Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 291 |
| AccIII | TCCGGA | 1 cut(s) | 210 |
| AclWI | GGATC | 1 cut(s) | 101 |
| AcsI | RAATTY | 1 cut(s) | 191 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 217 |
| AgsI | TTSAA | 3 cut(s) | 76, 191, 311 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 183, 215 |
| AluBI | AGCT | 1 cut(s) | 56 |
| AluI | AGCT | 1 cut(s) | 56 |
| Alw21I | GWGCWC | 1 cut(s) | 22 |
| AlwI | GGATC | 1 cut(s) | 101 |
| Aor13HI | TCCGGA | 1 cut(s) | 210 |
| AoxI | GGCC | 2 cut(s) | 106, 254 |
| ApoI | RAATTY | 1 cut(s) | 191 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 290, 322 |
| AspS9I | GGNCC | 2 cut(s) | 106, 255 |
| Bbv12I | GWGCWC | 1 cut(s) | 22 |
| BccI | CCATC | 1 cut(s) | 220 |
| BceAI | ACGGC | 1 cut(s) | 61 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 271, 305 |
| BciVI | GTATCC | 1 cut(s) | 218 |
| BclI | TGATCA | 1 cut(s) | 130 |
| BfaI | CTAG | 2 cut(s) | 116, 325 |
| BfmI | CTRYAG | 1 cut(s) | 173 |
| BfuI | GTATCC | 1 cut(s) | 218 |
| BmgT120I | GGNCC | 2 cut(s) | 106, 255 |
| BmiI | GGNNCC | 1 cut(s) | 107 |
| BmrI | ACTGGG | 1 cut(s) | 252 |
| BmsI | GCATC | 1 cut(s) | 225 |
| BmuI | ACTGGG | 1 cut(s) | 252 |
| Bsa29I | ATCGAT | 1 cut(s) | 270 |
| BsaWI | WCCGGW | 1 cut(s) | 210 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 217 |
| Bse1I | ACTGG | 1 cut(s) | 258 |
| BseAI | TCCGGA | 1 cut(s) | 210 |
| BseCI | ATCGAT | 1 cut(s) | 270 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 217 |
| BseNI | ACTGG | 1 cut(s) | 258 |
| Bsh1285I | CGRYCG | 1 cut(s) | 270 |
| BshFI | GGCC | 2 cut(s) | 108, 256 |
| BshVI | ATCGAT | 1 cut(s) | 270 |
| BsiEI | CGRYCG | 1 cut(s) | 270 |
| BsiHKAI | GWGCWC | 1 cut(s) | 22 |
| BsiSI | CCGG | 2 cut(s) | 211, 253 |
| BslFI | GGGAC | 1 cut(s) | 177 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 217 |
| BsmFI | GGGAC | 1 cut(s) | 177 |
| BsmI | GAATGC | 1 cut(s) | 86 |
| BsnI | GGCC | 2 cut(s) | 108, 256 |
| Bsp1286I | GDGCHC | 1 cut(s) | 22 |
| Bsp13I | TCCGGA | 1 cut(s) | 210 |
| Bsp143I | GATC | 3 cut(s) | 93, 130, 267 |
| BspANI | GGCC | 2 cut(s) | 108, 256 |
| BspDI | ATCGAT | 1 cut(s) | 270 |
| BspEI | TCCGGA | 1 cut(s) | 210 |
| BspLI | GGNNCC | 1 cut(s) | 107 |
| BspMAI | CTGCAG | 1 cut(s) | 177 |
| BspPI | GGATC | 1 cut(s) | 101 |
| BsrI | ACTGG | 1 cut(s) | 258 |
| BssMI | GATC | 3 cut(s) | 93, 130, 267 |
| Bst4CI | ACNGT | 1 cut(s) | 168 |
| BstDEI | CTNAG | 1 cut(s) | 140 |
| BstKTI | GATC | 3 cut(s) | 96, 133, 270 |
| BstMBI | GATC | 3 cut(s) | 93, 130, 267 |
| BstMCI | CGRYCG | 1 cut(s) | 270 |
| BstSFI | CTRYAG | 1 cut(s) | 173 |
| Bsu15I | ATCGAT | 1 cut(s) | 270 |
| BsuI | GTATCC | 1 cut(s) | 218 |
| BsuRI | GGCC | 2 cut(s) | 108, 256 |
| BsuTUI | ATCGAT | 1 cut(s) | 270 |
| BtsI | GCAGTG | 1 cut(s) | 160 |
| BtsIMutI | CAGTG | 1 cut(s) | 160 |
| Cfr13I | GGNCC | 2 cut(s) | 106, 255 |
| ClaI | ATCGAT | 1 cut(s) | 270 |
| CviAII | CATG | 1 cut(s) | 125 |
| CviJI | RGCY | 5 cut(s) | 9, 35, 56, 108, 256 |
| CviKI_1 | RGCY | 5 cut(s) | 9, 35, 56, 108, 256 |
| DdeI | CTNAG | 1 cut(s) | 140 |
| DpnI | GATC | 3 cut(s) | 95, 132, 269 |
| DpnII | GATC | 3 cut(s) | 93, 130, 267 |
| EcoO109I | RGGNCCY | 1 cut(s) | 106 |
| FaeI | CATG | 1 cut(s) | 128 |
| FaiI | YATR | 5 cut(s) | 59, 126, 149, 279, 321 |
| FaqI | GGGAC | 1 cut(s) | 177 |
| FatI | CATG | 1 cut(s) | 124 |
| FbaI | TGATCA | 1 cut(s) | 130 |
| FblI | GTMKAC | 1 cut(s) | 291 |
| FspBI | CTAG | 2 cut(s) | 116, 325 |
| HaeIII | GGCC | 2 cut(s) | 108, 256 |
| HapII | CCGG | 2 cut(s) | 211, 253 |
| Hin1II | CATG | 1 cut(s) | 128 |
| HincII | GTYRAC | 1 cut(s) | 292 |
| HindII | GTYRAC | 1 cut(s) | 292 |
| HpaII | CCGG | 2 cut(s) | 211, 253 |
| Hpy166II | GTNNAC | 1 cut(s) | 292 |
| Hpy188III | TCNNGA | 3 cut(s) | 91, 116, 211 |
| Hpy8I | GTNNAC | 1 cut(s) | 292 |
| HpyCH4III | ACNGT | 1 cut(s) | 168 |
| HpyCH4IV | ACGT | 1 cut(s) | 205 |
| HpyCH4V | TGCA | 2 cut(s) | 175, 238 |
| HpyF3I | CTNAG | 1 cut(s) | 140 |
| HpySE526I | ACGT | 1 cut(s) | 205 |
| Hsp92II | CATG | 1 cut(s) | 128 |
| Kpn2I | TCCGGA | 1 cut(s) | 210 |
| Ksp22I | TGATCA | 1 cut(s) | 130 |
| Kzo9I | GATC | 3 cut(s) | 93, 130, 267 |
| LmnI | GCTCC | 2 cut(s) | 25, 53 |
| LpnPI | CCDG | 7 cut(s) | 36, 76, 88, 224, 255, 266, 271 |
| LweI | GCATC | 1 cut(s) | 225 |
| MaeI | CTAG | 2 cut(s) | 116, 325 |
| MaeII | ACGT | 1 cut(s) | 205 |
| MalI | GATC | 3 cut(s) | 95, 132, 269 |
| MboI | GATC | 3 cut(s) | 93, 130, 267 |
| MhlI | GDGCHC | 1 cut(s) | 22 |
| MluCI | AATT | 1 cut(s) | 191 |
| MmeI | TCCRAC | 1 cut(s) | 181 |
| MnlI | CCTC | 2 cut(s) | 119, 123 |
| MroI | TCCGGA | 1 cut(s) | 210 |
| MspI | CCGG | 2 cut(s) | 211, 253 |
| Mva1269I | GAATGC | 1 cut(s) | 86 |
| NdeII | GATC | 3 cut(s) | 93, 130, 267 |
| NlaIII | CATG | 1 cut(s) | 128 |
| NlaIV | GGNNCC | 1 cut(s) | 107 |
| PctI | GAATGC | 1 cut(s) | 86 |
| Ple19I | CGATCG | 1 cut(s) | 270 |
| PspN4I | GGNNCC | 1 cut(s) | 107 |
| PspPI | GGNCC | 2 cut(s) | 106, 255 |
| PstI | CTGCAG | 1 cut(s) | 177 |
| PvuI | CGATCG | 1 cut(s) | 270 |
| SalI | GTCGAC | 1 cut(s) | 290 |
| Sau3AI | GATC | 3 cut(s) | 93, 130, 267 |
| Sau96I | GGNCC | 2 cut(s) | 106, 255 |
| SduI | GDGCHC | 1 cut(s) | 22 |
| SetI | ASST | 4 cut(s) | 58, 208, 244, 297 |
| SfaNI | GCATC | 1 cut(s) | 225 |
| SfcI | CTRYAG | 1 cut(s) | 173 |
| Sse9I | AATT | 1 cut(s) | 191 |
| SspMI | CTAG | 2 cut(s) | 116, 325 |
| TaaI | ACNGT | 1 cut(s) | 168 |
| TaiI | ACGT | 1 cut(s) | 208 |
| TaqI | TCGA | 2 cut(s) | 270, 291 |
| TasI | AATT | 1 cut(s) | 191 |
| TscAI | CASTG | 1 cut(s) | 160 |
| TspDTI | ATGAA | 1 cut(s) | 27 |
| TspRI | CASTG | 1 cut(s) | 160 |
| XapI | RAATTY | 1 cut(s) | 191 |
| XbaI | TCTAGA | 1 cut(s) | 115 |
| XmiI | GTMKAC | 1 cut(s) | 291 |
| XspI | CTAG | 2 cut(s) | 116, 325 |