Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010511

Physical Location & Seq

Genomic Coordinates Reverse (-)

19384361 .. 19387265

Gene Structure 2905 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G213000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 774 bp

ATGGCGGGAATAGTGGTGGTTTTTGACTTTGACCGAACCCTAATCGACGGTGACAGTGATAGCTGGGTCGTTGCGGAGATGGGTCTCACTCAGCTCTTCAATGAGCTTCGCTCTACTTTGCCATGGAACAAACTCATGGATAGAATGATGGAGGAGCTGCATTTGCAAGGAAAAAGTTCTGTGGATATTAAAGAGTGCCTCAAAAGAATTCCAATGCATCTAGGGGTAATTGCAGCTATTAAGTCAGCTCATGCTTCAGGATGTGATTTGAGGATTATTAGCGATGCAAATCAGTTTTTTATTGAGACAATCTTAGAATGTCATGGTTTGTTAGGATCCTTCTCACAGATTGTCACAAATCCAAGCATTGTTGATGGAGATGGAAGACTCAGGATTTTTCCGTACCATGATGTAGGCTCACCTTCTCATGGTTGCAATTTATGCCCTTCAAATTTGTGCAAGGGTGTGGTGATTGATCAAATCCGAGCATCTGTTTCTGCCAATGGGAGGAAAATATATATCTACCTAGGAGATGGGAGAAATGATTTTTGCCCAACTTTAAGGCTTGTAGAAGGAGACCATGTAATGCCAAGGAAGGACTATGCTCTATCAAAGCGCATTTACAGCAACCGAATGCTTATCAAGGCTGACATCCATGAATGGAGTGATGGAGAGGAGCTTGGGAAGATATTGCTTCACCTCATCCACAGAATTTCTACTGAAGAAATTAATTGTAGTGACCTCAGTCAGCTGAACTCATCTGACCACATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0004427 GO:0006725 GO:0006732 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009229 GO:0009987 GO:0016043 GO:0016311 GO:0016462 GO:0016787 GO:0016788 GO:0016791 GO:0016817 GO:0016818 GO:0018130 GO:0019438 GO:0019637 GO:0022607 GO:0034641 GO:0042131 GO:0042357 GO:0042578 GO:0043933 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0046483 GO:0051186 GO:0051188 GO:0051259 GO:0051262 GO:0065003 GO:0071704 GO:0071840 GO:0072527 GO:0072528 GO:0090407 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00564 ko00750 ko01100 map00564 map00750 map01100

Pfam Domains

Protein Families

Put_Phosphatase

Protein Analysis

258

Amino Acids

28.75

Weight (kDa)

5.74

Isoelectric Point (pI)

42.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29530 AT4G29530
fragaria_vesca	FvH4_1g07100 FvH4_1g07100
malus_domestica	MD15G1204200.v1.1
prunus_persica	Prupe.7G213000_v2.0.a1
pyrus_communis	pycom15g18100
rosa_chinensis	RchiOBHm_Chr2g0092991 RchiOBHm_Chr5g0041441
rosa_laevigata	RLG00000016356
rosa_multiflora	Rmu_co8483593.1_g000001 Rmu_sc0000965.1_g000020
rosa_roxburghii	Rroxscaffold_1G00039130 Rroxscaffold_2G00148640
rosa_rugosa	Rorug02G0031100 Rorug02G0031200
rosa_samantha	Rh2AG077000 Rh2BG078400 Rh2CG080600 Rh2DG075700
rosa_wichuraiana	Rw2G006920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	5, 74
AclWI	GGATC	2 cut(s)	330, 343
AcsI	RAATTY	3 cut(s)	207, 451, 711
AcuI	CTGAAG	2 cut(s)	240, 741
AfaI	GTAC	1 cut(s)	404
AfiI	CCNNNNNNNGG	2 cut(s)	428, 507
AgsI	TTSAA	2 cut(s)	100, 450
AluBI	AGCT	8 cut(s)	63, 94, 106, 157, 236, 248, 679, 751
AluI	AGCT	8 cut(s)	63, 94, 106, 157, 236, 248, 679, 751
Alw26I	GTCTC	3 cut(s)	89, 299, 570
AlwI	GGATC	2 cut(s)	330, 343
ApeKI	GCWGC	2 cut(s)	157, 233
ApoI	RAATTY	3 cut(s)	207, 451, 711
AseI	ATTAAT	1 cut(s)	729
Asp700I	GAANNNNTTC	1 cut(s)	175
AspA2I	CCTAGG	1 cut(s)	526
AspLEI	GCGC	1 cut(s)	618
AsuHPI	GGTGA	4 cut(s)	62, 411, 481, 689
AvrII	CCTAGG	1 cut(s)	526
BamHI	GGATCC	1 cut(s)	335
BbsI	GAAGAC	1 cut(s)	391
BbvI	GCAGC	2 cut(s)	144, 245
BccI	CCATC	6 cut(s)	73, 142, 368, 374, 527, 662
BclI	TGATCA	1 cut(s)	475
BcoDI	GTCTC	3 cut(s)	89, 299, 570
BfaI	CTAG	2 cut(s)	221, 527
BisI	GCNGC	2 cut(s)	158, 234
BlnI	CCTAGG	1 cut(s)	526
BlsI	GCNGC	2 cut(s)	159, 235
BmiI	GGNNCC	1 cut(s)	337
BmsI	GCATC	3 cut(s)	226, 274, 497
BoxI	GACNNNNGTC	1 cut(s)	744
BpiI	GAAGAC	1 cut(s)	391
BplI	GAGNNNNNCTC	2 cut(s)	95, 127
BsaBI	GATNNNNATC	1 cut(s)	288
BsaI	GGTCTC	2 cut(s)	89, 570
BsaJI	CCNNGG	3 cut(s)	122, 526, 590
BsaXI	ACNNNNNCTCC	2 cut(s)	567, 597
Bsc4I	CCNNNNNNNGG	2 cut(s)	428, 507
Bse8I	GATNNNNATC	1 cut(s)	288
BseDI	CCNNGG	3 cut(s)	122, 526, 590
BseGI	GGATG	3 cut(s)	266, 651, 702
BseJI	GATNNNNATC	1 cut(s)	288
BseLI	CCNNNNNNNGG	2 cut(s)	428, 507
BseMII	CTCAG	3 cut(s)	104, 403, 757
BseRI	GAGGAG	2 cut(s)	167, 689
BseXI	GCAGC	2 cut(s)	144, 245
BseYI	CCCAGC	1 cut(s)	63
BslI	CCNNNNNNNGG	2 cut(s)	428, 507
BsmAI	GTCTC	3 cut(s)	89, 299, 570
BsmI	GAATGC	1 cut(s)	639
Bso31I	GGTCTC	2 cut(s)	89, 570
Bsp143I	GATC	2 cut(s)	335, 475
Bsp19I	CCATGG	1 cut(s)	122
BspACI	CCGC	2 cut(s)	5, 74
BspCNI	CTCAG	3 cut(s)	103, 402, 756
BspLI	GGNNCC	1 cut(s)	337
BspPI	GGATC	2 cut(s)	330, 343
BspQI	GCTCTTC	1 cut(s)	101
BspTNI	GGTCTC	2 cut(s)	89, 570
BssECI	CCNNGG	3 cut(s)	122, 526, 590
BssMI	GATC	2 cut(s)	335, 475
BssT1I	CCWWGG	3 cut(s)	122, 526, 590
Bst4CI	ACNGT	2 cut(s)	50, 56
Bst6I	CTCTTC	1 cut(s)	101
BstAPI	GCANNNNNTGC	1 cut(s)	441
BstDEI	CTNAG	4 cut(s)	90, 313, 389, 743
BstDSI	CCRYGG	1 cut(s)	122
BstF5I	GGATG	3 cut(s)	266, 651, 702
BstHHI	GCGC	1 cut(s)	618
BstKTI	GATC	2 cut(s)	338, 478
BstMAI	GTCTC	3 cut(s)	89, 299, 570
BstMBI	GATC	2 cut(s)	335, 475
BstMWI	GCNNNNNNNGC	3 cut(s)	163, 441, 624
BstPAI	GACNNNNGTC	1 cut(s)	744
BstV1I	GCAGC	2 cut(s)	144, 245
BstV2I	GAAGAC	1 cut(s)	391
BstX2I	RGATCY	1 cut(s)	335
BstYI	RGATCY	1 cut(s)	335
BtgI	CCRYGG	1 cut(s)	122
BtgZI	GCGATG	1 cut(s)	297
BtsCI	GGATG	3 cut(s)	266, 651, 702
BtsIMutI	CAGTG	1 cut(s)	61
CfoI	GCGC	1 cut(s)	618
Csp6I	GTAC	1 cut(s)	403
CviAII	CATG	8 cut(s)	123, 136, 251, 323, 407, 428, 581, 656
CviQI	GTAC	1 cut(s)	403
DdeI	CTNAG	4 cut(s)	90, 313, 389, 743
DpnI	GATC	2 cut(s)	337, 477
DpnII	GATC	2 cut(s)	335, 475
Eam1104I	CTCTTC	1 cut(s)	101
EarI	CTCTTC	1 cut(s)	101
Eco130I	CCWWGG	3 cut(s)	122, 526, 590
Eco31I	GGTCTC	2 cut(s)	89, 570
Eco57I	CTGAAG	2 cut(s)	240, 741
EcoRI	GAATTC	1 cut(s)	207
EcoT14I	CCWWGG	3 cut(s)	122, 526, 590
EcoT22I	ATGCAT	1 cut(s)	219
ErhI	CCWWGG	3 cut(s)	122, 526, 590
FaeI	CATG	8 cut(s)	126, 139, 254, 326, 410, 431, 584, 659
FatI	CATG	8 cut(s)	122, 135, 250, 322, 406, 427, 580, 655
FauNDI	CATATG	1 cut(s)	770
FbaI	TGATCA	1 cut(s)	475
Fnu4HI	GCNGC	2 cut(s)	158, 234
FokI	GGATG	3 cut(s)	273, 638, 689
Fsp4HI	GCNGC	2 cut(s)	158, 234
FspBI	CTAG	2 cut(s)	221, 527
GlaI	GCGC	1 cut(s)	617
GluI	GCNGC	2 cut(s)	158, 234
GsaI	CCCAGC	1 cut(s)	67
HhaI	GCGC	1 cut(s)	618
Hin1II	CATG	8 cut(s)	126, 139, 254, 326, 410, 431, 584, 659
Hin6I	GCGC	1 cut(s)	616
HinP1I	GCGC	1 cut(s)	616
HinfI	GANTC	1 cut(s)	387
HphI	GGTGA	4 cut(s)	62, 411, 481, 689
Hpy188I	TCNGA	2 cut(s)	485, 763
Hpy188III	TCNNGA	2 cut(s)	258, 391
Hpy99I	CGWCG	1 cut(s)	50
HpyAV	CCTTC	5 cut(s)	349, 432, 456, 566, 589
HpyCH4III	ACNGT	2 cut(s)	50, 56
HpyCH4V	TGCA	7 cut(s)	160, 166, 217, 233, 287, 435, 459
HpyF10VI	GCNNNNNNNGC	3 cut(s)	163, 441, 624
HpyF3I	CTNAG	4 cut(s)	90, 313, 389, 743
Hsp92II	CATG	8 cut(s)	126, 139, 254, 326, 410, 431, 584, 659
HspAI	GCGC	1 cut(s)	616
Ksp22I	TGATCA	1 cut(s)	475
Kzo9I	GATC	2 cut(s)	335, 475
LguI	GCTCTTC	1 cut(s)	101
LmnI	GCTCC	2 cut(s)	154, 676
LpnPI	CCDG	3 cut(s)	49, 243, 376
Lsp1109I	GCAGC	2 cut(s)	144, 245
LweI	GCATC	3 cut(s)	226, 274, 497
MaeI	CTAG	2 cut(s)	221, 527
MaeIII	GTNAC	3 cut(s)	50, 352, 737
MalI	GATC	2 cut(s)	337, 477
MboI	GATC	2 cut(s)	335, 475
MboII	GAAGA	4 cut(s)	88, 396, 697, 734
MflI	RGATCY	1 cut(s)	335
MluCI	AATT	7 cut(s)	207, 228, 436, 451, 711, 726, 730
MlyI	GAGTC	1 cut(s)	381
MnlI	CCTC	7 cut(s)	145, 209, 264, 501, 667, 710, 752
Mph1103I	ATGCAT	1 cut(s)	219
MroXI	GAANNNNTTC	1 cut(s)	175
MseI	TTAA	4 cut(s)	189, 240, 560, 729
MspA1I	CMGCKG	1 cut(s)	751
Mva1269I	GAATGC	1 cut(s)	639
MwoI	GCNNNNNNNGC	3 cut(s)	163, 441, 624
NcoI	CCATGG	1 cut(s)	122
NdeI	CATATG	1 cut(s)	770
NdeII	GATC	2 cut(s)	335, 475
NlaIII	CATG	8 cut(s)	126, 139, 254, 326, 410, 431, 584, 659
NlaIV	GGNNCC	1 cut(s)	337
NmuCI	GTSAC	3 cut(s)	50, 352, 737
NsiI	ATGCAT	1 cut(s)	219
PciSI	GCTCTTC	1 cut(s)	101
PctI	GAATGC	1 cut(s)	639
PdmI	GAANNNNTTC	1 cut(s)	175
PkrI	GCNGC	2 cut(s)	159, 235
PleI	GAGTC	1 cut(s)	381
PpsI	GAGTC	1 cut(s)	381
PshAI	GACNNNNGTC	1 cut(s)	744
PshBI	ATTAAT	1 cut(s)	729
PspFI	CCCAGC	1 cut(s)	63
PspN4I	GGNNCC	1 cut(s)	337
PsuI	RGATCY	1 cut(s)	335
PvuII	CAGCTG	1 cut(s)	751
RsaI	GTAC	1 cut(s)	404
RsaNI	GTAC	1 cut(s)	403
SapI	GCTCTTC	1 cut(s)	101
SaqAI	TTAA	4 cut(s)	189, 240, 560, 729
SatI	GCNGC	2 cut(s)	158, 234
Sau3AI	GATC	2 cut(s)	335, 475
SchI	GAGTC	1 cut(s)	381
SfaNI	GCATC	3 cut(s)	226, 274, 497
Sse9I	AATT	7 cut(s)	207, 228, 436, 451, 711, 726, 730
SsiI	CCGC	2 cut(s)	5, 74
SspMI	CTAG	2 cut(s)	221, 527
StyI	CCWWGG	3 cut(s)	122, 526, 590
TaaI	ACNGT	2 cut(s)	50, 56
TaqI	TCGA	1 cut(s)	45
TaqII	GACCGA	1 cut(s)	48
TasI	AATT	7 cut(s)	207, 228, 436, 451, 711, 726, 730
Tru1I	TTAA	4 cut(s)	189, 240, 560, 729
Tru9I	TTAA	4 cut(s)	189, 240, 560, 729
TscAI	CASTG	1 cut(s)	61
TseFI	GTSAC	3 cut(s)	50, 352, 737
TseI	GCWGC	2 cut(s)	157, 233
Tsp45I	GTSAC	3 cut(s)	50, 352, 737
TspDTI	ATGAA	1 cut(s)	672
TspGWI	ACGGA	1 cut(s)	390
TspRI	CASTG	1 cut(s)	61
VspI	ATTAAT	1 cut(s)	729
XapI	RAATTY	3 cut(s)	207, 451, 711
XmaJI	CCTAGG	1 cut(s)	526
XmnI	GAANNNNTTC	1 cut(s)	175
XspI	CTAG	2 cut(s)	221, 527
Zsp2I	ATGCAT	1 cut(s)	219

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.