Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009509

Physical Location & Seq

Genomic Coordinates Reverse (-)

17726939 .. 17730364

Gene Structure 3426 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G181600.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1026 bp

ATGGATTCCAGTGACTGTGAACCCCATTTGCTGAGATCTCTCTTAGTCTTCAAGAACACCATCAACCAAGCTTTTTTTTTTTTTTTTTTTTTGGTTGGGTTTTTGATAGAGTTGATCAGGAGCTTGCATGTGTACCGATTAGATGAGGGGAAGGAAAATGAGGTTGAGAGGGAGTTCGTGTTGTCCGCCAGTGAGCCATATGTGGAGTTACCAGCTGACCCGCTTCTTAGATTGATGAAATTTCCAGTTTCCCAAGTGCACGAAGGACATGTCAATGGTTGTTGGGTTTGCATATTTGCATTTCAGGCCAATTTTCCTCCTAATTTTACATGCATTCCTTCCATACTTTCAGTCTCCAGAAATCGGAAGTTGAAGTCGATTCCAGCTTTGGCTAATGATCTTCAGATGATTTTCGAGTTGAGCAACAAAAAACCATTGCAAAGGTCAGGGGAGGAAACATGCCAAGGGAGTAATGACAATAACCATCAACTAATAAGAAGTTCGCCCATACTTGATCTGGATCTTAACAGTCTTCCATGTCCTGTCCCAATGTCCGAATCGTCTGAGGATCAAGAAATTGGAAGAAGTTTACCAGGTATTATGGAGAAGAAGAAGAAAAGGGCACCAAGTGAACATGTAGCGAATATCGCTTTATCAGATCTGGCCAAGTATTTTGATCTCCCAATTGTGGAAGCTTCGAGAAATCTGAATGTTGGACTTACAGTACTTAAAAAGAAATGTAGAGAATTTGGTATTCCTCGGTGGCCACATAGGAAAATTAAATCGCTTGATGGTCTCATTCGTGATCTTCAGGAAGAGACAGAGATTCAACAGCAGGAAAACCAGGCTGCAGCCTTGGCTGTTGCAAAGAGGCAAAGGATGTTGGAGAATGAAAAAGAAAGTATAGAGAGGAAACCCTTCTTGGAGATGAAGACCGAGACCAAGAAGTTCAGGCAAGATGTTTTCAAGAGAAGGCATAGAGCTAGACTTCTCAGAAGCCAGGGCCTATCGAACTCTGACAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005968 GO:0008150 GO:0009889 GO:0009893 GO:0010556 GO:0010604 GO:0017016 GO:0017137 GO:0019222 GO:0019899 GO:0031267 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0032991 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051020 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0080090 GO:1902494 GO:1990234 GO:2000112 GO:2000539 GO:2000541

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GDI

Protein Analysis

342

Amino Acids

39.19

Weight (kDa)

8.6

Isoelectric Point (pI)

57.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009509)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35590 AT4G35590
fragaria_vesca	FvH4_1g10460 FvH4_1g10460
malus_domestica	MD02G1117800.v1.1 MD15G1232500.v1.1
prunus_persica	Prupe.7G181600_v2.0.a1 Prupe.7G181600_v2.0.a1 Prupe.7G181600_v2.0.a1 Prupe.7G181600_v2.0.a1 Prupe.7G181600_v2.0.a1
pyrus_communis	pycom02g09120 pycom15g20690
rosa_chinensis	RchiOBHm_Chr2g0097321
rosa_laevigata	RLG00000016717
rosa_roxburghii	Rroxscaffold_2G00144780
rosa_rugosa	Rorug02G0065800
rosa_samantha	Rh2AG112500 Rh2BG115200 Rh2CG117300 Rh2DG116500
rosa_wichuraiana	Rw2G008800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	622
AciI	CCGC	2 cut(s)	186, 221
AclWI	GGATC	2 cut(s)	528, 576
AcoI	YGGCCR	2 cut(s)	663, 764
AcsI	RAATTY	2 cut(s)	239, 746
AcuI	CTGAAG	2 cut(s)	386, 794
AdeI	CACNNNGTG	1 cut(s)	629
AfaI	GTAC	2 cut(s)	134, 726
AfiI	CCNNNNNNNGG	2 cut(s)	363, 688
AflIII	ACRYGT	2 cut(s)	268, 634
AgsI	TTSAA	4 cut(s)	52, 373, 830, 967
AjnI	CCWGG	3 cut(s)	592, 843, 999
AjuI	GAANNNNNNNTTGG	2 cut(s)	905, 937
AluBI	AGCT	6 cut(s)	71, 123, 215, 386, 695, 983
AluI	AGCT	6 cut(s)	71, 123, 215, 386, 695, 983
Alw21I	GWGCWC	1 cut(s)	261
Alw26I	GTCTC	4 cut(s)	358, 800, 812, 932
Alw44I	GTGCAC	1 cut(s)	257
AlwI	GGATC	2 cut(s)	528, 576
AlwNI	CAGNNNCTG	1 cut(s)	15
AoxI	GGCC	4 cut(s)	306, 663, 764, 1003
ApaLI	GTGCAC	1 cut(s)	257
ApeKI	GCWGC	2 cut(s)	848, 851
ApoI	RAATTY	2 cut(s)	239, 746
ArsI	GACNNNNNNTTYG	2 cut(s)	255, 287
Asp700I	GAANNNNTTC	1 cut(s)	917
AspS9I	GGNCC	1 cut(s)	1003
BaeGI	GKGCMC	2 cut(s)	261, 625
BalI	TGGCCA	2 cut(s)	665, 766
BanI	GGYRCC	1 cut(s)	622
BbsI	GAAGAC	3 cut(s)	40, 524, 938
Bbv12I	GWGCWC	1 cut(s)	261
BbvI	GCAGC	2 cut(s)	835, 863
BccI	CCATC	3 cut(s)	68, 492, 785
BciT130I	CCWGG	3 cut(s)	594, 845, 1001
BclI	TGATCA	1 cut(s)	114
BcoDI	GTCTC	4 cut(s)	358, 800, 812, 932
BfaI	CTAG	1 cut(s)	984
BfmI	CTRYAG	1 cut(s)	849
BglII	AGATCT	2 cut(s)	35, 658
BisI	GCNGC	2 cut(s)	849, 852
BlsI	GCNGC	2 cut(s)	850, 853
BmcAI	AGTACT	1 cut(s)	726
Bme1390I	CCNGG	3 cut(s)	594, 845, 1001
BmgT120I	GGNCC	1 cut(s)	1003
BmiI	GGNNCC	1 cut(s)	624
BmrFI	CCNGG	3 cut(s)	594, 845, 1001
BpiI	GAAGAC	3 cut(s)	40, 524, 938
BpmI	CTGGAG	1 cut(s)	340
BsaBI	GATNNNNATC	1 cut(s)	519
BsaI	GGTCTC	2 cut(s)	800, 932
BsaJI	CCNNGG	4 cut(s)	463, 758, 855, 1000
BsaXI	ACNNNNNCTCC	2 cut(s)	164, 194
Bsc4I	CCNNNNNNNGG	2 cut(s)	363, 688
Bse1I	ACTGG	3 cut(s)	9, 189, 245
Bse3DI	GCAATG	1 cut(s)	434
Bse8I	GATNNNNATC	1 cut(s)	519
BseBI	CCWGG	3 cut(s)	594, 845, 1001
BseDI	CCNNGG	4 cut(s)	463, 758, 855, 1000
BseGI	GGATG	1 cut(s)	885
BseJI	GATNNNNATC	1 cut(s)	519
BseLI	CCNNNNNNNGG	2 cut(s)	363, 688
BseMI	GCAATG	1 cut(s)	434
BseMII	CTCAG	3 cut(s)	23, 555, 1006
BseNI	ACTGG	3 cut(s)	9, 189, 245
BseSI	GKGCMC	2 cut(s)	261, 625
BseXI	GCAGC	2 cut(s)	835, 863
BshFI	GGCC	4 cut(s)	308, 665, 766, 1005
BshNI	GGYRCC	1 cut(s)	622
BsiHKAI	GWGCWC	1 cut(s)	261
BslFI	GGGAC	1 cut(s)	530
BslI	CCNNNNNNNGG	2 cut(s)	363, 688
BsmAI	GTCTC	4 cut(s)	358, 800, 812, 932
BsmFI	GGGAC	1 cut(s)	530
BsmI	GAATGC	1 cut(s)	333
BsnI	GGCC	4 cut(s)	308, 665, 766, 1005
Bso31I	GGTCTC	2 cut(s)	800, 932
Bsp1286I	GDGCHC	2 cut(s)	261, 625
Bsp143I	GATC	9 cut(s)	35, 114, 397, 514, 520, 568, 658, 676, 805
BspACI	CCGC	2 cut(s)	186, 221
BspANI	GGCC	4 cut(s)	308, 665, 766, 1005
BspCNI	CTCAG	3 cut(s)	24, 556, 1005
BspLI	GGNNCC	1 cut(s)	624
BspMAI	CTGCAG	1 cut(s)	853
BspPI	GGATC	2 cut(s)	528, 576
BspT107I	GGYRCC	1 cut(s)	622
BspTNI	GGTCTC	2 cut(s)	800, 932
BsrDI	GCAATG	1 cut(s)	434
BsrI	ACTGG	3 cut(s)	9, 189, 245
BssECI	CCNNGG	4 cut(s)	463, 758, 855, 1000
BssMI	GATC	9 cut(s)	35, 114, 397, 514, 520, 568, 658, 676, 805
BssT1I	CCWWGG	2 cut(s)	463, 855
Bst2UI	CCWGG	3 cut(s)	594, 845, 1001
Bst4CI	ACNGT	3 cut(s)	17, 530, 724
Bst6I	CTCTTC	1 cut(s)	810
BstC8I	GCNNGC	1 cut(s)	125
BstDEI	CTNAG	5 cut(s)	32, 43, 227, 564, 992
BstF5I	GGATG	1 cut(s)	885
BstKTI	GATC	9 cut(s)	38, 117, 400, 517, 523, 571, 661, 679, 808
BstMAI	GTCTC	4 cut(s)	358, 800, 812, 932
BstMBI	GATC	9 cut(s)	35, 114, 397, 514, 520, 568, 658, 676, 805
BstMWI	GCNNNNNNNGC	3 cut(s)	305, 647, 857
BstNI	CCWGG	3 cut(s)	594, 845, 1001
BstNSI	RCATGY	5 cut(s)	131, 272, 333, 462, 638
BstSCI	CCNGG	3 cut(s)	592, 843, 999
BstSFI	CTRYAG	1 cut(s)	849
BstSLI	GKGCMC	2 cut(s)	261, 625
BstV1I	GCAGC	2 cut(s)	835, 863
BstV2I	GAAGAC	3 cut(s)	40, 524, 938
BstX2I	RGATCY	3 cut(s)	35, 520, 658
BstYI	RGATCY	3 cut(s)	35, 520, 658
BsuRI	GGCC	4 cut(s)	308, 665, 766, 1005
BtsCI	GGATG	1 cut(s)	885
BtsIMutI	CAGTG	2 cut(s)	16, 196
Cac8I	GCNNGC	1 cut(s)	125
CaiI	CAGNNNCTG	1 cut(s)	15
Cfr13I	GGNCC	1 cut(s)	1003
CsiI	ACCWGGT	1 cut(s)	592
Csp6I	GTAC	2 cut(s)	133, 725
CviAII	CATG	6 cut(s)	128, 269, 330, 459, 537, 635
CviQI	GTAC	2 cut(s)	133, 725
DdeI	CTNAG	5 cut(s)	32, 43, 227, 564, 992
DpnI	GATC	9 cut(s)	37, 116, 399, 516, 522, 570, 660, 678, 807
DpnII	GATC	9 cut(s)	35, 114, 397, 514, 520, 568, 658, 676, 805
DraIII	CACNNNGTG	1 cut(s)	629
EaeI	YGGCCR	2 cut(s)	663, 764
Eam1104I	CTCTTC	1 cut(s)	810
EarI	CTCTTC	1 cut(s)	810
EciI	GGCGGA	1 cut(s)	175
Eco130I	CCWWGG	2 cut(s)	463, 855
Eco31I	GGTCTC	2 cut(s)	800, 932
Eco57I	CTGAAG	2 cut(s)	386, 794
EcoO109I	RGGNCCY	1 cut(s)	1003
EcoRII	CCWGG	3 cut(s)	592, 843, 999
EcoT14I	CCWWGG	2 cut(s)	463, 855
EcoT22I	ATGCAT	1 cut(s)	335
ErhI	CCWWGG	2 cut(s)	463, 855
FaeI	CATG	6 cut(s)	131, 272, 333, 462, 540, 638
FaqI	GGGAC	1 cut(s)	530
FatI	CATG	6 cut(s)	127, 268, 329, 458, 536, 634
FauI	CCCGC	1 cut(s)	228
FauNDI	CATATG	1 cut(s)	199
FbaI	TGATCA	1 cut(s)	114
Fnu4HI	GCNGC	2 cut(s)	849, 852
FokI	GGATG	1 cut(s)	892
Fsp4HI	GCNGC	2 cut(s)	849, 852
FspBI	CTAG	1 cut(s)	984
GluI	GCNGC	2 cut(s)	849, 852
GsuI	CTGGAG	1 cut(s)	340
HaeIII	GGCC	4 cut(s)	308, 665, 766, 1005
Hin1II	CATG	6 cut(s)	131, 272, 333, 462, 540, 638
HindIII	AAGCTT	2 cut(s)	69, 693
HinfI	GANTC	4 cut(s)	5, 379, 557, 826
Hpy166II	GTNNAC	5 cut(s)	20, 133, 259, 590, 632
Hpy188I	TCNGA	8 cut(s)	366, 405, 556, 565, 658, 708, 995, 1018
Hpy188III	TCNNGA	9 cut(s)	52, 118, 357, 518, 572, 699, 803, 812, 967
Hpy8I	GTNNAC	5 cut(s)	20, 133, 259, 590, 632
HpyAV	CCTTC	5 cut(s)	145, 257, 348, 928, 966
HpyCH4III	ACNGT	3 cut(s)	17, 530, 724
HpyCH4V	TGCA	8 cut(s)	127, 259, 291, 299, 333, 439, 851, 866
HpyF10VI	GCNNNNNNNGC	3 cut(s)	305, 647, 857
HpyF3I	CTNAG	5 cut(s)	32, 43, 227, 564, 992
Hsp92II	CATG	6 cut(s)	131, 272, 333, 462, 540, 638
Ksp22I	TGATCA	1 cut(s)	114
Kzo9I	GATC	9 cut(s)	35, 114, 397, 514, 520, 568, 658, 676, 805
LmnI	GCTCC	1 cut(s)	120
Lsp1109I	GCAGC	2 cut(s)	835, 863
MabI	ACCWGGT	1 cut(s)	592
MaeI	CTAG	1 cut(s)	984
MaeIII	GTNAC	2 cut(s)	11, 207
MalI	GATC	9 cut(s)	37, 116, 399, 516, 522, 570, 660, 678, 807
MboI	GATC	9 cut(s)	35, 114, 397, 514, 520, 568, 658, 676, 805
MfeI	CAATTG	1 cut(s)	684
MflI	RGATCY	3 cut(s)	35, 520, 658
MhlI	GDGCHC	2 cut(s)	261, 625
MlsI	TGGCCA	2 cut(s)	665, 766
MluCI	AATT	8 cut(s)	239, 310, 322, 576, 684, 746, 777, 1021
MluNI	TGGCCA	2 cut(s)	665, 766
MmeI	TCCRAC	2 cut(s)	694, 864
MnlI	CCTC	9 cut(s)	139, 154, 162, 327, 445, 559, 768, 864, 903
Mox20I	TGGCCA	2 cut(s)	665, 766
Mph1103I	ATGCAT	1 cut(s)	335
MroXI	GAANNNNTTC	1 cut(s)	917
MscI	TGGCCA	2 cut(s)	665, 766
MseI	TTAA	3 cut(s)	525, 729, 780
MslI	CAYNNNNRTG	1 cut(s)	273
Msp20I	TGGCCA	2 cut(s)	665, 766
MspA1I	CMGCKG	1 cut(s)	215
MspR9I	CCNGG	3 cut(s)	594, 845, 1001
MunI	CAATTG	1 cut(s)	684
Mva1269I	GAATGC	1 cut(s)	333
MvaI	CCWGG	3 cut(s)	594, 845, 1001
MwoI	GCNNNNNNNGC	3 cut(s)	305, 647, 857
NdeI	CATATG	1 cut(s)	199
NdeII	GATC	9 cut(s)	35, 114, 397, 514, 520, 568, 658, 676, 805
NlaIII	CATG	6 cut(s)	131, 272, 333, 462, 540, 638
NlaIV	GGNNCC	1 cut(s)	624
NmuCI	GTSAC	1 cut(s)	11
NsiI	ATGCAT	1 cut(s)	335
NspI	RCATGY	5 cut(s)	131, 272, 333, 462, 638
PciI	ACATGT	2 cut(s)	268, 634
PctI	GAATGC	1 cut(s)	333
PdmI	GAANNNNTTC	1 cut(s)	917
PfeI	GAWTC	4 cut(s)	5, 379, 557, 826
PkrI	GCNGC	2 cut(s)	850, 853
PscI	ACATGT	2 cut(s)	268, 634
Psp6I	CCWGG	3 cut(s)	592, 843, 999
PspGI	CCWGG	3 cut(s)	592, 843, 999
PspN4I	GGNNCC	1 cut(s)	624
PspPI	GGNCC	1 cut(s)	1003
PstI	CTGCAG	1 cut(s)	853
PstNI	CAGNNNCTG	1 cut(s)	15
PsuI	RGATCY	3 cut(s)	35, 520, 658
PvuII	CAGCTG	1 cut(s)	215
RsaI	GTAC	2 cut(s)	134, 726
RsaNI	GTAC	2 cut(s)	133, 725
RseI	CAYNNNNRTG	1 cut(s)	273
SaqAI	TTAA	3 cut(s)	525, 729, 780
SatI	GCNGC	2 cut(s)	849, 852
Sau3AI	GATC	9 cut(s)	35, 114, 397, 514, 520, 568, 658, 676, 805
Sau96I	GGNCC	1 cut(s)	1003
ScaI	AGTACT	1 cut(s)	726
ScrFI	CCNGG	3 cut(s)	594, 845, 1001
SduI	GDGCHC	2 cut(s)	261, 625
SetI	ASST	9 cut(s)	73, 125, 165, 217, 388, 446, 598, 697, 985
SexAI	ACCWGGT	1 cut(s)	592
SfcI	CTRYAG	1 cut(s)	849
SmiMI	CAYNNNNRTG	1 cut(s)	273
Sse9I	AATT	8 cut(s)	239, 310, 322, 576, 684, 746, 777, 1021
SsiI	CCGC	2 cut(s)	186, 221
SspMI	CTAG	1 cut(s)	984
StyD4I	CCNGG	3 cut(s)	592, 843, 999
StyI	CCWWGG	2 cut(s)	463, 855
TaaI	ACNGT	3 cut(s)	17, 530, 724
TaqI	TCGA	4 cut(s)	377, 414, 698, 1010
TaqII	GACCGA	1 cut(s)	950
TasI	AATT	8 cut(s)	239, 310, 322, 576, 684, 746, 777, 1021
TatI	WGTACW	1 cut(s)	724
TfiI	GAWTC	4 cut(s)	5, 379, 557, 826
Tru1I	TTAA	3 cut(s)	525, 729, 780
Tru9I	TTAA	3 cut(s)	525, 729, 780
TscAI	CASTG	2 cut(s)	16, 196
TseFI	GTSAC	1 cut(s)	11
TseI	GCWGC	2 cut(s)	848, 851
Tsp45I	GTSAC	1 cut(s)	11
TspDTI	ATGAA	3 cut(s)	251, 906, 944
TspRI	CASTG	2 cut(s)	16, 196
VneI	GTGCAC	1 cut(s)	257
XapI	RAATTY	2 cut(s)	239, 746
XceI	RCATGY	5 cut(s)	131, 272, 333, 462, 638
XcmI	CCANNNNNNNNNTGG	1 cut(s)	514
XmnI	GAANNNNTTC	1 cut(s)	917
XspI	CTAG	1 cut(s)	984
ZrmI	AGTACT	1 cut(s)	726
Zsp2I	ATGCAT	1 cut(s)	335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.