Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007340

Physical Location & Seq

Genomic Coordinates Forward (+)

18658995 .. 18663310

Gene Structure 4316 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G198700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

ATGTCAACAGAGAGAGAGAGGCACGCTTCGTTGCCCTCAACGTCTCCCGAGGACAACGCACTGTTTCTGGATATAATGCATGAGGCTCCATTGTTCGGTCACCGGAAGTCGAGAAGCCTTTTCGGAAGTGTTTTTTACTTGATTATACTCGTAGGCTATGCTTCTCTGGCTGTCGCAGCTCCATGGATTTTTCATCCCATACGCGATTTAATCCCCCAATTGCTTTGTAGTTGCAACGTCCTTCTTCTGATAGTCACAGGCATCTTTCAGCAGTATCTGGTATACCAAGTTCAGAAAATACGCTTACAGGGGTATTATAGTTTCAGCCAGAAGTTGAAGCATATTGTTCGCCTACCTTTTGCAGCTACTTCATATGGAACTGCTGCAATGTTACTTGTCATGGTCTGGAGACCCCACATCAGTTTCCTTACTCTGCCCGCAATTTTGAGGACTGTTATGGTAATTGAAGCAATATGTGCCGGATCTTTTATGAGTATCTATATTGGTTATGTTCACCAGTACAACTCATTAAATTCCCAGCCTGATGTCTTAAAGTCATTATATTCTCCCCTTCAACCCTCAAGTTCTTTGGAAGGTTTGAGGTATCATGATGCTGGTCGACTTTCTGATCAGCAGATGGCTTTGTTGCAATATCAGCGTGAAAACCTTCATTTTTTGAGTGAAGAGATCCTTCGATTGCAAGAGTGCTTAAGTAACTATGAACGAACTAATGATGGAAGCACACCTCAGGTTGACCTTGCCCATCTATTGGCAGCTCGTGATCAGGAACTACGGACGGTTTCTGCTGAGATGAATCAATTGCAGTCTGAGTTAAGGCTTGCTCGGTCGTTGATAGCTGAGAGGGATTCTGAAATCCAGAAAGTTCGGACAACCAACAATCAGTACGTAGAGGAGAATGAAAGATTGAGAGCCATTTTAGGAGAATGGAGTACCCGAGCAGCAAAGCTTGAACGAGCATTGGAGGCTGAGCGGATGTCCAATCTTGAATTACAAAAGAAGATTCCAACGCTCAGAAGTCAATCACAATCCTCATCTGAACCAACCAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TMEM192

Protein Analysis

357

Amino Acids

40.62

Weight (kDa)

7.74

Isoelectric Point (pI)

58.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007340)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G06005 AT2G06005 AT2G06005 AT2G06005 AT2G06005 AT2G06005 AT5G20580 AT5G20580
fragaria_vesca	FvH4_1g08690
malus_domestica	MD02G1091400.v1.1 MD15G1217700.v1.1
prunus_persica	Prupe.7G198700_v2.0.a1 Prupe.7G198700_v2.0.a1
pyrus_communis	pycom02g07290
rosa_chinensis	RchiOBHm_Chr2g0095141
rosa_laevigata	RLG00000016541
rosa_multiflora	Rmu_sc0004439.1_g000009
rosa_roxburghii	Rroxscaffold_2G00146630 Rroxscaffold_2G00146650
rosa_samantha	Rh2AG096400 Rh2BG097800 Rh2CG099800 Rh2DG097200 Rh2DG097300
rosa_wichuraiana	Rw2G007260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	769
AccBSI	CCGCTC	1 cut(s)	991
AccI	GTMKAC	2 cut(s)	282, 619
AccII	CGCG	1 cut(s)	204
AciI	CCGC	2 cut(s)	438, 991
AclWI	GGATC	2 cut(s)	490, 682
AcsI	RAATTY	1 cut(s)	532
AfaI	GTAC	3 cut(s)	521, 905, 952
AfiI	CCNNNNNNNGG	2 cut(s)	95, 769
AflII	CTTAAG	1 cut(s)	709
AgsI	TTSAA	5 cut(s)	337, 467, 575, 971, 1007
AluBI	AGCT	5 cut(s)	179, 365, 776, 857, 967
AluI	AGCT	5 cut(s)	179, 365, 776, 857, 967
Alw26I	GTCTC	2 cut(s)	48, 403
AlwI	GGATC	2 cut(s)	490, 682
AlwNI	CAGNNNCTG	1 cut(s)	277
Ama87I	CYCGRG	2 cut(s)	47, 954
ApeKI	GCWGC	5 cut(s)	176, 362, 383, 773, 959
ApoI	RAATTY	1 cut(s)	532
Asp700I	GAANNNNTTC	1 cut(s)	666
AsuHPI	GGTGA	2 cut(s)	92, 506
AvaI	CYCGRG	2 cut(s)	47, 954
AxyI	CCTNAGG	1 cut(s)	747
BauI	CACGAG	1 cut(s)	777
BbvI	GCAGC	5 cut(s)	188, 370, 374, 785, 971
BccI	CCATC	3 cut(s)	631, 728, 771
BcgI	CGANNNNNNTGC	2 cut(s)	329, 363
BclI	TGATCA	2 cut(s)	628, 781
BcoDI	GTCTC	2 cut(s)	48, 403
BfrI	CTTAAG	1 cut(s)	709
BisI	GCNGC	5 cut(s)	177, 363, 384, 774, 960
BlpI	GCTNAGC	1 cut(s)	987
BlsI	GCNGC	5 cut(s)	178, 364, 385, 775, 961
BmeT110I	CYCGRG	2 cut(s)	47, 954
BmiI	GGNNCC	1 cut(s)	87
BmsI	GCATC	2 cut(s)	270, 601
BpmI	CTGGAG	1 cut(s)	427
Bpu1102I	GCTNAGC	1 cut(s)	987
BpuEI	CTTGAG	1 cut(s)	565
BsaAI	YACGTR	1 cut(s)	907
BsaI	GGTCTC	1 cut(s)	403
BsaJI	CCNNGG	2 cut(s)	48, 182
BsaWI	WCCGGW	1 cut(s)	102
Bsc4I	CCNNNNNNNGG	2 cut(s)	95, 769
Bse1I	ACTGG	1 cut(s)	517
Bse21I	CCTNAGG	1 cut(s)	747
Bse3DI	GCAATG	1 cut(s)	393
BseDI	CCNNGG	2 cut(s)	48, 182
BseGI	GGATG	2 cut(s)	193, 999
BseLI	CCNNNNNNNGG	2 cut(s)	95, 769
BseMI	GCAATG	1 cut(s)	393
BseMII	CTCAG	6 cut(s)	761, 798, 819, 849, 978, 1045
BseNI	ACTGG	1 cut(s)	517
BseRI	GAGGAG	1 cut(s)	926
BseXI	GCAGC	5 cut(s)	188, 370, 374, 785, 971
BseYI	CCCAGC	1 cut(s)	537
Bsh1236I	CGCG	1 cut(s)	204
Bsh1285I	CGRYCG	1 cut(s)	848
BsiEI	CGRYCG	1 cut(s)	848
BsiHKCI	CYCGRG	2 cut(s)	47, 954
BsiSI	CCGG	2 cut(s)	103, 480
BslI	CCNNNNNNNGG	2 cut(s)	95, 769
BsmAI	GTCTC	2 cut(s)	48, 403
BsmBI	CGTCTC	1 cut(s)	48
Bso31I	GGTCTC	1 cut(s)	403
BsoBI	CYCGRG	2 cut(s)	47, 954
Bsp143I	GATC	4 cut(s)	482, 628, 687, 781
Bsp1720I	GCTNAGC	1 cut(s)	987
Bsp19I	CCATGG	1 cut(s)	182
BspACI	CCGC	2 cut(s)	438, 991
BspCNI	CTCAG	6 cut(s)	760, 799, 820, 850, 979, 1044
BspFNI	CGCG	1 cut(s)	204
BspHI	TCATGA	1 cut(s)	607
BspLI	GGNNCC	1 cut(s)	87
BspPI	GGATC	2 cut(s)	490, 682
BspTI	CTTAAG	1 cut(s)	709
BspTNI	GGTCTC	1 cut(s)	403
BsrBI	CCGCTC	1 cut(s)	991
BsrDI	GCAATG	1 cut(s)	393
BsrI	ACTGG	1 cut(s)	517
BssECI	CCNNGG	2 cut(s)	48, 182
BssMI	GATC	4 cut(s)	482, 628, 687, 781
BssNAI	GTATAC	1 cut(s)	283
BssSI	CACGAG	1 cut(s)	777
BssT1I	CCWWGG	1 cut(s)	182
Bst1107I	GTATAC	1 cut(s)	283
Bst2BI	CACGAG	1 cut(s)	777
Bst4CI	ACNGT	3 cut(s)	63, 454, 799
Bst6I	CTCTTC	1 cut(s)	678
BstAFI	CTTAAG	1 cut(s)	709
BstAPI	GCANNNNNTGC	1 cut(s)	476
BstBAI	YACGTR	1 cut(s)	907
BstC8I	GCNNGC	3 cut(s)	24, 438, 840
BstDEI	CTNAG	6 cut(s)	747, 807, 828, 858, 987, 1031
BstDSI	CCRYGG	1 cut(s)	182
BstEII	GGTNACC	1 cut(s)	98
BstF5I	GGATG	2 cut(s)	193, 999
BstFNI	CGCG	1 cut(s)	204
BstKTI	GATC	4 cut(s)	485, 631, 690, 784
BstMAI	GTCTC	2 cut(s)	48, 403
BstMBI	GATC	4 cut(s)	482, 628, 687, 781
BstMCI	CGRYCG	1 cut(s)	848
BstMWI	GCNNNNNNNGC	5 cut(s)	167, 176, 476, 655, 983
BstPI	GGTNACC	1 cut(s)	98
BstSNI	TACGTA	1 cut(s)	907
BstUI	CGCG	1 cut(s)	204
BstV1I	GCAGC	5 cut(s)	188, 370, 374, 785, 971
BstX2I	RGATCY	2 cut(s)	482, 687
BstYI	RGATCY	2 cut(s)	482, 687
BstZ17I	GTATAC	1 cut(s)	283
Bsu36I	CCTNAGG	1 cut(s)	747
BtgI	CCRYGG	1 cut(s)	182
BtsCI	GGATG	2 cut(s)	193, 999
BtsIMutI	CAGTG	1 cut(s)	59
Cac8I	GCNNGC	3 cut(s)	24, 438, 840
CaiI	CAGNNNCTG	1 cut(s)	277
CciI	TCATGA	1 cut(s)	607
Csp6I	GTAC	3 cut(s)	520, 904, 951
CviAII	CATG	4 cut(s)	80, 183, 400, 608
CviQI	GTAC	3 cut(s)	520, 904, 951
DdeI	CTNAG	6 cut(s)	747, 807, 828, 858, 987, 1031
DpnI	GATC	4 cut(s)	484, 630, 689, 783
DpnII	GATC	4 cut(s)	482, 628, 687, 781
Eam1104I	CTCTTC	1 cut(s)	678
EarI	CTCTTC	1 cut(s)	678
Eco105I	TACGTA	1 cut(s)	907
Eco130I	CCWWGG	1 cut(s)	182
Eco31I	GGTCTC	1 cut(s)	403
Eco81I	CCTNAGG	1 cut(s)	747
Eco88I	CYCGRG	2 cut(s)	47, 954
Eco91I	GGTNACC	1 cut(s)	98
EcoO65I	GGTNACC	1 cut(s)	98
EcoT14I	CCWWGG	1 cut(s)	182
EcoT22I	ATGCAT	1 cut(s)	81
ErhI	CCWWGG	1 cut(s)	182
Esp3I	CGTCTC	1 cut(s)	48
FaeI	CATG	4 cut(s)	83, 186, 403, 611
FalI	AAGNNNNNCTT	2 cut(s)	675, 707
FatI	CATG	4 cut(s)	79, 182, 399, 607
FauI	CCCGC	1 cut(s)	445
FauNDI	CATATG	1 cut(s)	373
FbaI	TGATCA	2 cut(s)	628, 781
FblI	GTMKAC	2 cut(s)	282, 619
Fnu4HI	GCNGC	5 cut(s)	177, 363, 384, 774, 960
FokI	GGATG	2 cut(s)	180, 1006
Fsp4HI	GCNGC	5 cut(s)	177, 363, 384, 774, 960
GluI	GCNGC	5 cut(s)	177, 363, 384, 774, 960
GsaI	CCCAGC	1 cut(s)	541
GsuI	CTGGAG	1 cut(s)	427
HapII	CCGG	2 cut(s)	103, 480
Hin1II	CATG	4 cut(s)	83, 186, 403, 611
HincII	GTYRAC	3 cut(s)	6, 620, 754
HindII	GTYRAC	3 cut(s)	6, 620, 754
HindIII	AAGCTT	1 cut(s)	965
HinfI	GANTC	3 cut(s)	814, 866, 1021
HpaII	CCGG	2 cut(s)	103, 480
HphI	GGTGA	2 cut(s)	92, 506
Hpy166II	GTNNAC	5 cut(s)	6, 283, 514, 620, 754
Hpy188I	TCNGA	9 cut(s)	125, 249, 294, 628, 829, 871, 888, 1034, 1057
Hpy188III	TCNNGA	9 cut(s)	47, 68, 111, 406, 608, 779, 785, 877, 1004
Hpy8I	GTNNAC	5 cut(s)	6, 283, 514, 620, 754
HpyAV	CCTTC	5 cut(s)	251, 581, 587, 677, 701
HpyCH4III	ACNGT	3 cut(s)	63, 454, 799
HpyCH4IV	ACGT	3 cut(s)	41, 237, 906
HpyCH4V	TGCA	7 cut(s)	79, 234, 362, 386, 649, 700, 823
HpyF10VI	GCNNNNNNNGC	5 cut(s)	167, 176, 476, 655, 983
HpyF3I	CTNAG	6 cut(s)	747, 807, 828, 858, 987, 1031
HpySE526I	ACGT	3 cut(s)	41, 237, 906
Hsp92II	CATG	4 cut(s)	83, 186, 403, 611
Ksp22I	TGATCA	2 cut(s)	628, 781
Kzo9I	GATC	4 cut(s)	482, 628, 687, 781
LmnI	GCTCC	2 cut(s)	91, 184
Lsp1109I	GCAGC	5 cut(s)	188, 370, 374, 785, 971
LweI	GCATC	2 cut(s)	270, 601
MaeII	ACGT	3 cut(s)	41, 237, 906
MaeIII	GTNAC	4 cut(s)	98, 253, 390, 713
MalI	GATC	4 cut(s)	484, 630, 689, 783
MbiI	CCGCTC	1 cut(s)	991
MboI	GATC	4 cut(s)	482, 628, 687, 781
MboII	GAAGA	3 cut(s)	236, 695, 1030
MfeI	CAATTG	2 cut(s)	218, 818
MflI	RGATCY	2 cut(s)	482, 687
MluCI	AATT	6 cut(s)	218, 441, 462, 532, 818, 1007
MmeI	TCCRAC	1 cut(s)	1049
Mph1103I	ATGCAT	1 cut(s)	81
MroXI	GAANNNNTTC	1 cut(s)	666
MseI	TTAA	5 cut(s)	209, 530, 551, 710, 833
MspCI	CTTAAG	1 cut(s)	709
MspI	CCGG	2 cut(s)	103, 480
MunI	CAATTG	2 cut(s)	218, 818
MvnI	CGCG	1 cut(s)	204
MwoI	GCNNNNNNNGC	5 cut(s)	167, 176, 476, 655, 983
NcoI	CCATGG	1 cut(s)	182
NdeI	CATATG	1 cut(s)	373
NdeII	GATC	4 cut(s)	482, 628, 687, 781
NlaIII	CATG	4 cut(s)	83, 186, 403, 611
NlaIV	GGNNCC	1 cut(s)	87
NmuCI	GTSAC	2 cut(s)	98, 253
NsiI	ATGCAT	1 cut(s)	81
PagI	TCATGA	1 cut(s)	607
PdmI	GAANNNNTTC	1 cut(s)	666
PfeI	GAWTC	3 cut(s)	814, 866, 1021
PflMI	CCANNNNNTGG	1 cut(s)	769
PkrI	GCNGC	5 cut(s)	178, 364, 385, 775, 961
Ppu21I	YACGTR	1 cut(s)	907
PspEI	GGTNACC	1 cut(s)	98
PspFI	CCCAGC	1 cut(s)	537
PspN4I	GGNNCC	1 cut(s)	87
PsrI	GAACNNNNNNTAC	2 cut(s)	273, 305
PstNI	CAGNNNCTG	1 cut(s)	277
PsuI	RGATCY	2 cut(s)	482, 687
RsaI	GTAC	3 cut(s)	521, 905, 952
RsaNI	GTAC	3 cut(s)	520, 904, 951
SalI	GTCGAC	1 cut(s)	618
SaqAI	TTAA	5 cut(s)	209, 530, 551, 710, 833
SatI	GCNGC	5 cut(s)	177, 363, 384, 774, 960
Sau3AI	GATC	4 cut(s)	482, 628, 687, 781
SfaNI	GCATC	2 cut(s)	270, 601
SmlI	CTYRAG	2 cut(s)	580, 709
SmoI	CTYRAG	2 cut(s)	580, 709
SnaBI	TACGTA	1 cut(s)	907
Sse9I	AATT	6 cut(s)	218, 441, 462, 532, 818, 1007
SsiI	CCGC	2 cut(s)	438, 991
StyI	CCWWGG	1 cut(s)	182
TaaI	ACNGT	3 cut(s)	63, 454, 799
TaiI	ACGT	3 cut(s)	44, 240, 909
TaqI	TCGA	3 cut(s)	110, 619, 694
TaqII	GACCGA	2 cut(s)	86, 834
TasI	AATT	6 cut(s)	218, 441, 462, 532, 818, 1007
TatI	WGTACW	1 cut(s)	519
TfiI	GAWTC	3 cut(s)	814, 866, 1021
Tru1I	TTAA	5 cut(s)	209, 530, 551, 710, 833
Tru9I	TTAA	5 cut(s)	209, 530, 551, 710, 833
TscAI	CASTG	1 cut(s)	66
TseFI	GTSAC	2 cut(s)	98, 253
TseI	GCWGC	5 cut(s)	176, 362, 383, 773, 959
Tsp45I	GTSAC	2 cut(s)	98, 253
TspDTI	ATGAA	6 cut(s)	182, 360, 659, 735, 827, 933
TspGWI	ACGGA	1 cut(s)	808
TspRI	CASTG	1 cut(s)	66
Van91I	CCANNNNNTGG	1 cut(s)	769
Vha464I	CTTAAG	1 cut(s)	709
XapI	RAATTY	1 cut(s)	532
XmiI	GTMKAC	2 cut(s)	282, 619
XmnI	GAANNNNTTC	1 cut(s)	666
Zsp2I	ATGCAT	1 cut(s)	81

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.