Prupe.7G250200_v2.0.a1

Synaptotagmin-5-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
21173982 .. 21179643
5662 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G250200.1

Sequence Viewer

Length: 1755 bp
ATGGGCTTCGTTTTCGGATTAGTGCTCGGAATTCTAGTGGGACTCGCAATTATCGTGGTGTTTGTCCGCTTGGAGAACCACCGATCCAAGCTCCGTTCCGAGCTCGCCACAACTGTAGCTGCTTTTGCTCGAATGACTGTCGAGGATTCTAGAAAGCTCTTACCTTCTGAGTATTACCCTTCTTGGGTCGTCTTCTCCCACAGACAGAAGTTGAGCTCCCAACTCTACCTCTTCTTCCTCTACTTTCTCTCACTTTCATCTGCGTTAAAATGGCTCAATCTTCATCTTCAAAAGATCTGGCCCTATGTTAATGAGGCAGCGTCTGAGCTGATAAAGACTTCAGTGGAGCCAATTCTGGAGCAGTATAGACCAATGATATTGTCCTCACTCAAATTTTCCAAGTTCACTCTTGGTACCGTGGCACCGCAGTTTACAGGGGTTTCTATAATTGAAGATGAAGGTGACGGTGTTACAATGGAGTTGGAAATGCAGTGGGATGGAAATCCAAGTATAATACTTGCTATCAAGACTTTACTTGGTGTAAGCCTACCTGTGCAGGTGAAAGATATTGGATTCACTGGGGTATTCAGGCTGATTTTCAAGCCTTTGGTTGATGAGTTTCCGTGCTTTGGAGCTGTTTGCTATTCATTGAGAGAAAAGAAAAATTTAGAGTTTAGGCTTAAAGTTGTGGGTGGCGACATATCTACAATACCTGGGATCTATGATGCAATTGAGGGGATGATACGGGATGCGATTGAGGATTCAATTGCATGGCCTGTTCGCAAAGTTGTTCCCATTTTGCCTGGGGATTATAGTGATCTGGAGTTAAAGCCAGTCGGAATGCTAGAGGTGAAACTTGTGCAGGCAAAGGATTTAACAAATAAAGACCTTATTGGAAAGTCAGATCCCTATGCTGTAGTATACATACGACCTTTACAGGACAGAATGAAGAAAAGCAAAACTATTAACAATGATTTGAATCCGATCTGGAATGAGCACTTTGAATTTATTGTTGAAGATGCATCCACTCAACATCTGGTGGTTAAAGTTTATGATGATGAGGGAGTTCAGTCATCTGAGCTCATTGGATGTGCTCATGTACTACTAAGTGAACTTCAGCCTGGTAAAGTGAAGGATGTGTGGTTGAAGCTGGTTAAAAGCTTGGAAGTCCAAAGAGATAATAAAAACCGCGGGCAGGTACATTTGGAGCTGTTATATTGTCCATTTGGCATGGAGAATGGCTTTGTCAACCCGTTTACTCCCAACTTCTCAATGACCTCTTTGGAAAAGGTACTTAAAAGTGGGATGAATGGAACAGAAGCTACTGAAACTCCAAAGGAAGCCACACAGAAGAGAAAGGAGGTCATAATTAGAGGTGTACTTTCTGTTACTATAATATCTGCTGAAGACTTGCCGCCAGTTGATCTGATAGGAAAAGCTGATCCTTATGTGGTACTGACCTTGAAGAAATCAGAAACAAAAAACAAAACTAGGGTGGTTAATGACAGCTTGAATCCTGTTTGGAATCAAACTTTTGACTTTGTTGTTGAGGATGGATTGCATGACATGCTCATTATTGAAGTCTGGGACCATGATACTTTTGGGAAGGACTACATAGGCAGATGCATCATGACCCTCACTAGGGTTATATTAGAAGGGGAATACAAAGACTCTCTACCGCTAGATGGGGCCAAATCTGGGAAATTGAACGTGCAGCTTAAGTGGATGCCACAACCAATTTACCGTGATTCTTGA

Protein Analysis

585

Amino Acids

65.91

Weight (kDa)

5.76

Isoelectric Point (pI)

31.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 547
Acc36I ACCTGC 2 cut(s) 547, 1186
Acc65I GGTACC 1 cut(s) 413
AccB1I GGYRCC 2 cut(s) 413, 421
AccI GTMKAC 1 cut(s) 921
AccII CGCG 1 cut(s) 1191
AciI CCGC 6 cut(s) 67, 425, 1189, 1191, 1415, 1679
AclWI GGATC 4 cut(s) 78, 725, 899, 1436
AcsI RAATTY 4 cut(s) 30, 392, 664, 1004
AcuI CTGAAG 3 cut(s) 324, 1100, 1425
AfaI GTAC 6 cut(s) 415, 1101, 1200, 1293, 1380, 1455
AfiI CCNNNNNNNGG 7 cut(s) 184, 629, 1195, 1641, 1642, 1685, 1698
AflII CTTAAG 1 cut(s) 1718
AjnI CCWGG 3 cut(s) 712, 802, 1120
AloI GAACNNNNNNTCC 2 cut(s) 68, 100
Alw21I GWGCWC 6 cut(s) 27, 105, 218, 999, 1083, 1096
AlwI GGATC 4 cut(s) 78, 725, 899, 1436
AlwNI CAGNNNCTG 1 cut(s) 323
AoxI GGCC 3 cut(s) 299, 773, 1689
ApeKI GCWGC 3 cut(s) 119, 317, 1714
ApoI RAATTY 4 cut(s) 30, 392, 664, 1004
Asp718I GGTACC 1 cut(s) 413
AspS9I GGNCC 3 cut(s) 300, 1588, 1689
AsuHPI GGTGA 3 cut(s) 473, 571, 862
AvaII GGWCC 1 cut(s) 1588
BanI GGYRCC 2 cut(s) 413, 421
BanII GRGCYC 3 cut(s) 105, 218, 1083
BbsI GAAGAC 2 cut(s) 184, 1413
Bbv12I GWGCWC 6 cut(s) 27, 105, 218, 999, 1083, 1096
BbvI GCAGC 3 cut(s) 106, 329, 1726
BccI CCATC 3 cut(s) 491, 1547, 1679
BciT130I CCWGG 3 cut(s) 714, 804, 1122
BfaI CTAG 6 cut(s) 35, 150, 845, 1491, 1641, 1682
BfmI CTRYAG 2 cut(s) 114, 915
BfrI CTTAAG 1 cut(s) 1718
BfuAI ACCTGC 2 cut(s) 547, 1186
BglII AGATCT 1 cut(s) 294
BisI GCNGC 4 cut(s) 120, 318, 1415, 1715
BlsI GCNGC 4 cut(s) 121, 319, 1416, 1716
Bme1390I CCNGG 3 cut(s) 714, 804, 1122
Bme18I GGWCC 1 cut(s) 1588
BmgT120I GGNCC 3 cut(s) 300, 1588, 1689
BmiI GGNNCC 5 cut(s) 348, 415, 423, 1589, 1690
BmrFI CCNGG 3 cut(s) 714, 804, 1122
BmrI ACTGGG 1 cut(s) 588
BmsI GCATC 7 cut(s) 715, 739, 1009, 1031, 1613, 1635, 1716
BmuI ACTGGG 1 cut(s) 588
BpiI GAAGAC 2 cut(s) 184, 1413
BpmI CTGGAG 2 cut(s) 377, 842
BsaBI GATNNNNATC 2 cut(s) 501, 978
BsaJI CCNNGG 4 cut(s) 417, 713, 803, 1189
BsaXI ACNNNNNCTCC 2 cut(s) 1315, 1345
Bsc4I CCNNNNNNNGG 7 cut(s) 184, 629, 1195, 1641, 1642, 1685, 1698
Bse1I ACTGG 3 cut(s) 583, 833, 1418
Bse8I GATNNNNATC 2 cut(s) 501, 978
BseBI CCWGG 3 cut(s) 714, 804, 1122
BseDI CCNNGG 4 cut(s) 417, 713, 803, 1189
BseGI GGATG 9 cut(s) 502, 744, 754, 1022, 1094, 1141, 1311, 1558, 1731
BseJI GATNNNNATC 2 cut(s) 501, 978
BseLI CCNNNNNNNGG 7 cut(s) 184, 629, 1195, 1641, 1642, 1685, 1698
BseMII CTCAG 3 cut(s) 159, 315, 1068
BseNI ACTGG 3 cut(s) 583, 833, 1418
BseXI GCAGC 3 cut(s) 106, 329, 1726
BsgI GTGCAG 3 cut(s) 575, 881, 1733
Bsh1236I CGCG 1 cut(s) 1191
BshFI GGCC 3 cut(s) 301, 775, 1691
BshNI GGYRCC 2 cut(s) 413, 421
BsiHKAI GWGCWC 6 cut(s) 27, 105, 218, 999, 1083, 1096
BslFI GGGAC 2 cut(s) 54, 1601
BslI CCNNNNNNNGG 7 cut(s) 184, 629, 1195, 1641, 1642, 1685, 1698
BsmFI GGGAC 2 cut(s) 54, 1601
BsmI GAATGC 1 cut(s) 846
BsnI GGCC 3 cut(s) 301, 775, 1691
Bsp1286I GDGCHC 6 cut(s) 27, 105, 218, 999, 1083, 1096
Bsp143I GATC 8 cut(s) 83, 294, 717, 817, 904, 984, 1423, 1441
BspACI CCGC 6 cut(s) 67, 425, 1189, 1191, 1415, 1679
BspANI GGCC 3 cut(s) 301, 775, 1691
BspCNI CTCAG 3 cut(s) 160, 316, 1069
BspFNI CGCG 1 cut(s) 1191
BspHI TCATGA 1 cut(s) 1629
BspLI GGNNCC 5 cut(s) 348, 415, 423, 1589, 1690
BspMI ACCTGC 2 cut(s) 547, 1186
BspPI GGATC 4 cut(s) 78, 725, 899, 1436
BspT107I GGYRCC 2 cut(s) 413, 421
BspTI CTTAAG 1 cut(s) 1718
BsrI ACTGG 3 cut(s) 583, 833, 1418
BssECI CCNNGG 4 cut(s) 417, 713, 803, 1189
BssMI GATC 8 cut(s) 83, 294, 717, 817, 904, 984, 1423, 1441
BssNAI GTATAC 1 cut(s) 922
Bst1107I GTATAC 1 cut(s) 922
Bst2UI CCWGG 3 cut(s) 714, 804, 1122
Bst4CI ACNGT 5 cut(s) 115, 139, 418, 467, 1745
Bst6I CTCTTC 2 cut(s) 236, 1346
BstAFI CTTAAG 1 cut(s) 1718
BstAPI GCANNNNNTGC 1 cut(s) 1567
BstC8I GCNNGC 3 cut(s) 105, 864, 1193
BstDEI CTNAG 4 cut(s) 168, 324, 1077, 1106
BstDSI CCRYGG 2 cut(s) 417, 1189
BstF5I GGATG 9 cut(s) 502, 744, 754, 1022, 1094, 1141, 1311, 1558, 1731
BstFNI CGCG 1 cut(s) 1191
BstKTI GATC 8 cut(s) 86, 297, 720, 820, 907, 987, 1426, 1444
BstMBI GATC 8 cut(s) 83, 294, 717, 817, 904, 984, 1423, 1441
BstMWI GCNNNNNNNGC 2 cut(s) 125, 1567
BstNI CCWGG 3 cut(s) 714, 804, 1122
BstNSI RCATGY 1 cut(s) 1570
BstSCI CCNGG 3 cut(s) 712, 802, 1120
BstSFI CTRYAG 2 cut(s) 114, 915
BstUI CGCG 1 cut(s) 1191
BstV1I GCAGC 3 cut(s) 106, 329, 1726
BstV2I GAAGAC 2 cut(s) 184, 1413
BstX2I RGATCY 3 cut(s) 294, 717, 904
BstYI RGATCY 3 cut(s) 294, 717, 904
BstZ17I GTATAC 1 cut(s) 922
BsuRI GGCC 3 cut(s) 301, 775, 1691
BtgI CCRYGG 2 cut(s) 417, 1189
BtsCI GGATG 9 cut(s) 502, 744, 754, 1022, 1094, 1141, 1311, 1558, 1731
BtsI GCAGTG 1 cut(s) 497
BtsIMutI CAGTG 3 cut(s) 348, 497, 576
BveI ACCTGC 2 cut(s) 547, 1186
Cac8I GCNNGC 3 cut(s) 105, 864, 1193
CaiI CAGNNNCTG 1 cut(s) 323
CciI TCATGA 1 cut(s) 1629
Cfr13I GGNCC 3 cut(s) 300, 1588, 1689
Cfr42I CCGCGG 1 cut(s) 1192
CseI GACGC 1 cut(s) 309
Csp6I GTAC 6 cut(s) 414, 1100, 1199, 1292, 1379, 1454
CspCI CAANNNNNGTGG 2 cut(s) 36, 71
CviAII CATG 7 cut(s) 771, 1097, 1231, 1562, 1567, 1592, 1630
CviQI GTAC 6 cut(s) 414, 1100, 1199, 1292, 1379, 1454
DdeI CTNAG 4 cut(s) 168, 324, 1077, 1106
DpnI GATC 8 cut(s) 85, 296, 719, 819, 906, 986, 1425, 1443
DpnII GATC 8 cut(s) 83, 294, 717, 817, 904, 984, 1423, 1441
Eam1104I CTCTTC 2 cut(s) 236, 1346
EarI CTCTTC 2 cut(s) 236, 1346
Ecl136II GAGCTC 3 cut(s) 103, 216, 1081
Eco24I GRGCYC 3 cut(s) 105, 218, 1083
Eco47I GGWCC 1 cut(s) 1588
Eco53kI GAGCTC 3 cut(s) 103, 216, 1081
Eco57I CTGAAG 3 cut(s) 324, 1100, 1425
EcoICRI GAGCTC 3 cut(s) 103, 216, 1081
EcoRI GAATTC 1 cut(s) 30
EcoRII CCWGG 3 cut(s) 712, 802, 1120
EcoT22I ATGCAT 2 cut(s) 1024, 1628
EcoT38I GRGCYC 3 cut(s) 105, 218, 1083
FaeI CATG 7 cut(s) 774, 1100, 1234, 1565, 1570, 1595, 1633
FaqI GGGAC 2 cut(s) 54, 1601
FatI CATG 7 cut(s) 770, 1096, 1230, 1561, 1566, 1591, 1629
FauI CCCGC 1 cut(s) 1184
FblI GTMKAC 1 cut(s) 921
Fnu4HI GCNGC 4 cut(s) 120, 318, 1415, 1715
FokI GGATG 9 cut(s) 509, 751, 761, 1009, 1101, 1148, 1318, 1565, 1738
FriOI GRGCYC 3 cut(s) 105, 218, 1083
Fsp4HI GCNGC 4 cut(s) 120, 318, 1415, 1715
FspBI CTAG 6 cut(s) 35, 150, 845, 1491, 1641, 1682
GluI GCNGC 4 cut(s) 120, 318, 1415, 1715
GsuI CTGGAG 2 cut(s) 377, 842
HaeIII GGCC 3 cut(s) 301, 775, 1691
HgaI GACGC 1 cut(s) 309
Hin1II CATG 7 cut(s) 774, 1100, 1234, 1565, 1570, 1595, 1633
HincII GTYRAC 1 cut(s) 1249
HindII GTYRAC 1 cut(s) 1249
HindIII AAGCTT 1 cut(s) 1159
HinfI GANTC 9 cut(s) 42, 146, 573, 761, 979, 1513, 1525, 1670, 1748
HphI GGTGA 3 cut(s) 473, 571, 862
Hpy166II GTNNAC 7 cut(s) 405, 432, 922, 1112, 1249, 1257, 1379
Hpy188III TCNNGA 7 cut(s) 150, 356, 526, 821, 988, 1630, 1752
Hpy8I GTNNAC 7 cut(s) 405, 432, 922, 1112, 1249, 1257, 1379
HpyAV CCTTC 6 cut(s) 174, 189, 452, 1126, 1600, 1649
HpyCH4III ACNGT 5 cut(s) 115, 139, 418, 467, 1745
HpyCH4IV ACGT 1 cut(s) 1710
HpyCH4V TGCA 9 cut(s) 490, 556, 728, 770, 862, 1022, 1561, 1626, 1714
HpyF10VI GCNNNNNNNGC 2 cut(s) 125, 1567
HpyF3I CTNAG 4 cut(s) 168, 324, 1077, 1106
HpySE526I ACGT 1 cut(s) 1710
Hsp92II CATG 7 cut(s) 774, 1100, 1234, 1565, 1570, 1595, 1633
KpnI GGTACC 1 cut(s) 417
KspI CCGCGG 1 cut(s) 1192
Kzo9I GATC 8 cut(s) 83, 294, 717, 817, 904, 984, 1423, 1441
LmnI GCTCC 6 cut(s) 96, 221, 346, 358, 632, 1207
Lsp1109I GCAGC 3 cut(s) 106, 329, 1726
LweI GCATC 7 cut(s) 715, 739, 1009, 1031, 1613, 1635, 1716
MaeI CTAG 6 cut(s) 35, 150, 845, 1491, 1641, 1682
MaeII ACGT 1 cut(s) 1710
MaeIII GTNAC 3 cut(s) 461, 469, 1387
MalI GATC 8 cut(s) 85, 296, 719, 819, 906, 986, 1425, 1443
MboI GATC 8 cut(s) 83, 294, 717, 817, 904, 984, 1423, 1441
MfeI CAATTG 2 cut(s) 729, 765
MflI RGATCY 3 cut(s) 294, 717, 904
MhlI GDGCHC 6 cut(s) 27, 105, 218, 999, 1083, 1096
MlyI GAGTC 2 cut(s) 36, 1664
MmeI TCCRAC 2 cut(s) 462, 817
Mph1103I ATGCAT 2 cut(s) 1024, 1628
MspA1I CMGCKG 1 cut(s) 1191
MspCI CTTAAG 1 cut(s) 1718
MspR9I CCNGG 3 cut(s) 714, 804, 1122
MunI CAATTG 2 cut(s) 729, 765
Mva1269I GAATGC 1 cut(s) 846
MvaI CCWGG 3 cut(s) 714, 804, 1122
MvnI CGCG 1 cut(s) 1191
MwoI GCNNNNNNNGC 2 cut(s) 125, 1567
NdeII GATC 8 cut(s) 83, 294, 717, 817, 904, 984, 1423, 1441
NlaIII CATG 7 cut(s) 774, 1100, 1234, 1565, 1570, 1595, 1633
NlaIV GGNNCC 5 cut(s) 348, 415, 423, 1589, 1690
NmuCI GTSAC 1 cut(s) 461
NsiI ATGCAT 2 cut(s) 1024, 1628
NspI RCATGY 1 cut(s) 1570
PagI TCATGA 1 cut(s) 1629
PaqCI CACCTGC 1 cut(s) 547
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PctI GAATGC 1 cut(s) 846
PfeI GAWTC 7 cut(s) 146, 573, 761, 979, 1513, 1525, 1748
PkrI GCNGC 4 cut(s) 121, 319, 1416, 1716
PleI GAGTC 2 cut(s) 36, 1664
PpsI GAGTC 2 cut(s) 36, 1664
Psp124BI GAGCTC 3 cut(s) 105, 218, 1083
Psp6I CCWGG 3 cut(s) 712, 802, 1120
PspGI CCWGG 3 cut(s) 712, 802, 1120
PspN4I GGNNCC 5 cut(s) 348, 415, 423, 1589, 1690
PspPI GGNCC 3 cut(s) 300, 1588, 1689
PsrI GAACNNNNNNTAC 2 cut(s) 1306, 1338
PstNI CAGNNNCTG 1 cut(s) 323
PsuI RGATCY 3 cut(s) 294, 717, 904
RsaI GTAC 6 cut(s) 415, 1101, 1200, 1293, 1380, 1455
RsaNI GTAC 6 cut(s) 414, 1100, 1199, 1292, 1379, 1454
SacI GAGCTC 3 cut(s) 105, 218, 1083
SacII CCGCGG 1 cut(s) 1192
SatI GCNGC 4 cut(s) 120, 318, 1415, 1715
Sau3AI GATC 8 cut(s) 83, 294, 717, 817, 904, 984, 1423, 1441
Sau96I GGNCC 3 cut(s) 300, 1588, 1689
SchI GAGTC 2 cut(s) 36, 1664
ScrFI CCNGG 3 cut(s) 714, 804, 1122
SduI GDGCHC 6 cut(s) 27, 105, 218, 999, 1083, 1096
SfaNI GCATC 7 cut(s) 715, 739, 1009, 1031, 1613, 1635, 1716
SfcI CTRYAG 2 cut(s) 114, 915
Sfr303I CCGCGG 1 cut(s) 1192
SgrBI CCGCGG 1 cut(s) 1192
SinI GGWCC 1 cut(s) 1588
SmlI CTYRAG 1 cut(s) 1718
SmoI CTYRAG 1 cut(s) 1718
SsiI CCGC 6 cut(s) 67, 425, 1189, 1191, 1415, 1679
SspMI CTAG 6 cut(s) 35, 150, 845, 1491, 1641, 1682
SstI GAGCTC 3 cut(s) 105, 218, 1083
StyD4I CCNGG 3 cut(s) 712, 802, 1120
TaaI ACNGT 5 cut(s) 115, 139, 418, 467, 1745
TaiI ACGT 1 cut(s) 1713
TaqI TCGA 2 cut(s) 130, 141
TatI WGTACW 2 cut(s) 1099, 1378
TauI GCSGC 1 cut(s) 1417
TfiI GAWTC 7 cut(s) 146, 573, 761, 979, 1513, 1525, 1748
TscAI CASTG 3 cut(s) 348, 497, 583
TseFI GTSAC 1 cut(s) 461
TseI GCWGC 3 cut(s) 119, 317, 1714
Tsp45I GTSAC 1 cut(s) 461
TspDTI ATGAA 6 cut(s) 246, 272, 471, 636, 962, 1322
TspGWI ACGGA 2 cut(s) 83, 612
TspRI CASTG 3 cut(s) 348, 497, 583
Vha464I CTTAAG 1 cut(s) 1718
VpaK11BI GGWCC 1 cut(s) 1588
XapI RAATTY 4 cut(s) 30, 392, 664, 1004
XbaI TCTAGA 1 cut(s) 149
XceI RCATGY 1 cut(s) 1570
XcmI CCANNNNNNNNNTGG 2 cut(s) 1033, 1598
XmiI GTMKAC 1 cut(s) 921
XspI CTAG 6 cut(s) 35, 150, 845, 1491, 1641, 1682
Zsp2I ATGCAT 2 cut(s) 1024, 1628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.