Rorug06G0273600

Synaptotagmin-like mitochondrial-lipid-binding domain

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
42088827 .. 42091963
3137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0273600.1

Sequence Viewer

Length: 1140 bp
ATGATGAAGCTTTCCTGCAATGCGGTGGACCAAATCCACGGCGGGGCCCAATGCCGCTTCTTGGGCCCGCAGAAGTCCCGGCCCGGCTTCGCTCGCCGCCGGAAAGAAGCTCCGCCTTCGATTGTTACGTACAGCGGTGGTTCGCCTTCGTCGAGGAGGGGGATTGTGGCGGTGGTGTCGGACCGGGGAGCCGTGGGCGCCGAGAATGGGCCGGGTCGGGTCGAGCCCATCAGCCTGGCGGACCGGCTGAGGCAGGGGAGCTTGGCGGAGGACGGCAAGTCGTATAGGGAGTGCTTTATAGTCAGGAGCTATGAGGTTGGGATGAACAAGACTGCTACTGTGGAGACGATTGCCAATCTGTTGCAGGAGGTTGGATGCAACCATGCTCAAGTTGTGGGATTTTCAACCGACGGGTTTGCAACGACCACCACCATGAGGGAATTGCATCTAATATGGGTTACTGCTCGCATGCACATTGAAATCTACAAATATCCAGCTTGGAGTGATGTTGTTGAAATAGAAACGTGGTGCCAAGGGGAAGGGAGAATTGGAACTAGACGTGATTGGATACTTAAGGACTATGCCACTGGGCAAGTCATTGGAAGAGCGACAAGCAAGTGGGTGATGATGAACCAAGACACTAGGAGGCTTCAGAAAGTCAGTGATGATGTTCGCGAAGAGCATCTAGCTTTTGCTCCACGAGAGCTAAGATTAGCATTCCCAGAGAAGAACAATAGTAGCTTGAAGAAAATAGCTAAACTAGAAGACCCTGCTCAGTATTCCAGACTAGGACTCGTGCCAAGGAGAGCAGACCTGGACATGAACCAGCATGTTAATAATGTCACCTACATAGGATGGGTTCTAGAGAGCATGCCTCAAGAAGTCATTGATAGCCATGAACTCCAGACTATCACCTTAGATTACAGGCGAGAGTGTCAACAAGATGACATAGTCGATTCCCTTACTAATGTGGAAAATGTAGAGAATGCTGAAGTGAGTTTGAAGGGAACAAATGGGTCTCCTGCTGCAACAGAAAATCAAAACGACTACCGTCAGTTCTTGCATCTACTGAGAATATCAGGTGATGGATCAGAAATAAACAGAGGACGCACAGTGTGGAGAAAGAAACCGGCAAGATGA

Protein Analysis

379

Amino Acids

42.62

Weight (kDa)

8.46

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyl-ACP_TE PF01643 92 - 227 7.7e-44 Acyl-ACP thioesterase N-terminal domain
Acyl-ACP_TE_C PF20791 256 - 375 3e-28 Acyl-ACP thioesterase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000336)

Species Orthologous Gene IDs
malus_domestica MD05G1024100.v1.1
rosa_chinensis RchiOBHm_Chr2g0152291 RchiOBHm_Chr4g0387411
rosa_laevigata RLG00000009698 RLG00000009699 RLG00000009700 RLG00000023615 RLG00000024265 RLG00000034445 RLG00000036567
rosa_multiflora Rmu_co8268067.1_g000001 Rmu_co8313555.1_g000001 Rmu_co8324697.1_g000001 Rmu_sc0000318.1_g000023 Rmu_sc0000342.1_g000016 Rmu_sc0000447.1_g000010 Rmu_sc0000528.1_g000009 Rmu_sc0000539.1_g000060 Rmu_sc0000929.1_g000023 Rmu_sc0001493.1_g000081 Rmu_sc0001674.1_g000003 Rmu_sc0001791.1_g000023 Rmu_sc0001822.1_g000005 Rmu_sc0001822.1_g000033 Rmu_sc0002061.1_g000010 Rmu_sc0002286.1_g000012 Rmu_sc0002979.1_g000009 Rmu_sc0003158.1_g000016 Rmu_sc0003221.1_g000001 Rmu_sc0003641.1_g000029 Rmu_sc0003742.1_g000012 Rmu_sc0003814.1_g000004 Rmu_sc0003823.1_g000005 Rmu_sc0004002.1_g000005 Rmu_sc0004564.1_g000005 Rmu_sc0005415.1_g000003 Rmu_sc0006050.1_g000025 Rmu_sc0006555.1_g000002 Rmu_sc0009954.1_g000020 Rmu_sc0010421.1_g000007 Rmu_sc0010607.1_g000002 Rmu_sc0011044.1_g000005 Rmu_sc0011497.1_g000015 Rmu_sc0014532.1_g000004 Rmu_sc0014745.1_g000005 Rmu_sc0014821.1_g000001 Rmu_sc0015038.1_g000002 Rmu_sc0015454.1_g000004 Rmu_sc0019663.1_g000002 Rmu_sc0027475.1_g000003 Rmu_sc0028826.1_g000002 Rmu_ssc0000117.1_g000019 Rmu_ssc0000175.1_g000034
rosa_roxburghii Rroxscaffold_3G00237080 Rroxscaffold_4G00288290 Rroxscaffold_6G00397510
rosa_rugosa Rorug01G0035000 Rorug01G0190900 Rorug01G0208500 Rorug01G0208600 Rorug01G0208600 Rorug01G0344900 Rorug01G0479500 Rorug01G0479600 Rorug02G0230400 Rorug02G0320900 Rorug02G0433300 Rorug03G0147400 Rorug03G0169700.1 Rorug03G0169800 Rorug03G0198300 Rorug04G0022900 Rorug04G0064600 Rorug04G0322100 Rorug04G0388900 Rorug05G0153200 Rorug05G0231600 Rorug05G0231700 Rorug05G0231800 Rorug05G0276200 Rorug05G0292400 Rorug05G0314700 Rorug06G0092000 Rorug06G0260900 Rorug06G0273600 RorugPtG0003200
rosa_samantha Rh1AG264100 Rh1AG292500 Rh1AG423800 Rh2AG098000 Rh2AG232700 Rh2AG361100 Rh2AG372900 Rh2BG099200 Rh2BG246000 Rh2BG260600 Rh2BG378400 Rh3BG142300 Rh3BG252900 Rh3BG267700 Rh3DG302400 Rh5BG059800 Rh5BG320000 Rh5BG530500 Rh6AG089300 Rh6AG089400 Rh6AG127400 Rh6AG376700 Rh7CG488700 Rh7DG265900
rosa_wichuraiana Rw2G040640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 197, 528
AccII CGCG 1 cut(s) 675
AclWI GGATC 1 cut(s) 1096
AcuI CTGAAG 2 cut(s) 635, 1011
AcyI GRCGYC 1 cut(s) 198
AdeI CACNNNGTG 1 cut(s) 1116
AfaI GTAC 1 cut(s) 131
AfiI CCNNNNNNNGG 4 cut(s) 43, 61, 207, 435
AflII CTTAAG 1 cut(s) 572
AgsI TTSAA 5 cut(s) 405, 479, 515, 745, 1003
AhdI GACNNNNNGTC 1 cut(s) 277
AjiI CACGTC 1 cut(s) 560
AjnI CCWGG 2 cut(s) 234, 813
AjuI GAANNNNNNNTTGG 2 cut(s) 531, 563
AluBI AGCT 9 cut(s) 10, 110, 261, 309, 497, 689, 706, 741, 755
AluI AGCT 9 cut(s) 10, 110, 261, 309, 497, 689, 706, 741, 755
Alw26I GTCTC 2 cut(s) 338, 1023
AlwI GGATC 1 cut(s) 1096
AoxI GGCC 4 cut(s) 45, 64, 80, 209
ApaI GGGCCC 2 cut(s) 49, 68
ApeKI GCWGC 1 cut(s) 1025
AspLEI GCGC 1 cut(s) 200
AspS9I GGNCC 9 cut(s) 28, 45, 46, 64, 65, 81, 181, 209, 241
AsuC2I CCSGG 4 cut(s) 79, 84, 185, 213
AsuHPI GGTGA 4 cut(s) 634, 835, 904, 1094
AvaII GGWCC 3 cut(s) 28, 181, 241
BaeGI GKGCMC 2 cut(s) 49, 68
BanI GGYRCC 2 cut(s) 197, 528
BanII GRGCYC 3 cut(s) 49, 68, 228
BauI CACGAG 2 cut(s) 699, 794
BbsI GAAGAC 1 cut(s) 771
BbvCI CCTCAGC 1 cut(s) 248
BbvI GCAGC 1 cut(s) 1012
BccI CCATC 3 cut(s) 236, 849, 1079
BceAI ACGGC 3 cut(s) 55, 176, 289
BcgI CGANNNNNNTGC 2 cut(s) 398, 432
BciT130I CCWGG 2 cut(s) 236, 815
BciVI GTATCC 1 cut(s) 561
BcnI CCSGG 4 cut(s) 79, 84, 185, 213
BcoDI GTCTC 2 cut(s) 338, 1023
BfaI CTAG 6 cut(s) 555, 642, 686, 761, 788, 863
BfoI RGCGCY 1 cut(s) 201
BfrI CTTAAG 1 cut(s) 572
BfuI GTATCC 1 cut(s) 561
BisI GCNGC 3 cut(s) 55, 97, 1026
BlsI GCNGC 3 cut(s) 56, 98, 1027
Bme1390I CCNGG 6 cut(s) 79, 84, 185, 213, 236, 815
Bme18I GGWCC 3 cut(s) 28, 181, 241
BmeRI GACNNNNNGTC 1 cut(s) 277
BmgBI CACGTC 1 cut(s) 560
BmgT120I GGNCC 9 cut(s) 28, 45, 46, 64, 65, 81, 181, 209, 241
BmiI GGNNCC 6 cut(s) 46, 47, 66, 190, 199, 530
BmrFI CCNGG 6 cut(s) 79, 84, 185, 213, 236, 815
BmrI ACTGGG 1 cut(s) 597
BmsI GCATC 4 cut(s) 365, 454, 691, 1072
BmuI ACTGGG 1 cut(s) 597
BoxI GACNNNNGTC 1 cut(s) 1050
BpiI GAAGAC 1 cut(s) 771
BplI GAGNNNNNCTC 2 cut(s) 859, 891
BpmI CTGGAG 1 cut(s) 887
Bpu10I CCTNAGC 1 cut(s) 248
BpuEI CTTGAG 2 cut(s) 372, 861
BpuMI CCSGG 4 cut(s) 79, 84, 185, 213
BsaAI YACGTR 1 cut(s) 129
BsaHI GRCGYC 1 cut(s) 198
BsaI GGTCTC 1 cut(s) 1023
BsaJI CCNNGG 5 cut(s) 37, 184, 192, 532, 800
Bsc4I CCNNNNNNNGG 4 cut(s) 43, 61, 207, 435
Bse118I RCCGGY 2 cut(s) 243, 1129
Bse1I ACTGG 1 cut(s) 592
Bse3DI GCAATG 1 cut(s) 25
BseBI CCWGG 2 cut(s) 236, 815
BseDI CCNNGG 5 cut(s) 37, 184, 192, 532, 800
BseGI GGATG 3 cut(s) 327, 380, 860
BseLI CCNNNNNNNGG 4 cut(s) 43, 61, 207, 435
BseMI GCAATG 1 cut(s) 25
BseMII CTCAG 3 cut(s) 239, 788, 1061
BseNI ACTGG 1 cut(s) 592
BseRI GAGGAG 1 cut(s) 169
BseSI GKGCMC 2 cut(s) 49, 68
BseXI GCAGC 1 cut(s) 1012
Bsh1236I CGCG 1 cut(s) 675
BshFI GGCC 4 cut(s) 47, 66, 82, 211
BshNI GGYRCC 2 cut(s) 197, 528
BsiSI CCGG 7 cut(s) 79, 84, 100, 184, 212, 244, 1130
BslFI GGGAC 1 cut(s) 61
BslI CCNNNNNNNGG 4 cut(s) 43, 61, 207, 435
BsmAI GTCTC 2 cut(s) 338, 1023
BsmBI CGTCTC 1 cut(s) 338
BsmFI GGGAC 1 cut(s) 61
BsmI GAATGC 2 cut(s) 716, 991
BsnI GGCC 4 cut(s) 47, 66, 82, 211
Bso31I GGTCTC 1 cut(s) 1023
Bsp120I GGGCCC 2 cut(s) 45, 64
Bsp1286I GDGCHC 3 cut(s) 49, 68, 228
Bsp143I GATC 1 cut(s) 1088
Bsp68I TCGCGA 1 cut(s) 675
BspANI GGCC 4 cut(s) 47, 66, 82, 211
BspCNI CTCAG 3 cut(s) 240, 787, 1062
BspFNI CGCG 1 cut(s) 675
BspLI GGNNCC 6 cut(s) 46, 47, 66, 190, 199, 530
BspPI GGATC 1 cut(s) 1096
BspQI GCTCTTC 2 cut(s) 598, 672
BspT107I GGYRCC 2 cut(s) 197, 528
BspTI CTTAAG 1 cut(s) 572
BspTNI GGTCTC 1 cut(s) 1023
BsrDI GCAATG 1 cut(s) 25
BsrFI RCCGGY 2 cut(s) 243, 1129
BsrI ACTGG 1 cut(s) 592
BssAI RCCGGY 2 cut(s) 243, 1129
BssECI CCNNGG 5 cut(s) 37, 184, 192, 532, 800
BssMI GATC 1 cut(s) 1088
BssNI GRCGYC 1 cut(s) 198
BssSI CACGAG 2 cut(s) 699, 794
BssT1I CCWWGG 2 cut(s) 532, 800
Bst2BI CACGAG 2 cut(s) 699, 794
Bst2UI CCWGG 2 cut(s) 236, 815
Bst4CI ACNGT 3 cut(s) 340, 1052, 1114
Bst6I CTCTTC 2 cut(s) 598, 672
BstACI GRCGYC 1 cut(s) 198
BstAFI CTTAAG 1 cut(s) 572
BstBAI YACGTR 1 cut(s) 129
BstC8I GCNNGC 5 cut(s) 68, 94, 466, 470, 872
BstDEI CTNAG 5 cut(s) 248, 707, 774, 916, 1070
BstDSI CCRYGG 2 cut(s) 37, 192
BstF5I GGATG 3 cut(s) 327, 380, 860
BstFNI CGCG 1 cut(s) 675
BstH2I RGCGCY 1 cut(s) 201
BstHHI GCGC 1 cut(s) 200
BstKTI GATC 1 cut(s) 1091
BstMAI GTCTC 2 cut(s) 338, 1023
BstMBI GATC 1 cut(s) 1088
BstMWI GCNNNNNNNGC 3 cut(s) 63, 93, 197
BstNI CCWGG 2 cut(s) 236, 815
BstNSI RCATGY 3 cut(s) 472, 833, 874
BstPAI GACNNNNGTC 1 cut(s) 1050
BstSCI CCNGG 6 cut(s) 77, 82, 183, 211, 234, 813
BstSLI GKGCMC 2 cut(s) 49, 68
BstSNI TACGTA 1 cut(s) 129
BstUI CGCG 1 cut(s) 675
BstV1I GCAGC 1 cut(s) 1012
BstV2I GAAGAC 1 cut(s) 771
BstXI CCANNNNNNTGG 1 cut(s) 235
BsuI GTATCC 1 cut(s) 561
BsuRI GGCC 4 cut(s) 47, 66, 82, 211
BtgI CCRYGG 2 cut(s) 37, 192
BtrI CACGTC 1 cut(s) 560
BtsCI GGATG 3 cut(s) 327, 380, 860
BtsIMutI CAGTG 3 cut(s) 585, 667, 1119
BtuMI TCGCGA 1 cut(s) 675
Cac8I GCNNGC 5 cut(s) 68, 94, 466, 470, 872
CfoI GCGC 1 cut(s) 200
Cfr10I RCCGGY 2 cut(s) 243, 1129
Cfr13I GGNCC 9 cut(s) 28, 45, 46, 64, 65, 81, 181, 209, 241
CpoI CGGWCCG 2 cut(s) 181, 241
CseI GACGC 1 cut(s) 1116
Csp6I GTAC 1 cut(s) 130
CspI CGGWCCG 2 cut(s) 181, 241
CviAII CATG 7 cut(s) 383, 433, 469, 820, 830, 871, 896
CviQI GTAC 1 cut(s) 130
DdeI CTNAG 5 cut(s) 248, 707, 774, 916, 1070
DinI GGCGCC 1 cut(s) 199
DpnI GATC 1 cut(s) 1090
DpnII GATC 1 cut(s) 1088
DraIII CACNNNGTG 1 cut(s) 1116
DriI GACNNNNNGTC 1 cut(s) 277
Eam1104I CTCTTC 2 cut(s) 598, 672
Eam1105I GACNNNNNGTC 1 cut(s) 277
EarI CTCTTC 2 cut(s) 598, 672
EciI GGCGGA 3 cut(s) 102, 254, 281
Eco105I TACGTA 1 cut(s) 129
Eco130I CCWWGG 2 cut(s) 532, 800
Eco24I GRGCYC 3 cut(s) 49, 68, 228
Eco31I GGTCTC 1 cut(s) 1023
Eco47I GGWCC 3 cut(s) 28, 181, 241
Eco57I CTGAAG 2 cut(s) 635, 1011
EcoO109I RGGNCCY 1 cut(s) 45
EcoRII CCWGG 2 cut(s) 234, 813
EcoT14I CCWWGG 2 cut(s) 532, 800
EcoT38I GRGCYC 3 cut(s) 49, 68, 228
EgeI GGCGCC 1 cut(s) 199
EheI GGCGCC 1 cut(s) 199
ErhI CCWWGG 2 cut(s) 532, 800
Esp3I CGTCTC 1 cut(s) 338
FaeI CATG 7 cut(s) 386, 436, 472, 823, 833, 874, 899
FaqI GGGAC 1 cut(s) 61
FatI CATG 7 cut(s) 382, 432, 468, 819, 829, 870, 895
FauI CCCGC 2 cut(s) 35, 75
Fnu4HI GCNGC 3 cut(s) 55, 97, 1026
FokI GGATG 3 cut(s) 334, 387, 867
FriOI GRGCYC 3 cut(s) 49, 68, 228
Fsp4HI GCNGC 3 cut(s) 55, 97, 1026
FspBI CTAG 6 cut(s) 555, 642, 686, 761, 788, 863
GlaI GCGC 1 cut(s) 199
GluI GCNGC 3 cut(s) 55, 97, 1026
GsuI CTGGAG 1 cut(s) 887
HaeII RGCGCY 1 cut(s) 201
HaeIII GGCC 4 cut(s) 47, 66, 82, 211
HapII CCGG 7 cut(s) 79, 84, 100, 184, 212, 244, 1130
HgaI GACGC 1 cut(s) 1116
HhaI GCGC 1 cut(s) 200
Hin1I GRCGYC 1 cut(s) 198
Hin1II CATG 7 cut(s) 386, 436, 472, 823, 833, 874, 899
Hin6I GCGC 1 cut(s) 198
HinP1I GCGC 1 cut(s) 198
HincII GTYRAC 1 cut(s) 938
HindII GTYRAC 1 cut(s) 938
HindIII AAGCTT 1 cut(s) 8
HinfI GANTC 2 cut(s) 792, 956
HpaII CCGG 7 cut(s) 79, 84, 100, 184, 212, 244, 1130
HphI GGTGA 4 cut(s) 634, 835, 904, 1094
Hpy166II GTNNAC 2 cut(s) 28, 938
Hpy188I TCNGA 3 cut(s) 181, 654, 1093
Hpy188III TCNNGA 6 cut(s) 304, 674, 783, 863, 878, 904
Hpy8I GTNNAC 2 cut(s) 28, 938
Hpy99I CGWCG 2 cut(s) 154, 413
HpyAV CCTTC 4 cut(s) 126, 156, 533, 997
HpyCH4III ACNGT 3 cut(s) 340, 1052, 1114
HpyCH4IV ACGT 3 cut(s) 128, 524, 559
HpyCH4V TGCA 8 cut(s) 18, 364, 378, 419, 445, 472, 1028, 1063
HpyF10VI GCNNNNNNNGC 3 cut(s) 63, 93, 197
HpyF3I CTNAG 5 cut(s) 248, 707, 774, 916, 1070
HpySE526I ACGT 3 cut(s) 128, 524, 559
Hsp92I GRCGYC 1 cut(s) 198
Hsp92II CATG 7 cut(s) 386, 436, 472, 823, 833, 874, 899
HspAI GCGC 1 cut(s) 198
KasI GGCGCC 1 cut(s) 197
Kzo9I GATC 1 cut(s) 1088
LguI GCTCTTC 2 cut(s) 598, 672
LmnI GCTCC 5 cut(s) 115, 188, 258, 306, 700
Lsp1109I GCAGC 1 cut(s) 1012
LweI GCATC 4 cut(s) 365, 454, 691, 1072
MaeI CTAG 6 cut(s) 555, 642, 686, 761, 788, 863
MaeII ACGT 3 cut(s) 128, 524, 559
MaeIII GTNAC 3 cut(s) 124, 457, 841
MalI GATC 1 cut(s) 1090
MboI GATC 1 cut(s) 1088
MboII GAAGA 5 cut(s) 615, 689, 739, 757, 776
MhlI GDGCHC 3 cut(s) 49, 68, 228
MluCI AATT 2 cut(s) 440, 546
Mly113I GGCGCC 1 cut(s) 198
MlyI GAGTC 1 cut(s) 786
MmeI TCCRAC 2 cut(s) 159, 352
MseI TTAA 2 cut(s) 573, 834
MslI CAYNNNNRTG 1 cut(s) 431
MspA1I CMGCKG 1 cut(s) 135
MspCI CTTAAG 1 cut(s) 572
MspI CCGG 7 cut(s) 79, 84, 100, 184, 212, 244, 1130
MspR9I CCNGG 6 cut(s) 79, 84, 185, 213, 236, 815
Mva1269I GAATGC 2 cut(s) 716, 991
MvaI CCWGG 2 cut(s) 236, 815
MvnI CGCG 1 cut(s) 675
MwoI GCNNNNNNNGC 3 cut(s) 63, 93, 197
NarI GGCGCC 1 cut(s) 198
NciI CCSGG 4 cut(s) 79, 84, 185, 213
NdeII GATC 1 cut(s) 1088
NlaIII CATG 7 cut(s) 386, 436, 472, 823, 833, 874, 899
NlaIV GGNNCC 6 cut(s) 46, 47, 66, 190, 199, 530
NmeAIII GCCGAG 1 cut(s) 226
NmuCI GTSAC 1 cut(s) 841
NruI TCGCGA 1 cut(s) 675
NspI RCATGY 3 cut(s) 472, 833, 874
PaeI GCATGC 2 cut(s) 472, 874
PciSI GCTCTTC 2 cut(s) 598, 672
PcsI WCGNNNNNNNCGW 2 cut(s) 125, 149
PctI GAATGC 2 cut(s) 716, 991
PfeI GAWTC 1 cut(s) 956
PflFI GACNNNGTC 1 cut(s) 950
PkrI GCNGC 3 cut(s) 56, 98, 1027
PleI GAGTC 1 cut(s) 786
PluTI GGCGCC 1 cut(s) 201
PpsI GAGTC 1 cut(s) 786
Ppu21I YACGTR 1 cut(s) 129
PshAI GACNNNNGTC 1 cut(s) 1050
Psp6I CCWGG 2 cut(s) 234, 813
PspGI CCWGG 2 cut(s) 234, 813
PspN4I GGNNCC 6 cut(s) 46, 47, 66, 190, 199, 530
PspOMI GGGCCC 2 cut(s) 45, 64
PspPI GGNCC 9 cut(s) 28, 45, 46, 64, 65, 81, 181, 209, 241
PsyI GACNNNGTC 1 cut(s) 950
RruI TCGCGA 1 cut(s) 675
RsaI GTAC 1 cut(s) 131
RsaNI GTAC 1 cut(s) 130
RseI CAYNNNNRTG 1 cut(s) 431
Rsr2I CGGWCCG 2 cut(s) 181, 241
RsrII CGGWCCG 2 cut(s) 181, 241
SapI GCTCTTC 2 cut(s) 598, 672
SaqAI TTAA 2 cut(s) 573, 834
SatI GCNGC 3 cut(s) 55, 97, 1026
Sau3AI GATC 1 cut(s) 1088
Sau96I GGNCC 9 cut(s) 28, 45, 46, 64, 65, 81, 181, 209, 241
SchI GAGTC 1 cut(s) 786
ScrFI CCNGG 6 cut(s) 79, 84, 185, 213, 236, 815
SduI GDGCHC 3 cut(s) 49, 68, 228
SfaNI GCATC 4 cut(s) 365, 454, 691, 1072
SfoI GGCGCC 1 cut(s) 199
SinI GGWCC 3 cut(s) 28, 181, 241
SmiMI CAYNNNNRTG 1 cut(s) 431
SmlI CTYRAG 3 cut(s) 387, 572, 876
SmoI CTYRAG 3 cut(s) 387, 572, 876
SnaBI TACGTA 1 cut(s) 129
SphI GCATGC 2 cut(s) 472, 874
Sse9I AATT 2 cut(s) 440, 546
SspDI GGCGCC 1 cut(s) 197
SspMI CTAG 6 cut(s) 555, 642, 686, 761, 788, 863
StyD4I CCNGG 6 cut(s) 77, 82, 183, 211, 234, 813
StyI CCWWGG 2 cut(s) 532, 800
TaaI ACNGT 3 cut(s) 340, 1052, 1114
TaiI ACGT 3 cut(s) 131, 527, 562
TaqI TCGA 4 cut(s) 119, 152, 222, 954
TasI AATT 2 cut(s) 440, 546
TauI GCSGC 2 cut(s) 57, 99
TfiI GAWTC 1 cut(s) 956
Tru1I TTAA 2 cut(s) 573, 834
Tru9I TTAA 2 cut(s) 573, 834
TscAI CASTG 3 cut(s) 592, 667, 1119
TseFI GTSAC 1 cut(s) 841
TseI GCWGC 1 cut(s) 1025
Tsp45I GTSAC 1 cut(s) 841
TspDTI ATGAA 5 cut(s) 20, 338, 644, 836, 912
TspRI CASTG 3 cut(s) 592, 667, 1119
Tth111I GACNNNGTC 1 cut(s) 950
Vha464I CTTAAG 1 cut(s) 572
VpaK11BI GGWCC 3 cut(s) 28, 181, 241
XbaI TCTAGA 1 cut(s) 862
XceI RCATGY 3 cut(s) 472, 833, 874
XspI CTAG 6 cut(s) 555, 642, 686, 761, 788, 863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.