Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0013107

Physical Location & Seq

Genomic Coordinates Forward (+)

19439505 .. 19442239

Gene Structure 2735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G214100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 453 bp

ATGTCAATGTCGCGAGACGCCGGCCTCCGTCGTACGACAAGTTTTGCCGCCGCATTCGCCGTCGTTATCTTCTCCCTCATCGCCGTCGCCCGCTGCTCCAACAATGACTCCGAGGTGACCTGCAGCCGAATCTGCGTAGCAGAGAACTGTAATTCTGTTGGGATTCGGTACGGAAAGTACTGCGGAGTAGGGTGGACCGGCTGCCCAGGGGAGAAGCCCTGCGATGATCTTGATGCTTGCTGCAAGATTCATGATGATTGTGTTGGCAAAAAAGGTATGACCGATATAAAATGCCATGAGAAGTTCAAGACCTGCATAAAGAAAGTACAAAAATCTGGGAAGGTTGGATTTTCTCAGCAGTGTCCTTATGAGACAGCTGTGCCTACAATGGTACAAGGTATGGATTTGGCTATCATGCTGAGCCAGTTTAGTAACTCGAAGCTCGAACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004620 GO:0004623 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005802 GO:0007275 GO:0008150 GO:0009555 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010033 GO:0012505 GO:0016043 GO:0016049 GO:0016298 GO:0016787 GO:0016788 GO:0022414 GO:0030154 GO:0030307 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045927 GO:0048229 GO:0048468 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051704 GO:0052689 GO:0060560 GO:0065007 GO:0071840 GO:0098791

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko00590 ko00591 ko00592 ko01100 ko01110 ko04014 ko04270 ko04972 ko04975 map00564 map00565 map00590 map00591 map00592 map01100 map01110 map04014 map04270 map04972 map04975

Pfam Domains

Protein Families

No domains found.

Protein Analysis

151

Amino Acids

16.29

Weight (kDa)

8.41

Isoelectric Point (pI)

24.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013107)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19690 AT2G19690 AT2G19690
fragaria_vesca	FvH4_1g06930
malus_domestica	MD02G1073600.v1.1 MD15G1203100.v1.1
prunus_persica	Prupe.7G214100_v2.0.a1
pyrus_communis	pycom02g05800 pycom15g18030
rosa_chinensis	RchiOBHm_Chr2g0092871
rosa_laevigata	RLG00000016339
rosa_multiflora	Rmu_sc0003262.1_g000020
rosa_roxburghii	Rroxscaffold_2G00148760
rosa_rugosa	Rorug02G0029800
rosa_samantha	Rh2BG076900 Rh2CG079200 Rh2DG074200
rosa_wichuraiana	Rw2G007050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	128, 320
AccII	CGCG	1 cut(s)	13
AciI	CCGC	4 cut(s)	48, 51, 91, 183
AcyI	GRCGYC	1 cut(s)	18
AfaI	GTAC	5 cut(s)	34, 170, 179, 327, 393
AgsI	TTSAA	1 cut(s)	307
AjnI	CCWGG	1 cut(s)	205
AluBI	AGCT	2 cut(s)	377, 442
AluI	AGCT	2 cut(s)	377, 442
Alw26I	GTCTC	2 cut(s)	9, 365
AoxI	GGCC	1 cut(s)	22
ApeKI	GCWGC	4 cut(s)	93, 123, 201, 240
AspS9I	GGNCC	1 cut(s)	195
AsuHPI	GGTGA	1 cut(s)	127
AvaII	GGWCC	1 cut(s)	195
BbvI	GCAGC	4 cut(s)	80, 135, 188, 227
BceAI	ACGGC	2 cut(s)	44, 68
BciT130I	CCWGG	1 cut(s)	207
BcoDI	GTCTC	2 cut(s)	9, 365
BfmI	CTRYAG	1 cut(s)	121
BfuAI	ACCTGC	2 cut(s)	128, 320
BisI	GCNGC	6 cut(s)	48, 51, 94, 124, 202, 241
BlpI	GCTNAGC	1 cut(s)	419
BlsI	GCNGC	6 cut(s)	49, 52, 95, 125, 203, 242
BmcAI	AGTACT	1 cut(s)	179
Bme1390I	CCNGG	1 cut(s)	207
Bme18I	GGWCC	1 cut(s)	195
BmgT120I	GGNCC	1 cut(s)	195
BmrFI	CCNGG	1 cut(s)	207
BmsI	GCATC	1 cut(s)	223
Bpu1102I	GCTNAGC	1 cut(s)	419
BsaHI	GRCGYC	1 cut(s)	18
BsaJI	CCNNGG	3 cut(s)	111, 205, 206
BsaXI	ACNNNNNCTCC	2 cut(s)	92, 122
Bse118I	RCCGGY	2 cut(s)	20, 197
Bse1I	ACTGG	1 cut(s)	424
BseBI	CCWGG	1 cut(s)	207
BseDI	CCNNGG	3 cut(s)	111, 205, 206
BseMII	CTCAG	2 cut(s)	368, 410
BseNI	ACTGG	1 cut(s)	424
BseXI	GCAGC	4 cut(s)	80, 135, 188, 227
Bsh1236I	CGCG	1 cut(s)	13
BshFI	GGCC	1 cut(s)	24
BsiSI	CCGG	2 cut(s)	21, 198
BsiWI	CGTACG	1 cut(s)	32
BsmAI	GTCTC	2 cut(s)	9, 365
BsmBI	CGTCTC	1 cut(s)	9
BsmI	GAATGC	1 cut(s)	53
BsnI	GGCC	1 cut(s)	24
Bsp143I	GATC	1 cut(s)	226
Bsp1720I	GCTNAGC	1 cut(s)	419
Bsp68I	TCGCGA	1 cut(s)	13
BspACI	CCGC	4 cut(s)	48, 51, 91, 183
BspANI	GGCC	1 cut(s)	24
BspCNI	CTCAG	2 cut(s)	367, 411
BspFNI	CGCG	1 cut(s)	13
BspHI	TCATGA	1 cut(s)	250
BspMAI	CTGCAG	1 cut(s)	125
BspMI	ACCTGC	2 cut(s)	128, 320
BsrFI	RCCGGY	2 cut(s)	20, 197
BsrI	ACTGG	1 cut(s)	424
BssAI	RCCGGY	2 cut(s)	20, 197
BssECI	CCNNGG	3 cut(s)	111, 205, 206
BssMI	GATC	1 cut(s)	226
BssNI	GRCGYC	1 cut(s)	18
Bst2UI	CCWGG	1 cut(s)	207
Bst4CI	ACNGT	1 cut(s)	149
BstACI	GRCGYC	1 cut(s)	18
BstC8I	GCNNGC	3 cut(s)	22, 91, 238
BstDEI	CTNAG	2 cut(s)	354, 419
BstEII	GGTNACC	1 cut(s)	115
BstFNI	CGCG	1 cut(s)	13
BstKTI	GATC	1 cut(s)	229
BstMAI	GTCTC	2 cut(s)	9, 365
BstMBI	GATC	1 cut(s)	226
BstMWI	GCNNNNNNNGC	2 cut(s)	56, 132
BstNI	CCWGG	1 cut(s)	207
BstPI	GGTNACC	1 cut(s)	115
BstSCI	CCNGG	1 cut(s)	205
BstSFI	CTRYAG	1 cut(s)	121
BstUI	CGCG	1 cut(s)	13
BstV1I	GCAGC	4 cut(s)	80, 135, 188, 227
BsuRI	GGCC	1 cut(s)	24
BtgZI	GCGATG	2 cut(s)	64, 237
BtsI	GCAGTG	1 cut(s)	365
BtsIMutI	CAGTG	1 cut(s)	365
BtuMI	TCGCGA	1 cut(s)	13
BveI	ACCTGC	2 cut(s)	128, 320
Cac8I	GCNNGC	3 cut(s)	22, 91, 238
CciI	TCATGA	1 cut(s)	250
Cfr10I	RCCGGY	2 cut(s)	20, 197
Cfr13I	GGNCC	1 cut(s)	195
CseI	GACGC	1 cut(s)	26
Csp6I	GTAC	5 cut(s)	33, 169, 178, 326, 392
CviAII	CATG	3 cut(s)	251, 296, 415
CviJI	RGCY	8 cut(s)	24, 126, 201, 217, 377, 410, 423, 442
CviKI_1	RGCY	8 cut(s)	24, 126, 201, 217, 377, 410, 423, 442
CviQI	GTAC	5 cut(s)	33, 169, 178, 326, 392
DdeI	CTNAG	2 cut(s)	354, 419
DpnI	GATC	1 cut(s)	228
DpnII	GATC	1 cut(s)	226
Eco47I	GGWCC	1 cut(s)	195
Eco91I	GGTNACC	1 cut(s)	115
EcoO65I	GGTNACC	1 cut(s)	115
EcoRII	CCWGG	1 cut(s)	205
Esp3I	CGTCTC	1 cut(s)	9
FaeI	CATG	3 cut(s)	254, 299, 418
FaiI	YATR	9 cut(s)	252, 278, 287, 297, 317, 369, 401, 416, 451
FatI	CATG	3 cut(s)	250, 295, 414
FauI	CCCGC	1 cut(s)	98
Fnu4HI	GCNGC	6 cut(s)	48, 51, 94, 124, 202, 241
Fsp4HI	GCNGC	6 cut(s)	48, 51, 94, 124, 202, 241
GluI	GCNGC	6 cut(s)	48, 51, 94, 124, 202, 241
HaeIII	GGCC	1 cut(s)	24
HapII	CCGG	2 cut(s)	21, 198
HgaI	GACGC	1 cut(s)	26
Hin1I	GRCGYC	1 cut(s)	18
Hin1II	CATG	3 cut(s)	254, 299, 418
HinfI	GANTC	4 cut(s)	107, 129, 163, 247
HpaII	CCGG	2 cut(s)	21, 198
HphI	GGTGA	1 cut(s)	127
Hpy166II	GTNNAC	1 cut(s)	195
Hpy188I	TCNGA	1 cut(s)	112
Hpy188III	TCNNGA	4 cut(s)	12, 230, 251, 307
Hpy8I	GTNNAC	1 cut(s)	195
Hpy99I	CGWCG	3 cut(s)	33, 65, 89
HpyAV	CCTTC	1 cut(s)	334
HpyCH4III	ACNGT	1 cut(s)	149
HpyCH4V	TGCA	3 cut(s)	123, 243, 315
HpyF10VI	GCNNNNNNNGC	2 cut(s)	56, 132
HpyF3I	CTNAG	2 cut(s)	354, 419
Hsp92I	GRCGYC	1 cut(s)	18
Hsp92II	CATG	3 cut(s)	254, 299, 418
KroI	GCCGGC	1 cut(s)	20
KroNI	GCCGGC	1 cut(s)	22
Kzo9I	GATC	1 cut(s)	226
LmnI	GCTCC	1 cut(s)	101
LpnPI	CCDG	9 cut(s)	34, 133, 192, 211, 219, 232, 321, 325, 437
Lsp1109I	GCAGC	4 cut(s)	80, 135, 188, 227
LweI	GCATC	1 cut(s)	223
MaeIII	GTNAC	2 cut(s)	115, 431
MalI	GATC	1 cut(s)	228
MboI	GATC	1 cut(s)	226
MboII	GAAGA	1 cut(s)	61
MluCI	AATT	1 cut(s)	151
MlyI	GAGTC	1 cut(s)	101
MmeI	TCCRAC	2 cut(s)	123, 325
MnlI	CCTC	3 cut(s)	35, 86, 106
MroNI	GCCGGC	1 cut(s)	20
MspA1I	CMGCKG	2 cut(s)	93, 377
MspI	CCGG	2 cut(s)	21, 198
MspR9I	CCNGG	1 cut(s)	207
Mva1269I	GAATGC	1 cut(s)	53
MvaI	CCWGG	1 cut(s)	207
MvnI	CGCG	1 cut(s)	13
MwoI	GCNNNNNNNGC	2 cut(s)	56, 132
NaeI	GCCGGC	1 cut(s)	22
NdeII	GATC	1 cut(s)	226
NgoMIV	GCCGGC	1 cut(s)	20
NlaIII	CATG	3 cut(s)	254, 299, 418
NmuCI	GTSAC	1 cut(s)	115
NruI	TCGCGA	1 cut(s)	13
PagI	TCATGA	1 cut(s)	250
PasI	CCCWGGG	1 cut(s)	206
PctI	GAATGC	1 cut(s)	53
PdiI	GCCGGC	1 cut(s)	22
PfeI	GAWTC	3 cut(s)	129, 163, 247
Pfl23II	CGTACG	1 cut(s)	32
PkrI	GCNGC	6 cut(s)	49, 52, 95, 125, 203, 242
PleI	GAGTC	1 cut(s)	101
PpsI	GAGTC	1 cut(s)	101
Psp6I	CCWGG	1 cut(s)	205
PspEI	GGTNACC	1 cut(s)	115
PspGI	CCWGG	1 cut(s)	205
PspLI	CGTACG	1 cut(s)	32
PspPI	GGNCC	1 cut(s)	195
PstI	CTGCAG	1 cut(s)	125
PvuII	CAGCTG	1 cut(s)	377
RruI	TCGCGA	1 cut(s)	13
RsaI	GTAC	5 cut(s)	34, 170, 179, 327, 393
RsaNI	GTAC	5 cut(s)	33, 169, 178, 326, 392
SatI	GCNGC	6 cut(s)	48, 51, 94, 124, 202, 241
Sau3AI	GATC	1 cut(s)	226
Sau96I	GGNCC	1 cut(s)	195
ScaI	AGTACT	1 cut(s)	179
SchI	GAGTC	1 cut(s)	101
ScrFI	CCNGG	1 cut(s)	207
SetI	ASST	8 cut(s)	117, 122, 277, 314, 345, 379, 400, 444
SfaNI	GCATC	1 cut(s)	223
SfcI	CTRYAG	1 cut(s)	121
SinI	GGWCC	1 cut(s)	195
Sse9I	AATT	1 cut(s)	151
SsiI	CCGC	4 cut(s)	48, 51, 91, 183
StyD4I	CCNGG	1 cut(s)	205
TaaI	ACNGT	1 cut(s)	149
TaqI	TCGA	2 cut(s)	437, 444
TaqII	GACCGA	1 cut(s)	296
TasI	AATT	1 cut(s)	151
TatI	WGTACW	2 cut(s)	177, 325
TauI	GCSGC	2 cut(s)	50, 53
TfiI	GAWTC	3 cut(s)	129, 163, 247
TscAI	CASTG	1 cut(s)	365
TseFI	GTSAC	1 cut(s)	115
TseI	GCWGC	4 cut(s)	93, 123, 201, 240
Tsp45I	GTSAC	1 cut(s)	115
TspDTI	ATGAA	1 cut(s)	239
TspGWI	ACGGA	2 cut(s)	17, 186
TspRI	CASTG	1 cut(s)	365
VpaK11BI	GGWCC	1 cut(s)	195
ZrmI	AGTACT	1 cut(s)	179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.