Rorug01G0344900

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000336
Physical Location & Seq
Reverse (-)
46272805 .. 46275756
2952 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0344900.1

Sequence Viewer

Length: 1167 bp
ATGGATCAAGTGGAGGCACCAATTGTAGATGTCAGCCATGTTGGAGCTCTAGATTTTACTGGCAATGGTGTAGAAGCCGAGTCTTTCAAGCACCGTGTTGATGAAATTTTCGTTCAGGTTGACAAGCTTGAGCAGAGAGTGAATGAGATAGAGCAGTTTTACTCGAGCGCGAGTAAAAAGCAGGCGAATGCAAGTAAGAGTGGCTCAGCTGTGAAGGATAAAGAGAAGCATGTTCCGAGTATGAAGAAGCAGCAGCAAGAGGCTGCATTGAGGGAGGCAGCTGCCGCAAAGAGAATGCAAGAACTCATGCGCCAATTTGGCACCATATTGCGTCAAATTACACAACACAAGTGGGCATGGCCCTTTTTGCAACCTGTAGATGTAGAAGGTCTTGGTTTACATGATTATTATGAGGTCATTGACAAGCCAATGGATTTCAGTACAATTAAAAATCAAATGGAGGCCAAGGATGGTACTGGGTATAAAAACGTAAGGGAGATATGTGCTGATGTGCGGTTAGTTTTCAAAAATGCGATGAAGTATAATGAGGAGAGAAGTGATGTTCATGTTATGGCCAAAACTTTGATGGCAAAATTTGAGGAAAAGTGGCTGCAGCTTCTGCCTAAAGTTACTGAAGAGGAAAAGAGGCTAGAAGAGGAAGAGGCAGAAGCACAGTTAAATATGAAGCTTGCTGAAGAGGCTGCTCATGCTAAAATGGCTAGAGACTTAAGCAACGAGCTTTATGAGGTTGATATGCATTTGGAAGAGCTCCGAGATATGGTTGTTCAAAAGTGCAGGAAAATGTCAACTGAAGAGAAGAGAAAGCTTGGGATAGCCCTCAGCAGACTGTCCCCAGAGGATCTCAACACAGCACTAGAGATTGTTGCACAAAGTAATCCAGGTTTTCAAGCTACCGCGGAAGAGGTGGACCTTGATATCGACGCTCAGACTGAATCTACCCTGTGGAGGTTGAAGTTTTTTGTGAAGGACACTTTAGAAGTTCAGGCCAAGAGCTCAGCAAGCATAGGCGCCACCAACAATGACAACACTAACAAGCATAACAGCGGTAACAAAAATAACATCAACAACGCTAACAATAAGCGAAAAAGGGAGATTTGTAATGCTATTGCCAAAACCAATAAAAAGAATAAAAAACCAGCTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

388

Amino Acids

44.14

Weight (kDa)

6.08

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromodomain PF00439 108 - 193 1.1e-17 Bromodomain
BET PF17035 267 - 330 2.8e-18 Bromodomain extra-terminal - transcription regulation
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000336)

Species Orthologous Gene IDs
malus_domestica MD05G1024100.v1.1
rosa_chinensis RchiOBHm_Chr2g0152291 RchiOBHm_Chr4g0387411
rosa_laevigata RLG00000009698 RLG00000009699 RLG00000009700 RLG00000023615 RLG00000024265 RLG00000034445 RLG00000036567
rosa_multiflora Rmu_co8268067.1_g000001 Rmu_co8313555.1_g000001 Rmu_co8324697.1_g000001 Rmu_sc0000318.1_g000023 Rmu_sc0000342.1_g000016 Rmu_sc0000447.1_g000010 Rmu_sc0000528.1_g000009 Rmu_sc0000539.1_g000060 Rmu_sc0000929.1_g000023 Rmu_sc0001493.1_g000081 Rmu_sc0001674.1_g000003 Rmu_sc0001791.1_g000023 Rmu_sc0001822.1_g000005 Rmu_sc0001822.1_g000033 Rmu_sc0002061.1_g000010 Rmu_sc0002286.1_g000012 Rmu_sc0002979.1_g000009 Rmu_sc0003158.1_g000016 Rmu_sc0003221.1_g000001 Rmu_sc0003641.1_g000029 Rmu_sc0003742.1_g000012 Rmu_sc0003814.1_g000004 Rmu_sc0003823.1_g000005 Rmu_sc0004002.1_g000005 Rmu_sc0004564.1_g000005 Rmu_sc0005415.1_g000003 Rmu_sc0006050.1_g000025 Rmu_sc0006555.1_g000002 Rmu_sc0009954.1_g000020 Rmu_sc0010421.1_g000007 Rmu_sc0010607.1_g000002 Rmu_sc0011044.1_g000005 Rmu_sc0011497.1_g000015 Rmu_sc0014532.1_g000004 Rmu_sc0014745.1_g000005 Rmu_sc0014821.1_g000001 Rmu_sc0015038.1_g000002 Rmu_sc0015454.1_g000004 Rmu_sc0019663.1_g000002 Rmu_sc0027475.1_g000003 Rmu_sc0028826.1_g000002 Rmu_ssc0000117.1_g000019 Rmu_ssc0000175.1_g000034
rosa_roxburghii Rroxscaffold_3G00237080 Rroxscaffold_4G00288290 Rroxscaffold_6G00397510
rosa_rugosa Rorug01G0035000 Rorug01G0190900 Rorug01G0208500 Rorug01G0208600 Rorug01G0208600 Rorug01G0344900 Rorug01G0479500 Rorug01G0479600 Rorug02G0230400 Rorug02G0320900 Rorug02G0433300 Rorug03G0147400 Rorug03G0169700.1 Rorug03G0169800 Rorug03G0198300 Rorug04G0022900 Rorug04G0064600 Rorug04G0322100 Rorug04G0388900 Rorug05G0153200 Rorug05G0231600 Rorug05G0231700 Rorug05G0231800 Rorug05G0276200 Rorug05G0292400 Rorug05G0314700 Rorug06G0092000 Rorug06G0260900 Rorug06G0273600 RorugPtG0003200
rosa_samantha Rh1AG264100 Rh1AG292500 Rh1AG423800 Rh2AG098000 Rh2AG232700 Rh2AG361100 Rh2AG372900 Rh2BG099200 Rh2BG246000 Rh2BG260600 Rh2BG378400 Rh3BG142300 Rh3BG252900 Rh3BG267700 Rh3DG302400 Rh5BG059800 Rh5BG320000 Rh5BG530500 Rh6AG089300 Rh6AG089400 Rh6AG127400 Rh6AG376700 Rh7CG488700 Rh7DG265900
rosa_wichuraiana Rw2G040640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 16, 320, 1028
AccII CGCG 2 cut(s) 170, 917
AciI CCGC 5 cut(s) 285, 514, 915, 917, 1065
AclWI GGATC 2 cut(s) 12, 867
AcoI YGGCCR 1 cut(s) 573
AcsI RAATTY 2 cut(s) 105, 593
AcuI CTGAAG 3 cut(s) 654, 714, 831
AcyI GRCGYC 1 cut(s) 1029
AfaI GTAC 2 cut(s) 442, 475
AfiI CCNNNNNNNGG 2 cut(s) 778, 966
AflII CTTAAG 1 cut(s) 727
AgsI TTSAA 5 cut(s) 88, 526, 788, 908, 973
AjnI CCWGG 1 cut(s) 898
Alw21I GWGCWC 3 cut(s) 49, 771, 1016
Alw26I GTCTC 1 cut(s) 717
AlwI GGATC 2 cut(s) 12, 867
AlwNI CAGNNNCTG 1 cut(s) 619
Ama87I CYCGRG 1 cut(s) 163
AoxI GGCC 4 cut(s) 359, 462, 573, 1005
ApeKI GCWGC 8 cut(s) 250, 253, 263, 278, 281, 610, 613, 701
ApoI RAATTY 2 cut(s) 105, 593
AspLEI GCGC 3 cut(s) 170, 312, 1031
AspS9I GGNCC 2 cut(s) 360, 928
AvaI CYCGRG 1 cut(s) 163
AvaII GGWCC 1 cut(s) 928
BalI TGGCCA 1 cut(s) 575
BanI GGYRCC 3 cut(s) 16, 320, 1028
BanII GRGCYC 3 cut(s) 49, 771, 1016
Bbv12I GWGCWC 3 cut(s) 49, 771, 1016
BbvCI CCTCAGC 1 cut(s) 839
BbvI GCAGC 8 cut(s) 250, 262, 265, 268, 290, 597, 625, 688
BccI CCATC 2 cut(s) 464, 580
BciT130I CCWGG 1 cut(s) 900
BcoDI GTCTC 1 cut(s) 717
BfaI CTAG 4 cut(s) 50, 650, 720, 875
BfmI CTRYAG 2 cut(s) 375, 611
BfoI RGCGCY 1 cut(s) 1032
BfrI CTTAAG 1 cut(s) 727
BglI GCCNNNNNGGC 1 cut(s) 318
BisI GCNGC 9 cut(s) 251, 254, 264, 279, 282, 285, 611, 614, 702
BlpI GCTNAGC 2 cut(s) 205, 1015
BlsI GCNGC 9 cut(s) 252, 255, 265, 280, 283, 286, 612, 615, 703
Bme1390I CCNGG 1 cut(s) 900
Bme18I GGWCC 1 cut(s) 928
BmeT110I CYCGRG 1 cut(s) 163
BmgT120I GGNCC 2 cut(s) 360, 928
BmiI GGNNCC 3 cut(s) 18, 322, 1030
BmrFI CCNGG 1 cut(s) 900
BmrI ACTGGG 1 cut(s) 486
BmuI ACTGGG 1 cut(s) 486
Bpu10I CCTNAGC 1 cut(s) 839
Bpu1102I GCTNAGC 2 cut(s) 205, 1015
BpuEI CTTGAG 1 cut(s) 149
BsaHI GRCGYC 1 cut(s) 1029
BsaJI CCNNGG 2 cut(s) 465, 915
Bsc4I CCNNNNNNNGG 2 cut(s) 778, 966
Bse1I ACTGG 2 cut(s) 64, 481
Bse3DI GCAATG 1 cut(s) 70
BseBI CCWGG 1 cut(s) 900
BseDI CCNNGG 2 cut(s) 465, 915
BseGI GGATG 1 cut(s) 475
BseLI CCNNNNNNNGG 2 cut(s) 778, 966
BseMI GCAATG 1 cut(s) 70
BseMII CTCAG 4 cut(s) 219, 853, 959, 1029
BseNI ACTGG 2 cut(s) 64, 481
BseRI GAGGAG 1 cut(s) 563
BseXI GCAGC 8 cut(s) 250, 262, 265, 268, 290, 597, 625, 688
BsgI GTGCAG 1 cut(s) 814
Bsh1236I CGCG 2 cut(s) 170, 917
BshFI GGCC 4 cut(s) 361, 464, 575, 1007
BshNI GGYRCC 3 cut(s) 16, 320, 1028
BsiHKAI GWGCWC 3 cut(s) 49, 771, 1016
BsiHKCI CYCGRG 1 cut(s) 163
BslFI GGGAC 1 cut(s) 835
BslI CCNNNNNNNGG 2 cut(s) 778, 966
BsmAI GTCTC 1 cut(s) 717
BsmFI GGGAC 1 cut(s) 835
BsmI GAATGC 2 cut(s) 193, 300
BsnI GGCC 4 cut(s) 361, 464, 575, 1007
BsoBI CYCGRG 1 cut(s) 163
Bsp1286I GDGCHC 3 cut(s) 49, 771, 1016
Bsp143I GATC 2 cut(s) 4, 859
Bsp1720I GCTNAGC 2 cut(s) 205, 1015
BspACI CCGC 5 cut(s) 285, 514, 915, 917, 1065
BspANI GGCC 4 cut(s) 361, 464, 575, 1007
BspCNI CTCAG 4 cut(s) 218, 852, 958, 1028
BspFNI CGCG 2 cut(s) 170, 917
BspLI GGNNCC 3 cut(s) 18, 322, 1030
BspMAI CTGCAG 1 cut(s) 615
BspPI GGATC 2 cut(s) 12, 867
BspQI GCTCTTC 1 cut(s) 759
BspT107I GGYRCC 3 cut(s) 16, 320, 1028
BspTI CTTAAG 1 cut(s) 727
BsrDI GCAATG 1 cut(s) 70
BsrI ACTGG 2 cut(s) 64, 481
BssECI CCNNGG 2 cut(s) 465, 915
BssMI GATC 2 cut(s) 4, 859
BssNI GRCGYC 1 cut(s) 1029
BssT1I CCWWGG 1 cut(s) 465
Bst2UI CCWGG 1 cut(s) 900
Bst4CI ACNGT 3 cut(s) 95, 675, 849
Bst6I CTCTTC 8 cut(s) 630, 648, 654, 690, 759, 807, 812, 915
BstACI GRCGYC 1 cut(s) 1029
BstAFI CTTAAG 1 cut(s) 727
BstAPI GCANNNNNTGC 1 cut(s) 619
BstC8I GCNNGC 3 cut(s) 183, 690, 1021
BstDEI CTNAG 4 cut(s) 205, 839, 945, 1015
BstDSI CCRYGG 1 cut(s) 915
BstF5I GGATG 1 cut(s) 475
BstFNI CGCG 2 cut(s) 170, 917
BstH2I RGCGCY 1 cut(s) 1032
BstHHI GCGC 3 cut(s) 170, 312, 1031
BstKTI GATC 2 cut(s) 7, 862
BstMAI GTCTC 1 cut(s) 717
BstMBI GATC 2 cut(s) 4, 859
BstMWI GCNNNNNNNGC 8 cut(s) 284, 318, 367, 619, 698, 707, 716, 1020
BstNI CCWGG 1 cut(s) 900
BstNSI RCATGY 1 cut(s) 233
BstSCI CCNGG 1 cut(s) 898
BstSFI CTRYAG 2 cut(s) 375, 611
BstUI CGCG 2 cut(s) 170, 917
BstV1I GCAGC 8 cut(s) 250, 262, 265, 268, 290, 597, 625, 688
BstX2I RGATCY 1 cut(s) 859
BstYI RGATCY 1 cut(s) 859
BsuRI GGCC 4 cut(s) 361, 464, 575, 1007
BtgI CCRYGG 1 cut(s) 915
BtgZI GCGATG 1 cut(s) 548
BtsCI GGATG 1 cut(s) 475
Cac8I GCNNGC 3 cut(s) 183, 690, 1021
CaiI CAGNNNCTG 1 cut(s) 619
CfoI GCGC 3 cut(s) 170, 312, 1031
Cfr13I GGNCC 2 cut(s) 360, 928
Cfr42I CCGCGG 1 cut(s) 918
CseI GACGC 2 cut(s) 320, 950
Csp6I GTAC 2 cut(s) 441, 474
CspCI CAANNNNNGTGG 2 cut(s) 332, 367
CviAII CATG 7 cut(s) 38, 230, 307, 357, 401, 566, 707
CviQI GTAC 2 cut(s) 441, 474
DdeI CTNAG 4 cut(s) 205, 839, 945, 1015
DinI GGCGCC 1 cut(s) 1030
DpnI GATC 2 cut(s) 6, 861
DpnII GATC 2 cut(s) 4, 859
EaeI YGGCCR 1 cut(s) 573
Eam1104I CTCTTC 8 cut(s) 630, 648, 654, 690, 759, 807, 812, 915
EarI CTCTTC 8 cut(s) 630, 648, 654, 690, 759, 807, 812, 915
Ecl136II GAGCTC 3 cut(s) 47, 769, 1014
Eco130I CCWWGG 1 cut(s) 465
Eco24I GRGCYC 3 cut(s) 49, 771, 1016
Eco32I GATATC 1 cut(s) 937
Eco47I GGWCC 1 cut(s) 928
Eco53kI GAGCTC 3 cut(s) 47, 769, 1014
Eco57I CTGAAG 3 cut(s) 654, 714, 831
Eco88I CYCGRG 1 cut(s) 163
EcoICRI GAGCTC 3 cut(s) 47, 769, 1014
EcoRII CCWGG 1 cut(s) 898
EcoRV GATATC 1 cut(s) 937
EcoT14I CCWWGG 1 cut(s) 465
EcoT22I ATGCAT 1 cut(s) 759
EcoT38I GRGCYC 3 cut(s) 49, 771, 1016
EgeI GGCGCC 1 cut(s) 1030
EheI GGCGCC 1 cut(s) 1030
ErhI CCWWGG 1 cut(s) 465
FaeI CATG 7 cut(s) 41, 233, 310, 360, 404, 569, 710
FaqI GGGAC 1 cut(s) 835
FatI CATG 7 cut(s) 37, 229, 306, 356, 400, 565, 706
Fnu4HI GCNGC 9 cut(s) 251, 254, 264, 279, 282, 285, 611, 614, 702
FokI GGATG 1 cut(s) 482
FriOI GRGCYC 3 cut(s) 49, 771, 1016
Fsp4HI GCNGC 9 cut(s) 251, 254, 264, 279, 282, 285, 611, 614, 702
FspBI CTAG 4 cut(s) 50, 650, 720, 875
GlaI GCGC 3 cut(s) 169, 311, 1030
GluI GCNGC 9 cut(s) 251, 254, 264, 279, 282, 285, 611, 614, 702
HaeII RGCGCY 1 cut(s) 1032
HaeIII GGCC 4 cut(s) 361, 464, 575, 1007
HgaI GACGC 2 cut(s) 320, 950
HhaI GCGC 3 cut(s) 170, 312, 1031
Hin1I GRCGYC 1 cut(s) 1029
Hin1II CATG 7 cut(s) 41, 233, 310, 360, 404, 569, 710
Hin6I GCGC 3 cut(s) 168, 310, 1029
HinP1I GCGC 3 cut(s) 168, 310, 1029
HincII GTYRAC 2 cut(s) 121, 807
HindII GTYRAC 2 cut(s) 121, 807
HindIII AAGCTT 3 cut(s) 125, 686, 824
HinfI GANTC 2 cut(s) 80, 953
Hpy166II GTNNAC 4 cut(s) 121, 398, 807, 928
Hpy188I TCNGA 3 cut(s) 237, 773, 948
Hpy188III TCNNGA 2 cut(s) 50, 1164
Hpy8I GTNNAC 4 cut(s) 121, 398, 807, 928
Hpy99I CGWCG 1 cut(s) 944
HpyAV CCTTC 3 cut(s) 208, 380, 979
HpyCH4III ACNGT 3 cut(s) 95, 675, 849
HpyCH4IV ACGT 1 cut(s) 489
HpyCH4V TGCA 8 cut(s) 191, 266, 298, 370, 613, 757, 795, 887
HpyF10VI GCNNNNNNNGC 8 cut(s) 284, 318, 367, 619, 698, 707, 716, 1020
HpyF3I CTNAG 4 cut(s) 205, 839, 945, 1015
HpySE526I ACGT 1 cut(s) 489
Hsp92I GRCGYC 1 cut(s) 1029
Hsp92II CATG 7 cut(s) 41, 233, 310, 360, 404, 569, 710
HspAI GCGC 3 cut(s) 168, 310, 1029
KasI GGCGCC 1 cut(s) 1028
KspI CCGCGG 1 cut(s) 918
Kzo9I GATC 2 cut(s) 4, 859
LguI GCTCTTC 1 cut(s) 759
LmnI GCTCC 2 cut(s) 44, 774
Lsp1109I GCAGC 8 cut(s) 250, 262, 265, 268, 290, 597, 625, 688
MaeI CTAG 4 cut(s) 50, 650, 720, 875
MaeII ACGT 1 cut(s) 489
MaeIII GTNAC 2 cut(s) 628, 1067
MalI GATC 2 cut(s) 6, 861
MboI GATC 2 cut(s) 4, 859
MboII GAAGA 9 cut(s) 256, 647, 665, 671, 707, 776, 824, 829, 932
MfeI CAATTG 1 cut(s) 21
MflI RGATCY 1 cut(s) 859
MhlI GDGCHC 3 cut(s) 49, 771, 1016
MlsI TGGCCA 1 cut(s) 575
MluCI AATT 6 cut(s) 21, 105, 314, 336, 444, 593
MluNI TGGCCA 1 cut(s) 575
Mly113I GGCGCC 1 cut(s) 1029
MlyI GAGTC 1 cut(s) 89
MmeI TCCRAC 1 cut(s) 22
Mox20I TGGCCA 1 cut(s) 575
Mph1103I ATGCAT 1 cut(s) 759
MscI TGGCCA 1 cut(s) 575
MseI TTAA 3 cut(s) 447, 677, 728
Msp20I TGGCCA 1 cut(s) 575
MspA1I CMGCKG 4 cut(s) 209, 281, 917, 1065
MspCI CTTAAG 1 cut(s) 727
MspR9I CCNGG 1 cut(s) 900
MunI CAATTG 1 cut(s) 21
Mva1269I GAATGC 2 cut(s) 193, 300
MvaI CCWGG 1 cut(s) 900
MvnI CGCG 2 cut(s) 170, 917
MwoI GCNNNNNNNGC 8 cut(s) 284, 318, 367, 619, 698, 707, 716, 1020
NarI GGCGCC 1 cut(s) 1029
NdeII GATC 2 cut(s) 4, 859
NlaIII CATG 7 cut(s) 41, 233, 310, 360, 404, 569, 710
NlaIV GGNNCC 3 cut(s) 18, 322, 1030
NmeAIII GCCGAG 1 cut(s) 103
NsiI ATGCAT 1 cut(s) 759
NspI RCATGY 1 cut(s) 233
PaeR7I CTCGAG 1 cut(s) 163
PciSI GCTCTTC 1 cut(s) 759
PctI GAATGC 2 cut(s) 193, 300
PfeI GAWTC 1 cut(s) 953
PkrI GCNGC 9 cut(s) 252, 255, 265, 280, 283, 286, 612, 615, 703
PleI GAGTC 1 cut(s) 88
PluTI GGCGCC 1 cut(s) 1032
PpsI GAGTC 1 cut(s) 88
Psp124BI GAGCTC 3 cut(s) 49, 771, 1016
Psp6I CCWGG 1 cut(s) 898
PspGI CCWGG 1 cut(s) 898
PspN4I GGNNCC 3 cut(s) 18, 322, 1030
PspPI GGNCC 2 cut(s) 360, 928
PspXI VCTCGAGB 1 cut(s) 163
PstI CTGCAG 1 cut(s) 615
PstNI CAGNNNCTG 1 cut(s) 619
PsuI RGATCY 1 cut(s) 859
PvuII CAGCTG 2 cut(s) 209, 281
RsaI GTAC 2 cut(s) 442, 475
RsaNI GTAC 2 cut(s) 441, 474
SacI GAGCTC 3 cut(s) 49, 771, 1016
SacII CCGCGG 1 cut(s) 918
SapI GCTCTTC 1 cut(s) 759
SaqAI TTAA 3 cut(s) 447, 677, 728
SatI GCNGC 9 cut(s) 251, 254, 264, 279, 282, 285, 611, 614, 702
Sau3AI GATC 2 cut(s) 4, 859
Sau96I GGNCC 2 cut(s) 360, 928
SchI GAGTC 1 cut(s) 89
ScrFI CCNGG 1 cut(s) 900
SduI GDGCHC 3 cut(s) 49, 771, 1016
SfcI CTRYAG 2 cut(s) 375, 611
SfoI GGCGCC 1 cut(s) 1030
Sfr274I CTCGAG 1 cut(s) 163
Sfr303I CCGCGG 1 cut(s) 918
SgrBI CCGCGG 1 cut(s) 918
SinI GGWCC 1 cut(s) 928
SlaI CTCGAG 1 cut(s) 163
SmlI CTYRAG 3 cut(s) 128, 163, 727
SmoI CTYRAG 3 cut(s) 128, 163, 727
Sse9I AATT 6 cut(s) 21, 105, 314, 336, 444, 593
SsiI CCGC 5 cut(s) 285, 514, 915, 917, 1065
SspDI GGCGCC 1 cut(s) 1028
SspMI CTAG 4 cut(s) 50, 650, 720, 875
SstI GAGCTC 3 cut(s) 49, 771, 1016
StyD4I CCNGG 1 cut(s) 898
StyI CCWWGG 1 cut(s) 465
TaaI ACNGT 3 cut(s) 95, 675, 849
TaiI ACGT 1 cut(s) 492
TaqI TCGA 2 cut(s) 164, 939
TasI AATT 6 cut(s) 21, 105, 314, 336, 444, 593
TatI WGTACW 1 cut(s) 440
TauI GCSGC 1 cut(s) 287
TfiI GAWTC 1 cut(s) 953
Tru1I TTAA 3 cut(s) 447, 677, 728
Tru9I TTAA 3 cut(s) 447, 677, 728
TseI GCWGC 8 cut(s) 250, 253, 263, 278, 281, 610, 613, 701
TspDTI ATGAA 5 cut(s) 117, 257, 551, 554, 698
Vha464I CTTAAG 1 cut(s) 727
VpaK11BI GGWCC 1 cut(s) 928
XapI RAATTY 2 cut(s) 105, 593
XbaI TCTAGA 1 cut(s) 49
XceI RCATGY 1 cut(s) 233
XcmI CCANNNNNNNNNTGG 1 cut(s) 583
XhoI CTCGAG 1 cut(s) 163
XspI CTAG 4 cut(s) 50, 650, 720, 875
Zsp2I ATGCAT 1 cut(s) 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.