Prupe.7G233400_v2.0.a1

protein ABIL5 isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0013584
Physical Location & Seq
Reverse (-)
20359160 .. 20361709
2550 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G233400.1

Sequence Viewer

Length: 1014 bp
ATGGGTTTTGTTTTGTATTGTTTTCTCACTGCTAGCTTTAATGGGTTTTTTGTTTTCTCTCAAAAAAGCCTATGGTCACAGACTCACAGATATCACCTCTCTGTCTCTTTCTCTTGCTCAAACAAAAACAAGCCCCACCCCACTCACCCTCCAACAAGTTCAAAAAAACAGGGAGATAATCAGATAAGGAGAGAGCTTGTCTTCTTTGTCTTAATTCCCCTCTTTATCATTATCTCTTCTGCAAGTTTCACAAACATTTTACAGAAAAACATGGAGGAGATACAAAACTCTAAACCCTGTTCAGGACAAGATTCAGAAGCCAAGTCTAAGCCTATGGACATTGTAAGCTTTGATAAGTCTCTCCAGGAACTGAAAGACCTGCGCTCTCAACTTCATTATGCTGCCGACTACTGTGAATCAACATTCTTGAATGCCAAAGAGAAGAAAGTTGTGATGGACAACACCAAGGAGTATGTATGCAGAGCTGTGGTTACTGTTGTTGATCATCTTGGATGCGTTTCTGCCAACCTCAATGGCCTCATTTCTGAGACTAACGCATTTTCGGAGACCGAGCTTCGAATCGATTGCCTCAAACAAAGGCTTTTCTTATGTGAACAATACTCCCACAAGCTTGCTCTGCCTAAAGTCCGATGGAGGGAGATATTGCCCAGGCATAACGCACGTTTTTTATCAGCACTCAGAGATGCTGAGAAAACCAGTGAAGATTTGAGGGATCCTGCAACTCCAGCCTCTCGTAAAACCATCGACAATCATGAATTTGACAAAGAGGCAGCAATGCCACTTTTCTTGTACACATTATCTCACAAACCGTCTTTACCCGAGGGGGAAACTAATTCAGCTTTAGTTCCGGTTCGTGATGGCCTATCAATCCTGTCTAGAGGTCCAAATCCGACATTTCATTTCCAGGAATCTCGGAAGAATCGACGCCTCAAAAAATCTGGGCAGGGTCATGACATCTTGTCACTCATTAGACGAGCTAAAAGAACAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

338

Amino Acids

38.44

Weight (kDa)

9.31

Isoelectric Point (pI)

49.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 387
AclWI GGATC 2 cut(s) 728, 741
AcsI RAATTY 1 cut(s) 776
AcyI GRCGYC 1 cut(s) 946
AfaI GTAC 1 cut(s) 812
AfiI CCNNNNNNNGG 2 cut(s) 302, 655
AgsI TTSAA 2 cut(s) 162, 430
AhdI GACNNNNNGTC 1 cut(s) 979
AjnI CCWGG 3 cut(s) 363, 668, 924
AluBI AGCT 8 cut(s) 36, 196, 348, 485, 574, 631, 860, 998
AluI AGCT 8 cut(s) 36, 196, 348, 485, 574, 631, 860, 998
Alw26I GTCTC 4 cut(s) 109, 363, 542, 560
AlwI GGATC 2 cut(s) 728, 741
AlwNI CAGNNNCTG 1 cut(s) 370
Ama87I CYCGRG 1 cut(s) 839
AoxI GGCC 2 cut(s) 535, 880
ApeKI GCWGC 2 cut(s) 401, 791
ApoI RAATTY 1 cut(s) 776
AspLEI GCGC 1 cut(s) 384
AspS9I GGNCC 1 cut(s) 902
AsuHPI GGTGA 2 cut(s) 86, 137
AsuII TTCGAA 1 cut(s) 577
AsuNHI GCTAGC 1 cut(s) 32
AvaI CYCGRG 1 cut(s) 839
AvaII GGWCC 1 cut(s) 902
BamHI GGATCC 1 cut(s) 733
BbsI GAAGAC 1 cut(s) 193
BbvI GCAGC 2 cut(s) 388, 803
BccI CCATC 4 cut(s) 448, 645, 770, 872
BcgI CGANNNNNNTGC 2 cut(s) 567, 601
BciT130I CCWGG 3 cut(s) 365, 670, 926
BclI TGATCA 1 cut(s) 502
BcoDI GTCTC 4 cut(s) 109, 363, 542, 560
BfaI CTAG 2 cut(s) 33, 897
BfuAI ACCTGC 1 cut(s) 387
BisI GCNGC 2 cut(s) 402, 792
BlsI GCNGC 2 cut(s) 403, 793
Bme1390I CCNGG 3 cut(s) 365, 670, 926
Bme18I GGWCC 1 cut(s) 902
BmeRI GACNNNNNGTC 1 cut(s) 979
BmeT110I CYCGRG 1 cut(s) 839
BmgT120I GGNCC 1 cut(s) 902
BmiI GGNNCC 1 cut(s) 735
BmrFI CCNGG 3 cut(s) 365, 670, 926
BmsI GCATC 2 cut(s) 503, 694
BmtI GCTAGC 1 cut(s) 36
BpiI GAAGAC 1 cut(s) 193
BpmI CTGGAG 2 cut(s) 347, 729
Bpu14I TTCGAA 1 cut(s) 577
Bsa29I ATCGAT 1 cut(s) 582
BsaHI GRCGYC 1 cut(s) 946
BsaI GGTCTC 1 cut(s) 560
BsaJI CCNNGG 3 cut(s) 465, 668, 840
BsaWI WCCGGW 1 cut(s) 868
BsaXI ACNNNNNCTCC 2 cut(s) 133, 163
Bsc4I CCNNNNNNNGG 2 cut(s) 302, 655
Bse1I ACTGG 1 cut(s) 717
Bse3DI GCAATG 1 cut(s) 801
BseBI CCWGG 3 cut(s) 365, 670, 926
BseCI ATCGAT 1 cut(s) 582
BseDI CCNNGG 3 cut(s) 465, 668, 840
BseGI GGATG 1 cut(s) 518
BseLI CCNNNNNNNGG 2 cut(s) 302, 655
BseMI GCAATG 1 cut(s) 801
BseMII CTCAG 3 cut(s) 537, 699, 712
BseNI ACTGG 1 cut(s) 717
BseRI GAGGAG 1 cut(s) 290
BseXI GCAGC 2 cut(s) 388, 803
BshFI GGCC 2 cut(s) 537, 882
BshVI ATCGAT 1 cut(s) 582
BsiHKCI CYCGRG 1 cut(s) 839
BsiSI CCGG 1 cut(s) 869
BslI CCNNNNNNNGG 2 cut(s) 302, 655
BsmAI GTCTC 4 cut(s) 109, 363, 542, 560
BsmI GAATGC 1 cut(s) 436
BsnI GGCC 2 cut(s) 537, 882
Bso31I GGTCTC 1 cut(s) 560
BsoBI CYCGRG 1 cut(s) 839
Bsp119I TTCGAA 1 cut(s) 577
Bsp1407I TGTACA 1 cut(s) 810
Bsp143I GATC 2 cut(s) 502, 733
BspANI GGCC 2 cut(s) 537, 882
BspCNI CTCAG 3 cut(s) 538, 700, 711
BspDI ATCGAT 1 cut(s) 582
BspHI TCATGA 2 cut(s) 772, 970
BspLI GGNNCC 1 cut(s) 735
BspMI ACCTGC 1 cut(s) 387
BspOI GCTAGC 1 cut(s) 36
BspPI GGATC 2 cut(s) 728, 741
BspT104I TTCGAA 1 cut(s) 577
BspTNI GGTCTC 1 cut(s) 560
BsrDI GCAATG 1 cut(s) 801
BsrGI TGTACA 1 cut(s) 810
BsrI ACTGG 1 cut(s) 717
BssECI CCNNGG 3 cut(s) 465, 668, 840
BssMI GATC 2 cut(s) 502, 733
BssNI GRCGYC 1 cut(s) 946
BssT1I CCWWGG 1 cut(s) 465
Bst2UI CCWGG 3 cut(s) 365, 670, 926
Bst4CI ACNGT 4 cut(s) 413, 496, 831, 1009
Bst6I CTCTTC 1 cut(s) 241
BstACI GRCGYC 1 cut(s) 946
BstAUI TGTACA 1 cut(s) 810
BstBI TTCGAA 1 cut(s) 577
BstC8I GCNNGC 2 cut(s) 34, 633
BstDEI CTNAG 4 cut(s) 327, 546, 698, 708
BstF5I GGATG 1 cut(s) 518
BstHHI GCGC 1 cut(s) 384
BstKTI GATC 2 cut(s) 505, 736
BstMAI GTCTC 4 cut(s) 109, 363, 542, 560
BstMBI GATC 2 cut(s) 502, 733
BstMWI GCNNNNNNNGC 2 cut(s) 637, 746
BstNI CCWGG 3 cut(s) 365, 670, 926
BstSCI CCNGG 3 cut(s) 363, 668, 924
BstV1I GCAGC 2 cut(s) 388, 803
BstV2I GAAGAC 1 cut(s) 193
BstX2I RGATCY 1 cut(s) 733
BstYI RGATCY 1 cut(s) 733
Bsu15I ATCGAT 1 cut(s) 582
BsuRI GGCC 2 cut(s) 537, 882
BsuTUI ATCGAT 1 cut(s) 582
BtsCI GGATG 1 cut(s) 518
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 2 cut(s) 27, 724
BveI ACCTGC 1 cut(s) 387
Cac8I GCNNGC 2 cut(s) 34, 633
CaiI CAGNNNCTG 1 cut(s) 370
CciI TCATGA 2 cut(s) 772, 970
CfoI GCGC 1 cut(s) 384
Cfr13I GGNCC 1 cut(s) 902
ClaI ATCGAT 1 cut(s) 582
CseI GACGC 1 cut(s) 954
Csp6I GTAC 1 cut(s) 811
CspCI CAANNNNNGTGG 2 cut(s) 789, 824
CviAII CATG 3 cut(s) 271, 773, 971
CviQI GTAC 1 cut(s) 811
DdeI CTNAG 4 cut(s) 327, 546, 698, 708
DpnI GATC 2 cut(s) 504, 735
DpnII GATC 2 cut(s) 502, 733
DriI GACNNNNNGTC 1 cut(s) 979
Eam1104I CTCTTC 1 cut(s) 241
Eam1105I GACNNNNNGTC 1 cut(s) 979
EarI CTCTTC 1 cut(s) 241
Eco130I CCWWGG 1 cut(s) 465
Eco31I GGTCTC 1 cut(s) 560
Eco32I GATATC 1 cut(s) 92
Eco47I GGWCC 1 cut(s) 902
Eco88I CYCGRG 1 cut(s) 839
EcoRII CCWGG 3 cut(s) 363, 668, 924
EcoRV GATATC 1 cut(s) 92
EcoT14I CCWWGG 1 cut(s) 465
ErhI CCWWGG 1 cut(s) 465
FaeI CATG 3 cut(s) 274, 776, 974
FatI CATG 3 cut(s) 270, 772, 970
FbaI TGATCA 1 cut(s) 502
Fnu4HI GCNGC 2 cut(s) 402, 792
FokI GGATG 1 cut(s) 525
Fsp4HI GCNGC 2 cut(s) 402, 792
FspBI CTAG 2 cut(s) 33, 897
GlaI GCGC 1 cut(s) 383
GluI GCNGC 2 cut(s) 402, 792
GsuI CTGGAG 2 cut(s) 347, 729
HaeIII GGCC 2 cut(s) 537, 882
HapII CCGG 1 cut(s) 869
HgaI GACGC 1 cut(s) 954
HhaI GCGC 1 cut(s) 384
Hin1I GRCGYC 1 cut(s) 946
Hin1II CATG 3 cut(s) 274, 776, 974
Hin6I GCGC 1 cut(s) 382
HinP1I GCGC 1 cut(s) 382
HindIII AAGCTT 2 cut(s) 346, 629
HinfI GANTC 6 cut(s) 82, 311, 416, 579, 929, 940
HpaII CCGG 1 cut(s) 869
HphI GGTGA 2 cut(s) 86, 137
Hpy166II GTNNAC 2 cut(s) 614, 813
Hpy188I TCNGA 8 cut(s) 183, 316, 547, 565, 650, 701, 912, 936
Hpy188III TCNNGA 6 cut(s) 303, 427, 773, 875, 897, 971
Hpy8I GTNNAC 2 cut(s) 614, 813
Hpy99I CGWCG 1 cut(s) 948
HpyCH4III ACNGT 4 cut(s) 413, 496, 831, 1009
HpyCH4IV ACGT 1 cut(s) 682
HpyCH4V TGCA 3 cut(s) 242, 480, 740
HpyF10VI GCNNNNNNNGC 2 cut(s) 637, 746
HpyF3I CTNAG 4 cut(s) 327, 546, 698, 708
HpySE526I ACGT 1 cut(s) 682
Hsp92I GRCGYC 1 cut(s) 946
Hsp92II CATG 3 cut(s) 274, 776, 974
HspAI GCGC 1 cut(s) 382
Ksp22I TGATCA 1 cut(s) 502
Kzo9I GATC 2 cut(s) 502, 733
Lsp1109I GCAGC 2 cut(s) 388, 803
LweI GCATC 2 cut(s) 503, 694
MaeI CTAG 2 cut(s) 33, 897
MaeII ACGT 1 cut(s) 682
MaeIII GTNAC 3 cut(s) 75, 490, 981
MalI GATC 2 cut(s) 504, 735
MboI GATC 2 cut(s) 502, 733
MboII GAAGA 5 cut(s) 193, 228, 454, 734, 949
MflI RGATCY 1 cut(s) 733
MluCI AATT 3 cut(s) 213, 776, 853
MlyI GAGTC 1 cut(s) 76
MmeI TCCRAC 2 cut(s) 176, 935
MseI TTAA 2 cut(s) 39, 212
MspI CCGG 1 cut(s) 869
MspR9I CCNGG 3 cut(s) 365, 670, 926
Mva1269I GAATGC 1 cut(s) 436
MvaI CCWGG 3 cut(s) 365, 670, 926
MwoI GCNNNNNNNGC 2 cut(s) 637, 746
NdeII GATC 2 cut(s) 502, 733
NheI GCTAGC 1 cut(s) 32
NlaIII CATG 3 cut(s) 274, 776, 974
NlaIV GGNNCC 1 cut(s) 735
NmuCI GTSAC 2 cut(s) 75, 981
NspV TTCGAA 1 cut(s) 577
PagI TCATGA 2 cut(s) 772, 970
PcsI WCGNNNNNNNCGW 1 cut(s) 940
PctI GAATGC 1 cut(s) 436
PfeI GAWTC 5 cut(s) 311, 416, 579, 929, 940
PfoI TCCNGGA 2 cut(s) 363, 924
PkrI GCNGC 2 cut(s) 403, 793
PleI GAGTC 1 cut(s) 76
PpsI GAGTC 1 cut(s) 76
Psp6I CCWGG 3 cut(s) 363, 668, 924
PspGI CCWGG 3 cut(s) 363, 668, 924
PspN4I GGNNCC 1 cut(s) 735
PspPI GGNCC 1 cut(s) 902
PstNI CAGNNNCTG 1 cut(s) 370
PsuI RGATCY 1 cut(s) 733
RsaI GTAC 1 cut(s) 812
RsaNI GTAC 1 cut(s) 811
SaqAI TTAA 2 cut(s) 39, 212
SatI GCNGC 2 cut(s) 402, 792
Sau3AI GATC 2 cut(s) 502, 733
Sau96I GGNCC 1 cut(s) 902
SchI GAGTC 1 cut(s) 76
ScrFI CCNGG 3 cut(s) 365, 670, 926
SfaNI GCATC 2 cut(s) 503, 694
SfuI TTCGAA 1 cut(s) 577
SinI GGWCC 1 cut(s) 902
Sse9I AATT 3 cut(s) 213, 776, 853
SspMI CTAG 2 cut(s) 33, 897
StyD4I CCNGG 3 cut(s) 363, 668, 924
StyI CCWWGG 1 cut(s) 465
TaaI ACNGT 4 cut(s) 413, 496, 831, 1009
TaiI ACGT 1 cut(s) 685
TaqI TCGA 4 cut(s) 577, 582, 765, 943
TaqII GACCGA 1 cut(s) 584
TasI AATT 3 cut(s) 213, 776, 853
TatI WGTACW 1 cut(s) 810
TfiI GAWTC 5 cut(s) 311, 416, 579, 929, 940
Tru1I TTAA 2 cut(s) 39, 212
Tru9I TTAA 2 cut(s) 39, 212
TscAI CASTG 2 cut(s) 34, 724
TseFI GTSAC 2 cut(s) 75, 981
TseI GCWGC 2 cut(s) 401, 791
Tsp45I GTSAC 2 cut(s) 75, 981
TspDTI ATGAA 3 cut(s) 383, 789, 908
TspRI CASTG 2 cut(s) 34, 724
VpaK11BI GGWCC 1 cut(s) 902
XapI RAATTY 1 cut(s) 776
XbaI TCTAGA 1 cut(s) 896
XspI CTAG 2 cut(s) 33, 897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.