Rmu_sc0002286.1_g000012

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002286.1
OG0000336
Physical Location & Seq
Forward (+)
68886 .. 70253
1368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002286.1_g000012.1.cds

Sequence Viewer

Length: 1263 bp
atggaggaggtggatgagatggctgtccgactggctgcctctcttagactggcagatgtgcgtagaccggtggatctgaggccagctcgtggcgaaggtttgcggcgttcgcagacgtatctggtggggaagctgctgacggctagggcttttaacaaaagatcgttcatgggcatgttccgtcgtgcatggagattgaatggacggtacactgctcaggaacatggagaccgatttctgttcaccttgacggatccaactgaccgcaaccggattcttcgcggtggtccttggggttttgacagagctccggttgtcctggcaccttatgatggagtgggagcgattaaggatgtcccgctctccaccatagccttctggatcaaggtacgtgggctgccaccggactttcataccgatcggtgcttgaggagaattggcagtgctttggggcggtttctgcagaaagatataacagagtttggagagggaaggattcggatccgggttgagatggatcttctgcagcctgtgatttttagtcattgcttcacggtggatgatgggattgatgtagatctcgatttcttcttcgaaaatctctatggaagatgtcaagattgtggtttgcttactcatgtgggtttaccatgtgctgggccgcccttgccggcggaggtcaggagtgaaccgtcgccggtacggcgaaatcttgacagggggttaagccgtgtggatgtgtctcctcatgtgcgaccaatggtgttcggagcacagctgagtccacaggctcctgtgcctgagctggtggagactggtagtgacccagcttcggatggtccacggcaggagccgattggcagtggtagttctgtggagaaggagatgctggaggccgctccgagttgtggtatgcgtcggatacgtgtggatgaagagggtagctctcccaaaaagctacgcctaagtctagcagtaggccggaccaatttggatgctatgacaatgggattgtgtcctgtgaaacctatgaaggaagtatacaaaaaaaggccgggaaggccaaagggagcaaagaataaggcaagggagcttaaggtcgtgcatgcttcccctatgaaaaagtcaccggcaaaaaaggtcaagactcctaggaaagcggagcaattggtgaatggtttaccggaattcaccgtggtggaagcagttcatggttccgacccatcaaagggtaaggagccaatagttggtttgataggttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

420

Amino Acids

46.5

Weight (kDa)

9.72

Isoelectric Point (pI)

47.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000336)

Species Orthologous Gene IDs
malus_domestica MD05G1024100.v1.1
rosa_chinensis RchiOBHm_Chr2g0152291 RchiOBHm_Chr4g0387411
rosa_laevigata RLG00000009698 RLG00000009699 RLG00000009700 RLG00000023615 RLG00000024265 RLG00000034445 RLG00000036567
rosa_multiflora Rmu_co8268067.1_g000001 Rmu_co8313555.1_g000001 Rmu_co8324697.1_g000001 Rmu_sc0000318.1_g000023 Rmu_sc0000342.1_g000016 Rmu_sc0000447.1_g000010 Rmu_sc0000528.1_g000009 Rmu_sc0000539.1_g000060 Rmu_sc0000929.1_g000023 Rmu_sc0001493.1_g000081 Rmu_sc0001674.1_g000003 Rmu_sc0001791.1_g000023 Rmu_sc0001822.1_g000005 Rmu_sc0001822.1_g000033 Rmu_sc0002061.1_g000010 Rmu_sc0002286.1_g000012 Rmu_sc0002979.1_g000009 Rmu_sc0003158.1_g000016 Rmu_sc0003221.1_g000001 Rmu_sc0003641.1_g000029 Rmu_sc0003742.1_g000012 Rmu_sc0003814.1_g000004 Rmu_sc0003823.1_g000005 Rmu_sc0004002.1_g000005 Rmu_sc0004564.1_g000005 Rmu_sc0005415.1_g000003 Rmu_sc0006050.1_g000025 Rmu_sc0006555.1_g000002 Rmu_sc0009954.1_g000020 Rmu_sc0010421.1_g000007 Rmu_sc0010607.1_g000002 Rmu_sc0011044.1_g000005 Rmu_sc0011497.1_g000015 Rmu_sc0014532.1_g000004 Rmu_sc0014745.1_g000005 Rmu_sc0014821.1_g000001 Rmu_sc0015038.1_g000002 Rmu_sc0015454.1_g000004 Rmu_sc0019663.1_g000002 Rmu_sc0027475.1_g000003 Rmu_sc0028826.1_g000002 Rmu_ssc0000117.1_g000019 Rmu_ssc0000175.1_g000034
rosa_roxburghii Rroxscaffold_3G00237080 Rroxscaffold_4G00288290 Rroxscaffold_6G00397510
rosa_rugosa Rorug01G0035000 Rorug01G0190900 Rorug01G0208500 Rorug01G0208600 Rorug01G0208600 Rorug01G0344900 Rorug01G0479500 Rorug01G0479600 Rorug02G0230400 Rorug02G0320900 Rorug02G0433300 Rorug03G0147400 Rorug03G0169700.1 Rorug03G0169800 Rorug03G0198300 Rorug04G0022900 Rorug04G0064600 Rorug04G0322100 Rorug04G0388900 Rorug05G0153200 Rorug05G0231600 Rorug05G0231700 Rorug05G0231800 Rorug05G0276200 Rorug05G0292400 Rorug05G0314700 Rorug06G0092000 Rorug06G0260900 Rorug06G0273600 RorugPtG0003200
rosa_samantha Rh1AG264100 Rh1AG292500 Rh1AG423800 Rh2AG098000 Rh2AG232700 Rh2AG361100 Rh2AG372900 Rh2BG099200 Rh2BG246000 Rh2BG260600 Rh2BG378400 Rh3BG142300 Rh3BG252900 Rh3BG267700 Rh3DG302400 Rh5BG059800 Rh5BG320000 Rh5BG530500 Rh6AG089300 Rh6AG089400 Rh6AG127400 Rh6AG376700 Rh7CG488700 Rh7DG265900
rosa_wichuraiana Rw2G040640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 322
AccB7I CCANNNNNTGG 3 cut(s) 89, 656, 1247
AccBSI CCGCTC 2 cut(s) 361, 899
AccI GTMKAC 2 cut(s) 64, 1041
AccII CGCG 1 cut(s) 282
AciI CCGC 9 cut(s) 103, 265, 282, 359, 454, 662, 674, 897, 1160
AclWI GGATC 7 cut(s) 81, 248, 261, 389, 496, 509, 525
AcsI RAATTY 1 cut(s) 1187
AfaI GTAC 3 cut(s) 209, 390, 702
AfiI CCNNNNNNNGG 8 cut(s) 89, 332, 656, 832, 908, 1228, 1229, 1247
AflII CTTAAG 1 cut(s) 1094
AflIII ACRYGT 1 cut(s) 925
AgeI ACCGGT 1 cut(s) 67
AgsI TTSAA 1 cut(s) 199
AjnI CCWGG 1 cut(s) 318
AleI CACNNNNGTG 1 cut(s) 1196
AluBI AGCT 9 cut(s) 86, 133, 308, 778, 805, 830, 945, 958, 1093
AluI AGCT 9 cut(s) 86, 133, 308, 778, 805, 830, 945, 958, 1093
Alw21I GWGCWC 2 cut(s) 310, 775
Alw26I GTCTC 3 cut(s) 222, 747, 806
AlwI GGATC 7 cut(s) 81, 248, 261, 389, 496, 509, 525
AoxI GGCC 6 cut(s) 80, 659, 894, 979, 1052, 1061
ApeKI GCWGC 4 cut(s) 35, 133, 397, 526
ApoI RAATTY 1 cut(s) 1187
AsiGI ACCGGT 1 cut(s) 67
Asp700I GAANNNNTTC 1 cut(s) 1206
AspA2I CCTAGG 1 cut(s) 1151
AspS9I GGNCC 4 cut(s) 287, 659, 839, 984
AsuC2I CCSGG 2 cut(s) 506, 1056
AsuHPI GGTGA 4 cut(s) 235, 1119, 1183, 1183
AsuII TTCGAA 1 cut(s) 594
AvaII GGWCC 3 cut(s) 287, 839, 984
AvrII CCTAGG 1 cut(s) 1151
BamHI GGATCC 2 cut(s) 253, 501
BanI GGYRCC 1 cut(s) 322
BanII GRGCYC 1 cut(s) 310
BarI GAAGNNNNNNTAC 2 cut(s) 1025, 1057
BauI CACGAG 1 cut(s) 87
Bbv12I GWGCWC 2 cut(s) 310, 775
BbvI GCAGC 4 cut(s) 22, 120, 384, 538
BccI CCATC 6 cut(s) 13, 326, 508, 557, 830, 1231
BceAI ACGGC 4 cut(s) 156, 714, 719, 860
BciT130I CCWGG 1 cut(s) 320
BciVI GTATCC 1 cut(s) 915
BcnI CCSGG 2 cut(s) 506, 1056
BcoDI GTCTC 3 cut(s) 222, 747, 806
BfaI CTAG 3 cut(s) 144, 971, 1152
BfmI CTRYAG 2 cut(s) 461, 524
BfrI CTTAAG 1 cut(s) 1094
BfuI GTATCC 1 cut(s) 915
BglI GCCNNNNNGGC 2 cut(s) 703, 1060
BglII AGATCT 1 cut(s) 577
BisI GCNGC 7 cut(s) 36, 104, 134, 398, 527, 662, 897
BlnI CCTAGG 1 cut(s) 1151
BlsI GCNGC 7 cut(s) 37, 105, 135, 399, 528, 663, 898
Bme1390I CCNGG 3 cut(s) 320, 506, 1056
Bme18I GGWCC 3 cut(s) 287, 839, 984
BmgT120I GGNCC 4 cut(s) 287, 659, 839, 984
BmiI GGNNCC 7 cut(s) 255, 324, 503, 792, 852, 1216, 1239
BmrFI CCNGG 3 cut(s) 320, 506, 1056
BmsI GCATC 2 cut(s) 876, 985
BplI GAGNNNNNCTC 4 cut(s) 70, 102, 929, 961
BpmI CTGGAG 1 cut(s) 911
Bpu10I CCTNAGC 2 cut(s) 216, 801
Bpu14I TTCGAA 1 cut(s) 594
BpuEI CTTGAG 1 cut(s) 448
BpuMI CCSGG 2 cut(s) 506, 1056
BsaAI YACGTR 2 cut(s) 392, 926
BsaBI GATNNNNATC 2 cut(s) 500, 576
BsaI GGTCTC 1 cut(s) 222
BsaJI CCNNGG 4 cut(s) 290, 842, 1151, 1194
BsaWI WCCGGW 5 cut(s) 67, 270, 310, 403, 1183
Bsc4I CCNNNNNNNGG 8 cut(s) 89, 332, 656, 832, 908, 1228, 1229, 1247
Bse118I RCCGGY 4 cut(s) 67, 670, 697, 1129
Bse1I ACTGG 3 cut(s) 36, 54, 820
Bse3DI GCAATG 1 cut(s) 544
Bse8I GATNNNNATC 2 cut(s) 500, 576
BseBI CCWGG 1 cut(s) 320
BseDI CCNNGG 4 cut(s) 290, 842, 1151, 1194
BseGI GGATG 7 cut(s) 19, 358, 565, 742, 841, 937, 1000
BseJI GATNNNNATC 2 cut(s) 500, 576
BseLI CCNNNNNNNGG 8 cut(s) 89, 332, 656, 832, 908, 1228, 1229, 1247
BseMI GCAATG 1 cut(s) 544
BseMII CTCAG 4 cut(s) 68, 230, 770, 792
BseNI ACTGG 3 cut(s) 36, 54, 820
BseRI GAGGAG 3 cut(s) 20, 445, 735
BseXI GCAGC 4 cut(s) 22, 120, 384, 538
BseYI CCCAGC 2 cut(s) 656, 826
Bsh1236I CGCG 1 cut(s) 282
Bsh1285I CGRYCG 1 cut(s) 421
BshFI GGCC 6 cut(s) 82, 661, 896, 981, 1054, 1063
BshNI GGYRCC 1 cut(s) 322
BshTI ACCGGT 1 cut(s) 67
BsiEI CGRYCG 1 cut(s) 421
BsiHKAI GWGCWC 2 cut(s) 310, 775
BslFI GGGAC 1 cut(s) 341
BslI CCNNNNNNNGG 8 cut(s) 89, 332, 656, 832, 908, 1228, 1229, 1247
BsmAI GTCTC 3 cut(s) 222, 747, 806
BsmFI GGGAC 1 cut(s) 341
BsnI GGCC 6 cut(s) 82, 661, 896, 981, 1054, 1063
Bso31I GGTCTC 1 cut(s) 222
Bsp119I TTCGAA 1 cut(s) 594
Bsp1286I GDGCHC 2 cut(s) 310, 775
Bsp143I GATC 8 cut(s) 73, 161, 253, 381, 418, 501, 517, 577
BspACI CCGC 9 cut(s) 103, 265, 282, 359, 454, 662, 674, 897, 1160
BspANI GGCC 6 cut(s) 82, 661, 896, 981, 1054, 1063
BspCNI CTCAG 4 cut(s) 69, 229, 771, 793
BspFNI CGCG 1 cut(s) 282
BspLI GGNNCC 7 cut(s) 255, 324, 503, 792, 852, 1216, 1239
BspMAI CTGCAG 2 cut(s) 465, 528
BspPI GGATC 7 cut(s) 81, 248, 261, 389, 496, 509, 525
BspT104I TTCGAA 1 cut(s) 594
BspT107I GGYRCC 1 cut(s) 322
BspTI CTTAAG 1 cut(s) 1094
BspTNI GGTCTC 1 cut(s) 222
BsrBI CCGCTC 2 cut(s) 361, 899
BsrDI GCAATG 1 cut(s) 544
BsrFI RCCGGY 4 cut(s) 67, 670, 697, 1129
BsrI ACTGG 3 cut(s) 36, 54, 820
BssAI RCCGGY 4 cut(s) 67, 670, 697, 1129
BssECI CCNNGG 4 cut(s) 290, 842, 1151, 1194
BssMI GATC 8 cut(s) 73, 161, 253, 381, 418, 501, 517, 577
BssNAI GTATAC 1 cut(s) 1042
BssSI CACGAG 1 cut(s) 87
BssT1I CCWWGG 2 cut(s) 290, 1151
Bst1107I GTATAC 1 cut(s) 1042
Bst2BI CACGAG 1 cut(s) 87
Bst2UI CCWGG 1 cut(s) 320
Bst4CI ACNGT 4 cut(s) 207, 556, 693, 1195
Bst6I CTCTTC 1 cut(s) 930
BstAFI CTTAAG 1 cut(s) 1094
BstBAI YACGTR 2 cut(s) 392, 926
BstBI TTCGAA 1 cut(s) 594
BstC8I GCNNGC 3 cut(s) 84, 672, 1107
BstDEI CTNAG 6 cut(s) 44, 77, 216, 779, 801, 965
BstDSI CCRYGG 2 cut(s) 842, 1194
BstF5I GGATG 7 cut(s) 19, 358, 565, 742, 841, 937, 1000
BstFNI CGCG 1 cut(s) 282
BstKTI GATC 8 cut(s) 76, 164, 256, 384, 421, 504, 520, 580
BstMAI GTCTC 3 cut(s) 222, 747, 806
BstMBI GATC 8 cut(s) 73, 161, 253, 381, 418, 501, 517, 577
BstMCI CGRYCG 1 cut(s) 421
BstMWI GCNNNNNNNGC 5 cut(s) 109, 460, 667, 703, 1060
BstNI CCWGG 1 cut(s) 320
BstNSI RCATGY 2 cut(s) 178, 1109
BstSCI CCNGG 3 cut(s) 318, 504, 1054
BstSFI CTRYAG 2 cut(s) 461, 524
BstUI CGCG 1 cut(s) 282
BstV1I GCAGC 4 cut(s) 22, 120, 384, 538
BstX2I RGATCY 5 cut(s) 73, 253, 501, 517, 577
BstYI RGATCY 5 cut(s) 73, 253, 501, 517, 577
BstZ17I GTATAC 1 cut(s) 1042
BsuI GTATCC 1 cut(s) 915
BsuRI GGCC 6 cut(s) 82, 661, 896, 981, 1054, 1063
BtgI CCRYGG 2 cut(s) 842, 1194
BtsCI GGATG 7 cut(s) 19, 358, 565, 742, 841, 937, 1000
BtsI GCAGTG 3 cut(s) 210, 448, 868
BtsIMutI CAGTG 3 cut(s) 210, 448, 868
Cac8I GCNNGC 3 cut(s) 84, 672, 1107
Cfr10I RCCGGY 4 cut(s) 67, 670, 697, 1129
Cfr13I GGNCC 4 cut(s) 287, 659, 839, 984
CseI GACGC 1 cut(s) 905
Csp6I GTAC 3 cut(s) 208, 389, 701
CspAI ACCGGT 1 cut(s) 67
CspCI CAANNNNNGTGG 2 cut(s) 373, 408
CviAII CATG 9 cut(s) 169, 175, 189, 224, 638, 651, 749, 1106, 1211
CviQI GTAC 3 cut(s) 208, 389, 701
DdeI CTNAG 6 cut(s) 44, 77, 216, 779, 801, 965
DpnI GATC 8 cut(s) 75, 163, 255, 383, 420, 503, 519, 579
DpnII GATC 8 cut(s) 73, 161, 253, 381, 418, 501, 517, 577
Eam1104I CTCTTC 1 cut(s) 930
EarI CTCTTC 1 cut(s) 930
EciI GGCGGA 1 cut(s) 689
Ecl136II GAGCTC 1 cut(s) 308
Eco130I CCWWGG 2 cut(s) 290, 1151
Eco24I GRGCYC 1 cut(s) 310
Eco31I GGTCTC 1 cut(s) 222
Eco47I GGWCC 3 cut(s) 287, 839, 984
Eco53kI GAGCTC 1 cut(s) 308
EcoICRI GAGCTC 1 cut(s) 308
EcoRI GAATTC 1 cut(s) 1187
EcoRII CCWGG 1 cut(s) 318
EcoT14I CCWWGG 2 cut(s) 290, 1151
EcoT38I GRGCYC 1 cut(s) 310
ErhI CCWWGG 2 cut(s) 290, 1151
FaeI CATG 9 cut(s) 172, 178, 192, 227, 641, 654, 752, 1109, 1214
FaqI GGGAC 1 cut(s) 341
FatI CATG 9 cut(s) 168, 174, 188, 223, 637, 650, 748, 1105, 1210
FauI CCCGC 1 cut(s) 366
FblI GTMKAC 2 cut(s) 64, 1041
Fnu4HI GCNGC 7 cut(s) 36, 104, 134, 398, 527, 662, 897
FokI GGATG 7 cut(s) 26, 365, 572, 749, 848, 944, 1007
FriOI GRGCYC 1 cut(s) 310
Fsp4HI GCNGC 7 cut(s) 36, 104, 134, 398, 527, 662, 897
FspBI CTAG 3 cut(s) 144, 971, 1152
GluI GCNGC 7 cut(s) 36, 104, 134, 398, 527, 662, 897
GsaI CCCAGC 2 cut(s) 660, 830
GsuI CTGGAG 1 cut(s) 911
HaeIII GGCC 6 cut(s) 82, 661, 896, 981, 1054, 1063
HgaI GACGC 1 cut(s) 905
Hin1II CATG 9 cut(s) 172, 178, 192, 227, 641, 654, 752, 1109, 1214
HinfI GANTC 4 cut(s) 274, 496, 781, 1147
HphI GGTGA 4 cut(s) 235, 1119, 1183, 1183
Hpy166II GTNNAC 9 cut(s) 65, 210, 243, 647, 689, 785, 842, 1042, 1181
Hpy188I TCNGA 8 cut(s) 29, 78, 501, 770, 835, 903, 921, 1219
Hpy188III TCNNGA 7 cut(s) 218, 379, 581, 617, 682, 713, 1144
Hpy8I GTNNAC 9 cut(s) 65, 210, 243, 647, 689, 785, 842, 1042, 1181
Hpy99I CGWCG 3 cut(s) 186, 697, 921
HpyAV CCTTC 6 cut(s) 89, 385, 486, 874, 1027, 1053
HpyCH4III ACNGT 4 cut(s) 207, 556, 693, 1195
HpyCH4IV ACGT 3 cut(s) 116, 391, 925
HpyCH4V TGCA 4 cut(s) 188, 463, 526, 1105
HpyF10VI GCNNNNNNNGC 5 cut(s) 109, 460, 667, 703, 1060
HpyF3I CTNAG 6 cut(s) 44, 77, 216, 779, 801, 965
HpySE526I ACGT 3 cut(s) 116, 391, 925
Hsp92II CATG 9 cut(s) 172, 178, 192, 227, 641, 654, 752, 1109, 1214
KroI GCCGGC 1 cut(s) 670
KroNI GCCGGC 1 cut(s) 672
Kzo9I GATC 8 cut(s) 73, 161, 253, 381, 418, 501, 517, 577
Lsp1109I GCAGC 4 cut(s) 22, 120, 384, 538
LweI GCATC 2 cut(s) 876, 985
MaeI CTAG 3 cut(s) 144, 971, 1152
MaeII ACGT 3 cut(s) 116, 391, 925
MaeIII GTNAC 2 cut(s) 821, 1125
MalI GATC 8 cut(s) 75, 163, 255, 383, 420, 503, 519, 579
MbiI CCGCTC 2 cut(s) 361, 899
MboI GATC 8 cut(s) 73, 161, 253, 381, 418, 501, 517, 577
MboII GAAGA 6 cut(s) 269, 512, 580, 583, 621, 947
MfeI CAATTG 1 cut(s) 1166
MflI RGATCY 5 cut(s) 73, 253, 501, 517, 577
MhlI GDGCHC 2 cut(s) 310, 775
MluCI AATT 4 cut(s) 435, 988, 1166, 1187
MlyI GAGTC 2 cut(s) 790, 1141
MmeI TCCRAC 4 cut(s) 52, 281, 899, 1242
MnlI CCTC 8 cut(s) 49, 72, 423, 481, 670, 756, 886, 931
MroNI GCCGGC 1 cut(s) 670
MroXI GAANNNNTTC 1 cut(s) 1206
MseI TTAA 4 cut(s) 153, 348, 725, 1095
MslI CAYNNNNRTG 2 cut(s) 173, 1196
MspA1I CMGCKG 1 cut(s) 778
MspCI CTTAAG 1 cut(s) 1094
MspR9I CCNGG 3 cut(s) 320, 506, 1056
MunI CAATTG 1 cut(s) 1166
MvaI CCWGG 1 cut(s) 320
MvnI CGCG 1 cut(s) 282
MwoI GCNNNNNNNGC 5 cut(s) 109, 460, 667, 703, 1060
NaeI GCCGGC 1 cut(s) 672
NciI CCSGG 2 cut(s) 506, 1056
NdeII GATC 8 cut(s) 73, 161, 253, 381, 418, 501, 517, 577
NgoMIV GCCGGC 1 cut(s) 670
NlaIII CATG 9 cut(s) 172, 178, 192, 227, 641, 654, 752, 1109, 1214
NlaIV GGNNCC 7 cut(s) 255, 324, 503, 792, 852, 1216, 1239
NmuCI GTSAC 2 cut(s) 821, 1125
NspI RCATGY 2 cut(s) 178, 1109
NspV TTCGAA 1 cut(s) 594
OliI CACNNNNGTG 1 cut(s) 1196
PaeI GCATGC 1 cut(s) 1109
PdiI GCCGGC 1 cut(s) 672
PdmI GAANNNNTTC 1 cut(s) 1206
PfeI GAWTC 2 cut(s) 274, 496
PflMI CCANNNNNTGG 3 cut(s) 89, 656, 1247
PinAI ACCGGT 1 cut(s) 67
PkrI GCNGC 7 cut(s) 37, 105, 135, 399, 528, 663, 898
Ple19I CGATCG 1 cut(s) 421
PleI GAGTC 2 cut(s) 789, 1141
PpsI GAGTC 2 cut(s) 789, 1141
Ppu21I YACGTR 2 cut(s) 392, 926
Psp124BI GAGCTC 1 cut(s) 310
Psp6I CCWGG 1 cut(s) 318
PspFI CCCAGC 2 cut(s) 656, 826
PspGI CCWGG 1 cut(s) 318
PspN4I GGNNCC 7 cut(s) 255, 324, 503, 792, 852, 1216, 1239
PspPI GGNCC 4 cut(s) 287, 659, 839, 984
PstI CTGCAG 2 cut(s) 465, 528
PsuI RGATCY 5 cut(s) 73, 253, 501, 517, 577
PvuI CGATCG 1 cut(s) 421
PvuII CAGCTG 1 cut(s) 778
RsaI GTAC 3 cut(s) 209, 390, 702
RsaNI GTAC 3 cut(s) 208, 389, 701
RseI CAYNNNNRTG 2 cut(s) 173, 1196
SacI GAGCTC 1 cut(s) 310
SaqAI TTAA 4 cut(s) 153, 348, 725, 1095
SatI GCNGC 7 cut(s) 36, 104, 134, 398, 527, 662, 897
Sau3AI GATC 8 cut(s) 73, 161, 253, 381, 418, 501, 517, 577
Sau96I GGNCC 4 cut(s) 287, 659, 839, 984
SchI GAGTC 2 cut(s) 790, 1141
ScrFI CCNGG 3 cut(s) 320, 506, 1056
SduI GDGCHC 2 cut(s) 310, 775
SfaNI GCATC 2 cut(s) 876, 985
SfcI CTRYAG 2 cut(s) 461, 524
SfiI GGCCNNNNNGGCC 1 cut(s) 1060
SfuI TTCGAA 1 cut(s) 594
SinI GGWCC 3 cut(s) 287, 839, 984
SmiMI CAYNNNNRTG 2 cut(s) 173, 1196
SmlI CTYRAG 2 cut(s) 427, 1094
SmoI CTYRAG 2 cut(s) 427, 1094
SphI GCATGC 1 cut(s) 1109
Sse9I AATT 4 cut(s) 435, 988, 1166, 1187
SsiI CCGC 9 cut(s) 103, 265, 282, 359, 454, 662, 674, 897, 1160
SspMI CTAG 3 cut(s) 144, 971, 1152
SstI GAGCTC 1 cut(s) 310
StyD4I CCNGG 3 cut(s) 318, 504, 1054
StyI CCWWGG 2 cut(s) 290, 1151
TaaI ACNGT 4 cut(s) 207, 556, 693, 1195
TaiI ACGT 3 cut(s) 119, 394, 928
TaqI TCGA 2 cut(s) 582, 594
TaqII GACCGA 1 cut(s) 246
TasI AATT 4 cut(s) 435, 988, 1166, 1187
TauI GCSGC 3 cut(s) 106, 664, 899
TfiI GAWTC 2 cut(s) 274, 496
Tru1I TTAA 4 cut(s) 153, 348, 725, 1095
Tru9I TTAA 4 cut(s) 153, 348, 725, 1095
TscAI CASTG 3 cut(s) 217, 448, 868
TseFI GTSAC 2 cut(s) 821, 1125
TseI GCWGC 4 cut(s) 35, 133, 397, 526
Tsp45I GTSAC 2 cut(s) 821, 1125
TspDTI ATGAA 6 cut(s) 157, 401, 948, 1046, 1133, 1199
TspGWI ACGGA 2 cut(s) 170, 266
TspRI CASTG 3 cut(s) 217, 448, 868
Van91I CCANNNNNTGG 3 cut(s) 89, 656, 1247
Vha464I CTTAAG 1 cut(s) 1094
VpaK11BI GGWCC 3 cut(s) 287, 839, 984
XapI RAATTY 1 cut(s) 1187
XceI RCATGY 2 cut(s) 178, 1109
XmaJI CCTAGG 1 cut(s) 1151
XmiI GTMKAC 2 cut(s) 64, 1041
XmnI GAANNNNTTC 1 cut(s) 1206
XspI CTAG 3 cut(s) 144, 971, 1152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.