Rmu_sc0028826.1_g000002

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0028826.1
OG0000336
Physical Location & Seq
Forward (+)
6526 .. 7716
1191 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0028826.1_g000002.1.cds

Sequence Viewer

Length: 1191 bp
atgttccggcgagcatggagaccgaatggtcaatacaccgtccaagagcatgatgaccgctttctcttcacactgtcggacccaactgatcgtaaccggattctccggggtggtccgtggggttttgacagagccccggtggttttggcaccatatgatggagttggagcaatcaaagatgtgccgcttactaaacttgctttctggatcaaggtgcgtggattaccgccggattttcacacggatcgttgccttagaagggtaggcagtgctctaggtcggtttgttcaaaaggatactacagagtttgctgtaggccgaatccgaattcgggttgaggtggacctactacagcctctcatctttcgacgtagctttacggtcgatgatggtattgtggtggatttggaatttttcttcgaaaatttgtatggcaggtgcagggactgtggtcttgtcacccatgttggcttgtcgtgttctggccctgctttgcctgttgagctacagactgctactccggtagtacgtcgaaacttggatcatgctttgaaccaggtgggtgtaatgcaggcggcggggtcaaatttggtttttggggcacagagtaccccccaggtcggtttggagagatttatgccgcatgctaaacctaaggtgaggaaagaaattcgtcggaggccttctgctggcagtggagaggggagctctagggtgcagacaacttccaatgcaccagagcttgatgggggtagtgagccaaagtctaatggattagacaaggggacgtttggagcagacagttcgacagaccatgccccaaatcaggccatgcattctcctagatgtgggatgcgtagtaagcatatggatgaggatgggccttcgccaaaaacgctgcgattgagtttggcagttagaagaactaatttggatgccatgaccatggggttgtgcaatgtcaagccggctgagcaggtatacaagaagagaggtcggcccaaaagtacaaaaaacaaagctaaggaacccaagactgtccacgcttctcctatgaaaaagtctccatcacagaatcgtaagtctccaagaaaagcggaaaatttggtgaatagtttgccggaattcaccttagttgaggttgtccgtggttccaccctgtctcaggggaaggaacctatagtttcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

396

Amino Acids

43.8

Weight (kDa)

10.01

Isoelectric Point (pI)

45.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000336)

Species Orthologous Gene IDs
malus_domestica MD05G1024100.v1.1
rosa_chinensis RchiOBHm_Chr2g0152291 RchiOBHm_Chr4g0387411
rosa_laevigata RLG00000009698 RLG00000009699 RLG00000009700 RLG00000023615 RLG00000024265 RLG00000034445 RLG00000036567
rosa_multiflora Rmu_co8268067.1_g000001 Rmu_co8313555.1_g000001 Rmu_co8324697.1_g000001 Rmu_sc0000318.1_g000023 Rmu_sc0000342.1_g000016 Rmu_sc0000447.1_g000010 Rmu_sc0000528.1_g000009 Rmu_sc0000539.1_g000060 Rmu_sc0000929.1_g000023 Rmu_sc0001493.1_g000081 Rmu_sc0001674.1_g000003 Rmu_sc0001791.1_g000023 Rmu_sc0001822.1_g000005 Rmu_sc0001822.1_g000033 Rmu_sc0002061.1_g000010 Rmu_sc0002286.1_g000012 Rmu_sc0002979.1_g000009 Rmu_sc0003158.1_g000016 Rmu_sc0003221.1_g000001 Rmu_sc0003641.1_g000029 Rmu_sc0003742.1_g000012 Rmu_sc0003814.1_g000004 Rmu_sc0003823.1_g000005 Rmu_sc0004002.1_g000005 Rmu_sc0004564.1_g000005 Rmu_sc0005415.1_g000003 Rmu_sc0006050.1_g000025 Rmu_sc0006555.1_g000002 Rmu_sc0009954.1_g000020 Rmu_sc0010421.1_g000007 Rmu_sc0010607.1_g000002 Rmu_sc0011044.1_g000005 Rmu_sc0011497.1_g000015 Rmu_sc0014532.1_g000004 Rmu_sc0014745.1_g000005 Rmu_sc0014821.1_g000001 Rmu_sc0015038.1_g000002 Rmu_sc0015454.1_g000004 Rmu_sc0019663.1_g000002 Rmu_sc0027475.1_g000003 Rmu_sc0028826.1_g000002 Rmu_ssc0000117.1_g000019 Rmu_ssc0000175.1_g000034
rosa_roxburghii Rroxscaffold_3G00237080 Rroxscaffold_4G00288290 Rroxscaffold_6G00397510
rosa_rugosa Rorug01G0035000 Rorug01G0190900 Rorug01G0208500 Rorug01G0208600 Rorug01G0208600 Rorug01G0344900 Rorug01G0479500 Rorug01G0479600 Rorug02G0230400 Rorug02G0320900 Rorug02G0433300 Rorug03G0147400 Rorug03G0169700.1 Rorug03G0169800 Rorug03G0198300 Rorug04G0022900 Rorug04G0064600 Rorug04G0322100 Rorug04G0388900 Rorug05G0153200 Rorug05G0231600 Rorug05G0231700 Rorug05G0231800 Rorug05G0276200 Rorug05G0292400 Rorug05G0314700 Rorug06G0092000 Rorug06G0260900 Rorug06G0273600 RorugPtG0003200
rosa_samantha Rh1AG264100 Rh1AG292500 Rh1AG423800 Rh2AG098000 Rh2AG232700 Rh2AG361100 Rh2AG372900 Rh2BG099200 Rh2BG246000 Rh2BG260600 Rh2BG378400 Rh3BG142300 Rh3BG252900 Rh3BG267700 Rh3DG302400 Rh5BG059800 Rh5BG320000 Rh5BG530500 Rh6AG089300 Rh6AG089400 Rh6AG127400 Rh6AG376700 Rh7CG488700 Rh7DG265900
rosa_wichuraiana Rw2G040640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 426
AasI GACNNNNNNGTC 1 cut(s) 27
Acc36I ACCTGC 2 cut(s) 426, 967
AccB1I GGYRCC 1 cut(s) 148
AccB7I CCANNNNNTGG 1 cut(s) 158
AccI GTMKAC 1 cut(s) 981
AciI CCGC 7 cut(s) 58, 185, 227, 575, 578, 641, 1097
AclWI GGATC 3 cut(s) 215, 252, 549
AcsI RAATTY 7 cut(s) 327, 410, 424, 586, 669, 1102, 1124
AfaI GTAC 3 cut(s) 528, 610, 1009
AfiI CCNNNNNNNGG 8 cut(s) 158, 259, 331, 620, 689, 826, 848, 1165
AgsI TTSAA 2 cut(s) 290, 553
AjnI CCWGG 2 cut(s) 555, 615
AluBI AGCT 5 cut(s) 375, 505, 708, 742, 1022
AluI AGCT 5 cut(s) 375, 505, 708, 742, 1022
Alw21I GWGCWC 2 cut(s) 274, 710
Alw26I GTCTC 4 cut(s) 13, 1068, 1089, 1167
AlwI GGATC 3 cut(s) 215, 252, 549
AlwNI CAGNNNCTG 1 cut(s) 447
AoxI GGCC 6 cut(s) 316, 484, 680, 828, 881, 998
ApeKI GCWGC 1 cut(s) 898
ApoI RAATTY 7 cut(s) 327, 410, 424, 586, 669, 1102, 1124
AspS9I GGNCC 6 cut(s) 79, 113, 343, 485, 881, 999
AsuC2I CCSGG 2 cut(s) 107, 137
AsuHPI GGTGA 4 cut(s) 451, 670, 1120, 1120
AsuII TTCGAA 1 cut(s) 420
AvaII GGWCC 3 cut(s) 79, 113, 343
AxyI CCTNAGG 1 cut(s) 654
BaeGI GKGCMC 1 cut(s) 604
BanI GGYRCC 1 cut(s) 148
BanII GRGCYC 2 cut(s) 136, 710
Bbv12I GWGCWC 2 cut(s) 274, 710
BbvI GCAGC 1 cut(s) 885
BccI CCATC 5 cut(s) 152, 383, 740, 872, 1075
BcgI CGANNNNNNTGC 2 cut(s) 786, 820
BciT130I CCWGG 2 cut(s) 557, 617
BciVI GTATCC 1 cut(s) 289
BcnI CCSGG 2 cut(s) 107, 137
BcoDI GTCTC 4 cut(s) 13, 1068, 1089, 1167
BfaI CTAG 3 cut(s) 275, 711, 843
BfmI CTRYAG 5 cut(s) 300, 312, 350, 506, 1179
BfuAI ACCTGC 2 cut(s) 426, 967
BfuI GTATCC 1 cut(s) 289
BisI GCNGC 4 cut(s) 185, 576, 641, 899
BlpI GCTNAGC 1 cut(s) 972
BlsI GCNGC 4 cut(s) 186, 577, 642, 900
Bme1390I CCNGG 4 cut(s) 107, 137, 557, 617
Bme18I GGWCC 3 cut(s) 79, 113, 343
BmgT120I GGNCC 6 cut(s) 79, 113, 343, 485, 881, 999
BmiI GGNNCC 5 cut(s) 81, 150, 1029, 1153, 1176
BmrFI CCNGG 4 cut(s) 107, 137, 557, 617
BmsI GCATC 2 cut(s) 843, 925
BoxI GACNNNNGTC 1 cut(s) 450
BplI GAGNNNNNCTC 2 cut(s) 692, 724
Bpu10I CCTNAGC 1 cut(s) 1023
Bpu1102I GCTNAGC 1 cut(s) 972
Bpu14I TTCGAA 1 cut(s) 420
BpuMI CCSGG 2 cut(s) 107, 137
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 6 cut(s) 106, 116, 135, 615, 945, 1147
BsaWI WCCGGW 2 cut(s) 96, 520
BsaXI ACNNNNNCTCC 2 cut(s) 502, 532
Bsc4I CCNNNNNNNGG 8 cut(s) 158, 259, 331, 620, 689, 826, 848, 1165
Bse118I RCCGGY 1 cut(s) 967
Bse21I CCTNAGG 1 cut(s) 654
Bse3DI GCAATG 1 cut(s) 964
BseBI CCWGG 2 cut(s) 557, 617
BseDI CCNNGG 6 cut(s) 106, 116, 135, 615, 945, 1147
BseGI GGATG 4 cut(s) 858, 877, 883, 940
BseLI CCNNNNNNNGG 8 cut(s) 158, 259, 331, 620, 689, 826, 848, 1165
BseMI GCAATG 1 cut(s) 964
BseMII CTCAG 2 cut(s) 963, 1178
BseSI GKGCMC 1 cut(s) 604
BseXI GCAGC 1 cut(s) 885
BsgI GTGCAG 2 cut(s) 460, 737
Bsh1285I CGRYCG 1 cut(s) 384
BshFI GGCC 6 cut(s) 318, 486, 682, 830, 883, 1000
BshNI GGYRCC 1 cut(s) 148
BsiEI CGRYCG 1 cut(s) 384
BsiHKAI GWGCWC 2 cut(s) 274, 710
BsiSI CCGG 8 cut(s) 7, 97, 106, 137, 230, 521, 968, 1121
BslFI GGGAC 2 cut(s) 458, 799
BslI CCNNNNNNNGG 8 cut(s) 158, 259, 331, 620, 689, 826, 848, 1165
BsmAI GTCTC 4 cut(s) 13, 1068, 1089, 1167
BsmFI GGGAC 2 cut(s) 458, 799
BsmI GAATGC 1 cut(s) 835
BsnI GGCC 6 cut(s) 318, 486, 682, 830, 883, 1000
Bso31I GGTCTC 1 cut(s) 13
Bsp119I TTCGAA 1 cut(s) 420
Bsp1286I GDGCHC 4 cut(s) 136, 274, 604, 710
Bsp143I GATC 4 cut(s) 88, 207, 244, 541
Bsp1720I GCTNAGC 1 cut(s) 972
Bsp19I CCATGG 1 cut(s) 945
BspACI CCGC 7 cut(s) 58, 185, 227, 575, 578, 641, 1097
BspANI GGCC 6 cut(s) 318, 486, 682, 830, 883, 1000
BspCNI CTCAG 2 cut(s) 964, 1177
BspLI GGNNCC 5 cut(s) 81, 150, 1029, 1153, 1176
BspMI ACCTGC 2 cut(s) 426, 967
BspPI GGATC 3 cut(s) 215, 252, 549
BspT104I TTCGAA 1 cut(s) 420
BspT107I GGYRCC 1 cut(s) 148
BspTNI GGTCTC 1 cut(s) 13
BsrDI GCAATG 1 cut(s) 964
BsrFI RCCGGY 1 cut(s) 967
BssAI RCCGGY 1 cut(s) 967
BssECI CCNNGG 6 cut(s) 106, 116, 135, 615, 945, 1147
BssMI GATC 4 cut(s) 88, 207, 244, 541
BssNAI GTATAC 1 cut(s) 982
BssT1I CCWWGG 1 cut(s) 945
Bst1107I GTATAC 1 cut(s) 982
Bst2UI CCWGG 2 cut(s) 557, 617
Bst4CI ACNGT 6 cut(s) 40, 75, 382, 449, 803, 1039
Bst6I CTCTTC 2 cut(s) 71, 983
BstBI TTCGAA 1 cut(s) 420
BstC8I GCNNGC 5 cut(s) 12, 573, 645, 691, 969
BstDEI CTNAG 7 cut(s) 254, 654, 972, 1023, 1132, 1164, 1188
BstDSI CCRYGG 3 cut(s) 116, 945, 1147
BstENI CCTNNNNNAGG 1 cut(s) 1163
BstF5I GGATG 4 cut(s) 858, 877, 883, 940
BstKTI GATC 4 cut(s) 91, 210, 247, 544
BstMAI GTCTC 4 cut(s) 13, 1068, 1089, 1167
BstMBI GATC 4 cut(s) 88, 207, 244, 541
BstMCI CGRYCG 1 cut(s) 384
BstMWI GCNNNNNNNGC 4 cut(s) 502, 862, 895, 973
BstNI CCWGG 2 cut(s) 557, 617
BstNSI RCATGY 1 cut(s) 647
BstPAI GACNNNNGTC 1 cut(s) 450
BstSCI CCNGG 4 cut(s) 105, 135, 555, 615
BstSFI CTRYAG 5 cut(s) 300, 312, 350, 506, 1179
BstSLI GKGCMC 1 cut(s) 604
BstV1I GCAGC 1 cut(s) 885
BstXI CCANNNNNNTGG 1 cut(s) 946
BstZ17I GTATAC 1 cut(s) 982
Bsu36I CCTNAGG 1 cut(s) 654
BsuI GTATCC 1 cut(s) 289
BsuRI GGCC 6 cut(s) 318, 486, 682, 830, 883, 1000
BtgI CCRYGG 3 cut(s) 116, 945, 1147
BtsCI GGATG 4 cut(s) 858, 877, 883, 940
BtsI GCAGTG 2 cut(s) 274, 700
BtsIMutI CAGTG 3 cut(s) 71, 274, 700
BveI ACCTGC 2 cut(s) 426, 967
Cac8I GCNNGC 5 cut(s) 12, 573, 645, 691, 969
CaiI CAGNNNCTG 1 cut(s) 447
Cfr10I RCCGGY 1 cut(s) 967
Cfr13I GGNCC 6 cut(s) 79, 113, 343, 485, 881, 999
CsiI ACCWGGT 1 cut(s) 555
Csp6I GTAC 3 cut(s) 527, 609, 1008
CspCI CAANNNNNGTGG 2 cut(s) 199, 234
CviAII CATG 9 cut(s) 15, 50, 464, 545, 644, 815, 832, 940, 946
CviQI GTAC 3 cut(s) 527, 609, 1008
DdeI CTNAG 7 cut(s) 254, 654, 972, 1023, 1132, 1164, 1188
DpnI GATC 4 cut(s) 90, 209, 246, 543
DpnII GATC 4 cut(s) 88, 207, 244, 541
DrdI GACNNNNNNGTC 1 cut(s) 27
DseDI GACNNNNNNGTC 1 cut(s) 27
Eam1104I CTCTTC 2 cut(s) 71, 983
EarI CTCTTC 2 cut(s) 71, 983
Ecl136II GAGCTC 1 cut(s) 708
Eco130I CCWWGG 1 cut(s) 945
Eco147I AGGCCT 1 cut(s) 682
Eco24I GRGCYC 2 cut(s) 136, 710
Eco31I GGTCTC 1 cut(s) 13
Eco47I GGWCC 3 cut(s) 79, 113, 343
Eco53kI GAGCTC 1 cut(s) 708
Eco81I CCTNAGG 1 cut(s) 654
EcoICRI GAGCTC 1 cut(s) 708
EcoNI CCTNNNNNAGG 1 cut(s) 1163
EcoRI GAATTC 2 cut(s) 327, 1124
EcoRII CCWGG 2 cut(s) 555, 615
EcoT14I CCWWGG 1 cut(s) 945
EcoT22I ATGCAT 1 cut(s) 837
EcoT38I GRGCYC 2 cut(s) 136, 710
ErhI CCWWGG 1 cut(s) 945
FaeI CATG 9 cut(s) 18, 53, 467, 548, 647, 818, 835, 943, 949
FaqI GGGAC 2 cut(s) 458, 799
FatI CATG 9 cut(s) 14, 49, 463, 544, 643, 814, 831, 939, 945
FauI CCCGC 1 cut(s) 571
FauNDI CATATG 2 cut(s) 154, 867
FblI GTMKAC 1 cut(s) 981
Fnu4HI GCNGC 4 cut(s) 185, 576, 641, 899
FokI GGATG 4 cut(s) 865, 884, 890, 947
FriOI GRGCYC 2 cut(s) 136, 710
Fsp4HI GCNGC 4 cut(s) 185, 576, 641, 899
FspBI CTAG 3 cut(s) 275, 711, 843
GluI GCNGC 4 cut(s) 185, 576, 641, 899
HaeIII GGCC 6 cut(s) 318, 486, 682, 830, 883, 1000
HapII CCGG 8 cut(s) 7, 97, 106, 137, 230, 521, 968, 1121
Hin1II CATG 9 cut(s) 18, 53, 467, 548, 647, 818, 835, 943, 949
HinfI GANTC 3 cut(s) 100, 321, 1075
HpaII CCGG 8 cut(s) 7, 97, 106, 137, 230, 521, 968, 1121
HphI GGTGA 4 cut(s) 451, 670, 1120, 1120
Hpy166II GTNNAC 3 cut(s) 343, 982, 1042
Hpy188I TCNGA 3 cut(s) 79, 326, 678
Hpy188III TCNNGA 1 cut(s) 205
Hpy8I GTNNAC 3 cut(s) 343, 982, 1042
Hpy99I CGWCG 3 cut(s) 372, 534, 678
HpyAV CCTTC 4 cut(s) 252, 693, 894, 1165
HpyCH4III ACNGT 6 cut(s) 40, 75, 382, 449, 803, 1039
HpyCH4IV ACGT 3 cut(s) 370, 529, 788
HpyCH4V TGCA 6 cut(s) 441, 571, 718, 734, 835, 957
HpyF10VI GCNNNNNNNGC 4 cut(s) 502, 862, 895, 973
HpyF3I CTNAG 7 cut(s) 254, 654, 972, 1023, 1132, 1164, 1188
HpySE526I ACGT 3 cut(s) 370, 529, 788
Hsp92II CATG 9 cut(s) 18, 53, 467, 548, 647, 818, 835, 943, 949
KroI GCCGGC 1 cut(s) 967
KroNI GCCGGC 1 cut(s) 969
Kzo9I GATC 4 cut(s) 88, 207, 244, 541
LmnI GCTCC 3 cut(s) 167, 705, 794
Lsp1109I GCAGC 1 cut(s) 885
LweI GCATC 2 cut(s) 843, 925
MabI ACCWGGT 1 cut(s) 555
MaeI CTAG 3 cut(s) 275, 711, 843
MaeII ACGT 3 cut(s) 370, 529, 788
MaeIII GTNAC 2 cut(s) 92, 457
MalI GATC 4 cut(s) 90, 209, 246, 543
MboI GATC 4 cut(s) 88, 207, 244, 541
MboII GAAGA 4 cut(s) 58, 409, 933, 1000
MhlI GDGCHC 4 cut(s) 136, 274, 604, 710
MluCI AATT 8 cut(s) 327, 410, 424, 586, 669, 928, 1102, 1124
MmeI TCCRAC 3 cut(s) 57, 145, 656
MnlI CCTC 8 cut(s) 331, 366, 654, 672, 694, 868, 986, 1132
Mph1103I ATGCAT 1 cut(s) 837
MroNI GCCGGC 1 cut(s) 967
MslI CAYNNNNRTG 2 cut(s) 870, 944
MspI CCGG 8 cut(s) 7, 97, 106, 137, 230, 521, 968, 1121
MspR9I CCNGG 4 cut(s) 107, 137, 557, 617
Mva1269I GAATGC 1 cut(s) 835
MvaI CCWGG 2 cut(s) 557, 617
MwoI GCNNNNNNNGC 4 cut(s) 502, 862, 895, 973
NaeI GCCGGC 1 cut(s) 969
NciI CCSGG 2 cut(s) 107, 137
NcoI CCATGG 1 cut(s) 945
NdeI CATATG 2 cut(s) 154, 867
NdeII GATC 4 cut(s) 88, 207, 244, 541
NgoMIV GCCGGC 1 cut(s) 967
NlaIII CATG 9 cut(s) 18, 53, 467, 548, 647, 818, 835, 943, 949
NlaIV GGNNCC 5 cut(s) 81, 150, 1029, 1153, 1176
NmuCI GTSAC 1 cut(s) 457
NsiI ATGCAT 1 cut(s) 837
NspI RCATGY 1 cut(s) 647
NspV TTCGAA 1 cut(s) 420
PaeI GCATGC 1 cut(s) 647
PaqCI CACCTGC 1 cut(s) 426
PceI AGGCCT 1 cut(s) 682
PctI GAATGC 1 cut(s) 835
PdiI GCCGGC 1 cut(s) 969
PfeI GAWTC 3 cut(s) 100, 321, 1075
PflMI CCANNNNNTGG 1 cut(s) 158
PkrI GCNGC 4 cut(s) 186, 577, 642, 900
PshAI GACNNNNGTC 1 cut(s) 450
Psp124BI GAGCTC 1 cut(s) 710
Psp6I CCWGG 2 cut(s) 555, 615
PspGI CCWGG 2 cut(s) 555, 615
PspN4I GGNNCC 5 cut(s) 81, 150, 1029, 1153, 1176
PspPI GGNCC 6 cut(s) 79, 113, 343, 485, 881, 999
PstNI CAGNNNCTG 1 cut(s) 447
RsaI GTAC 3 cut(s) 528, 610, 1009
RsaNI GTAC 3 cut(s) 527, 609, 1008
RseI CAYNNNNRTG 2 cut(s) 870, 944
SacI GAGCTC 1 cut(s) 710
SatI GCNGC 4 cut(s) 185, 576, 641, 899
Sau3AI GATC 4 cut(s) 88, 207, 244, 541
Sau96I GGNCC 6 cut(s) 79, 113, 343, 485, 881, 999
ScrFI CCNGG 4 cut(s) 107, 137, 557, 617
SduI GDGCHC 4 cut(s) 136, 274, 604, 710
SexAI ACCWGGT 1 cut(s) 555
SfaNI GCATC 2 cut(s) 843, 925
SfcI CTRYAG 5 cut(s) 300, 312, 350, 506, 1179
SfuI TTCGAA 1 cut(s) 420
SinI GGWCC 3 cut(s) 79, 113, 343
SmiMI CAYNNNNRTG 2 cut(s) 870, 944
SphI GCATGC 1 cut(s) 647
Sse9I AATT 8 cut(s) 327, 410, 424, 586, 669, 928, 1102, 1124
SseBI AGGCCT 1 cut(s) 682
SsiI CCGC 7 cut(s) 58, 185, 227, 575, 578, 641, 1097
SspMI CTAG 3 cut(s) 275, 711, 843
SstI GAGCTC 1 cut(s) 710
StuI AGGCCT 1 cut(s) 682
StyD4I CCNGG 4 cut(s) 105, 135, 555, 615
StyI CCWWGG 1 cut(s) 945
TaaI ACNGT 6 cut(s) 40, 75, 382, 449, 803, 1039
TaiI ACGT 3 cut(s) 373, 532, 791
TaqI TCGA 5 cut(s) 367, 384, 420, 532, 806
TaqII GACCGA 1 cut(s) 37
TasI AATT 8 cut(s) 327, 410, 424, 586, 669, 928, 1102, 1124
TatI WGTACW 1 cut(s) 1007
TauI GCSGC 3 cut(s) 187, 578, 643
TfiI GAWTC 3 cut(s) 100, 321, 1075
TscAI CASTG 3 cut(s) 78, 274, 700
TseFI GTSAC 1 cut(s) 457
TseI GCWGC 1 cut(s) 898
Tsp45I GTSAC 1 cut(s) 457
TspDTI ATGAA 1 cut(s) 1070
TspGWI ACGGA 3 cut(s) 105, 257, 1136
TspRI CASTG 3 cut(s) 78, 274, 700
Van91I CCANNNNNTGG 1 cut(s) 158
VpaK11BI GGWCC 3 cut(s) 79, 113, 343
XagI CCTNNNNNAGG 1 cut(s) 1163
XapI RAATTY 7 cut(s) 327, 410, 424, 586, 669, 1102, 1124
XceI RCATGY 1 cut(s) 647
XmiI GTMKAC 1 cut(s) 981
XspI CTAG 3 cut(s) 275, 711, 843
Zsp2I ATGCAT 1 cut(s) 837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.