Rroxscaffold_2G00138330

B3 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0012565
Physical Location & Seq
Reverse (-)
76447297 .. 76451722
4426 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00138330.1

Sequence Viewer

Length: 1572 bp
ATGTGGCTTTTGTTGTCTCTCTTCTTTCTTTTCTTAGGCTCAGAGTCAGAGACATCTCCGTCGGTTTCTTCAGAAGAATCTAATATAATGGGTCGGAATACTAGAAAAGGAACCCCCCAACGAGCGGAGAAGAAGGAGAATAAACCTAAAACGCCGCCGTCCAAGGAGGAGGTATTGTCCCGCCTCACCAAGCCCAAACCCAAACCAAAGTCCACCAGGCCTGTTGCCACGCCGCCGGGTAATCAGAAGAAGACAAACAAGTCGAACGAGAAGGAAGTAGAGCATTCGTTGCCCATGAAGGAGCTTTCCAATACCCAGGTTAACAAAATGCTTGAGCAAGCTGCATTGGGTCATTCAGTGAAGTCCACTCCCTTAAGTAATACGCAATATGATTTTCCGATTGATGGCTCACCCTCACGTGGTCAAGCAAAGTCATCTGCAATCATTCGAGCACAGGAAGTCCGATCAAAACTAGAACCTCTATTCCCTAGCTTCGTGAAATCGCTCCTCCGATCTCATGTAGCTAGTTGTTTTTGGATGGGGCTTCCTTCACTGTTTTGCAAATCACACTTACCAGAAAAAGATATTACAATGACTCTGGAAGATGAAGGTGGAAGACAGTTTCAATCTAAGTACATTGCGTGCAAAACCGGACTGAGTGCTGGTTGGAGACAGTTTGCTGCTTCACATAAATTGTTGGAGGGAGATGTTTTGGTCTTCCAATTAGTTGAACCTGCCAAATTTAAGGTTTACGTTATAAGGTCAAATGATTTTACTGAAGTTGATGGGGCTCTTGGGCTTCTAAGTTTGGATGCTCAAACAAAACATAATGATGCAGATAAAGATAATGCAGAAACAGGTGCAGTGGCTTGCAATGAGTCTAACAGGAAACGCACCAAGTCTCCTCCTGAAGTTGTTCAAAAAAAGAAAAAGATCGACTTGCCAGTTGAACACTCTGAAATCGATAGTGAGGAAGTTGATTCAGAAGTTGTGGAAAGCTCCGGGTTACCTGGGACAACTCTTCAATTTGAGGACATCAAAAATTTTGAGAACTTCAACATTCTTGTAAATGGATTGCTTGTAGATTCTGAGTTCCCCGAAGATATACGAAGGAAGTACTACAAGCTCTGCCGCAGTCAGAATGCATTTCTTCATGAAAATGTTATGAAGGGAACATATTATAAATTGATTGTAGGAGCTATATTTGAAACTGTACATATTGTCGACGCCATTAAAGCTTGCCAGATTACCACGACTCAAGATGATTTTGTGTGTTGGGACAAATACTTGAGGGCCTTTGAGTTGTTGGGCATGAATGTTGGATTTATACGTGCGCGGTTATGCCGGCTTGCAAACCTTGCCTTTGACTCAGAAGATGCTATGGATGCGAAGACATATAAAGAAGCTAGAAAAGAACGAGCTCGAGCAGGACTAGGACTAAGAAGTATCGAGACAAAGATTCAGGAGTTGAGGGAGGCATGCCACGAATTTAGTAGTGCTATCGAGAGTCTGAGGTCCAAAGCTGAAGTCTACAATCAAAGGTTCCAGGAAGAGGTTACTGCTCCTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

523

Amino Acids

58.9

Weight (kDa)

8.2

Isoelectric Point (pI)

52.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 165 - 255 1.8e-17 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 758, 1182
AasI GACNNNNNNGTC 2 cut(s) 58, 259
Acc36I ACCTGC 1 cut(s) 742
AccBSI CCGCTC 1 cut(s) 125
AccI GTMKAC 2 cut(s) 1224, 1530
AccII CGCG 1 cut(s) 1336
AciI CCGC 6 cut(s) 125, 155, 181, 233, 1132, 1336
AcsI RAATTY 3 cut(s) 740, 1042, 1487
AcuI CTGAAG 4 cut(s) 54, 798, 930, 1545
AcvI CACGTG 1 cut(s) 419
AcyI GRCGYC 1 cut(s) 1227
AfaI GTAC 3 cut(s) 635, 1118, 1215
AfiI CCNNNNNNNGG 4 cut(s) 124, 404, 419, 1552
AflII CTTAAG 1 cut(s) 373
AgsI TTSAA 7 cut(s) 626, 731, 920, 950, 1025, 1057, 1208
AjnI CCWGG 4 cut(s) 215, 315, 1009, 1545
AloI GAACNNNNNNTCC 2 cut(s) 468, 500
Alw21I GWGCWC 2 cut(s) 454, 1423
Alw26I GTCTC 5 cut(s) 21, 44, 664, 906, 1445
Ama87I CYCGRG 1 cut(s) 1422
AoxI GGCC 2 cut(s) 218, 1293
ApeKI GCWGC 2 cut(s) 341, 680
ApoI RAATTY 3 cut(s) 740, 1042, 1487
ArsI GACNNNNNNTTYG 2 cut(s) 1512, 1544
Asp700I GAANNNNTTC 1 cut(s) 915
AspLEI GCGC 1 cut(s) 1336
AspS9I GGNCC 2 cut(s) 1293, 1515
AsuC2I CCSGG 2 cut(s) 237, 1003
AsuHPI GGTGA 2 cut(s) 178, 402
AvaI CYCGRG 1 cut(s) 1422
AvaII GGWCC 1 cut(s) 1515
BanII GRGCYC 2 cut(s) 793, 1423
BbrPI CACGTG 1 cut(s) 419
BbsI GAAGAC 4 cut(s) 257, 622, 709, 1397
Bbv12I GWGCWC 2 cut(s) 454, 1423
BbvI GCAGC 2 cut(s) 328, 667
BccI CCATC 3 cut(s) 398, 532, 779
BceAI ACGGC 1 cut(s) 142
BciT130I CCWGG 4 cut(s) 217, 317, 1011, 1547
BcnI CCSGG 2 cut(s) 237, 1003
BcoDI GTCTC 5 cut(s) 21, 44, 664, 906, 1445
BfaI CTAG 6 cut(s) 102, 473, 489, 525, 1407, 1433
BfrI CTTAAG 1 cut(s) 373
BfuAI ACCTGC 1 cut(s) 742
BisI GCNGC 5 cut(s) 155, 233, 342, 681, 1132
BlsI GCNGC 5 cut(s) 156, 234, 343, 682, 1133
BmcAI AGTACT 1 cut(s) 1118
Bme1390I CCNGG 6 cut(s) 217, 237, 317, 1003, 1011, 1547
Bme18I GGWCC 1 cut(s) 1515
BmeT110I CYCGRG 1 cut(s) 1422
BmgT120I GGNCC 2 cut(s) 1293, 1515
BmiI GGNNCC 2 cut(s) 112, 1544
BmrFI CCNGG 6 cut(s) 217, 237, 317, 1003, 1011, 1547
BmsI GCATC 4 cut(s) 802, 823, 1366, 1375
BpiI GAAGAC 4 cut(s) 257, 622, 709, 1397
BpuEI CTTGAG 3 cut(s) 353, 1242, 1309
BpuMI CCSGG 2 cut(s) 237, 1003
Bsa29I ATCGAT 1 cut(s) 963
BsaAI YACGTR 2 cut(s) 419, 1331
BsaHI GRCGYC 1 cut(s) 1227
BsaJI CCNNGG 4 cut(s) 162, 315, 1010, 1565
BsaWI WCCGGW 1 cut(s) 650
BsaXI ACNNNNNCTCC 4 cut(s) 161, 191, 886, 916
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 404, 419, 1552
Bse118I RCCGGY 1 cut(s) 1344
Bse1I ACTGG 1 cut(s) 944
Bse3DI GCAATG 2 cut(s) 636, 880
BseBI CCWGG 4 cut(s) 217, 317, 1011, 1547
BseCI ATCGAT 1 cut(s) 963
BseDI CCNNGG 4 cut(s) 162, 315, 1010, 1565
BseGI GGATG 3 cut(s) 543, 817, 1390
BseLI CCNNNNNNNGG 4 cut(s) 124, 404, 419, 1552
BseMI GCAATG 2 cut(s) 636, 880
BseMII CTCAG 5 cut(s) 54, 647, 1080, 1383, 1502
BseNI ACTGG 1 cut(s) 944
BseRI GAGGAG 3 cut(s) 182, 497, 894
BseXI GCAGC 2 cut(s) 328, 667
BsgI GTGCAG 1 cut(s) 882
Bsh1236I CGCG 1 cut(s) 1336
BshFI GGCC 2 cut(s) 220, 1295
BshVI ATCGAT 1 cut(s) 963
BsiHKAI GWGCWC 2 cut(s) 454, 1423
BsiHKCI CYCGRG 1 cut(s) 1422
BsiSI CCGG 4 cut(s) 236, 651, 1002, 1345
BslFI GGGAC 3 cut(s) 163, 1027, 1292
BslI CCNNNNNNNGG 4 cut(s) 124, 404, 419, 1552
BsmAI GTCTC 5 cut(s) 21, 44, 664, 906, 1445
BsmFI GGGAC 3 cut(s) 163, 1027, 1292
BsmI GAATGC 2 cut(s) 283, 1147
BsnI GGCC 2 cut(s) 220, 1295
BsoBI CYCGRG 1 cut(s) 1422
Bsp1286I GDGCHC 3 cut(s) 454, 793, 1423
Bsp1407I TGTACA 1 cut(s) 1213
Bsp143I GATC 3 cut(s) 464, 512, 933
BspACI CCGC 6 cut(s) 125, 155, 181, 233, 1132, 1336
BspANI GGCC 2 cut(s) 220, 1295
BspCNI CTCAG 5 cut(s) 53, 648, 1081, 1382, 1503
BspDI ATCGAT 1 cut(s) 963
BspFNI CGCG 1 cut(s) 1336
BspHI TCATGA 1 cut(s) 1153
BspLI GGNNCC 2 cut(s) 112, 1544
BspMI ACCTGC 1 cut(s) 742
BspTI CTTAAG 1 cut(s) 373
BsrBI CCGCTC 1 cut(s) 125
BsrDI GCAATG 2 cut(s) 636, 880
BsrFI RCCGGY 1 cut(s) 1344
BsrGI TGTACA 1 cut(s) 1213
BsrI ACTGG 1 cut(s) 944
BssAI RCCGGY 1 cut(s) 1344
BssECI CCNNGG 4 cut(s) 162, 315, 1010, 1565
BssMI GATC 3 cut(s) 464, 512, 933
BssNI GRCGYC 1 cut(s) 1227
BssT1I CCWWGG 2 cut(s) 162, 1565
Bst2UI CCWGG 4 cut(s) 217, 317, 1011, 1547
Bst4CI ACNGT 4 cut(s) 555, 621, 675, 1213
Bst6I CTCTTC 3 cut(s) 26, 1026, 1545
BstACI GRCGYC 1 cut(s) 1227
BstAFI CTTAAG 1 cut(s) 373
BstAPI GCANNNNNTGC 2 cut(s) 289, 1358
BstAUI TGTACA 1 cut(s) 1213
BstBAI YACGTR 2 cut(s) 419, 1331
BstC8I GCNNGC 7 cut(s) 339, 643, 871, 1240, 1346, 1350, 1480
BstDEI CTNAG 9 cut(s) 34, 40, 630, 656, 803, 1089, 1369, 1439, 1511
BstEII GGTNACC 1 cut(s) 1005
BstF5I GGATG 3 cut(s) 543, 817, 1390
BstFNI CGCG 1 cut(s) 1336
BstHHI GCGC 1 cut(s) 1336
BstKTI GATC 3 cut(s) 467, 515, 936
BstMAI GTCTC 5 cut(s) 21, 44, 664, 906, 1445
BstMBI GATC 3 cut(s) 464, 512, 933
BstMWI GCNNNNNNNGC 4 cut(s) 289, 1235, 1358, 1385
BstNI CCWGG 4 cut(s) 217, 317, 1011, 1547
BstNSI RCATGY 1 cut(s) 1482
BstPI GGTNACC 1 cut(s) 1005
BstSCI CCNGG 6 cut(s) 215, 235, 315, 1001, 1009, 1545
BstUI CGCG 1 cut(s) 1336
BstV1I GCAGC 2 cut(s) 328, 667
BstV2I GAAGAC 4 cut(s) 257, 622, 709, 1397
Bsu15I ATCGAT 1 cut(s) 963
BsuRI GGCC 2 cut(s) 220, 1295
BsuTUI ATCGAT 1 cut(s) 963
BtsCI GGATG 3 cut(s) 543, 817, 1390
BtsI GCAGTG 1 cut(s) 870
BtsIMutI CAGTG 3 cut(s) 363, 551, 870
BveI ACCTGC 1 cut(s) 742
Cac8I GCNNGC 7 cut(s) 339, 643, 871, 1240, 1346, 1350, 1480
CciI TCATGA 1 cut(s) 1153
CfoI GCGC 1 cut(s) 1336
Cfr10I RCCGGY 1 cut(s) 1344
Cfr13I GGNCC 2 cut(s) 1293, 1515
ClaI ATCGAT 1 cut(s) 963
CseI GACGC 1 cut(s) 1235
Csp6I GTAC 3 cut(s) 634, 1117, 1214
CviAII CATG 5 cut(s) 295, 518, 1154, 1312, 1479
CviQI GTAC 3 cut(s) 634, 1117, 1214
DdeI CTNAG 9 cut(s) 34, 40, 630, 656, 803, 1089, 1369, 1439, 1511
DpnI GATC 3 cut(s) 466, 514, 935
DpnII GATC 3 cut(s) 464, 512, 933
DrdI GACNNNNNNGTC 2 cut(s) 58, 259
DseDI GACNNNNNNGTC 2 cut(s) 58, 259
Eam1104I CTCTTC 3 cut(s) 26, 1026, 1545
EarI CTCTTC 3 cut(s) 26, 1026, 1545
Ecl136II GAGCTC 1 cut(s) 1421
Eco130I CCWWGG 2 cut(s) 162, 1565
Eco147I AGGCCT 1 cut(s) 220
Eco24I GRGCYC 2 cut(s) 793, 1423
Eco47I GGWCC 1 cut(s) 1515
Eco53kI GAGCTC 1 cut(s) 1421
Eco57I CTGAAG 4 cut(s) 54, 798, 930, 1545
Eco72I CACGTG 1 cut(s) 419
Eco88I CYCGRG 1 cut(s) 1422
Eco91I GGTNACC 1 cut(s) 1005
EcoICRI GAGCTC 1 cut(s) 1421
EcoO109I RGGNCCY 1 cut(s) 1293
EcoO65I GGTNACC 1 cut(s) 1005
EcoRII CCWGG 4 cut(s) 215, 315, 1009, 1545
EcoT14I CCWWGG 2 cut(s) 162, 1565
EcoT22I ATGCAT 1 cut(s) 1147
EcoT38I GRGCYC 2 cut(s) 793, 1423
ErhI CCWWGG 2 cut(s) 162, 1565
FaeI CATG 5 cut(s) 298, 521, 1157, 1315, 1482
FalI AAGNNNNNCTT 2 cut(s) 923, 955
FaqI GGGAC 3 cut(s) 163, 1027, 1292
FatI CATG 5 cut(s) 294, 517, 1153, 1311, 1478
FauI CCCGC 1 cut(s) 188
FblI GTMKAC 2 cut(s) 1224, 1530
Fnu4HI GCNGC 5 cut(s) 155, 233, 342, 681, 1132
FokI GGATG 3 cut(s) 550, 824, 1397
FriOI GRGCYC 2 cut(s) 793, 1423
Fsp4HI GCNGC 5 cut(s) 155, 233, 342, 681, 1132
FspBI CTAG 6 cut(s) 102, 473, 489, 525, 1407, 1433
GlaI GCGC 1 cut(s) 1335
GluI GCNGC 5 cut(s) 155, 233, 342, 681, 1132
HaeIII GGCC 2 cut(s) 220, 1295
HapII CCGG 4 cut(s) 236, 651, 1002, 1345
HgaI GACGC 1 cut(s) 1235
HhaI GCGC 1 cut(s) 1336
Hin1I GRCGYC 1 cut(s) 1227
Hin1II CATG 5 cut(s) 298, 521, 1157, 1315, 1482
Hin6I GCGC 1 cut(s) 1334
HinP1I GCGC 1 cut(s) 1334
HincII GTYRAC 2 cut(s) 322, 1225
HindII GTYRAC 2 cut(s) 322, 1225
HindIII AAGCTT 1 cut(s) 1236
HpaI GTTAAC 1 cut(s) 322
HpaII CCGG 4 cut(s) 236, 651, 1002, 1345
HphI GGTGA 2 cut(s) 178, 402
Hpy166II GTNNAC 6 cut(s) 213, 322, 366, 751, 1225, 1531
Hpy188III TCNNGA 8 cut(s) 496, 599, 908, 1154, 1259, 1450, 1463, 1504
Hpy8I GTNNAC 6 cut(s) 213, 322, 366, 751, 1225, 1531
Hpy99I CGWCG 2 cut(s) 64, 1229
HpyAV CCTTC 7 cut(s) 127, 265, 292, 558, 602, 1104, 1162
HpyCH4III ACNGT 4 cut(s) 555, 621, 675, 1213
HpyCH4IV ACGT 3 cut(s) 418, 753, 1330
HpyF10VI GCNNNNNNNGC 4 cut(s) 289, 1235, 1358, 1385
HpyF3I CTNAG 9 cut(s) 34, 40, 630, 656, 803, 1089, 1369, 1439, 1511
HpySE526I ACGT 3 cut(s) 418, 753, 1330
Hsp92I GRCGYC 1 cut(s) 1227
Hsp92II CATG 5 cut(s) 298, 521, 1157, 1315, 1482
HspAI GCGC 1 cut(s) 1334
KroI GCCGGC 1 cut(s) 1344
KroNI GCCGGC 1 cut(s) 1346
KspAI GTTAAC 1 cut(s) 322
Kzo9I GATC 3 cut(s) 464, 512, 933
LmnI GCTCC 5 cut(s) 301, 510, 1004, 1196, 1567
Lsp1109I GCAGC 2 cut(s) 328, 667
LweI GCATC 4 cut(s) 802, 823, 1366, 1375
MaeI CTAG 6 cut(s) 102, 473, 489, 525, 1407, 1433
MaeII ACGT 3 cut(s) 418, 753, 1330
MaeIII GTNAC 2 cut(s) 1005, 1555
MalI GATC 3 cut(s) 466, 514, 935
MbiI CCGCTC 1 cut(s) 125
MboI GATC 3 cut(s) 464, 512, 933
MhlI GDGCHC 3 cut(s) 454, 793, 1423
MluCI AATT 7 cut(s) 692, 722, 740, 1025, 1042, 1184, 1487
MlyI GAGTC 6 cut(s) 53, 589, 887, 1249, 1361, 1516
MmeI TCCRAC 4 cut(s) 74, 647, 678, 1300
Mph1103I ATGCAT 1 cut(s) 1147
MroNI GCCGGC 1 cut(s) 1344
MroXI GAANNNNTTC 1 cut(s) 915
MseI TTAA 4 cut(s) 321, 374, 744, 1233
MslI CAYNNNNRTG 2 cut(s) 831, 1158
MspCI CTTAAG 1 cut(s) 373
MspI CCGG 4 cut(s) 236, 651, 1002, 1345
MspR9I CCNGG 6 cut(s) 217, 237, 317, 1003, 1011, 1547
Mva1269I GAATGC 2 cut(s) 283, 1147
MvaI CCWGG 4 cut(s) 217, 317, 1011, 1547
MvnI CGCG 1 cut(s) 1336
MwoI GCNNNNNNNGC 4 cut(s) 289, 1235, 1358, 1385
NaeI GCCGGC 1 cut(s) 1346
NciI CCSGG 2 cut(s) 237, 1003
NdeII GATC 3 cut(s) 464, 512, 933
NgoMIV GCCGGC 1 cut(s) 1344
NlaIII CATG 5 cut(s) 298, 521, 1157, 1315, 1482
NlaIV GGNNCC 2 cut(s) 112, 1544
NsiI ATGCAT 1 cut(s) 1147
NspI RCATGY 1 cut(s) 1482
PaeI GCATGC 1 cut(s) 1482
PaeR7I CTCGAG 1 cut(s) 1422
PagI TCATGA 1 cut(s) 1153
PceI AGGCCT 1 cut(s) 220
PctI GAATGC 2 cut(s) 283, 1147
PdiI GCCGGC 1 cut(s) 1346
PdmI GAANNNNTTC 1 cut(s) 915
PfeI GAWTC 4 cut(s) 77, 980, 1085, 1459
PfoI TCCNGGA 1 cut(s) 1545
PkrI GCNGC 5 cut(s) 156, 234, 343, 682, 1133
PleI GAGTC 6 cut(s) 52, 589, 886, 1249, 1361, 1515
PmaCI CACGTG 1 cut(s) 419
PmlI CACGTG 1 cut(s) 419
PpsI GAGTC 6 cut(s) 52, 589, 886, 1249, 1361, 1515
Ppu21I YACGTR 2 cut(s) 419, 1331
PsiI TTATAA 2 cut(s) 758, 1182
Psp124BI GAGCTC 1 cut(s) 1423
Psp6I CCWGG 4 cut(s) 215, 315, 1009, 1545
PspCI CACGTG 1 cut(s) 419
PspEI GGTNACC 1 cut(s) 1005
PspGI CCWGG 4 cut(s) 215, 315, 1009, 1545
PspN4I GGNNCC 2 cut(s) 112, 1544
PspPI GGNCC 2 cut(s) 1293, 1515
PspXI VCTCGAGB 1 cut(s) 1422
RsaI GTAC 3 cut(s) 635, 1118, 1215
RsaNI GTAC 3 cut(s) 634, 1117, 1214
RseI CAYNNNNRTG 2 cut(s) 831, 1158
SacI GAGCTC 1 cut(s) 1423
SalI GTCGAC 1 cut(s) 1223
SaqAI TTAA 4 cut(s) 321, 374, 744, 1233
SatI GCNGC 5 cut(s) 155, 233, 342, 681, 1132
Sau3AI GATC 3 cut(s) 464, 512, 933
Sau96I GGNCC 2 cut(s) 1293, 1515
ScaI AGTACT 1 cut(s) 1118
SchI GAGTC 6 cut(s) 53, 589, 887, 1249, 1361, 1516
ScrFI CCNGG 6 cut(s) 217, 237, 317, 1003, 1011, 1547
SduI GDGCHC 3 cut(s) 454, 793, 1423
SfaNI GCATC 4 cut(s) 802, 823, 1366, 1375
Sfr274I CTCGAG 1 cut(s) 1422
SinI GGWCC 1 cut(s) 1515
SlaI CTCGAG 1 cut(s) 1422
SmiMI CAYNNNNRTG 2 cut(s) 831, 1158
SmlI CTYRAG 5 cut(s) 332, 373, 1257, 1288, 1422
SmoI CTYRAG 5 cut(s) 332, 373, 1257, 1288, 1422
SphI GCATGC 1 cut(s) 1482
Sse9I AATT 7 cut(s) 692, 722, 740, 1025, 1042, 1184, 1487
SseBI AGGCCT 1 cut(s) 220
SsiI CCGC 6 cut(s) 125, 155, 181, 233, 1132, 1336
SspMI CTAG 6 cut(s) 102, 473, 489, 525, 1407, 1433
SstI GAGCTC 1 cut(s) 1423
StuI AGGCCT 1 cut(s) 220
StyD4I CCNGG 6 cut(s) 215, 235, 315, 1001, 1009, 1545
StyI CCWWGG 2 cut(s) 162, 1565
TaaI ACNGT 4 cut(s) 555, 621, 675, 1213
TaiI ACGT 3 cut(s) 421, 756, 1333
TaqI TCGA 8 cut(s) 263, 448, 936, 963, 1224, 1423, 1449, 1503
TasI AATT 7 cut(s) 692, 722, 740, 1025, 1042, 1184, 1487
TatI WGTACW 3 cut(s) 633, 1116, 1213
TauI GCSGC 3 cut(s) 157, 235, 1134
TfiI GAWTC 4 cut(s) 77, 980, 1085, 1459
Tru1I TTAA 4 cut(s) 321, 374, 744, 1233
Tru9I TTAA 4 cut(s) 321, 374, 744, 1233
TscAI CASTG 3 cut(s) 363, 558, 870
TseI GCWGC 2 cut(s) 341, 680
TspDTI ATGAA 6 cut(s) 311, 621, 1142, 1170, 1181, 1328
TspGWI ACGGA 1 cut(s) 48
TspRI CASTG 3 cut(s) 363, 558, 870
Vha464I CTTAAG 1 cut(s) 373
VpaK11BI GGWCC 1 cut(s) 1515
XapI RAATTY 3 cut(s) 740, 1042, 1487
XceI RCATGY 1 cut(s) 1482
XhoI CTCGAG 1 cut(s) 1422
XmiI GTMKAC 2 cut(s) 1224, 1530
XmnI GAANNNNTTC 1 cut(s) 915
XspI CTAG 6 cut(s) 102, 473, 489, 525, 1407, 1433
ZrmI AGTACT 1 cut(s) 1118
Zsp2I ATGCAT 1 cut(s) 1147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.