Prupe.7G166500_v2.0.a1

negative regulation of mRNA metabolic process

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0011510
Physical Location & Seq
Reverse (-)
17025990 .. 17032897
6908 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G166500.1

Sequence Viewer

Length: 2658 bp
ATGAGAACTCGCAATGCGGACACTCCGAAATCGGCGGCCAGCAAGAAAACACCGCCGGCCAGGAAAACCGCCGGTAAATCACAACCCGCGGCTTCTCAGTTGGACTTAGAAGCGGCCGCTCCTAAAACTGTCGAGACGAAACGCGTCTCTGCTGCTGACAGAGCTAAGCAAGTCAAGAAGACGGAGACTACACCCCCTACTGCTTCAAACTCTCAAAAATCATCAGTTGAGGAGGCTGAGGCATCAGCTGGTACTGCCAAGGTGACACCAGCCTCTAAAGTTGGTGTAGTGAATAAATTAGTTGCGAAAAAATCGCCTGGGAAAGCTAATACACCGGCATCAGCTAAATCTGTTTCATCACATACACGGAAAGCAGGGGGTTCGGTGAAGGCAAAAGTAGATGCGTTAAACAAGGAGAAAGTGGCAGATCTCAAGGATGCGGAGTCCACAAAGAAGACTCCCATTTCTGAGAATGATGGAAAGTCTGAAAAGGAGGAAAGCCATGTGGAATTTGAAGCATGCACTGTTGAGAATGTTGGAGAGCCTTCAAGGAAGGAAGAATCAGCTGTTGGAGGTCAAGAACCAGCTGTTGAGAAGGTTGAACAGCCAACAAACAAACAAAGCGCCAAGGAAGTAGAACCAGATCCTAATGAAAATGAAGAGGATCCTATTGAGGAAGAGGATCCTGTTGAAGAGGAGGATCCTTTTGAGGAGGAGCATCCTGTTGAGGAGGTGGATCCTATCAAGGAAGATGATCCAGTTGAGGCAGAAAAGTCTGTTGTTGGGGAGGTTGGAAAGTCTTCTGAGAATGAACCATATTATGATGTAAAAGAGGGAGTGGCAGTGAAAGGAGATCAGGAGGAGCCAATGGATAATGGTGATGAAGAGGGGACCCGTGTTGAGGCTGCTAACAAGGTAGAAAATGTCAAAGAGGGGTTACAAGAAGAAGATATTGAGGGTGTAAAAGATGTGTATGATGGTGATGAGCAGATGGACGAGTATGGTGAGAAAGTGGATCTTGGAGAACATGGAGAGGAGGAACTTCCAGAGGATGATGCAGAGGATCCTGCAGAAGAAACTGAGACATTGGAGGATAAGCAATTAACAGCCATTGCAAATGAACGCAAGATGAAGAAAGAACGAGAAATTTTTCTTGGGGGGCTTGATCGGGATGCTGTGGAGGAAGATGTGAGAAGGGTCTTTGAGAGGATTGGAGGGATAGTTGAAGTTAGGTTACACAAGAATACTTCAACTAATAAGAACAAGGGTTATGCATTTGTGGAGTTCGAAAATAAGGAGCTTGCAAGGCGTGCTTTGTCTGAAATGAAAAACCCTGTTATTCGAGGGAAGCGATGTGGGACAGCACCGAGTGAGGACAACGACACATTGTTCTTGGGTAATATCTGCAATACATGGACAAAGGAAGCTATTAAACAAAAATTGAAGGATTATGGTGTTGAAGGTGTTGAGAACATAAATCTTGTCCCAGATGTTCAACATTATGGGTTGAGCCGAGGTTTTGCATTTGTTGAATTCTCTTGTCATGGTGATGCTATGCTTGCATACAAGAGGCTTCAACAGCCCGATGCTATATTTGGTCACCTTGAAAGAACTGCCAAAGTGGCTTTTGCTGAACCTCTACGTGAGCCTGACCCAGAGATCATGTCCCAAGTGAAGTCGGTATTTGTGGATGGCCTGCCACCTCGTTGGGATGAGGACCAGGTTAGGGAGCAATTTAAATGCTATGGAGAAATCTTACGCATTGTTCTGGCACGGAATATGTCTACAGCCAAGCGGAAAGATTTTGGATTTGTTGATTTCTCAACCCATGAATCTGCTGTGGCCTGTGTTGATGGTATAAATAATATAGAACTGGCAGATGGAAACTCAAAGATAAAAGTGAAAGCAAGACTTTCAAATCCTTTGCCTAAAACTCAGGCTGTGAAGGGTGGAATGGCCGGTGGATTTCGAATTGGTGGTGATGGTGGTGGTGGTAGTGGTATCTTTCCAAGATTCGGGAGGGGTTTTGGTCGCGGTGGACATCATTTCAACCGTGCAAATTTCCAACGTGACAGACATTTCTATCATGGTGGACAAGGTCAAACTGGCAGGATGGGTTTCCCAAATGAATATGACTTTGATTACCCATATGATGAGTTTCATGGACGAGGGGGGAGAAGGGACCCTTTCATGGGTGGTCATTATCCATCTGCTGGAGGTTCATCATCAAGACCCTACATAGATGGACCCTGGCCAGGTGCCCCTGATAGAGGCTATGGTATGCATATTCCTCCTAGAAGGCTTCCATATTCTCCAGAAGGACATTTTGGCAGACCGCCAATGGGGGGTCATTTTGACAGACCGCCAATGGGGGGTCATTTTGATGAACCTTATTTTTATGATGATAACACACAAGGAATAAAACGTCCATTTCATATGAGAGACTATGATTATGATTACTTGGAGCCTAGTAGACGTCGCCCACGGTTGGATTATACTGATCCAACAGCTTCATTCCGTGGAAACCATTATAGTGATACTTATGGAGCTGGCAGTAGTCTCTACTCTCCTGATTATTATGGTCCTGAATATCATTCTGGTCCATATTCATCTTATTATGGGAGGAATCACTCATATAGAGGAGGCCACTACTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0006417 GO:0006950 GO:0006952 GO:0006955 GO:0007623 GO:0008143 GO:0008150 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0016020 GO:0017148 GO:0019219 GO:0019222 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031329 GO:0031330 GO:0032268 GO:0032269 GO:0032270 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034250 GO:0034341 GO:0036477 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0043489 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045087 GO:0045727 GO:0045934 GO:0048027 GO:0048255 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0070717 GO:0070887 GO:0070934 GO:0070937 GO:0071013 GO:0071204 GO:0071310 GO:0071345 GO:0071346 GO:0080090 GO:0090365 GO:0090367 GO:0097159 GO:0097447 GO:0097452 GO:0097458 GO:0120025 GO:0120038 GO:1901363 GO:1902369 GO:1902373 GO:1902494 GO:1903311 GO:1903312 GO:1990635 GO:1990904 GO:2000112 GO:2000113
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1

Protein Analysis

886

Amino Acids

98.08

Weight (kDa)

5.19

Isoelectric Point (pI)

53.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2479
AccB1I GGYRCC 1 cut(s) 2258
AccB7I CCANNNNNTGG 1 cut(s) 2213
AccBSI CCGCTC 1 cut(s) 119
AccI GTMKAC 2 cut(s) 1784, 2473
AccII CGCG 3 cut(s) 89, 144, 2034
AcoI YGGCCR 5 cut(s) 36, 57, 114, 1956, 2252
AcsI RAATTY 4 cut(s) 509, 1146, 1532, 2059
AcyI GRCGYC 1 cut(s) 2476
AdeI CACNNNGTG 1 cut(s) 1370
AfaI GTAC 1 cut(s) 253
AflIII ACRYGT 1 cut(s) 142
AjnI CCWGG 5 cut(s) 59, 316, 1719, 2249, 2254
AjuI GAANNNNNNNTTGG 6 cut(s) 552, 584, 1137, 1169, 2310, 2342
Alw26I GTCTC 6 cut(s) 128, 151, 179, 1076, 2436, 2564
AoxI GGCC 8 cut(s) 36, 57, 114, 1693, 1842, 1956, 2252, 2644
ApeKI GCWGC 2 cut(s) 152, 905
ApoI RAATTY 4 cut(s) 509, 1146, 1532, 2059
Asp700I GAANNNNTTC 2 cut(s) 799, 1149
AspLEI GCGC 1 cut(s) 626
AspS9I GGNCC 6 cut(s) 891, 1717, 2182, 2246, 2582, 2600
AsuHPI GGTGA 8 cut(s) 274, 397, 890, 992, 1016, 1559, 1592, 1991
AsuII TTCGAA 2 cut(s) 1287, 1969
AvaII GGWCC 6 cut(s) 891, 1717, 2182, 2246, 2582, 2600
BaeGI GKGCMC 1 cut(s) 2263
BalI TGGCCA 1 cut(s) 2254
BamHI GGATCC 5 cut(s) 664, 682, 700, 736, 1063
BanI GGYRCC 1 cut(s) 2258
BarI GAAGNNNNNNTAC 2 cut(s) 1218, 1250
BbsI GAAGAC 3 cut(s) 185, 461, 792
BbvCI CCTCAGC 1 cut(s) 237
BbvI GCAGC 2 cut(s) 139, 892
BcgI CGANNNNNNTGC 2 cut(s) 363, 397
BciT130I CCWGG 5 cut(s) 61, 318, 1721, 2251, 2256
BcoDI GTCTC 6 cut(s) 128, 151, 179, 1076, 2436, 2564
BfaI CTAG 2 cut(s) 2295, 2469
BfmI CTRYAG 2 cut(s) 1068, 1785
BfoI RGCGCY 1 cut(s) 627
BglI GCCNNNNNGGC 1 cut(s) 1622
BglII AGATCT 1 cut(s) 427
BisI GCNGC 6 cut(s) 36, 90, 114, 117, 153, 906
BlpI GCTNAGC 1 cut(s) 165
BlsI GCNGC 6 cut(s) 37, 91, 115, 118, 154, 907
Bme1390I CCNGG 5 cut(s) 61, 318, 1721, 2251, 2256
Bme18I GGWCC 6 cut(s) 891, 1717, 2182, 2246, 2582, 2600
BmgT120I GGNCC 6 cut(s) 891, 1717, 2182, 2246, 2582, 2600
BmrFI CCNGG 5 cut(s) 61, 318, 1721, 2251, 2256
BmsI GCATC 9 cut(s) 251, 347, 391, 427, 727, 1045, 1162, 1540, 1576
BpiI GAAGAC 3 cut(s) 185, 461, 792
BpmI CTGGAG 2 cut(s) 2235, 2298
Bpu10I CCTNAGC 1 cut(s) 237
Bpu1102I GCTNAGC 1 cut(s) 165
Bpu14I TTCGAA 2 cut(s) 1287, 1969
BpuEI CTTGAG 1 cut(s) 416
BsaAI YACGTR 1 cut(s) 1643
BsaHI GRCGYC 1 cut(s) 2476
BsaJI CCNNGG 8 cut(s) 87, 258, 317, 627, 1513, 2249, 2483, 2518
BsaXI ACNNNNNCTCC 4 cut(s) 828, 858, 1206, 1236
Bse118I RCCGGY 4 cut(s) 55, 71, 334, 1958
Bse1I ACTGG 3 cut(s) 758, 1878, 2110
Bse3DI GCAATG 2 cut(s) 19, 1110
BseBI CCWGG 5 cut(s) 61, 318, 1721, 2251, 2256
BseDI CCNNGG 8 cut(s) 87, 258, 317, 627, 1513, 2249, 2483, 2518
BseGI GGATG 7 cut(s) 442, 718, 1057, 1177, 1696, 1717, 2118
BseMI GCAATG 2 cut(s) 19, 1110
BseMII CTCAG 6 cut(s) 110, 228, 459, 795, 1071, 1949
BseNI ACTGG 3 cut(s) 758, 1878, 2110
BseRI GAGGAG 8 cut(s) 245, 710, 725, 728, 743, 875, 1049, 2655
BseSI GKGCMC 1 cut(s) 2263
BseX3I CGGCCG 1 cut(s) 114
BseXI GCAGC 2 cut(s) 139, 892
Bsh1236I CGCG 3 cut(s) 89, 144, 2034
Bsh1285I CGRYCG 1 cut(s) 117
BshFI GGCC 8 cut(s) 38, 59, 116, 1695, 1844, 1958, 2254, 2646
BshNI GGYRCC 1 cut(s) 2258
BsiEI CGRYCG 1 cut(s) 117
BsiSI CCGG 4 cut(s) 56, 72, 335, 1959
BslFI GGGAC 5 cut(s) 904, 1372, 1469, 1651, 2195
BsmAI GTCTC 6 cut(s) 128, 151, 179, 1076, 2436, 2564
BsmBI CGTCTC 2 cut(s) 128, 151
BsmFI GGGAC 5 cut(s) 904, 1372, 1469, 1651, 2195
BsnI GGCC 8 cut(s) 38, 59, 116, 1695, 1844, 1958, 2254, 2646
Bsp119I TTCGAA 2 cut(s) 1287, 1969
Bsp1286I GDGCHC 1 cut(s) 2263
Bsp1720I GCTNAGC 1 cut(s) 165
BspANI GGCC 8 cut(s) 38, 59, 116, 1695, 1844, 1958, 2254, 2646
BspCNI CTCAG 6 cut(s) 109, 229, 460, 796, 1072, 1948
BspFNI CGCG 3 cut(s) 89, 144, 2034
BspMAI CTGCAG 1 cut(s) 1072
BspT104I TTCGAA 2 cut(s) 1287, 1969
BspT107I GGYRCC 1 cut(s) 2258
BsrBI CCGCTC 1 cut(s) 119
BsrDI GCAATG 2 cut(s) 19, 1110
BsrFI RCCGGY 4 cut(s) 55, 71, 334, 1958
BsrI ACTGG 3 cut(s) 758, 1878, 2110
BssAI RCCGGY 4 cut(s) 55, 71, 334, 1958
BssECI CCNNGG 8 cut(s) 87, 258, 317, 627, 1513, 2249, 2483, 2518
BssNI GRCGYC 1 cut(s) 2476
BssT1I CCWWGG 2 cut(s) 258, 627
Bst2UI CCWGG 5 cut(s) 61, 318, 1721, 2251, 2256
Bst4CI ACNGT 4 cut(s) 130, 526, 2054, 2487
Bst6I CTCTTC 4 cut(s) 654, 672, 687, 879
BstACI GRCGYC 1 cut(s) 2476
BstAPI GCANNNNNTGC 1 cut(s) 1310
BstBAI YACGTR 1 cut(s) 1643
BstBI TTCGAA 2 cut(s) 1287, 1969
BstC8I GCNNGC 8 cut(s) 40, 57, 520, 1302, 1311, 1560, 1697, 2551
BstDEI CTNAG 8 cut(s) 96, 106, 165, 237, 468, 804, 1080, 1935
BstDSI CCRYGG 3 cut(s) 87, 2483, 2518
BstEII GGTNACC 1 cut(s) 1598
BstENI CCTNNNNNAGG 1 cut(s) 2268
BstF5I GGATG 7 cut(s) 442, 718, 1057, 1177, 1696, 1717, 2118
BstFNI CGCG 3 cut(s) 89, 144, 2034
BstH2I RGCGCY 1 cut(s) 627
BstHHI GCGC 1 cut(s) 626
BstMAI GTCTC 6 cut(s) 128, 151, 179, 1076, 2436, 2564
BstMCI CGRYCG 1 cut(s) 117
BstMWI GCNNNNNNNGC 7 cut(s) 161, 254, 1306, 1310, 1559, 1579, 1622
BstNI CCWGG 5 cut(s) 61, 318, 1721, 2251, 2256
BstNSI RCATGY 1 cut(s) 522
BstPI GGTNACC 1 cut(s) 1598
BstSCI CCNGG 5 cut(s) 59, 316, 1719, 2249, 2254
BstSFI CTRYAG 2 cut(s) 1068, 1785
BstSLI GKGCMC 1 cut(s) 2263
BstUI CGCG 3 cut(s) 89, 144, 2034
BstV1I GCAGC 2 cut(s) 139, 892
BstV2I GAAGAC 3 cut(s) 185, 461, 792
BstX2I RGATCY 8 cut(s) 427, 643, 664, 682, 700, 736, 1015, 1063
BstXI CCANNNNNNTGG 1 cut(s) 1707
BstYI RGATCY 8 cut(s) 427, 643, 664, 682, 700, 736, 1015, 1063
BstZI CGGCCG 1 cut(s) 114
BsuRI GGCC 8 cut(s) 38, 59, 116, 1695, 1844, 1958, 2254, 2646
BtgI CCRYGG 3 cut(s) 87, 2483, 2518
BtgZI GCGATG 1 cut(s) 1366
BtsCI GGATG 7 cut(s) 442, 718, 1057, 1177, 1696, 1717, 2118
BtsI GCAGTG 1 cut(s) 849
BtsIMutI CAGTG 2 cut(s) 522, 849
Cac8I GCNNGC 8 cut(s) 40, 57, 520, 1302, 1311, 1560, 1697, 2551
CciNI GCGGCCGC 1 cut(s) 114
CfoI GCGC 1 cut(s) 626
Cfr10I RCCGGY 4 cut(s) 55, 71, 334, 1958
Cfr13I GGNCC 6 cut(s) 891, 1717, 2182, 2246, 2582, 2600
Cfr42I CCGCGG 1 cut(s) 90
CseI GACGC 1 cut(s) 133
CsiI ACCWGGT 1 cut(s) 1719
Csp6I GTAC 1 cut(s) 252
CviQI GTAC 1 cut(s) 252
DdeI CTNAG 8 cut(s) 96, 106, 165, 237, 468, 804, 1080, 1935
DraI TTTAAA 1 cut(s) 1738
DraIII CACNNNGTG 1 cut(s) 1370
EaeI YGGCCR 5 cut(s) 36, 57, 114, 1956, 2252
EagI CGGCCG 1 cut(s) 114
Eam1104I CTCTTC 4 cut(s) 654, 672, 687, 879
EarI CTCTTC 4 cut(s) 654, 672, 687, 879
EclXI CGGCCG 1 cut(s) 114
Eco130I CCWWGG 2 cut(s) 258, 627
Eco47I GGWCC 6 cut(s) 891, 1717, 2182, 2246, 2582, 2600
Eco52I CGGCCG 1 cut(s) 114
Eco91I GGTNACC 1 cut(s) 1598
EcoNI CCTNNNNNAGG 1 cut(s) 2268
EcoO109I RGGNCCY 2 cut(s) 891, 2182
EcoO65I GGTNACC 1 cut(s) 1598
EcoRI GAATTC 1 cut(s) 1532
EcoRII CCWGG 5 cut(s) 59, 316, 1719, 2249, 2254
EcoT14I CCWWGG 2 cut(s) 258, 627
EcoT22I ATGCAT 2 cut(s) 1276, 2286
ErhI CCWWGG 2 cut(s) 258, 627
Esp3I CGTCTC 2 cut(s) 128, 151
FalI AAGNNNNNCTT 8 cut(s) 1002, 1034, 1297, 1329, 1896, 1928, 2170, 2202
FaqI GGGAC 5 cut(s) 904, 1372, 1469, 1651, 2195
FauI CCCGC 1 cut(s) 94
FauNDI CATATG 2 cut(s) 2149, 2436
FblI GTMKAC 2 cut(s) 1784, 2473
Fnu4HI GCNGC 6 cut(s) 36, 90, 114, 117, 153, 906
FokI GGATG 7 cut(s) 449, 705, 1064, 1184, 1703, 1724, 2125
Fsp4HI GCNGC 6 cut(s) 36, 90, 114, 117, 153, 906
FspBI CTAG 2 cut(s) 2295, 2469
GlaI GCGC 1 cut(s) 625
GluI GCNGC 6 cut(s) 36, 90, 114, 117, 153, 906
GsuI CTGGAG 2 cut(s) 2235, 2298
HaeII RGCGCY 1 cut(s) 627
HaeIII GGCC 8 cut(s) 38, 59, 116, 1695, 1844, 1958, 2254, 2646
HapII CCGG 4 cut(s) 56, 72, 335, 1959
HgaI GACGC 1 cut(s) 133
HhaI GCGC 1 cut(s) 626
Hin1I GRCGYC 1 cut(s) 2476
Hin6I GCGC 1 cut(s) 624
HinP1I GCGC 1 cut(s) 624
HinfI GANTC 6 cut(s) 443, 457, 560, 1832, 2013, 2626
HpaII CCGG 4 cut(s) 56, 72, 335, 1959
HphI GGTGA 8 cut(s) 274, 397, 890, 992, 1016, 1559, 1592, 1991
Hpy166II GTNNAC 5 cut(s) 447, 1785, 2039, 2093, 2474
Hpy188I TCNGA 5 cut(s) 27, 469, 487, 805, 1321
Hpy8I GTNNAC 5 cut(s) 447, 1785, 2039, 2093, 2474
Hpy99I CGWCG 1 cut(s) 2481
HpyCH4III ACNGT 4 cut(s) 130, 526, 2054, 2487
HpyCH4IV ACGT 4 cut(s) 1642, 2068, 2425, 2476
HpyF10VI GCNNNNNNNGC 7 cut(s) 161, 254, 1306, 1310, 1559, 1579, 1622
HpyF3I CTNAG 8 cut(s) 96, 106, 165, 237, 468, 804, 1080, 1935
HpySE526I ACGT 4 cut(s) 1642, 2068, 2425, 2476
Hsp92I GRCGYC 1 cut(s) 2476
HspAI GCGC 1 cut(s) 624
KflI GGGWCCC 2 cut(s) 891, 2182
KroI GCCGGC 1 cut(s) 55
KroNI GCCGGC 1 cut(s) 57
KspI CCGCGG 1 cut(s) 90
LmnI GCTCC 7 cut(s) 124, 715, 862, 1297, 1729, 2464, 2546
Lsp1109I GCAGC 2 cut(s) 139, 892
LweI GCATC 9 cut(s) 251, 347, 391, 427, 727, 1045, 1162, 1540, 1576
MabI ACCWGGT 1 cut(s) 1719
MaeI CTAG 2 cut(s) 2295, 2469
MaeII ACGT 4 cut(s) 1642, 2068, 2425, 2476
MaeIII GTNAC 5 cut(s) 262, 936, 1233, 1598, 2069
MbiI CCGCTC 1 cut(s) 119
MflI RGATCY 8 cut(s) 427, 643, 664, 682, 700, 736, 1015, 1063
MhlI GDGCHC 1 cut(s) 2263
MlsI TGGCCA 1 cut(s) 2254
MluCI AATT 9 cut(s) 296, 509, 1100, 1146, 1439, 1532, 1733, 1971, 2059
MluI ACGCGT 1 cut(s) 142
MluNI TGGCCA 1 cut(s) 2254
MlyI GAGTC 2 cut(s) 451, 452
MmeI TCCRAC 7 cut(s) 81, 517, 550, 772, 2089, 2469, 2528
Mox20I TGGCCA 1 cut(s) 2254
Mph1103I ATGCAT 2 cut(s) 1276, 2286
MroNI GCCGGC 1 cut(s) 55
MroXI GAANNNNTTC 2 cut(s) 799, 1149
MscI TGGCCA 1 cut(s) 2254
MseI TTAA 4 cut(s) 407, 1103, 1431, 1737
MslI CAYNNNNRTG 3 cut(s) 1548, 2382, 2532
Msp20I TGGCCA 1 cut(s) 2254
MspA1I CMGCKG 4 cut(s) 89, 248, 566, 587
MspI CCGG 4 cut(s) 56, 72, 335, 1959
MspR9I CCNGG 5 cut(s) 61, 318, 1721, 2251, 2256
MvaI CCWGG 5 cut(s) 61, 318, 1721, 2251, 2256
MvnI CGCG 3 cut(s) 89, 144, 2034
MwoI GCNNNNNNNGC 7 cut(s) 161, 254, 1306, 1310, 1559, 1579, 1622
NaeI GCCGGC 1 cut(s) 57
NdeI CATATG 2 cut(s) 2149, 2436
NgoMIV GCCGGC 1 cut(s) 55
NmeAIII GCCGAG 1 cut(s) 1538
NmuCI GTSAC 3 cut(s) 262, 1598, 2069
NotI GCGGCCGC 1 cut(s) 114
NsiI ATGCAT 2 cut(s) 1276, 2286
NspI RCATGY 1 cut(s) 522
NspV TTCGAA 2 cut(s) 1287, 1969
PaeI GCATGC 1 cut(s) 522
PcsI WCGNNNNNNNCGW 1 cut(s) 1348
PdiI GCCGGC 1 cut(s) 57
PdmI GAANNNNTTC 2 cut(s) 799, 1149
PfeI GAWTC 4 cut(s) 560, 1832, 2013, 2626
PflFI GACNNNGTC 1 cut(s) 2097
PflMI CCANNNNNTGG 1 cut(s) 2213
PkrI GCNGC 6 cut(s) 37, 91, 115, 118, 154, 907
PleI GAGTC 2 cut(s) 451, 451
PpsI GAGTC 2 cut(s) 451, 451
Ppu21I YACGTR 1 cut(s) 1643
PpuMI RGGWCCY 2 cut(s) 891, 2182
Psp5II RGGWCCY 2 cut(s) 891, 2182
Psp6I CCWGG 5 cut(s) 59, 316, 1719, 2249, 2254
PspEI GGTNACC 1 cut(s) 1598
PspGI CCWGG 5 cut(s) 59, 316, 1719, 2249, 2254
PspPI GGNCC 6 cut(s) 891, 1717, 2182, 2246, 2582, 2600
PspPPI RGGWCCY 2 cut(s) 891, 2182
PstI CTGCAG 1 cut(s) 1072
PsuI RGATCY 8 cut(s) 427, 643, 664, 682, 700, 736, 1015, 1063
PsyI GACNNNGTC 1 cut(s) 2097
PvuII CAGCTG 3 cut(s) 248, 566, 587
RsaI GTAC 1 cut(s) 253
RsaNI GTAC 1 cut(s) 252
RseI CAYNNNNRTG 3 cut(s) 1548, 2382, 2532
SacII CCGCGG 1 cut(s) 90
SaqAI TTAA 4 cut(s) 407, 1103, 1431, 1737
SatI GCNGC 6 cut(s) 36, 90, 114, 117, 153, 906
Sau96I GGNCC 6 cut(s) 891, 1717, 2182, 2246, 2582, 2600
SchI GAGTC 2 cut(s) 451, 452
ScrFI CCNGG 5 cut(s) 61, 318, 1721, 2251, 2256
SduI GDGCHC 1 cut(s) 2263
SexAI ACCWGGT 1 cut(s) 1719
SfaNI GCATC 9 cut(s) 251, 347, 391, 427, 727, 1045, 1162, 1540, 1576
SfcI CTRYAG 2 cut(s) 1068, 1785
Sfr303I CCGCGG 1 cut(s) 90
SfuI TTCGAA 2 cut(s) 1287, 1969
SgrBI CCGCGG 1 cut(s) 90
SinI GGWCC 6 cut(s) 891, 1717, 2182, 2246, 2582, 2600
SmiI ATTTAAAT 1 cut(s) 1738
SmiMI CAYNNNNRTG 3 cut(s) 1548, 2382, 2532
SmlI CTYRAG 1 cut(s) 431
SmoI CTYRAG 1 cut(s) 431
SphI GCATGC 1 cut(s) 522
Sse9I AATT 9 cut(s) 296, 509, 1100, 1146, 1439, 1532, 1733, 1971, 2059
SspMI CTAG 2 cut(s) 2295, 2469
StyD4I CCNGG 5 cut(s) 59, 316, 1719, 2249, 2254
StyI CCWWGG 2 cut(s) 258, 627
SwaI ATTTAAAT 1 cut(s) 1738
TaaI ACNGT 4 cut(s) 130, 526, 2054, 2487
TaiI ACGT 4 cut(s) 1645, 2071, 2428, 2479
TaqI TCGA 4 cut(s) 132, 1287, 1342, 1969
TasI AATT 9 cut(s) 296, 509, 1100, 1146, 1439, 1532, 1733, 1971, 2059
TauI GCSGC 4 cut(s) 38, 92, 116, 119
TfiI GAWTC 4 cut(s) 560, 1832, 2013, 2626
Tru1I TTAA 4 cut(s) 407, 1103, 1431, 1737
Tru9I TTAA 4 cut(s) 407, 1103, 1431, 1737
TscAI CASTG 2 cut(s) 529, 849
TseFI GTSAC 3 cut(s) 262, 1598, 2069
TseI GCWGC 2 cut(s) 152, 905
Tsp45I GTSAC 3 cut(s) 262, 1598, 2069
TspGWI ACGGA 4 cut(s) 197, 382, 1789, 2507
TspRI CASTG 2 cut(s) 529, 849
Tth111I GACNNNGTC 1 cut(s) 2097
Van91I CCANNNNNTGG 1 cut(s) 2213
VpaK11BI GGWCC 6 cut(s) 891, 1717, 2182, 2246, 2582, 2600
XagI CCTNNNNNAGG 1 cut(s) 2268
XapI RAATTY 4 cut(s) 509, 1146, 1532, 2059
XceI RCATGY 1 cut(s) 522
XmiI GTMKAC 2 cut(s) 1784, 2473
XmnI GAANNNNTTC 2 cut(s) 799, 1149
XspI CTAG 2 cut(s) 2295, 2469
ZraI GACGTC 1 cut(s) 2477
Zsp2I ATGCAT 2 cut(s) 1276, 2286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.