Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0015083

Physical Location & Seq

Genomic Coordinates Reverse (-)

16272567 .. 16273616

Gene Structure 1050 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G152000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1050 bp

ATGGCGAAACGTTTCAAGTTCCGAATCTCCCGAGTGATCCCCTCCTTCCAATCTTGCCGTTCAAAAGACCCCTCCACTCTCCCCTCAAATCCTGTCCCTTCATTTCTCTCCCGACCACCCCCCTTAGTCAACCACGTGAACTTCCCAGCCACCACCCCACTACCACCACCTCTACCGTCCAAAATCCATCACCACTCCTCCATCAAACGCCACGTGTTATTCTGTGGCATCAGATCCAGACCAACACTCTCCGACGACGACCGCACCAGATCGCCGCCTGACCATCATCATAAGTTCGAGTGGGAAAGAGAGGATAAGTGGCACGTGGTCGCCAAGGTCTACGACATTAACCCACGCAACAAAATCTACACTTCCTCCGCCTCCGCCTCCTCCGACGTAGACGACACCGTTTCGCCTCCTCCCTCCTCCGTCTCGGAGCAGAACAAGAAAACGAATCAAAAACGACGAGTCAAAAACAAAAAGAAGAAAACAACGACAAGTCGCATCAGGATCAGCACGTCCTCCTTCGAAACCGGAATTTTCAGTAGCGAAGGCGGCGGCGGCTTGGACGAAGAAGAAACCGAAACCCTCGTCTCCACCAGATCTTCCAGAAGCTTCTCCACCGACTCATCCCCGCCACTTCCTCGCCGGAAAAAGAAAAAGAAGCGTGGCAGCAGCGCCGCGAAACGCAGCGTCTCGAGAAGGTCATCGGCAGAGATGGAAACGGCGGCGCCAGCTAGGCTGTCGGTGTTTCAGAGGCTGATACCGTGCACGGTGGAGGGGAAGGTGAGGGAGAGTTTCGCGGTGGTGAAGAAGTCGGAGGATCCGTACGAGGACTTCAAGAGGTCGATGATGGAGATGATTTTGGAGAAGCAGATGTTCGACGAGAGAGAGTTGGAGCAGTTGCTCCATTGTTTCTTGTCTCTGAACTCGAGGGAGCACCATGGGGTCATCGTTGAAGCTTTCGCCGAGATTTGGGAGGCTCTGTTCTGTTGCGCTTCTGGTAGTGCAAGATCATCATCTGGAGCAAGAGTTTCTAGAGCTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006355 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ovate

Protein Analysis

350

Amino Acids

39.36

Weight (kDa)

9.94

Isoelectric Point (pI)

71.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18500
fragaria_vesca	FvH4_1g13640
malus_domestica	MD02G1151100.v1.1 MD15G1265600.v1.1
prunus_persica	Prupe.7G152000_v2.0.a1
pyrus_communis	pycom15g23130
rosa_chinensis	RchiOBHm_Chr2g0101991
rosa_laevigata	RLG00000017124
rosa_multiflora	Rmu_co8434933.1_g000001
rosa_roxburghii	Rroxscaffold_2G00140860
rosa_rugosa	Rorug02G0103700
rosa_samantha	Rh2AG151800 Rh2BG157200 Rh2CG157200 Rh2DG157300
rosa_wichuraiana	Rw2G011850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	730
AccI	GTMKAC	2 cut(s)	339, 399
AccII	CGCG	2 cut(s)	683, 803
AclI	AACGTT	1 cut(s)	10
AclWI	GGATC	5 cut(s)	31, 228, 518, 818, 831
AcsI	RAATTY	1 cut(s)	537
AcvI	CACGTG	3 cut(s)	136, 214, 325
AcyI	GRCGYC	1 cut(s)	731
AfaI	GTAC	1 cut(s)	830
AfiI	CCNNNNNNNGG	1 cut(s)	975
AflIII	ACRYGT	1 cut(s)	213
AgsI	TTSAA	4 cut(s)	16, 63, 841, 959
AjiI	CACGTC	1 cut(s)	519
AloI	GAACNNNNNNTCC	2 cut(s)	971, 1003
AluBI	AGCT	4 cut(s)	615, 737, 962, 1043
AluI	AGCT	4 cut(s)	615, 737, 962, 1043
Alw21I	GWGCWC	3 cut(s)	773, 942, 1045
Alw26I	GTCTC	4 cut(s)	436, 598, 700, 927
Alw44I	GTGCAC	1 cut(s)	769
AlwI	GGATC	5 cut(s)	31, 228, 518, 818, 831
AlwNI	CAGNNNCTG	1 cut(s)	760
Ama87I	CYCGRG	3 cut(s)	30, 697, 931
ApaLI	GTGCAC	1 cut(s)	769
ApeKI	GCWGC	3 cut(s)	672, 675, 690
ApoI	RAATTY	1 cut(s)	537
ArsI	GACNNNNNNTTYG	2 cut(s)	576, 608
Asp700I	GAANNNNTTC	1 cut(s)	11
AspLEI	GCGC	3 cut(s)	680, 733, 998
AsuHPI	GGTGA	3 cut(s)	182, 799, 820
AsuII	TTCGAA	1 cut(s)	528
AvaI	CYCGRG	3 cut(s)	30, 697, 931
BaeGI	GKGCMC	1 cut(s)	773
BamHI	GGATCC	1 cut(s)	823
BanI	GGYRCC	1 cut(s)	730
BanII	GRGCYC	1 cut(s)	1045
BarI	GAAGNNNNNNTAC	2 cut(s)	821, 853
BbrPI	CACGTG	3 cut(s)	136, 214, 325
Bbv12I	GWGCWC	3 cut(s)	773, 942, 1045
BbvI	GCAGC	3 cut(s)	684, 687, 702
BccI	CCATC	5 cut(s)	195, 209, 291, 712, 847
BceAI	ACGGC	2 cut(s)	42, 741
BcoDI	GTCTC	4 cut(s)	436, 598, 700, 927
BfaI	CTAG	2 cut(s)	738, 1038
BfoI	RGCGCY	2 cut(s)	681, 734
BglI	GCCNNNNNGGC	1 cut(s)	739
BglII	AGATCT	1 cut(s)	602
BisI	GCNGC	9 cut(s)	275, 556, 559, 562, 673, 676, 681, 691, 729
BlsI	GCNGC	9 cut(s)	276, 557, 560, 563, 674, 677, 682, 692, 730
BmeT110I	CYCGRG	3 cut(s)	30, 697, 931
BmgBI	CACGTC	1 cut(s)	519
BmiI	GGNNCC	2 cut(s)	732, 825
BmsI	GCATC	2 cut(s)	237, 513
BpmI	CTGGAG	1 cut(s)	1044
Bpu14I	TTCGAA	1 cut(s)	528
BsaAI	YACGTR	3 cut(s)	136, 214, 325
BsaBI	GATNNNNATC	1 cut(s)	1018
BsaHI	GRCGYC	1 cut(s)	731
BsaJI	CCNNGG	2 cut(s)	333, 943
BsaWI	WCCGGW	1 cut(s)	533
Bsc4I	CCNNNNNNNGG	1 cut(s)	975
Bse8I	GATNNNNATC	1 cut(s)	1018
BseDI	CCNNGG	2 cut(s)	333, 943
BseGI	GGATG	1 cut(s)	629
BseJI	GATNNNNATC	1 cut(s)	1018
BseLI	CCNNNNNNNGG	1 cut(s)	975
BseRI	GAGGAG	4 cut(s)	187, 379, 408, 415
BseSI	GKGCMC	1 cut(s)	773
BseXI	GCAGC	3 cut(s)	684, 687, 702
BseYI	CCCAGC	1 cut(s)	145
Bsh1236I	CGCG	2 cut(s)	683, 803
Bsh1285I	CGRYCG	1 cut(s)	262
BshNI	GGYRCC	1 cut(s)	730
BsiEI	CGRYCG	1 cut(s)	262
BsiHKAI	GWGCWC	3 cut(s)	773, 942, 1045
BsiHKCI	CYCGRG	3 cut(s)	30, 697, 931
BsiSI	CCGG	2 cut(s)	534, 649
BsiWI	CGTACG	1 cut(s)	828
BslFI	GGGAC	1 cut(s)	80
BslI	CCNNNNNNNGG	1 cut(s)	975
BsmAI	GTCTC	4 cut(s)	436, 598, 700, 927
BsmBI	CGTCTC	3 cut(s)	436, 598, 700
BsmFI	GGGAC	1 cut(s)	80
BsoBI	CYCGRG	3 cut(s)	30, 697, 931
Bsp119I	TTCGAA	1 cut(s)	528
Bsp1286I	GDGCHC	3 cut(s)	773, 942, 1045
Bsp143I	GATC	7 cut(s)	36, 233, 269, 510, 602, 823, 1013
Bsp19I	CCATGG	1 cut(s)	943
BspFNI	CGCG	2 cut(s)	683, 803
BspLI	GGNNCC	2 cut(s)	732, 825
BspPI	GGATC	5 cut(s)	31, 228, 518, 818, 831
BspT104I	TTCGAA	1 cut(s)	528
BspT107I	GGYRCC	1 cut(s)	730
BssECI	CCNNGG	2 cut(s)	333, 943
BssMI	GATC	7 cut(s)	36, 233, 269, 510, 602, 823, 1013
BssNI	GRCGYC	1 cut(s)	731
BssT1I	CCWWGG	2 cut(s)	333, 943
Bst4CI	ACNGT	4 cut(s)	177, 409, 768, 775
BstACI	GRCGYC	1 cut(s)	731
BstBAI	YACGTR	3 cut(s)	136, 214, 325
BstBI	TTCGAA	1 cut(s)	528
BstC8I	GCNNGC	1 cut(s)	735
BstDEI	CTNAG	1 cut(s)	124
BstDSI	CCRYGG	1 cut(s)	943
BstF5I	GGATG	1 cut(s)	629
BstFNI	CGCG	2 cut(s)	683, 803
BstH2I	RGCGCY	2 cut(s)	681, 734
BstHHI	GCGC	3 cut(s)	680, 733, 998
BstKTI	GATC	7 cut(s)	39, 236, 272, 513, 605, 826, 1016
BstMAI	GTCTC	4 cut(s)	436, 598, 700, 927
BstMBI	GATC	7 cut(s)	36, 233, 269, 510, 602, 823, 1013
BstMCI	CGRYCG	1 cut(s)	262
BstMWI	GCNNNNNNNGC	4 cut(s)	555, 561, 734, 739
BstSLI	GKGCMC	1 cut(s)	773
BstUI	CGCG	2 cut(s)	683, 803
BstV1I	GCAGC	3 cut(s)	684, 687, 702
BstX2I	RGATCY	3 cut(s)	233, 602, 823
BstYI	RGATCY	3 cut(s)	233, 602, 823
BtgI	CCRYGG	1 cut(s)	943
BtrI	CACGTC	1 cut(s)	519
BtsCI	GGATG	1 cut(s)	629
Cac8I	GCNNGC	1 cut(s)	735
CaiI	CAGNNNCTG	1 cut(s)	760
CfoI	GCGC	3 cut(s)	680, 733, 998
CseI	GACGC	1 cut(s)	682
Csp6I	GTAC	1 cut(s)	829
CviAII	CATG	1 cut(s)	944
CviJI	RGCY	9 cut(s)	149, 564, 615, 737, 742, 760, 962, 983, 1043
CviKI_1	RGCY	9 cut(s)	149, 564, 615, 737, 742, 760, 962, 983, 1043
CviQI	GTAC	1 cut(s)	829
DdeI	CTNAG	1 cut(s)	124
DinI	GGCGCC	1 cut(s)	732
DpnI	GATC	7 cut(s)	38, 235, 271, 512, 604, 825, 1015
DpnII	GATC	7 cut(s)	36, 233, 269, 510, 602, 823, 1013
EciI	GGCGGA	2 cut(s)	367, 373
Ecl136II	GAGCTC	1 cut(s)	1043
Eco130I	CCWWGG	2 cut(s)	333, 943
Eco24I	GRGCYC	1 cut(s)	1045
Eco53kI	GAGCTC	1 cut(s)	1043
Eco72I	CACGTG	3 cut(s)	136, 214, 325
Eco88I	CYCGRG	3 cut(s)	30, 697, 931
EcoICRI	GAGCTC	1 cut(s)	1043
EcoT14I	CCWWGG	2 cut(s)	333, 943
EcoT38I	GRGCYC	1 cut(s)	1045
EgeI	GGCGCC	1 cut(s)	732
EheI	GGCGCC	1 cut(s)	732
ErhI	CCWWGG	2 cut(s)	333, 943
Esp3I	CGTCTC	3 cut(s)	436, 598, 700
FaeI	CATG	1 cut(s)	947
FaiI	YATR	2 cut(s)	291, 945
FaqI	GGGAC	1 cut(s)	80
FatI	CATG	1 cut(s)	943
FauI	CCCGC	1 cut(s)	642
FblI	GTMKAC	2 cut(s)	339, 399
Fnu4HI	GCNGC	9 cut(s)	275, 556, 559, 562, 673, 676, 681, 691, 729
FokI	GGATG	1 cut(s)	616
FriOI	GRGCYC	1 cut(s)	1045
Fsp4HI	GCNGC	9 cut(s)	275, 556, 559, 562, 673, 676, 681, 691, 729
FspBI	CTAG	2 cut(s)	738, 1038
GlaI	GCGC	3 cut(s)	679, 732, 997
GluI	GCNGC	9 cut(s)	275, 556, 559, 562, 673, 676, 681, 691, 729
GsaI	CCCAGC	1 cut(s)	149
GsuI	CTGGAG	1 cut(s)	1044
HaeII	RGCGCY	2 cut(s)	681, 734
HapII	CCGG	2 cut(s)	534, 649
HgaI	GACGC	1 cut(s)	682
HhaI	GCGC	3 cut(s)	680, 733, 998
Hin1I	GRCGYC	1 cut(s)	731
Hin1II	CATG	1 cut(s)	947
Hin6I	GCGC	3 cut(s)	678, 731, 996
HinP1I	GCGC	3 cut(s)	678, 731, 996
HincII	GTYRAC	1 cut(s)	130
HindII	GTYRAC	1 cut(s)	130
HindIII	AAGCTT	2 cut(s)	613, 960
HinfI	GANTC	4 cut(s)	24, 454, 468, 626
HpaII	CCGG	2 cut(s)	534, 649
HphI	GGTGA	3 cut(s)	182, 799, 820
Hpy166II	GTNNAC	5 cut(s)	130, 139, 340, 400, 771
Hpy188I	TCNGA	8 cut(s)	23, 233, 253, 394, 436, 756, 820, 927
Hpy8I	GTNNAC	5 cut(s)	130, 139, 340, 400, 771
Hpy99I	CGWCG	5 cut(s)	257, 260, 398, 468, 887
HpyAV	CCTTC	6 cut(s)	55, 108, 535, 545, 696, 778
HpyCH4III	ACNGT	4 cut(s)	177, 409, 768, 775
HpyCH4IV	ACGT	6 cut(s)	10, 135, 213, 324, 396, 518
HpyCH4V	TGCA	2 cut(s)	771, 1010
HpyF10VI	GCNNNNNNNGC	4 cut(s)	555, 561, 734, 739
HpyF3I	CTNAG	1 cut(s)	124
HpySE526I	ACGT	6 cut(s)	10, 135, 213, 324, 396, 518
Hsp92I	GRCGYC	1 cut(s)	731
Hsp92II	CATG	1 cut(s)	947
HspAI	GCGC	3 cut(s)	678, 731, 996
KasI	GGCGCC	1 cut(s)	730
Kzo9I	GATC	7 cut(s)	36, 233, 269, 510, 602, 823, 1013
LmnI	GCTCC	5 cut(s)	436, 898, 912, 937, 1025
Lsp1109I	GCAGC	3 cut(s)	684, 687, 702
LweI	GCATC	2 cut(s)	237, 513
MaeI	CTAG	2 cut(s)	738, 1038
MaeII	ACGT	6 cut(s)	10, 135, 213, 324, 396, 518
MalI	GATC	7 cut(s)	38, 235, 271, 512, 604, 825, 1015
MboI	GATC	7 cut(s)	36, 233, 269, 510, 602, 823, 1013
MboII	GAAGA	5 cut(s)	496, 584, 587, 597, 823
MflI	RGATCY	3 cut(s)	233, 602, 823
MhlI	GDGCHC	3 cut(s)	773, 942, 1045
MluCI	AATT	1 cut(s)	537
Mly113I	GGCGCC	1 cut(s)	731
MlyI	GAGTC	2 cut(s)	477, 620
MmeI	TCCRAC	4 cut(s)	276, 417, 798, 876
MroXI	GAANNNNTTC	1 cut(s)	11
MseI	TTAA	2 cut(s)	348, 1048
MspI	CCGG	2 cut(s)	534, 649
MvnI	CGCG	2 cut(s)	683, 803
MwoI	GCNNNNNNNGC	4 cut(s)	555, 561, 734, 739
NarI	GGCGCC	1 cut(s)	731
NcoI	CCATGG	1 cut(s)	943
NdeII	GATC	7 cut(s)	36, 233, 269, 510, 602, 823, 1013
NlaIII	CATG	1 cut(s)	947
NlaIV	GGNNCC	2 cut(s)	732, 825
NmeAIII	GCCGAG	1 cut(s)	994
NspV	TTCGAA	1 cut(s)	528
PaeR7I	CTCGAG	2 cut(s)	697, 931
PcsI	WCGNNNNNNNCGW	1 cut(s)	824
PdmI	GAANNNNTTC	1 cut(s)	11
PfeI	GAWTC	2 cut(s)	24, 454
Pfl23II	CGTACG	1 cut(s)	828
PkrI	GCNGC	9 cut(s)	276, 557, 560, 563, 674, 677, 682, 692, 730
PleI	GAGTC	2 cut(s)	476, 620
PluTI	GGCGCC	1 cut(s)	734
PmaCI	CACGTG	3 cut(s)	136, 214, 325
PmlI	CACGTG	3 cut(s)	136, 214, 325
PpsI	GAGTC	2 cut(s)	476, 620
Ppu21I	YACGTR	3 cut(s)	136, 214, 325
Psp124BI	GAGCTC	1 cut(s)	1045
Psp1406I	AACGTT	1 cut(s)	10
PspCI	CACGTG	3 cut(s)	136, 214, 325
PspFI	CCCAGC	1 cut(s)	145
PspLI	CGTACG	1 cut(s)	828
PspN4I	GGNNCC	2 cut(s)	732, 825
PspXI	VCTCGAGB	1 cut(s)	931
PstNI	CAGNNNCTG	1 cut(s)	760
PsuI	RGATCY	3 cut(s)	233, 602, 823
RsaI	GTAC	1 cut(s)	830
RsaNI	GTAC	1 cut(s)	829
SacI	GAGCTC	1 cut(s)	1045
SaqAI	TTAA	2 cut(s)	348, 1048
SatI	GCNGC	9 cut(s)	275, 556, 559, 562, 673, 676, 681, 691, 729
Sau3AI	GATC	7 cut(s)	36, 233, 269, 510, 602, 823, 1013
SchI	GAGTC	2 cut(s)	477, 620
SduI	GDGCHC	3 cut(s)	773, 942, 1045
SfaNI	GCATC	2 cut(s)	237, 513
SfoI	GGCGCC	1 cut(s)	732
Sfr274I	CTCGAG	2 cut(s)	697, 931
SfuI	TTCGAA	1 cut(s)	528
SlaI	CTCGAG	2 cut(s)	697, 931
SmlI	CTYRAG	2 cut(s)	697, 931
SmoI	CTYRAG	2 cut(s)	697, 931
Sse9I	AATT	1 cut(s)	537
SspDI	GGCGCC	1 cut(s)	730
SspMI	CTAG	2 cut(s)	738, 1038
SstI	GAGCTC	1 cut(s)	1045
StyI	CCWWGG	2 cut(s)	333, 943
TaaI	ACNGT	4 cut(s)	177, 409, 768, 775
TaiI	ACGT	6 cut(s)	13, 138, 216, 327, 399, 521
TaqI	TCGA	6 cut(s)	297, 528, 698, 848, 882, 932
TasI	AATT	1 cut(s)	537
TauI	GCSGC	6 cut(s)	277, 558, 561, 564, 683, 731
TfiI	GAWTC	2 cut(s)	24, 454
Tru1I	TTAA	2 cut(s)	348, 1048
Tru9I	TTAA	2 cut(s)	348, 1048
TseI	GCWGC	3 cut(s)	672, 675, 690
TspDTI	ATGAA	1 cut(s)	90
TspGWI	ACGGA	2 cut(s)	418, 816
VneI	GTGCAC	1 cut(s)	769
XapI	RAATTY	1 cut(s)	537
XbaI	TCTAGA	1 cut(s)	1037
XhoI	CTCGAG	2 cut(s)	697, 931
XmiI	GTMKAC	2 cut(s)	339, 399
XmnI	GAANNNNTTC	1 cut(s)	11
XspI	CTAG	2 cut(s)	738, 1038

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.