Rmu_sc0000447.1_g000010

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000447.1
OG0000336
Physical Location & Seq
Forward (+)
63082 .. 66181
3100 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000447.1_g000010.1.cds

Sequence Viewer

Length: 1335 bp
atgctgtggacgaaatggcagtatgcctggcggtcagatggccgtaagctgggggatctcaggccatcgaaggggggaggactgtcatggaggctcaatgacccgtatactgcccaggcgcacggagatcggtttctcttcactctaacggacccttttgaccataaccgcattctccggggcgcgccgtggggctttgatcgagcaccagtggtcttggctccttatgatggaatcggggatctgatgcatgtaccattatcttctttggaactttggatcaaggtgaggggccttccaccggcataccattctgatcggtgtttgaggcagcttggaagtgccctaggtcggtttatacagaaaaacactaccgagttcgatgctggtcggatctggattagggttgaggttgacttgctacaaccgatggtgctccatcggaagtgtggtattttgactcatgttggcgtgccttgtgttggaccaccattaccgggcaagatctggtgtttggaaccagaacagtcgagtttagcaaggtttgcaagtttaaatgtgcataaacctaaaccccgacgtgaaattcagatttgtgctaggcgtgcaaagaagaatgctgataaggctgtggtggaagctggtgaagctgaaccggaaaatagggaacagcagggggaggttgtactgccagtagggaaagaccttgtcccagttgcggatagagtggctcaagcaattgaagctaaaaaggtgttggatgccgtggatagcatggccctggaggagtctgctgctgcagggacagagcaggttctgaaggcagtgatttattgccgccggaaaagggtcgatgacgatggagtgtcgcccaagaaaccgaggttgagtttggttgtgggaagaacaaacatggatgttgagtccataggattgactacttggaaaaaggtgttggagacggcgaggaaaagaggcagaccaaggggagtcaagaataaggctaagactgagggtaagggtcggagaagtctaggtggttgcggcggtgtccggcgaggtagttgcggtgaggagggtcagaagaaagacggcggagagagagaagtaggaagccatggatttggggaattggattataaaaatccgattgggttcgttcgttcattgaacttggcctgcgacaagtcaaggctagccaccacatcttccggagacgctaggaattgcgctcaagcaccatcgccgccgtcagctaatcagcactctttgggtttaggctcactaaccaaagctttaatcaaattgttgagaaatggtgaaaattgtagatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

444

Amino Acids

48.77

Weight (kDa)

9.7

Isoelectric Point (pI)

46.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000336)

Species Orthologous Gene IDs
malus_domestica MD05G1024100.v1.1
rosa_chinensis RchiOBHm_Chr2g0152291 RchiOBHm_Chr4g0387411
rosa_laevigata RLG00000009698 RLG00000009699 RLG00000009700 RLG00000023615 RLG00000024265 RLG00000034445 RLG00000036567
rosa_multiflora Rmu_co8268067.1_g000001 Rmu_co8313555.1_g000001 Rmu_co8324697.1_g000001 Rmu_sc0000318.1_g000023 Rmu_sc0000342.1_g000016 Rmu_sc0000447.1_g000010 Rmu_sc0000528.1_g000009 Rmu_sc0000539.1_g000060 Rmu_sc0000929.1_g000023 Rmu_sc0001493.1_g000081 Rmu_sc0001674.1_g000003 Rmu_sc0001791.1_g000023 Rmu_sc0001822.1_g000005 Rmu_sc0001822.1_g000033 Rmu_sc0002061.1_g000010 Rmu_sc0002286.1_g000012 Rmu_sc0002979.1_g000009 Rmu_sc0003158.1_g000016 Rmu_sc0003221.1_g000001 Rmu_sc0003641.1_g000029 Rmu_sc0003742.1_g000012 Rmu_sc0003814.1_g000004 Rmu_sc0003823.1_g000005 Rmu_sc0004002.1_g000005 Rmu_sc0004564.1_g000005 Rmu_sc0005415.1_g000003 Rmu_sc0006050.1_g000025 Rmu_sc0006555.1_g000002 Rmu_sc0009954.1_g000020 Rmu_sc0010421.1_g000007 Rmu_sc0010607.1_g000002 Rmu_sc0011044.1_g000005 Rmu_sc0011497.1_g000015 Rmu_sc0014532.1_g000004 Rmu_sc0014745.1_g000005 Rmu_sc0014821.1_g000001 Rmu_sc0015038.1_g000002 Rmu_sc0015454.1_g000004 Rmu_sc0019663.1_g000002 Rmu_sc0027475.1_g000003 Rmu_sc0028826.1_g000002 Rmu_ssc0000117.1_g000019 Rmu_ssc0000175.1_g000034
rosa_roxburghii Rroxscaffold_3G00237080 Rroxscaffold_4G00288290 Rroxscaffold_6G00397510
rosa_rugosa Rorug01G0035000 Rorug01G0190900 Rorug01G0208500 Rorug01G0208600 Rorug01G0208600 Rorug01G0344900 Rorug01G0479500 Rorug01G0479600 Rorug02G0230400 Rorug02G0320900 Rorug02G0433300 Rorug03G0147400 Rorug03G0169700.1 Rorug03G0169800 Rorug03G0198300 Rorug04G0022900 Rorug04G0064600 Rorug04G0322100 Rorug04G0388900 Rorug05G0153200 Rorug05G0231600 Rorug05G0231700 Rorug05G0231800 Rorug05G0276200 Rorug05G0292400 Rorug05G0314700 Rorug06G0092000 Rorug06G0260900 Rorug06G0273600 RorugPtG0003200
rosa_samantha Rh1AG264100 Rh1AG292500 Rh1AG423800 Rh2AG098000 Rh2AG232700 Rh2AG361100 Rh2AG372900 Rh2BG099200 Rh2BG246000 Rh2BG260600 Rh2BG378400 Rh3BG142300 Rh3BG252900 Rh3BG267700 Rh3DG302400 Rh5BG059800 Rh5BG320000 Rh5BG530500 Rh6AG089300 Rh6AG089400 Rh6AG127400 Rh6AG376700 Rh7CG488700 Rh7DG265900
rosa_wichuraiana Rw2G040640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1140
Acc36I ACCTGC 1 cut(s) 802
AccI GTMKAC 1 cut(s) 107
AccII CGCG 1 cut(s) 185
AccIII TCCGGA 1 cut(s) 1211
AciI CCGC 9 cut(s) 31, 169, 719, 838, 1044, 1047, 1068, 1095, 1247
AclWI GGATC 4 cut(s) 63, 249, 287, 401
AcoI YGGCCR 1 cut(s) 40
AcsI RAATTY 1 cut(s) 585
AcuI CTGAAG 1 cut(s) 839
AfaI GTAC 2 cut(s) 255, 687
AfiI CCNNNNNNNGG 9 cut(s) 49, 71, 230, 301, 351, 482, 497, 718, 847
AgsI TTSAA 2 cut(s) 743, 1171
AjiI CACGTC 1 cut(s) 581
AjnI CCWGG 3 cut(s) 26, 114, 780
AjuI GAANNNNNNNTTGG 2 cut(s) 938, 970
AluBI AGCT 7 cut(s) 49, 334, 641, 650, 746, 1256, 1295
AluI AGCT 7 cut(s) 49, 334, 641, 650, 746, 1256, 1295
Alw21I GWGCWC 2 cut(s) 208, 438
Alw26I GTCTC 2 cut(s) 953, 1209
AlwI GGATC 4 cut(s) 63, 249, 287, 401
AlwNI CAGNNNCTG 1 cut(s) 817
Aor13HI TCCGGA 1 cut(s) 1211
AoxI GGCC 5 cut(s) 40, 62, 292, 777, 1176
ApeKI GCWGC 3 cut(s) 331, 794, 797
ApoI RAATTY 1 cut(s) 585
AscI GGCGCGCC 1 cut(s) 183
AspA2I CCTAGG 1 cut(s) 346
AspLEI GCGC 4 cut(s) 121, 185, 187, 1232
AspS9I GGNCC 4 cut(s) 151, 292, 485, 778
AsuC2I CCSGG 2 cut(s) 179, 498
AsuHPI GGTGA 4 cut(s) 298, 656, 1082, 1331
AsuNHI GCTAGC 1 cut(s) 1195
AvaII GGWCC 2 cut(s) 151, 485
AvrII CCTAGG 1 cut(s) 346
BaeGI GKGCMC 1 cut(s) 346
Bbv12I GWGCWC 2 cut(s) 208, 438
BbvI GCAGC 3 cut(s) 343, 781, 784
BccI CCATC 7 cut(s) 32, 73, 224, 424, 447, 854, 1249
BceAI ACGGC 6 cut(s) 27, 172, 749, 978, 1108, 1234
BcgI CGANNNNNNTGC 6 cut(s) 110, 144, 365, 399, 1047, 1081
BciT130I CCWGG 3 cut(s) 28, 116, 782
BcnI CCSGG 2 cut(s) 179, 498
BcoDI GTCTC 2 cut(s) 953, 1209
BfaI CTAG 5 cut(s) 347, 600, 1034, 1196, 1221
BfmI CTRYAG 1 cut(s) 798
BfuAI ACCTGC 1 cut(s) 802
BglII AGATCT 1 cut(s) 504
BisI GCNGC 6 cut(s) 332, 795, 798, 838, 1045, 1247
BlnI CCTAGG 1 cut(s) 346
BlsI GCNGC 6 cut(s) 333, 796, 799, 839, 1046, 1248
Bme1390I CCNGG 5 cut(s) 28, 116, 179, 498, 782
Bme18I GGWCC 2 cut(s) 151, 485
BmgBI CACGTC 1 cut(s) 581
BmgT120I GGNCC 4 cut(s) 151, 292, 485, 778
BmiI GGNNCC 4 cut(s) 153, 222, 293, 519
BmrFI CCNGG 5 cut(s) 28, 116, 179, 498, 782
BmrI ACTGGG 1 cut(s) 707
BmsI GCATC 3 cut(s) 237, 373, 751
BmtI GCTAGC 1 cut(s) 1199
BmuI ACTGGG 1 cut(s) 707
BpmI CTGGAG 1 cut(s) 803
BpuEI CTTGAG 2 cut(s) 717, 1218
BpuMI CCSGG 2 cut(s) 179, 498
BsaJI CCNNGG 9 cut(s) 114, 178, 188, 346, 765, 780, 881, 983, 1117
BsaWI WCCGGW 2 cut(s) 655, 1211
Bsc4I CCNNNNNNNGG 9 cut(s) 49, 71, 230, 301, 351, 482, 497, 718, 847
Bse118I RCCGGY 1 cut(s) 301
Bse1I ACTGG 3 cut(s) 209, 692, 713
BseAI TCCGGA 1 cut(s) 1211
BseBI CCWGG 3 cut(s) 28, 116, 782
BseDI CCNNGG 9 cut(s) 114, 178, 188, 346, 765, 780, 881, 983, 1117
BseGI GGATG 2 cut(s) 766, 922
BseLI CCNNNNNNNGG 9 cut(s) 49, 71, 230, 301, 351, 482, 497, 718, 847
BseMII CTCAG 2 cut(s) 73, 1002
BseNI ACTGG 3 cut(s) 209, 692, 713
BsePI GCGCGC 1 cut(s) 183
BseRI GAGGAG 2 cut(s) 800, 1088
BseSI GKGCMC 1 cut(s) 346
BseXI GCAGC 3 cut(s) 343, 781, 784
BseYI CCCAGC 1 cut(s) 49
Bsh1236I CGCG 1 cut(s) 185
BshFI GGCC 5 cut(s) 42, 64, 294, 779, 1178
BsiHKAI GWGCWC 2 cut(s) 208, 438
BsiSI CCGG 7 cut(s) 178, 302, 497, 656, 841, 1054, 1212
BslFI GGGAC 2 cut(s) 695, 817
BslI CCNNNNNNNGG 9 cut(s) 49, 71, 230, 301, 351, 482, 497, 718, 847
BsmAI GTCTC 2 cut(s) 953, 1209
BsmBI CGTCTC 2 cut(s) 953, 1209
BsmFI GGGAC 2 cut(s) 695, 817
BsmI GAATGC 2 cut(s) 171, 622
BsnI GGCC 5 cut(s) 42, 64, 294, 779, 1178
Bsp1286I GDGCHC 3 cut(s) 208, 346, 438
Bsp13I TCCGGA 1 cut(s) 1211
Bsp143I GATC 8 cut(s) 55, 127, 199, 241, 279, 316, 393, 504
Bsp19I CCATGG 1 cut(s) 1117
BspACI CCGC 9 cut(s) 31, 169, 719, 838, 1044, 1047, 1068, 1095, 1247
BspANI GGCC 5 cut(s) 42, 64, 294, 779, 1178
BspCNI CTCAG 2 cut(s) 72, 1003
BspEI TCCGGA 1 cut(s) 1211
BspFNI CGCG 1 cut(s) 185
BspLI GGNNCC 4 cut(s) 153, 222, 293, 519
BspMAI CTGCAG 1 cut(s) 802
BspMI ACCTGC 1 cut(s) 802
BspOI GCTAGC 1 cut(s) 1199
BspPI GGATC 4 cut(s) 63, 249, 287, 401
BsrFI RCCGGY 1 cut(s) 301
BsrI ACTGG 3 cut(s) 209, 692, 713
BssAI RCCGGY 1 cut(s) 301
BssECI CCNNGG 9 cut(s) 114, 178, 188, 346, 765, 780, 881, 983, 1117
BssHII GCGCGC 1 cut(s) 183
BssMI GATC 8 cut(s) 55, 127, 199, 241, 279, 316, 393, 504
BssNAI GTATAC 1 cut(s) 108
BssT1I CCWWGG 3 cut(s) 346, 983, 1117
Bst1107I GTATAC 1 cut(s) 108
Bst2UI CCWGG 3 cut(s) 28, 116, 782
Bst4CI ACNGT 2 cut(s) 84, 528
Bst6I CTCTTC 1 cut(s) 143
BstAPI GCANNNNNTGC 1 cut(s) 545
BstC8I GCNNGC 5 cut(s) 185, 473, 606, 1180, 1197
BstDEI CTNAG 3 cut(s) 59, 1005, 1011
BstDSI CCRYGG 3 cut(s) 188, 765, 1117
BstF5I GGATG 2 cut(s) 766, 922
BstFNI CGCG 1 cut(s) 185
BstHHI GCGC 4 cut(s) 121, 185, 187, 1232
BstKTI GATC 8 cut(s) 58, 130, 202, 244, 282, 319, 396, 507
BstMAI GTCTC 2 cut(s) 953, 1209
BstMBI GATC 8 cut(s) 55, 127, 199, 241, 279, 316, 393, 504
BstMWI GCNNNNNNNGC 5 cut(s) 545, 605, 626, 647, 743
BstNI CCWGG 3 cut(s) 28, 116, 782
BstNSI RCATGY 1 cut(s) 254
BstSCI CCNGG 5 cut(s) 26, 114, 177, 496, 780
BstSFI CTRYAG 1 cut(s) 798
BstSLI GKGCMC 1 cut(s) 346
BstUI CGCG 1 cut(s) 185
BstV1I GCAGC 3 cut(s) 343, 781, 784
BstX2I RGATCY 4 cut(s) 55, 241, 393, 504
BstXI CCANNNNNNTGG 1 cut(s) 1124
BstYI RGATCY 4 cut(s) 55, 241, 393, 504
BstZ17I GTATAC 1 cut(s) 108
BsuRI GGCC 5 cut(s) 42, 64, 294, 779, 1178
BtgI CCRYGG 3 cut(s) 188, 765, 1117
BtgZI GCGATG 1 cut(s) 1227
BtrI CACGTC 1 cut(s) 581
BtsCI GGATG 2 cut(s) 766, 922
BtsI GCAGTG 1 cut(s) 831
BtsIMutI CAGTG 2 cut(s) 216, 831
BveI ACCTGC 1 cut(s) 802
Cac8I GCNNGC 5 cut(s) 185, 473, 606, 1180, 1197
CaiI CAGNNNCTG 1 cut(s) 817
CfoI GCGC 4 cut(s) 121, 185, 187, 1232
Cfr10I RCCGGY 1 cut(s) 301
Cfr13I GGNCC 4 cut(s) 151, 292, 485, 778
CseI GACGC 1 cut(s) 1226
Csp6I GTAC 2 cut(s) 254, 686
CviAII CATG 6 cut(s) 87, 251, 464, 775, 913, 1118
CviQI GTAC 2 cut(s) 254, 686
DdeI CTNAG 3 cut(s) 59, 1005, 1011
DpnI GATC 8 cut(s) 57, 129, 201, 243, 281, 318, 395, 506
DpnII GATC 8 cut(s) 55, 127, 199, 241, 279, 316, 393, 504
DraI TTTAAA 1 cut(s) 555
EaeI YGGCCR 1 cut(s) 40
Eam1104I CTCTTC 1 cut(s) 143
EarI CTCTTC 1 cut(s) 143
EciI GGCGGA 1 cut(s) 1110
Eco130I CCWWGG 3 cut(s) 346, 983, 1117
Eco47I GGWCC 2 cut(s) 151, 485
Eco57I CTGAAG 1 cut(s) 839
EcoO109I RGGNCCY 1 cut(s) 292
EcoRII CCWGG 3 cut(s) 26, 114, 780
EcoT14I CCWWGG 3 cut(s) 346, 983, 1117
EcoT22I ATGCAT 1 cut(s) 252
ErhI CCWWGG 3 cut(s) 346, 983, 1117
Esp3I CGTCTC 2 cut(s) 953, 1209
FaeI CATG 6 cut(s) 90, 254, 467, 778, 916, 1121
FaqI GGGAC 2 cut(s) 695, 817
FatI CATG 6 cut(s) 86, 250, 463, 774, 912, 1117
FblI GTMKAC 1 cut(s) 107
Fnu4HI GCNGC 6 cut(s) 332, 795, 798, 838, 1045, 1247
FokI GGATG 2 cut(s) 773, 929
Fsp4HI GCNGC 6 cut(s) 332, 795, 798, 838, 1045, 1247
FspBI CTAG 5 cut(s) 347, 600, 1034, 1196, 1221
GlaI GCGC 4 cut(s) 120, 184, 186, 1231
GluI GCNGC 6 cut(s) 332, 795, 798, 838, 1045, 1247
GsaI CCCAGC 1 cut(s) 53
GsuI CTGGAG 1 cut(s) 803
HaeIII GGCC 5 cut(s) 42, 64, 294, 779, 1178
HapII CCGG 7 cut(s) 178, 302, 497, 656, 841, 1054, 1212
HgaI GACGC 1 cut(s) 1226
HhaI GCGC 4 cut(s) 121, 185, 187, 1232
Hin1II CATG 6 cut(s) 90, 254, 467, 778, 916, 1121
Hin6I GCGC 4 cut(s) 119, 183, 185, 1230
HinP1I GCGC 4 cut(s) 119, 183, 185, 1230
HincII GTYRAC 1 cut(s) 415
HindII GTYRAC 1 cut(s) 415
HindIII AAGCTT 1 cut(s) 1293
HinfI GANTC 5 cut(s) 234, 460, 788, 923, 990
HpaII CCGG 7 cut(s) 178, 302, 497, 656, 841, 1054, 1212
HphI GGTGA 4 cut(s) 298, 656, 1082, 1331
Hpy166II GTNNAC 3 cut(s) 9, 108, 415
Hpy188III TCNNGA 3 cut(s) 397, 994, 1212
Hpy8I GTNNAC 3 cut(s) 9, 108, 415
Hpy99I CGWCG 1 cut(s) 582
HpyAV CCTTC 3 cut(s) 64, 305, 814
HpyCH4III ACNGT 2 cut(s) 84, 528
HpyCH4IV ACGT 1 cut(s) 580
HpyCH4V TGCA 5 cut(s) 250, 548, 562, 608, 800
HpyF10VI GCNNNNNNNGC 5 cut(s) 545, 605, 626, 647, 743
HpyF3I CTNAG 3 cut(s) 59, 1005, 1011
HpySE526I ACGT 1 cut(s) 580
Hsp92II CATG 6 cut(s) 90, 254, 467, 778, 916, 1121
HspAI GCGC 4 cut(s) 119, 183, 185, 1230
Kpn2I TCCGGA 1 cut(s) 1211
Kzo9I GATC 8 cut(s) 55, 127, 199, 241, 279, 316, 393, 504
LmnI GCTCC 2 cut(s) 226, 441
Lsp1109I GCAGC 3 cut(s) 343, 781, 784
LweI GCATC 3 cut(s) 237, 373, 751
MaeI CTAG 5 cut(s) 347, 600, 1034, 1196, 1221
MaeII ACGT 1 cut(s) 580
MalI GATC 8 cut(s) 57, 129, 201, 243, 281, 318, 395, 506
MboI GATC 8 cut(s) 55, 127, 199, 241, 279, 316, 393, 504
MboII GAAGA 6 cut(s) 130, 255, 625, 915, 1096, 1200
MfeI CAATTG 1 cut(s) 738
MflI RGATCY 4 cut(s) 55, 241, 393, 504
MhlI GDGCHC 3 cut(s) 208, 346, 438
MluCI AATT 6 cut(s) 585, 738, 1130, 1225, 1304, 1324
MlyI GAGTC 4 cut(s) 454, 797, 932, 999
MmeI TCCRAC 5 cut(s) 371, 463, 738, 936, 1004
Mph1103I ATGCAT 1 cut(s) 252
MroI TCCGGA 1 cut(s) 1211
MseI TTAA 2 cut(s) 554, 1298
MspI CCGG 7 cut(s) 178, 302, 497, 656, 841, 1054, 1212
MspR9I CCNGG 5 cut(s) 28, 116, 179, 498, 782
MunI CAATTG 1 cut(s) 738
Mva1269I GAATGC 2 cut(s) 171, 622
MvaI CCWGG 3 cut(s) 28, 116, 782
MvnI CGCG 1 cut(s) 185
MwoI GCNNNNNNNGC 5 cut(s) 545, 605, 626, 647, 743
NciI CCSGG 2 cut(s) 179, 498
NcoI CCATGG 1 cut(s) 1117
NdeII GATC 8 cut(s) 55, 127, 199, 241, 279, 316, 393, 504
NheI GCTAGC 1 cut(s) 1195
NlaIII CATG 6 cut(s) 90, 254, 467, 778, 916, 1121
NlaIV GGNNCC 4 cut(s) 153, 222, 293, 519
NsiI ATGCAT 1 cut(s) 252
NspI RCATGY 1 cut(s) 254
PalAI GGCGCGCC 1 cut(s) 183
PauI GCGCGC 1 cut(s) 183
PctI GAATGC 2 cut(s) 171, 622
PfeI GAWTC 1 cut(s) 234
PflFI GACNNNGTC 1 cut(s) 707
PkrI GCNGC 6 cut(s) 333, 796, 799, 839, 1046, 1248
PleI GAGTC 4 cut(s) 454, 796, 931, 998
PpsI GAGTC 4 cut(s) 454, 796, 931, 998
PsiI TTATAA 1 cut(s) 1140
Psp6I CCWGG 3 cut(s) 26, 114, 780
PspFI CCCAGC 1 cut(s) 49
PspGI CCWGG 3 cut(s) 26, 114, 780
PspN4I GGNNCC 4 cut(s) 153, 222, 293, 519
PspPI GGNCC 4 cut(s) 151, 292, 485, 778
PstI CTGCAG 1 cut(s) 802
PstNI CAGNNNCTG 1 cut(s) 817
PsuI RGATCY 4 cut(s) 55, 241, 393, 504
PsyI GACNNNGTC 1 cut(s) 707
PteI GCGCGC 1 cut(s) 183
RsaI GTAC 2 cut(s) 255, 687
RsaNI GTAC 2 cut(s) 254, 686
SaqAI TTAA 2 cut(s) 554, 1298
SatI GCNGC 6 cut(s) 332, 795, 798, 838, 1045, 1247
Sau3AI GATC 8 cut(s) 55, 127, 199, 241, 279, 316, 393, 504
Sau96I GGNCC 4 cut(s) 151, 292, 485, 778
SchI GAGTC 4 cut(s) 454, 797, 932, 999
ScrFI CCNGG 5 cut(s) 28, 116, 179, 498, 782
SduI GDGCHC 3 cut(s) 208, 346, 438
SfaNI GCATC 3 cut(s) 237, 373, 751
SfcI CTRYAG 1 cut(s) 798
SgsI GGCGCGCC 1 cut(s) 183
SinI GGWCC 2 cut(s) 151, 485
SmlI CTYRAG 2 cut(s) 732, 1233
SmoI CTYRAG 2 cut(s) 732, 1233
Sse9I AATT 6 cut(s) 585, 738, 1130, 1225, 1304, 1324
SsiI CCGC 9 cut(s) 31, 169, 719, 838, 1044, 1047, 1068, 1095, 1247
SspMI CTAG 5 cut(s) 347, 600, 1034, 1196, 1221
StyD4I CCNGG 5 cut(s) 26, 114, 177, 496, 780
StyI CCWWGG 3 cut(s) 346, 983, 1117
TaaI ACNGT 2 cut(s) 84, 528
TaiI ACGT 1 cut(s) 583
TaqI TCGA 5 cut(s) 68, 202, 381, 530, 852
TasI AATT 6 cut(s) 585, 738, 1130, 1225, 1304, 1324
TatI WGTACW 1 cut(s) 685
TauI GCSGC 3 cut(s) 840, 1047, 1249
TfiI GAWTC 1 cut(s) 234
Tru1I TTAA 2 cut(s) 554, 1298
Tru9I TTAA 2 cut(s) 554, 1298
TscAI CASTG 2 cut(s) 216, 831
TseI GCWGC 3 cut(s) 331, 794, 797
TspDTI ATGAA 1 cut(s) 1155
TspGWI ACGGA 2 cut(s) 138, 164
TspRI CASTG 2 cut(s) 216, 831
Tth111I GACNNNGTC 1 cut(s) 707
VpaK11BI GGWCC 2 cut(s) 151, 485
XapI RAATTY 1 cut(s) 585
XceI RCATGY 1 cut(s) 254
XcmI CCANNNNNNNNNTGG 1 cut(s) 446
XmaJI CCTAGG 1 cut(s) 346
XmiI GTMKAC 1 cut(s) 107
XspI CTAG 5 cut(s) 347, 600, 1034, 1196, 1221
Zsp2I ATGCAT 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.