Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0000336

Physical Location & Seq

Genomic Coordinates Forward (+)

53473762 .. 53495139

Gene Structure 21378 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG378400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGACTGCGCTTGGATTCTTCAACAGAATGCAACTATCCGGCGTTAAGCCTGATTGGTTAACACTAGTGAGTTTGGCTTCCATTATAGCTCAATTAAATGATGCTGAAATGAGTAGGTCTGTTTATGGATTCATTTTGAGGAGAGATTGGTTCAAGGAAGATGTTGTTATTGGAAATGCAGTTGTGGACATGTATGCAAAGTTGGGTGCTGTAGATTCTGCACGTACTGTTTTTGAAGGACTTCCTGTCAAGGATGTGGTTTCATGGAATACTTTGATCACAGGTTACACTCAAAATGGTCTTGCAAGTGAGGCGAATGAAGTGTACTGTATGATGCAAGAGTGCAAAGAAATAATTCCAAACCAAGGAACTTGGTTCATTGTTGTTCGAGATAGGCGTTCTCAGAAGATCATCTCTCCTAGGAATGAAACTCTGCTGGAAAGCACCGCTGATTCTAACGTTACTATAGAAAGCCCCCGGATGGATCATATAGTGTCTTGTTATAAGGGGACCCACCTAAGAAGGAAACCGACCTCAGAACACTCAGGTGTAATCGCAAGAACTTCAGAGCAGAACCCTGCATGTCATCAGGATTCAGTTGGCAGTGCTGCAGAAGTTTCGGGTCAGAACTTTGTGGATGAGGACAACAGAGGGAAGCTAAACTGTGAATTCATTCCAAAAAGGCTTAAAAGGGCTTCACCCAACTTTTCCAGCAATGATCAAGTATGTTCTTTTTTCCAGCTTGTGCCATTGGGAAATTTTGATACAAAGGAGTGCTGTGCTGGGATAGAGGCTGGAGAAGTGCAAGTGGTGACTGAGCAAAGCGAACCGGATCAGGGACAGTCATTGAATTCTGGCAGTAAGAAGATTGTGCAGCAAGTGGAGTCAGAGCAGGTTGTGGTGGTTGAGAATACTAGGCACCGAAAGTGGGATGAGATAGATGGGGTGTCACCAAAAAAGCCCCGGTTGAGCCTAGCTGTGGGGAGGGTTAATCTTGATGCAGGGTCAATAGAGCTATCGAAACTGAAGAAGGTGATTTCATATCCAAAGAAGCGTGGTAGGCCACGGGATGCAAAGAACAAAATCAAGACTGAAGTCAAGATTGTGAAGACTTCGCTTATGAAGAAAGTCAAGGCGTCAAAGAAGAAGGAGAAGTTGGTAAATGAATTGCCTGTGTTGACTAGTCCTGTTGATGTTGGTACCTCTACCCTTGAAAAAGGGAAGGAGAACCAACCAGAGGACCTCGTCGGCCGGCCAAACCCTCAGTTTCCGGAGCTACCCATCTTCTCATCGGATCCTGTTGGTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

436

Amino Acids

48.39

Weight (kDa)

8.62

Isoelectric Point (pI)

42.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	84 - 128	2.9e-07	PPR repeat family
PPR	PF01535	87 - 115	5.6e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000336)

Species	Orthologous Gene IDs
malus_domestica	MD05G1024100.v1.1
rosa_chinensis	RchiOBHm_Chr2g0152291 RchiOBHm_Chr4g0387411
rosa_laevigata	RLG00000009698 RLG00000009699 RLG00000009700 RLG00000023615 RLG00000024265 RLG00000034445 RLG00000036567
rosa_multiflora	Rmu_co8268067.1_g000001 Rmu_co8313555.1_g000001 Rmu_co8324697.1_g000001 Rmu_sc0000318.1_g000023 Rmu_sc0000342.1_g000016 Rmu_sc0000447.1_g000010 Rmu_sc0000528.1_g000009 Rmu_sc0000539.1_g000060 Rmu_sc0000929.1_g000023 Rmu_sc0001493.1_g000081 Rmu_sc0001674.1_g000003 Rmu_sc0001791.1_g000023 Rmu_sc0001822.1_g000005 Rmu_sc0001822.1_g000033 Rmu_sc0002061.1_g000010 Rmu_sc0002286.1_g000012 Rmu_sc0002979.1_g000009 Rmu_sc0003158.1_g000016 Rmu_sc0003221.1_g000001 Rmu_sc0003641.1_g000029 Rmu_sc0003742.1_g000012 Rmu_sc0003814.1_g000004 Rmu_sc0003823.1_g000005 Rmu_sc0004002.1_g000005 Rmu_sc0004564.1_g000005 Rmu_sc0005415.1_g000003 Rmu_sc0006050.1_g000025 Rmu_sc0006555.1_g000002 Rmu_sc0009954.1_g000020 Rmu_sc0010421.1_g000007 Rmu_sc0010607.1_g000002 Rmu_sc0011044.1_g000005 Rmu_sc0011497.1_g000015 Rmu_sc0014532.1_g000004 Rmu_sc0014745.1_g000005 Rmu_sc0014821.1_g000001 Rmu_sc0015038.1_g000002 Rmu_sc0015454.1_g000004 Rmu_sc0019663.1_g000002 Rmu_sc0027475.1_g000003 Rmu_sc0028826.1_g000002 Rmu_ssc0000117.1_g000019 Rmu_ssc0000175.1_g000034
rosa_roxburghii	Rroxscaffold_3G00237080 Rroxscaffold_4G00288290 Rroxscaffold_6G00397510
rosa_rugosa	Rorug01G0035000 Rorug01G0190900 Rorug01G0208500 Rorug01G0208600 Rorug01G0208600 Rorug01G0344900 Rorug01G0479500 Rorug01G0479600 Rorug02G0230400 Rorug02G0320900 Rorug02G0433300 Rorug03G0147400 Rorug03G0169700.1 Rorug03G0169800 Rorug03G0198300 Rorug04G0022900 Rorug04G0064600 Rorug04G0322100 Rorug04G0388900 Rorug05G0153200 Rorug05G0231600 Rorug05G0231700 Rorug05G0231800 Rorug05G0276200 Rorug05G0292400 Rorug05G0314700 Rorug06G0092000 Rorug06G0260900 Rorug06G0273600 RorugPtG0003200
rosa_samantha	Rh1AG264100 Rh1AG292500 Rh1AG423800 Rh2AG098000 Rh2AG232700 Rh2AG361100 Rh2AG372900 Rh2BG099200 Rh2BG246000 Rh2BG260600 Rh2BG378400 Rh3BG142300 Rh3BG252900 Rh3BG267700 Rh3DG302400 Rh5BG059800 Rh5BG320000 Rh5BG530500 Rh6AG089300 Rh6AG089400 Rh6AG127400 Rh6AG376700 Rh7CG488700 Rh7DG265900
rosa_wichuraiana	Rw2G040640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	504
Acc36I	ACCTGC	1 cut(s)	883
Acc65I	GGTACC	1 cut(s)	1199
AccB1I	GGYRCC	2 cut(s)	918, 1199
AccIII	TCCGGA	1 cut(s)	1270
AciI	CCGC	1 cut(s)	447
AclI	AACGTT	1 cut(s)	459
AclWI	GGATC	4 cut(s)	492, 840, 1289, 1302
AcoI	YGGCCR	2 cut(s)	1249, 1253
AcsI	RAATTY	3 cut(s)	668, 757, 850
AcuI	CTGAAG	3 cut(s)	549, 1046, 1113
AcyI	GRCGYC	1 cut(s)	1136
AfaI	GTAC	3 cut(s)	226, 326, 1201
AfiI	CCNNNNNNNGG	6 cut(s)	365, 481, 836, 928, 979, 1237
AflIII	ACRYGT	1 cut(s)	189
AgsI	TTSAA	5 cut(s)	22, 154, 236, 850, 1214
AhdI	GACNNNNNGTC	1 cut(s)	245
AhlI	ACTAGT	2 cut(s)	64, 1181
AjuI	GAANNNNNNNTTGG	2 cut(s)	1139, 1171
AleI	CACNNNNGTG	1 cut(s)	546
AluBI	AGCT	6 cut(s)	89, 658, 742, 977, 1015, 1276
AluI	AGCT	6 cut(s)	89, 658, 742, 977, 1015, 1276
AlwI	GGATC	4 cut(s)	492, 840, 1289, 1302
Aor13HI	TCCGGA	1 cut(s)	1270
AoxI	GGCC	3 cut(s)	1061, 1249, 1253
ApeKI	GCWGC	2 cut(s)	608, 874
ApoI	RAATTY	3 cut(s)	668, 757, 850
Asp700I	GAANNNNTTC	3 cut(s)	240, 354, 672
Asp718I	GGTACC	1 cut(s)	1199
AspA2I	CCTAGG	1 cut(s)	419
AspLEI	GCGC	1 cut(s)	10
AspS9I	GGNCC	2 cut(s)	510, 1240
AsuC2I	CCSGG	2 cut(s)	478, 964
AsuHPI	GGTGA	4 cut(s)	690, 823, 942, 1045
AvaII	GGWCC	2 cut(s)	510, 1240
AvrII	CCTAGG	1 cut(s)	419
BamHI	GGATCC	1 cut(s)	1294
BanI	GGYRCC	2 cut(s)	918, 1199
BbsI	GAAGAC	1 cut(s)	1115
BbvI	GCAGC	2 cut(s)	595, 886
BccI	CCATC	3 cut(s)	475, 935, 1289
BcgI	CGANNNNNNTGC	2 cut(s)	600, 634
BclI	TGATCA	2 cut(s)	276, 718
BcnI	CCSGG	2 cut(s)	478, 964
BcuI	ACTAGT	2 cut(s)	64, 1181
BfaI	CTAG	5 cut(s)	65, 420, 915, 974, 1182
BfmI	CTRYAG	3 cut(s)	210, 465, 609
BfuAI	ACCTGC	1 cut(s)	883
BisI	GCNGC	2 cut(s)	609, 875
BlnI	CCTAGG	1 cut(s)	419
BlsI	GCNGC	2 cut(s)	610, 876
Bme1390I	CCNGG	2 cut(s)	478, 964
Bme18I	GGWCC	2 cut(s)	510, 1240
BmeRI	GACNNNNNGTC	1 cut(s)	245
BmgT120I	GGNCC	2 cut(s)	510, 1240
BmiI	GGNNCC	5 cut(s)	511, 512, 920, 1201, 1296
BmrFI	CCNGG	2 cut(s)	478, 964
BmsI	GCATC	4 cut(s)	91, 324, 988, 1060
BoxI	GACNNNNGTC	1 cut(s)	1094
BpiI	GAAGAC	1 cut(s)	1115
BpmI	CTGGAG	1 cut(s)	816
BpuMI	CCSGG	2 cut(s)	478, 964
BsaAI	YACGTR	1 cut(s)	224
BsaHI	GRCGYC	1 cut(s)	1136
BsaJI	CCNNGG	5 cut(s)	364, 419, 476, 962, 1064
BsaWI	WCCGGW	2 cut(s)	829, 1270
Bsc4I	CCNNNNNNNGG	6 cut(s)	365, 481, 836, 928, 979, 1237
Bse118I	RCCGGY	1 cut(s)	1251
Bse3DI	GCAATG	1 cut(s)	721
BseAI	TCCGGA	1 cut(s)	1270
BseDI	CCNNGG	5 cut(s)	364, 419, 476, 962, 1064
BseGI	GGATG	5 cut(s)	259, 486, 643, 937, 1075
BseLI	CCNNNNNNNGG	6 cut(s)	365, 481, 836, 928, 979, 1237
BseMI	GCAATG	1 cut(s)	721
BseMII	CTCAG	5 cut(s)	416, 549, 558, 807, 1277
BseRI	GAGGAG	1 cut(s)	154
BseX3I	CGGCCG	1 cut(s)	1249
BseXI	GCAGC	2 cut(s)	595, 886
BseYI	CCCAGC	1 cut(s)	782
BsgI	GTGCAG	2 cut(s)	204, 893
Bsh1285I	CGRYCG	1 cut(s)	1252
BshFI	GGCC	3 cut(s)	1063, 1251, 1255
BshNI	GGYRCC	2 cut(s)	918, 1199
BsiEI	CGRYCG	1 cut(s)	1252
BsiSI	CCGG	6 cut(s)	39, 478, 830, 964, 1252, 1271
BslFI	GGGAC	2 cut(s)	523, 852
BslI	CCNNNNNNNGG	6 cut(s)	365, 481, 836, 928, 979, 1237
BsmFI	GGGAC	2 cut(s)	523, 852
BsmI	GAATGC	1 cut(s)	33
BsnI	GGCC	3 cut(s)	1063, 1251, 1255
Bsp13I	TCCGGA	1 cut(s)	1270
Bsp143I	GATC	6 cut(s)	276, 408, 484, 718, 832, 1294
BspACI	CCGC	1 cut(s)	447
BspANI	GGCC	3 cut(s)	1063, 1251, 1255
BspCNI	CTCAG	5 cut(s)	415, 548, 557, 808, 1276
BspEI	TCCGGA	1 cut(s)	1270
BspLI	GGNNCC	5 cut(s)	511, 512, 920, 1201, 1296
BspMAI	CTGCAG	1 cut(s)	613
BspMI	ACCTGC	1 cut(s)	883
BspPI	GGATC	4 cut(s)	492, 840, 1289, 1302
BspT107I	GGYRCC	2 cut(s)	918, 1199
BsrDI	GCAATG	1 cut(s)	721
BsrFI	RCCGGY	1 cut(s)	1251
BssAI	RCCGGY	1 cut(s)	1251
BssECI	CCNNGG	5 cut(s)	364, 419, 476, 962, 1064
BssMI	GATC	6 cut(s)	276, 408, 484, 718, 832, 1294
BssNI	GRCGYC	1 cut(s)	1136
BssT1I	CCWWGG	2 cut(s)	364, 419
Bst4CI	ACNGT	4 cut(s)	229, 329, 665, 843
BstACI	GRCGYC	1 cut(s)	1136
BstBAI	YACGTR	1 cut(s)	224
BstC8I	GCNNGC	1 cut(s)	1253
BstDEI	CTNAG	6 cut(s)	402, 518, 535, 544, 816, 1263
BstDSI	CCRYGG	1 cut(s)	1064
BstF5I	GGATG	5 cut(s)	259, 486, 643, 937, 1075
BstHHI	GCGC	1 cut(s)	10
BstKTI	GATC	6 cut(s)	279, 411, 487, 721, 835, 1297
BstMBI	GATC	6 cut(s)	276, 408, 484, 718, 832, 1294
BstMCI	CGRYCG	1 cut(s)	1252
BstMWI	GCNNNNNNNGC	2 cut(s)	311, 1060
BstNSI	RCATGY	2 cut(s)	193, 585
BstPAI	GACNNNNGTC	1 cut(s)	1094
BstSCI	CCNGG	2 cut(s)	476, 962
BstSFI	CTRYAG	3 cut(s)	210, 465, 609
BstV1I	GCAGC	2 cut(s)	595, 886
BstV2I	GAAGAC	1 cut(s)	1115
BstX2I	RGATCY	1 cut(s)	1294
BstYI	RGATCY	1 cut(s)	1294
BstZI	CGGCCG	1 cut(s)	1249
BsuRI	GGCC	3 cut(s)	1063, 1251, 1255
BtgI	CCRYGG	1 cut(s)	1064
BtsCI	GGATG	5 cut(s)	259, 486, 643, 937, 1075
BtsI	GCAGTG	1 cut(s)	610
BtsIMutI	CAGTG	1 cut(s)	610
BveI	ACCTGC	1 cut(s)	883
Cac8I	GCNNGC	1 cut(s)	1253
CfoI	GCGC	1 cut(s)	10
Cfr10I	RCCGGY	1 cut(s)	1251
Cfr13I	GGNCC	2 cut(s)	510, 1240
CseI	GACGC	1 cut(s)	1125
Csp6I	GTAC	3 cut(s)	225, 325, 1200
CviAII	CATG	3 cut(s)	190, 264, 582
CviQI	GTAC	3 cut(s)	225, 325, 1200
DdeI	CTNAG	6 cut(s)	402, 518, 535, 544, 816, 1263
DpnI	GATC	6 cut(s)	278, 410, 486, 720, 834, 1296
DpnII	GATC	6 cut(s)	276, 408, 484, 718, 832, 1294
DriI	GACNNNNNGTC	1 cut(s)	245
EaeI	YGGCCR	2 cut(s)	1249, 1253
EagI	CGGCCG	1 cut(s)	1249
Eam1105I	GACNNNNNGTC	1 cut(s)	245
EclXI	CGGCCG	1 cut(s)	1249
Eco130I	CCWWGG	2 cut(s)	364, 419
Eco47I	GGWCC	2 cut(s)	510, 1240
Eco52I	CGGCCG	1 cut(s)	1249
Eco57I	CTGAAG	3 cut(s)	549, 1046, 1113
EcoO109I	RGGNCCY	2 cut(s)	510, 1240
EcoRI	GAATTC	2 cut(s)	668, 850
EcoT14I	CCWWGG	2 cut(s)	364, 419
ErhI	CCWWGG	2 cut(s)	364, 419
FaeI	CATG	3 cut(s)	193, 267, 585
FaqI	GGGAC	2 cut(s)	523, 852
FatI	CATG	3 cut(s)	189, 263, 581
FbaI	TGATCA	2 cut(s)	276, 718
Fnu4HI	GCNGC	2 cut(s)	609, 875
FokI	GGATG	5 cut(s)	266, 493, 650, 944, 1082
FseI	GGCCGGCC	1 cut(s)	1255
Fsp4HI	GCNGC	2 cut(s)	609, 875
FspBI	CTAG	5 cut(s)	65, 420, 915, 974, 1182
GlaI	GCGC	1 cut(s)	9
GluI	GCNGC	2 cut(s)	609, 875
GsaI	CCCAGC	1 cut(s)	786
GsuI	CTGGAG	1 cut(s)	816
HaeIII	GGCC	3 cut(s)	1063, 1251, 1255
HapII	CCGG	6 cut(s)	39, 478, 830, 964, 1252, 1271
HgaI	GACGC	1 cut(s)	1125
HhaI	GCGC	1 cut(s)	10
Hin1I	GRCGYC	1 cut(s)	1136
Hin1II	CATG	3 cut(s)	193, 267, 585
Hin6I	GCGC	1 cut(s)	8
HinP1I	GCGC	1 cut(s)	8
HincII	GTYRAC	2 cut(s)	60, 1179
HindII	GTYRAC	2 cut(s)	60, 1179
HinfI	GANTC	6 cut(s)	15, 129, 215, 452, 593, 884
HpaI	GTTAAC	1 cut(s)	60
HpaII	CCGG	6 cut(s)	39, 478, 830, 964, 1252, 1271
HphI	GGTGA	4 cut(s)	690, 823, 942, 1045
Hpy166II	GTNNAC	4 cut(s)	60, 187, 325, 1179
Hpy188I	TCNGA	7 cut(s)	405, 538, 568, 627, 889, 1294, 1310
Hpy188III	TCNNGA	6 cut(s)	389, 590, 995, 1087, 1099, 1271
Hpy8I	GTNNAC	4 cut(s)	60, 187, 325, 1179
Hpy99I	CGWCG	1 cut(s)	1250
HpyAV	CCTTC	5 cut(s)	230, 516, 1024, 1141, 1216
HpyCH4III	ACNGT	4 cut(s)	229, 329, 665, 843
HpyCH4IV	ACGT	2 cut(s)	223, 459
HpyF10VI	GCNNNNNNNGC	2 cut(s)	311, 1060
HpyF3I	CTNAG	6 cut(s)	402, 518, 535, 544, 816, 1263
HpySE526I	ACGT	2 cut(s)	223, 459
Hsp92I	GRCGYC	1 cut(s)	1136
Hsp92II	CATG	3 cut(s)	193, 267, 585
HspAI	GCGC	1 cut(s)	8
KflI	GGGWCCC	1 cut(s)	510
Kpn2I	TCCGGA	1 cut(s)	1270
KpnI	GGTACC	1 cut(s)	1203
KroI	GCCGGC	1 cut(s)	1251
KroNI	GCCGGC	1 cut(s)	1253
Ksp22I	TGATCA	2 cut(s)	276, 718
KspAI	GTTAAC	1 cut(s)	60
Kzo9I	GATC	6 cut(s)	276, 408, 484, 718, 832, 1294
LmnI	GCTCC	1 cut(s)	1273
Lsp1109I	GCAGC	2 cut(s)	595, 886
LweI	GCATC	4 cut(s)	91, 324, 988, 1060
MaeI	CTAG	5 cut(s)	65, 420, 915, 974, 1182
MaeII	ACGT	2 cut(s)	223, 459
MaeIII	GTNAC	4 cut(s)	284, 460, 811, 948
MalI	GATC	6 cut(s)	278, 410, 486, 720, 834, 1296
MboI	GATC	6 cut(s)	276, 408, 484, 718, 832, 1294
MboII	GAAGA	9 cut(s)	10, 170, 418, 877, 1039, 1120, 1135, 1156, 1276
MflI	RGATCY	1 cut(s)	1294
MluCI	AATT	6 cut(s)	92, 354, 668, 757, 850, 1166
MlyI	GAGTC	1 cut(s)	893
MroI	TCCGGA	1 cut(s)	1270
MroNI	GCCGGC	1 cut(s)	1251
MroXI	GAANNNNTTC	3 cut(s)	240, 354, 672
MseI	TTAA	5 cut(s)	45, 59, 95, 687, 990
MslI	CAYNNNNRTG	1 cut(s)	546
MspA1I	CMGCKG	1 cut(s)	449
MspI	CCGG	6 cut(s)	39, 478, 830, 964, 1252, 1271
MspR9I	CCNGG	2 cut(s)	478, 964
Mva1269I	GAATGC	1 cut(s)	33
MwoI	GCNNNNNNNGC	2 cut(s)	311, 1060
NaeI	GCCGGC	1 cut(s)	1253
NciI	CCSGG	2 cut(s)	478, 964
NdeII	GATC	6 cut(s)	276, 408, 484, 718, 832, 1294
NgoMIV	GCCGGC	1 cut(s)	1251
NlaIII	CATG	3 cut(s)	193, 267, 585
NlaIV	GGNNCC	5 cut(s)	511, 512, 920, 1201, 1296
NmuCI	GTSAC	2 cut(s)	811, 948
NspI	RCATGY	2 cut(s)	193, 585
OliI	CACNNNNGTG	1 cut(s)	546
PciI	ACATGT	1 cut(s)	189
PcsI	WCGNNNNNNNCGW	1 cut(s)	394
PctI	GAATGC	1 cut(s)	33
PdiI	GCCGGC	1 cut(s)	1253
PdmI	GAANNNNTTC	3 cut(s)	240, 354, 672
PfeI	GAWTC	5 cut(s)	15, 129, 215, 452, 593
PflFI	GACNNNGTC	1 cut(s)	1244
PkrI	GCNGC	2 cut(s)	610, 876
PleI	GAGTC	1 cut(s)	892
PpsI	GAGTC	1 cut(s)	892
Ppu21I	YACGTR	1 cut(s)	224
PpuMI	RGGWCCY	2 cut(s)	510, 1240
PscI	ACATGT	1 cut(s)	189
PshAI	GACNNNNGTC	1 cut(s)	1094
PsiI	TTATAA	1 cut(s)	504
Psp1406I	AACGTT	1 cut(s)	459
Psp5II	RGGWCCY	2 cut(s)	510, 1240
PspFI	CCCAGC	1 cut(s)	782
PspN4I	GGNNCC	5 cut(s)	511, 512, 920, 1201, 1296
PspPI	GGNCC	2 cut(s)	510, 1240
PspPPI	RGGWCCY	2 cut(s)	510, 1240
PstI	CTGCAG	1 cut(s)	613
PsuI	RGATCY	1 cut(s)	1294
PsyI	GACNNNGTC	1 cut(s)	1244
RigI	GGCCGGCC	1 cut(s)	1255
RsaI	GTAC	3 cut(s)	226, 326, 1201
RsaNI	GTAC	3 cut(s)	225, 325, 1200
RseI	CAYNNNNRTG	1 cut(s)	546
SaqAI	TTAA	5 cut(s)	45, 59, 95, 687, 990
SatI	GCNGC	2 cut(s)	609, 875
Sau3AI	GATC	6 cut(s)	276, 408, 484, 718, 832, 1294
Sau96I	GGNCC	2 cut(s)	510, 1240
SchI	GAGTC	1 cut(s)	893
ScrFI	CCNGG	2 cut(s)	478, 964
SfaNI	GCATC	4 cut(s)	91, 324, 988, 1060
SfcI	CTRYAG	3 cut(s)	210, 465, 609
SinI	GGWCC	2 cut(s)	510, 1240
SmiMI	CAYNNNNRTG	1 cut(s)	546
SpeI	ACTAGT	2 cut(s)	64, 1181
Sse9I	AATT	6 cut(s)	92, 354, 668, 757, 850, 1166
SsiI	CCGC	1 cut(s)	447
SspMI	CTAG	5 cut(s)	65, 420, 915, 974, 1182
StyD4I	CCNGG	2 cut(s)	476, 962
StyI	CCWWGG	2 cut(s)	364, 419
TaaI	ACNGT	4 cut(s)	229, 329, 665, 843
TaiI	ACGT	2 cut(s)	226, 462
TaqI	TCGA	2 cut(s)	388, 1019
TasI	AATT	6 cut(s)	92, 354, 668, 757, 850, 1166
TatI	WGTACW	1 cut(s)	324
TfiI	GAWTC	5 cut(s)	15, 129, 215, 452, 593
Tru1I	TTAA	5 cut(s)	45, 59, 95, 687, 990
Tru9I	TTAA	5 cut(s)	45, 59, 95, 687, 990
TscAI	CASTG	1 cut(s)	610
TseFI	GTSAC	2 cut(s)	811, 948
TseI	GCWGC	2 cut(s)	608, 874
Tsp45I	GTSAC	2 cut(s)	811, 948
TspDTI	ATGAA	9 cut(s)	121, 252, 333, 367, 441, 661, 1029, 1136, 1179
TspRI	CASTG	1 cut(s)	610
Tth111I	GACNNNGTC	1 cut(s)	1244
VpaK11BI	GGWCC	2 cut(s)	510, 1240
XapI	RAATTY	3 cut(s)	668, 757, 850
XceI	RCATGY	2 cut(s)	193, 585
XmaJI	CCTAGG	1 cut(s)	419
XmnI	GAANNNNTTC	3 cut(s)	240, 354, 672
XspI	CTAG	5 cut(s)	65, 420, 915, 974, 1182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.