1 cut(s) 439
AjnI CCWGG 4 cut(s) 39, 119, 125, 803
AjuI GAANNNNNNNTTGG 2 cut(s) 1091, 1123
Alw21I GWGCWC 2 cut(s) 817, 1017
Alw26I GTCTC 2 cut(s) 20, 583
Alw44I GTGCAC 1 cut(s) 813
AlwNI CAGNNNCTG 1 cut(s) 1298
Ama87I CYCGRG 1 cut(s) 1179
AoxI GGCC 4 cut(s) 122, 128, 288, 1215
ApaLI GTGCAC 1 cut(s) 813
ApeKI GCWGC 6 cut(s) 599, 862, 1053, 1056, 1298, 1418
ApoI RAATTY 3 cut(s) 659, 724, 1409
ArsI GACNNNNNNTTYG 2 cut(s) 1071, 1103
AspLEI GCGC 3 cut(s) 373, 838, 1461
AspS9I GGNCC 3 cut(s) 123, 129, 289
AsuC2I CCSGG 1 cut(s) 287
AsuHPI GGTGA 2 cut(s) 321, 921
AvaI CYCGRG 1 cut(s) 1179
BaeGI GKGCMC 2 cut(s) 782, 817
BanII GRGCYC 1 cut(s) 1017
BauI CACGAG 1 cut(s) 336
BbsI GAAGAC 2 cut(s) 628, 960
Bbv12I GWGCWC 2 cut(s) 817, 1017
BbvI GCAGC 6 cut(s) 586, 874, 1040, 1068, 1285, 1405
BccI CCATC 4 cut(s) 317, 451, 698, 1160
BceAI ACGGC 1 cut(s) 55
BcgI CGANNNNNNTGC 2 cut(s) 362, 396
BciT130I CCWGG 4 cut(s) 41, 121, 127, 805
BciVI GTATCC 1 cut(s) 324
BcnI CCSGG 1 cut(s) 287
BcoDI GTCTC 2 cut(s) 20, 583
BfaI CTAG 4 cut(s) 392, 408, 444, 986
BfmI CTRYAG 1 cut(s) 1054
BfuI GTATCC 1 cut(s) 324
BisI GCNGC 7 cut(s) 59, 600, 863, 1054, 1057, 1299, 1419
BlsI GCNGC 7 cut(s) 60, 601, 864, 1055, 1058, 1300, 1420
BmcAI AGTACT 1 cut(s) 1040
Bme1390I CCNGG 5 cut(s) 41, 121, 127, 287, 805
BmeT110I CYCGRG 1 cut(s) 1179
BmgBI CACGTC 1 cut(s) 439
BmgT120I GGNCC 3 cut(s) 123, 129, 289
BmrFI CCNGG 5 cut(s) 41, 121, 127, 287, 805
BmsI GCATC 2 cut(s) 742, 1138
BpiI GAAGAC 2 cut(s) 628, 960
Bpu10I CCTNAGC 1 cut(s) 293
BpuEI CTTGAG 1 cut(s) 1403
BpuMI CCSGG 1 cut(s) 287
BsaAI YACGTR 1 cut(s) 1253
BsaI GGTCTC 1 cut(s) 20
BsaJI CCNNGG 5 cut(s) 40, 119, 125, 285, 1487
BsaXI ACNNNNNCTCC 2 cut(s) 1287, 1317
Bsc4I CCNNNNNNNGG 7 cut(s) 46, 100, 120, 126, 323, 338, 1474
Bse118I RCCGGY 2 cut(s) 865, 1266
Bse1I ACTGG 1 cut(s) 317
Bse3DI GCAATG 1 cut(s) 555
BseBI CCWGG 4 cut(s) 41, 121, 127, 805
BseDI CCNNGG 5 cut(s) 40, 119, 125, 285, 1487
BseGI GGATG 6 cut(s) 462, 757, 957, 1189, 1239, 1320
BseLI CCNNNNNNNGG 7 cut(s) 46, 100, 120, 126, 323, 338, 1474
BseMI GCAATG 1 cut(s) 555
BseMII CTCAG 4 cut(s) 566, 774, 1002, 1305
BseNI ACTGG 1 cut(s) 317
BseRI GAGGAG 4 cut(s) 65, 98, 813, 908
BseSI GKGCMC 2 cut(s) 782, 817
BseXI GCAGC 6 cut(s) 586, 874, 1040, 1068, 1285, 1405
Bsh1236I CGCG 1 cut(s) 1459
BshFI GGCC 4 cut(s) 124, 130, 290, 1217
BsiHKAI GWGCWC 2 cut(s) 817, 1017
BsiHKCI CYCGRG 1 cut(s) 1179
BsiSI CCGG 5 cut(s) 101, 170, 287, 866, 1267
BslFI GGGAC 3 cut(s) 102, 268, 1214
BslI CCNNNNNNNGG 7 cut(s) 46, 100, 120, 126, 323, 338, 1474
BsmAI GTCTC 2 cut(s) 20, 583
BsmFI GGGAC 3 cut(s) 102, 268, 1214
BsmI GAATGC 3 cut(s) 217, 981, 1069
BsnI GGCC 4 cut(s) 124, 130, 290, 1217
Bso31I GGTCTC 1 cut(s) 20
BsoBI CYCGRG 1 cut(s) 1179
Bsp1286I GDGCHC 3 cut(s) 782, 817, 1017
Bsp143I GATC 5 cut(s) 383, 431, 1255, 1340, 1436
Bsp19I CCATGG 1 cut(s) 1487
BspACI CCGC 1 cut(s) 59
BspANI GGCC 4 cut(s) 124, 130, 290, 1217
BspCNI CTCAG 4 cut(s) 567, 775, 1003, 1304
BspFNI CGCG 1 cut(s) 1459
BspMAI CTGCAG 1 cut(s) 1058
BspQI GCTCTTC 1 cut(s) 948
BspTNI GGTCTC 1 cut(s) 20
BsrDI GCAATG 1 cut(s) 555
BsrFI RCCGGY 2 cut(s) 865, 1266
BsrI ACTGG 1 cut(s) 317
BssAI RCCGGY 2 cut(s) 865, 1266
BssECI CCNNGG 5 cut(s) 40, 119, 125, 285, 1487
BssMI GATC 5 cut(s) 383, 431, 1255, 1340, 1436
BssSI CACGAG 1 cut(s) 336
BssT1I CCWWGG 1 cut(s) 1487
Bst2BI CACGAG 1 cut(s) 336
Bst2UI CCWGG 4 cut(s) 41, 121, 127, 805
Bst4CI ACNGT 3 cut(s) 540, 594, 1135
Bst6I CTCTTC 3 cut(s) 165, 948, 1467
BstAPI GCANNNNNTGC 1 cut(s) 223
BstBAI YACGTR 1 cut(s) 1253
BstC8I GCNNGC 5 cut(s) 860, 1162, 1268, 1272, 1351
BstDEI CTNAG 6 cut(s) 78, 293, 575, 783, 1011, 1291
BstDSI CCRYGG 1 cut(s) 1487
BstF5I GGATG 6 cut(s) 462, 757, 957, 1189, 1239, 1320
BstFNI CGCG 1 cut(s) 1459
BstHHI GCGC 3 cut(s) 373, 838, 1461
BstKTI GATC 5 cut(s) 386, 434, 1258, 1343, 1439
BstMAI GTCTC 2 cut(s) 20, 583
BstMBI GATC 5 cut(s) 383, 431, 1255, 1340, 1436
BstMWI GCNNNNNNNGC 8 cut(s) 67, 184, 193, 223, 469, 1157, 1267, 1307
BstNI CCWGG 4 cut(s) 41, 121, 127, 805
BstSCI CCNGG 5 cut(s) 39, 119, 125, 285, 803
BstSFI CTRYAG 1 cut(s) 1054
BstSLI GKGCMC 2 cut(s) 782, 817
BstUI CGCG 1 cut(s) 1459
BstV1I GCAGC 6 cut(s) 586, 874, 1040, 1068, 1285, 1405
BstV2I GAAGAC 2 cut(s) 628, 960
BsuI GTATCC 1 cut(s) 324
BsuRI GGCC 4 cut(s) 124, 130, 290, 1217
BtgI CCRYGG 1 cut(s) 1487
BtrI CACGTC 1 cut(s) 439
BtsCI GGATG 6 cut(s) 462, 757, 957, 1189, 1239, 1320
BtsIMutI CAGTG 2 cut(s) 545, 780
Cac8I GCNNGC 5 cut(s) 860, 1162, 1268, 1272, 1351
CaiI CAGNNNCTG 1 cut(s) 1298
CfoI GCGC 3 cut(s) 373, 838, 1461
Cfr10I RCCGGY 2 cut(s) 865, 1266
Cfr13I GGNCC 3 cut(s) 123, 129, 289
CseI GACGC 1 cut(s) 806
Csp6I GTAC 1 cut(s) 1039
CviAII CATG 5 cut(s) 223, 229, 1096, 1469, 1488
CviQI GTAC 1 cut(s) 1039
DdeI CTNAG 6 cut(s) 78, 293, 575, 783, 1011, 1291
DpnI GATC 5 cut(s) 385, 433, 1257, 1342, 1438
DpnII GATC 5 cut(s) 383, 431, 1255, 1340, 1436
DraI TTTAAA 1 cut(s) 1212
Eam1104I CTCTTC 3 cut(s) 165, 948, 1467
EarI CTCTTC 3 cut(s) 165, 948, 1467
Ecl136II GAGCTC 1 cut(s) 1015
Eco130I CCWWGG 1 cut(s) 1487
Eco147I AGGCCT 1 cut(s) 1217
Eco24I GRGCYC 1 cut(s) 1017
Eco31I GGTCTC 1 cut(s) 20
Eco53kI GAGCTC 1 cut(s) 1015
Eco57I CTGAAG 5 cut(s) 717, 813, 900, 961, 1467
Eco88I CYCGRG 1 cut(s) 1179
EcoICRI GAGCTC 1 cut(s) 1015
EcoRII CCWGG 4 cut(s) 39, 119, 125, 803
EcoT14I CCWWGG 1 cut(s) 1487
EcoT22I ATGCAT 1 cut(s) 1069
EcoT38I GRGCYC 1 cut(s) 1017
ErhI CCWWGG 1 cut(s) 1487
FaeI CATG 5 cut(s) 226, 232, 1099, 1472, 1491
FalI AAGNNNNNCTT 2 cut(s) 842, 874
FaqI GGGAC 3 cut(s) 102, 268, 1214
FatI CATG 5 cut(s) 222, 228, 1095, 1468, 1487
FblI GTMKAC 1 cut(s) 535
Fnu4HI GCNGC 7 cut(s) 59, 600, 863, 1054, 1057, 1299, 1419
FokI GGATG 6 cut(s) 469, 764, 944, 1196, 1246, 1327
FriOI GRGCYC 1 cut(s) 1017
Fsp4HI GCNGC 7 cut(s) 59, 600, 863, 1054, 1057, 1299, 1419
FspBI CTAG 4 cut(s) 392, 408, 444, 986
GlaI GCGC 3 cut(s) 372, 837, 1460
GluI GCNGC 7 cut(s) 59, 600, 863, 1054, 1057, 1299, 1419
HaeIII GGCC 4 cut(s) 124, 130, 290, 1217
HapII CCGG 5 cut(s) 101, 170, 287, 866, 1267
HgaI GACGC 1 cut(s) 806
HhaI GCGC 3 cut(s) 373, 838, 1461
Hin1II CATG 5 cut(s) 226, 232, 1099, 1472, 1491
Hin6I GCGC 3 cut(s) 371, 836, 1459
HinP1I GCGC 3 cut(s) 371, 836, 1459
HindIII AAGCTT 1 cut(s) 1379
HinfI GANTC 7 cut(s) 97, 902, 920, 1007, 1099, 1177, 1289
HpaII CCGG 5 cut(s) 101, 170, 287, 866, 1267
HphI GGTGA 2 cut(s) 321, 921
Hpy166II GTNNAC 4 cut(s) 329, 536, 670, 815
Hpy188I TCNGA 8 cut(s) 9, 431, 832, 880, 907, 1012, 1129, 1157
Hpy188III TCNNGA 5 cut(s) 336, 415, 1076, 1181, 1293
Hpy8I GTNNAC 4 cut(s) 329, 536, 670, 815
Hpy99I CGWCG 2 cut(s) 76, 443
HpyAV CCTTC 7 cut(s) 39, 165, 226, 477, 521, 614, 837
HpyCH4III ACNGT 3 cut(s) 540, 594, 1135
HpyCH4IV ACGT 3 cut(s) 438, 811, 1252
HpyF10VI GCNNNNNNNGC 8 cut(s) 67, 184, 193, 223, 469, 1157, 1267, 1307
HpyF3I CTNAG 6 cut(s) 78, 293, 575, 783, 1011, 1291
HpySE526I ACGT 3 cut(s) 438, 811, 1252
Hsp92II CATG 5 cut(s) 226, 232, 1099, 1472, 1491
HspAI GCGC 3 cut(s) 371, 836, 1459
KroI GCCGGC 1 cut(s) 1266
KroNI GCCGGC 1 cut(s) 1268
Kzo9I GATC 5 cut(s) 383, 431, 1255, 1340, 1436
LguI GCTCTTC 1 cut(s) 948
LmnI GCTCC 4 cut(s) 235, 1020, 1295, 1489
Lsp1109I GCAGC 6 cut(s) 586, 874, 1040, 1068, 1285, 1405
LweI GCATC 2 cut(s) 742, 1138
MaeI CTAG 4 cut(s) 392, 408, 444, 986
MaeII ACGT 3 cut(s) 438, 811, 1252
MaeIII GTNAC 1 cut(s) 1477
MalI GATC 5 cut(s) 385, 433, 1257, 1342, 1438
MboI GATC 5 cut(s) 383, 431, 1255, 1340, 1436
MfeI CAATTG 2 cut(s) 32, 107
MhlI GDGCHC 3 cut(s) 782, 817, 1017
MlyI GAGTC 4 cut(s) 91, 1016, 1171, 1283
MmeI TCCRAC 3 cut(s) 566, 1222, 1308
Mph1103I ATGCAT 1 cut(s) 1069
MroNI GCCGGC 1 cut(s) 1266
MseI TTAA 3 cut(s) 255, 663, 1211
MslI CAYNNNNRTG 1 cut(s) 227
MspI CCGG 5 cut(s) 101, 170, 287, 866, 1267
MspR9I CCNGG 5 cut(s) 41, 121, 127, 287, 805
MunI CAATTG 2 cut(s) 32, 107
Mva1269I GAATGC 3 cut(s) 217, 981, 1069
MvaI CCWGG 4 cut(s) 41, 121, 127, 805
MvnI CGCG 1 cut(s) 1459
MwoI GCNNNNNNNGC 8 cut(s) 67, 184, 193, 223, 469, 1157, 1267, 1307
NaeI GCCGGC 1 cut(s) 1268
NciI CCSGG 1 cut(s) 287
NcoI CCATGG 1 cut(s) 1487
NdeII GATC 5 cut(s) 383, 431, 1255, 1340, 1436
NgoMIV GCCGGC 1 cut(s) 1266
NlaIII CATG 5 cut(s) 226, 232, 1099, 1472, 1491
NsiI ATGCAT 1 cut(s) 1069
PceI AGGCCT 1 cut(s) 1217
PciSI GCTCTTC 1 cut(s) 948
PctI GAATGC 3 cut(s) 217, 981, 1069
PdiI GCCGGC 1 cut(s) 1268
PfeI GAWTC 3 cut(s) 902, 920, 1099
PflFI GACNNNGTC 1 cut(s) 540
PflMI CCANNNNNTGG 1 cut(s) 323
PkrI GCNGC 7 cut(s) 60, 601, 864, 1055, 1058, 1300, 1420
PleI GAGTC 4 cut(s) 91, 1015, 1171, 1283
PpsI GAGTC 4 cut(s) 91, 1015, 1171, 1283
Ppu21I YACGTR 1 cut(s) 1253
Psp124BI GAGCTC 1 cut(s) 1017
Psp6I CCWGG 4 cut(s) 39, 119, 125, 803
PspGI CCWGG 4 cut(s) 39, 119, 125, 803
PspPI GGNCC 3 cut(s) 123, 129, 289
PstI CTGCAG 1 cut(s) 1058
PstNI CAGNNNCTG 1 cut(s) 1298
PsyI GACNNNGTC 1 cut(s) 540
RsaI GTAC 1 cut(s) 1040
RsaNI GTAC 1 cut(s) 1039
RseI CAYNNNNRTG 1 cut(s) 227
SacI GAGCTC 1 cut(s) 1017
SapI GCTCTTC 1 cut(s) 948
SaqAI TTAA 3 cut(s) 255, 663, 1211
SatI GCNGC 7 cut(s) 59, 600, 863, 1054, 1057, 1299, 1419
Sau3AI GATC 5 cut(s) 383, 431, 1255, 1340, 1436
Sau96I GGNCC 3 cut(s) 123, 129, 289
ScaI AGTACT 1 cut(s) 1040
SchI GAGTC 4 cut(s) 91, 1016, 1171, 1283
ScrFI CCNGG 5 cut(s) 41, 121, 127, 287, 805
SduI GDGCHC 3 cut(s) 782, 817, 1017
SfaNI GCATC 2 cut(s) 742, 1138
SfcI CTRYAG 1 cut(s) 1054
SmiMI CAYNNNNRTG 1 cut(s) 227
SmlI CTYRAG 1 cut(s) 1382
SmoI CTYRAG 1 cut(s) 1382
SseBI AGGCCT 1 cut(s) 1217
SsiI CCGC 1 cut(s) 59
SspI AATATT 3 cut(s) 1141, 1208, 1369
SspMI CTAG 4 cut(s) 392, 408, 444, 986
SstI GAGCTC 1 cut(s) 1017
StuI AGGCCT 1 cut(s) 1217
StyD4I CCNGG 5 cut(s) 39, 119, 125, 285, 803
StyI CCWWGG 1 cut(s) 1487
TaaI ACNGT 3 cut(s) 540, 594, 1135
TaiI ACGT 3 cut(s) 441, 814, 1255
TaqI TCGA 3 cut(s) 382, 400, 1089
TatI WGTACW 1 cut(s) 1038
TauI GCSGC 1 cut(s) 61
TfiI GAWTC 3 cut(s) 902, 920, 1099
Tru1I TTAA 3 cut(s) 255, 663, 1211
Tru9I TTAA 3 cut(s) 255, 663, 1211
TscAI CASTG 2 cut(s) 545, 787
TseI GCWGC 6 cut(s) 599, 862, 1053, 1056, 1298, 1418
TspDTI ATGAA 6 cut(s) 245, 540, 1112, 1250, 1422, 1485
TspRI CASTG 2 cut(s) 545, 787
Tth111I GACNNNGTC 1 cut(s) 540
Van91I CCANNNNNTGG 1 cut(s) 323
VneI GTGCAC 1 cut(s) 813
XapI RAATTY 3 cut(s) 659, 724, 1409
XmiI GTMKAC 1 cut(s) 535
XspI CTAG 4 cut(s) 392, 408, 444, 986
ZrmI AGTACT 1 cut(s) 1040
Zsp2I ATGCAT 1 cut(s) 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.