Prupe.7G183400_v2.0.a1
NAC Family

GPI-GlcNAc transferase complex, PIG-H component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0011274
Physical Location & Seq
Forward (+)
17809266 .. 17812107
2842 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G183400.1

Sequence Viewer

Length: 552 bp
ATGGTGGGTTCATCAACTAATTCAAGATATAAATATTTACATGATTGTAAGTGGCCTCGTGAAGCAGTTGACGTGCACCACATCATTGTTAGAAAGAGTGGTGCAAAGGGTTTCTTTGTATACTTCTTCGCTCTCATTATTCTAGCTACCGCCTTCTACCTTTTCTTGGTTAAGGAGAAATCAGTGATCATTGTTTTATGGAGTCTCTTGTTAGATGCATTCCTTGTAAAGTTGCTTCGGAAGAGTGTTGAGAAAGAGTCCGTTGTGGTTATGCCAGCCTTTGGAGTTCAACTAGAAACTCACTATGTGAGTGGAAAGATTATTCGTCGGTTCGTTCCTATGGACAAGATTTTGAAACCTGTGCTACTAGAATGTGTGACTCCAGTTACTTGTTACTGGAGCCTGTCTTTCATTGTACACGGGGAAGCAGAATTGGTGTTAGTTTTCAAGGAATTACGCCCCCCTATGAAAATGTTGGTCCCCATCTGGAAGGCCTTGTGTGCTGCCACTGGTATTAAAGGAAGCTCAAACACAACCATGGAAGATGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00563 ko01100 map00563 map01100
Pfam Domains
Protein Families
PIG-H

Protein Analysis

184

Amino Acids

20.75

Weight (kDa)

9.37

Isoelectric Point (pI)

28.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011274)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G35530
fragaria_vesca FvH4_1g10271
malus_domestica MD02G1114800.v1.1 MD15G1230700.v1.1
prunus_persica Prupe.7G183400_v2.0.a1
pyrus_communis pycom02g08970 pycom15g20560
rosa_chinensis RchiOBHm_Chr2g0097101
rosa_laevigata RLG00000016703
rosa_multiflora Rmu_sc0024596.1_g000005
rosa_roxburghii Rroxscaffold_2G00144970
rosa_rugosa Rorug02G0063800 Rorug02G0063900 Rorug02G0064000 Rorug02G0064100
rosa_samantha Rh2AG111300 Rh2BG113200 Rh2CG115400 Rh2DG114600
rosa_wichuraiana Rw2G008660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 281
AccI GTMKAC 1 cut(s) 120
AciI CCGC 1 cut(s) 150
AdeI CACNNNGTG 1 cut(s) 307
AfaI GTAC 1 cut(s) 417
AfiI CCNNNNNNNGG 2 cut(s) 166, 281
AgsI TTSAA 4 cut(s) 24, 290, 355, 448
AjiI CACGTC 1 cut(s) 73
AluBI AGCT 2 cut(s) 146, 525
AluI AGCT 2 cut(s) 146, 525
Alw21I GWGCWC 1 cut(s) 78
Alw26I GTCTC 1 cut(s) 209
Alw44I GTGCAC 1 cut(s) 74
AoxI GGCC 2 cut(s) 53, 492
ApaLI GTGCAC 1 cut(s) 74
ApeKI GCWGC 1 cut(s) 503
AspS9I GGNCC 1 cut(s) 478
AvaII GGWCC 1 cut(s) 478
BaeGI GKGCMC 1 cut(s) 78
BarI GAAGNNNNNNTAC 2 cut(s) 219, 251
BauI CACGAG 1 cut(s) 57
Bbv12I GWGCWC 1 cut(s) 78
BbvI GCAGC 1 cut(s) 490
BccI CCATC 2 cut(s) 491, 539
BclI TGATCA 1 cut(s) 186
BcoDI GTCTC 1 cut(s) 209
BfaI CTAG 3 cut(s) 143, 293, 368
BisI GCNGC 1 cut(s) 504
BlsI GCNGC 1 cut(s) 505
Bme18I GGWCC 1 cut(s) 478
BmgBI CACGTC 1 cut(s) 73
BmgT120I GGNCC 1 cut(s) 478
BmiI GGNNCC 2 cut(s) 401, 480
BmsI GCATC 1 cut(s) 205
BpmI CTGGAG 2 cut(s) 366, 418
BsaJI CCNNGG 1 cut(s) 537
Bsc4I CCNNNNNNNGG 2 cut(s) 166, 281
Bse1I ACTGG 3 cut(s) 383, 401, 514
BseDI CCNNGG 1 cut(s) 537
BseLI CCNNNNNNNGG 2 cut(s) 166, 281
BseNI ACTGG 3 cut(s) 383, 401, 514
BseSI GKGCMC 1 cut(s) 78
BseXI GCAGC 1 cut(s) 490
BshFI GGCC 2 cut(s) 55, 494
BsiHKAI GWGCWC 1 cut(s) 78
BslFI GGGAC 1 cut(s) 464
BslI CCNNNNNNNGG 2 cut(s) 166, 281
BsmAI GTCTC 1 cut(s) 209
BsmFI GGGAC 1 cut(s) 464
BsmI GAATGC 1 cut(s) 218
BsnI GGCC 2 cut(s) 55, 494
Bsp1286I GDGCHC 1 cut(s) 78
Bsp1407I TGTACA 1 cut(s) 415
Bsp143I GATC 1 cut(s) 186
Bsp19I CCATGG 1 cut(s) 537
BspACI CCGC 1 cut(s) 150
BspANI GGCC 2 cut(s) 55, 494
BspLI GGNNCC 2 cut(s) 401, 480
BsrGI TGTACA 1 cut(s) 415
BsrI ACTGG 3 cut(s) 383, 401, 514
BssECI CCNNGG 1 cut(s) 537
BssMI GATC 1 cut(s) 186
BssNAI GTATAC 1 cut(s) 121
BssSI CACGAG 1 cut(s) 57
BssT1I CCWWGG 1 cut(s) 537
Bst1107I GTATAC 1 cut(s) 121
Bst2BI CACGAG 1 cut(s) 57
Bst6I CTCTTC 1 cut(s) 236
BstAUI TGTACA 1 cut(s) 415
BstC8I GCNNGC 1 cut(s) 276
BstDSI CCRYGG 1 cut(s) 537
BstKTI GATC 1 cut(s) 189
BstMAI GTCTC 1 cut(s) 209
BstMBI GATC 1 cut(s) 186
BstMWI GCNNNNNNNGC 1 cut(s) 500
BstSLI GKGCMC 1 cut(s) 78
BstV1I GCAGC 1 cut(s) 490
BstZ17I GTATAC 1 cut(s) 121
BsuRI GGCC 2 cut(s) 55, 494
BtgI CCRYGG 1 cut(s) 537
BtrI CACGTC 1 cut(s) 73
BtsIMutI CAGTG 2 cut(s) 189, 507
Cac8I GCNNGC 1 cut(s) 276
Cfr13I GGNCC 1 cut(s) 478
Csp6I GTAC 1 cut(s) 416
CviAII CATG 2 cut(s) 41, 538
CviJI RGCY 6 cut(s) 55, 146, 278, 402, 494, 525
CviKI_1 RGCY 6 cut(s) 55, 146, 278, 402, 494, 525
CviQI GTAC 1 cut(s) 416
DpnI GATC 1 cut(s) 188
DpnII GATC 1 cut(s) 186
DraIII CACNNNGTG 1 cut(s) 307
Eam1104I CTCTTC 1 cut(s) 236
EarI CTCTTC 1 cut(s) 236
Eco130I CCWWGG 1 cut(s) 537
Eco147I AGGCCT 1 cut(s) 494
Eco47I GGWCC 1 cut(s) 478
EcoT14I CCWWGG 1 cut(s) 537
EcoT22I ATGCAT 1 cut(s) 220
ErhI CCWWGG 1 cut(s) 537
FaeI CATG 2 cut(s) 44, 541
FaiI YATR 9 cut(s) 30, 42, 121, 199, 272, 306, 341, 467, 539
FalI AAGNNNNNCTT 2 cut(s) 98, 130
FaqI GGGAC 1 cut(s) 464
FatI CATG 2 cut(s) 40, 537
FbaI TGATCA 1 cut(s) 186
FblI GTMKAC 1 cut(s) 120
Fnu4HI GCNGC 1 cut(s) 504
Fsp4HI GCNGC 1 cut(s) 504
FspBI CTAG 3 cut(s) 143, 293, 368
GluI GCNGC 1 cut(s) 504
GsuI CTGGAG 2 cut(s) 366, 418
HaeIII GGCC 2 cut(s) 55, 494
Hin1II CATG 2 cut(s) 44, 541
HincII GTYRAC 1 cut(s) 70
HindII GTYRAC 1 cut(s) 70
HinfI GANTC 3 cut(s) 202, 257, 379
Hpy166II GTNNAC 4 cut(s) 70, 76, 121, 418
Hpy188I TCNGA 1 cut(s) 240
Hpy188III TCNNGA 3 cut(s) 24, 59, 487
Hpy8I GTNNAC 4 cut(s) 70, 76, 121, 418
Hpy99I CGWCG 1 cut(s) 330
HpyAV CCTTC 2 cut(s) 163, 484
HpyCH4IV ACGT 1 cut(s) 72
HpyCH4V TGCA 3 cut(s) 76, 104, 218
HpyF10VI GCNNNNNNNGC 1 cut(s) 500
HpySE526I ACGT 1 cut(s) 72
Hsp92II CATG 2 cut(s) 44, 541
Ksp22I TGATCA 1 cut(s) 186
Kzo9I GATC 1 cut(s) 186
LmnI GCTCC 1 cut(s) 399
LpnPI CCDG 7 cut(s) 288, 372, 382, 396, 416, 472, 495
Lsp1109I GCAGC 1 cut(s) 490
LweI GCATC 1 cut(s) 205
MaeI CTAG 3 cut(s) 143, 293, 368
MaeII ACGT 1 cut(s) 72
MaeIII GTNAC 3 cut(s) 376, 385, 392
MalI GATC 1 cut(s) 188
MboI GATC 1 cut(s) 186
MboII GAAGA 2 cut(s) 118, 253
MhlI GDGCHC 1 cut(s) 78
MluCI AATT 3 cut(s) 19, 431, 452
MlyI GAGTC 3 cut(s) 211, 266, 373
MnlI CCTC 1 cut(s) 66
Mph1103I ATGCAT 1 cut(s) 220
MseI TTAA 2 cut(s) 171, 516
MslI CAYNNNNRTG 1 cut(s) 536
Mva1269I GAATGC 1 cut(s) 218
MwoI GCNNNNNNNGC 1 cut(s) 500
NcoI CCATGG 1 cut(s) 537
NdeII GATC 1 cut(s) 186
NlaIII CATG 2 cut(s) 44, 541
NlaIV GGNNCC 2 cut(s) 401, 480
NmuCI GTSAC 1 cut(s) 376
NsiI ATGCAT 1 cut(s) 220
PceI AGGCCT 1 cut(s) 494
PctI GAATGC 1 cut(s) 218
PflMI CCANNNNNTGG 1 cut(s) 281
PkrI GCNGC 1 cut(s) 505
PleI GAGTC 3 cut(s) 210, 265, 373
PpsI GAGTC 3 cut(s) 210, 265, 373
PspN4I GGNNCC 2 cut(s) 401, 480
PspPI GGNCC 1 cut(s) 478
RsaI GTAC 1 cut(s) 417
RsaNI GTAC 1 cut(s) 416
RseI CAYNNNNRTG 1 cut(s) 536
SaqAI TTAA 2 cut(s) 171, 516
SatI GCNGC 1 cut(s) 504
Sau3AI GATC 1 cut(s) 186
Sau96I GGNCC 1 cut(s) 478
SchI GAGTC 3 cut(s) 211, 266, 373
SduI GDGCHC 1 cut(s) 78
SetI ASST 5 cut(s) 75, 148, 162, 361, 527
SfaNI GCATC 1 cut(s) 205
SinI GGWCC 1 cut(s) 478
SmiMI CAYNNNNRTG 1 cut(s) 536
Sse9I AATT 3 cut(s) 19, 431, 452
SseBI AGGCCT 1 cut(s) 494
SsiI CCGC 1 cut(s) 150
SspI AATATT 1 cut(s) 35
SspMI CTAG 3 cut(s) 143, 293, 368
StuI AGGCCT 1 cut(s) 494
StyI CCWWGG 1 cut(s) 537
TaiI ACGT 1 cut(s) 75
TasI AATT 3 cut(s) 19, 431, 452
TatI WGTACW 1 cut(s) 415
Tru1I TTAA 2 cut(s) 171, 516
Tru9I TTAA 2 cut(s) 171, 516
TscAI CASTG 2 cut(s) 189, 514
TseFI GTSAC 1 cut(s) 376
TseI GCWGC 1 cut(s) 503
Tsp45I GTSAC 1 cut(s) 376
TspDTI ATGAA 2 cut(s) 400, 482
TspGWI ACGGA 1 cut(s) 250
TspRI CASTG 2 cut(s) 189, 514
Van91I CCANNNNNTGG 1 cut(s) 281
VneI GTGCAC 1 cut(s) 74
VpaK11BI GGWCC 1 cut(s) 478
XmiI GTMKAC 1 cut(s) 120
XspI CTAG 3 cut(s) 143, 293, 368
Zsp2I ATGCAT 1 cut(s) 220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.