Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000336

Physical Location & Seq

Genomic Coordinates Forward (+)

33743593 .. 33747531

Gene Structure 3939 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0292400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGCTGAAGGAAATGAACAGAGAGACAAACTTCCACAGTACAGAGCTAGTCTTCAGTCATTCAATGAGAAGATGAAGACATACAGGAAGGTAATCAGTCCTGATGCCATAATGAGGCTGACATCGTCACCATTCTGGGATATTATTAAGGTGTTCCATCTTCAATTTTTAGAAGATAGTGAATGCAAGAAAGTAGATGAAGACATTTTGAGGATGGTCAGGGCGTATGACACCAAAAAGCAAGGGTTTGTGCTCGATCAAACCGTACACAAAATAACAGCTGAAGATGTGGCGACATGTCTTGGAGTGAGATTGCAAGGAGTGGCATTCCCGCTCAATAAGCACCACCAAAAGCCAAAGAACAATGGGATAATTGACAAGTACTTTGCTGATGCAAAGAAAGTAACAAAGGTCATGGTCGACAATGCACTCAAAGAAGCTTTGAAAGACCCGAAGAAACAAGTCCCAAGCGATGTCGCAAGTCTGATCGTCATGAATCTATTCATATCATTCTTGTTCTGCACCTCAGGTTATACATTGTCCTGGAAGTTGGTAGAAGTTTGCACCGACTGGACTTCTTGGCGACAATATTCATGGGCAAGCTTGATATTAGACCATCTGCATAATGGTCTAAGTAAGAAGCAGCAAGAGAAAGATGTCGCTTTGTCAGGTTGTTTGCCGCTAATCATGTATTGGTTAGCTGACAAGACAAATATTGGGGGAGCAATCAAAAGACATGAAAGAGCGACGCCAACATTTATAAAATGGTCACTCGTCGAGCTGCACAAAGAAATGGTGAAACTAACCAATGTGCAGATAGAGGAAATGTTTGACCAAAAGGTGACAGAGGAAGACCTTGCAGTGACATTACATATTATAAAAGGAAGAAACAAAGGAGCAGCAGAAGTAGAATCAAGTGAAACAAAAACAGTACATGTATTTGACAAAAATGACAGCGCTTGTAGCTTCACCTCGTTAATTCCACTTAGTATGCTTAATGACCAACGTAAAGGGTATCTTGTGGACGATACCTGTGTCATTGAAGCAACTGTTGCAGTCCCCAAGGCTGAGATGACAGCCCTAGTAAACGAAAGTGGCAGTTCTGCACCTGTGCAGCCCTTAGGTGCAGAACTACCGATGATTGCCGAGCCTCTAGATAGCCGCGCTGAGTCTCCAGTTGTCAAGGAAGAGCCTTTTTTGAGCTCCTTACCAAGTGATGAAGCCGCAGACTTCAGAGGCTTTGGTAAAGTCGACAAAGCCTTTGTTCCATTGCTGGAGGAAGTTTGTTCCTTGCACCCTTCCCTGGTTGAATGCCAGCAGAACAGAGGGGAACAGTTCACTCAATGGGCATTCACAACTTTGGGTCGACTGCTCTACTTTCTAAAGACTAGAAAGCCCAAGGATATTACAGAGGAGACTTGTCGAGAGCTGAGAAAGTTGTGGGCAGAGCTTGAGGTCTTCAGATTTGACTTGAGCTGGCTGAAGACAGATTTTGAAACAGCCTTGCGTATGAAGAATCATGTGGAAAGAGCAAGGCAAATGAGGGAGGAAATGAACGCTTTGGACACTCAAAGGAAGAGGCTTAAGGCTGAGCTAGCTGCGGTGGAAGTAGATTTTGAGGAAGCACAACGAAAAGTAGCCGATGCTGAAATGTTGCTTGAATGTGAGCTAGGCTATGGAAGGGGTGAGCCTTCATCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

566

Amino Acids

64.45

Weight (kDa)

5.96

Isoelectric Point (pI)

38.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMD	PF10536	69 - 279	5.3e-11	Plant mobile domain
MATH_2	PF22486	288 - 351	6.6e-08	MATH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000336)

Species	Orthologous Gene IDs
malus_domestica	MD05G1024100.v1.1
rosa_chinensis	RchiOBHm_Chr2g0152291 RchiOBHm_Chr4g0387411
rosa_laevigata	RLG00000009698 RLG00000009699 RLG00000009700 RLG00000023615 RLG00000024265 RLG00000034445 RLG00000036567
rosa_multiflora	Rmu_co8268067.1_g000001 Rmu_co8313555.1_g000001 Rmu_co8324697.1_g000001 Rmu_sc0000318.1_g000023 Rmu_sc0000342.1_g000016 Rmu_sc0000447.1_g000010 Rmu_sc0000528.1_g000009 Rmu_sc0000539.1_g000060 Rmu_sc0000929.1_g000023 Rmu_sc0001493.1_g000081 Rmu_sc0001674.1_g000003 Rmu_sc0001791.1_g000023 Rmu_sc0001822.1_g000005 Rmu_sc0001822.1_g000033 Rmu_sc0002061.1_g000010 Rmu_sc0002286.1_g000012 Rmu_sc0002979.1_g000009 Rmu_sc0003158.1_g000016 Rmu_sc0003221.1_g000001 Rmu_sc0003641.1_g000029 Rmu_sc0003742.1_g000012 Rmu_sc0003814.1_g000004 Rmu_sc0003823.1_g000005 Rmu_sc0004002.1_g000005 Rmu_sc0004564.1_g000005 Rmu_sc0005415.1_g000003 Rmu_sc0006050.1_g000025 Rmu_sc0006555.1_g000002 Rmu_sc0009954.1_g000020 Rmu_sc0010421.1_g000007 Rmu_sc0010607.1_g000002 Rmu_sc0011044.1_g000005 Rmu_sc0011497.1_g000015 Rmu_sc0014532.1_g000004 Rmu_sc0014745.1_g000005 Rmu_sc0014821.1_g000001 Rmu_sc0015038.1_g000002 Rmu_sc0015454.1_g000004 Rmu_sc0019663.1_g000002 Rmu_sc0027475.1_g000003 Rmu_sc0028826.1_g000002 Rmu_ssc0000117.1_g000019 Rmu_ssc0000175.1_g000034
rosa_roxburghii	Rroxscaffold_3G00237080 Rroxscaffold_4G00288290 Rroxscaffold_6G00397510
rosa_rugosa	Rorug01G0035000 Rorug01G0190900 Rorug01G0208500 Rorug01G0208600 Rorug01G0208600 Rorug01G0344900 Rorug01G0479500 Rorug01G0479600 Rorug02G0230400 Rorug02G0320900 Rorug02G0433300 Rorug03G0147400 Rorug03G0169700.1 Rorug03G0169800 Rorug03G0198300 Rorug04G0022900 Rorug04G0064600 Rorug04G0322100 Rorug04G0388900 Rorug05G0153200 Rorug05G0231600 Rorug05G0231700 Rorug05G0231800 Rorug05G0276200 Rorug05G0292400 Rorug05G0314700 Rorug06G0092000 Rorug06G0260900 Rorug06G0273600 RorugPtG0003200
rosa_samantha	Rh1AG264100 Rh1AG292500 Rh1AG423800 Rh2AG098000 Rh2AG232700 Rh2AG361100 Rh2AG372900 Rh2BG099200 Rh2BG246000 Rh2BG260600 Rh2BG378400 Rh3BG142300 Rh3BG252900 Rh3BG267700 Rh3DG302400 Rh5BG059800 Rh5BG320000 Rh5BG530500 Rh6AG089300 Rh6AG089400 Rh6AG127400 Rh6AG376700 Rh7CG488700 Rh7DG265900
rosa_wichuraiana	Rw2G040640

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	761, 878
AccBSI	CCGCTC	1 cut(s)	334
AccI	GTMKAC	3 cut(s)	420, 1251, 1366
AccII	CGCG	1 cut(s)	1164
AciI	CCGC	5 cut(s)	332, 680, 1162, 1224, 1601
AcuI	CTGAAG	6 cut(s)	27, 38, 303, 1216, 1444, 1502
AcyI	GRCGYC	1 cut(s)	749
AfaI	GTAC	4 cut(s)	41, 267, 383, 933
AfeI	AGCGCT	1 cut(s)	958
AfiI	CCNNNNNNNGG	2 cut(s)	114, 1303
AflII	CTTAAG	1 cut(s)	1583
AflIII	ACRYGT	2 cut(s)	296, 934
AgsI	TTSAA	7 cut(s)	64, 164, 445, 1043, 1310, 1496, 1661
AjnI	CCWGG	2 cut(s)	542, 1302
Alw21I	GWGCWC	2 cut(s)	255, 1205
Alw26I	GTCTC	3 cut(s)	18, 1176, 1409
Aor51HI	AGCGCT	1 cut(s)	958
ApeKI	GCWGC	5 cut(s)	643, 781, 899, 1114, 1598
ArsI	GACNNNNNNTTYG	4 cut(s)	368, 400, 1244, 1276
Asp700I	GAANNNNTTC	1 cut(s)	500
AspLEI	GCGC	2 cut(s)	959, 1166
AsuHPI	GGTGA	5 cut(s)	120, 808, 853, 961, 1697
AsuNHI	GCTAGC	1 cut(s)	1594
AxyI	CCTNAGG	2 cut(s)	526, 1120
BaeI	ACNNNNGTAYC	2 cut(s)	1020, 1053
BanII	GRGCYC	1 cut(s)	1205
BbsI	GAAGAC	6 cut(s)	44, 83, 207, 858, 1450, 1490
Bbv12I	GWGCWC	2 cut(s)	255, 1205
BbvI	GCAGC	5 cut(s)	655, 768, 911, 1126, 1585
BccI	CCATC	3 cut(s)	165, 208, 624
BciT130I	CCWGG	2 cut(s)	544, 1304
BcoDI	GTCTC	3 cut(s)	18, 1176, 1409
BfaI	CTAG	6 cut(s)	48, 1082, 1154, 1389, 1595, 1670
BfoI	RGCGCY	1 cut(s)	960
BfrI	CTTAAG	1 cut(s)	1583
BisI	GCNGC	8 cut(s)	644, 680, 782, 900, 1115, 1162, 1224, 1599
BlpI	GCTNAGC	1 cut(s)	1590
BlsI	GCNGC	8 cut(s)	645, 681, 783, 901, 1116, 1163, 1225, 1600
BmcAI	AGTACT	1 cut(s)	383
Bme1390I	CCNGG	2 cut(s)	544, 1304
BmrFI	CCNGG	2 cut(s)	544, 1304
BmsI	GCATC	3 cut(s)	94, 382, 1633
BmtI	GCTAGC	1 cut(s)	1598
BpiI	GAAGAC	6 cut(s)	44, 83, 207, 858, 1450, 1490
BpmI	CTGGAG	2 cut(s)	1158, 1295
Bpu1102I	GCTNAGC	1 cut(s)	1590
BpuEI	CTTGAG	2 cut(s)	1472, 1492
BsaHI	GRCGYC	1 cut(s)	749
BsaJI	CCNNGG	3 cut(s)	1062, 1302, 1398
Bsc4I	CCNNNNNNNGG	2 cut(s)	114, 1303
Bse1I	ACTGG	2 cut(s)	575, 1175
Bse21I	CCTNAGG	2 cut(s)	526, 1120
Bse3DI	GCAATG	1 cut(s)	1268
BseBI	CCWGG	2 cut(s)	544, 1304
BseDI	CCNNGG	3 cut(s)	1062, 1302, 1398
BseGI	GGATG	1 cut(s)	219
BseLI	CCNNNNNNNGG	2 cut(s)	114, 1303
BseMI	GCAATG	1 cut(s)	1268
BseMII	CTCAG	5 cut(s)	540, 1059, 1158, 1421, 1581
BseNI	ACTGG	2 cut(s)	575, 1175
BseRI	GAGGAG	1 cut(s)	1427
BseXI	GCAGC	5 cut(s)	655, 768, 911, 1126, 1585
BsgI	GTGCAG	6 cut(s)	505, 767, 833, 1089, 1133, 1146
Bsh1236I	CGCG	1 cut(s)	1164
BsiHKAI	GWGCWC	2 cut(s)	255, 1205
BslFI	GGGAC	2 cut(s)	449, 1043
BslI	CCNNNNNNNGG	2 cut(s)	114, 1303
BsmAI	GTCTC	3 cut(s)	18, 1176, 1409
BsmFI	GGGAC	2 cut(s)	449, 1043
BsmI	GAATGC	4 cut(s)	188, 326, 1316, 1349
Bsp1286I	GDGCHC	2 cut(s)	255, 1205
Bsp143I	GATC	2 cut(s)	256, 486
Bsp1720I	GCTNAGC	1 cut(s)	1590
BspACI	CCGC	5 cut(s)	332, 680, 1162, 1224, 1601
BspCNI	CTCAG	5 cut(s)	539, 1060, 1159, 1422, 1582
BspFNI	CGCG	1 cut(s)	1164
BspHI	TCATGA	1 cut(s)	492
BspOI	GCTAGC	1 cut(s)	1598
BspQI	GCTCTTC	1 cut(s)	1182
BspTI	CTTAAG	1 cut(s)	1583
BsrBI	CCGCTC	1 cut(s)	334
BsrDI	GCAATG	1 cut(s)	1268
BsrI	ACTGG	2 cut(s)	575, 1175
BssECI	CCNNGG	3 cut(s)	1062, 1302, 1398
BssMI	GATC	2 cut(s)	256, 486
BssNI	GRCGYC	1 cut(s)	749
BssT1I	CCWWGG	2 cut(s)	1062, 1398
Bst2UI	CCWGG	2 cut(s)	544, 1304
Bst4CI	ACNGT	5 cut(s)	39, 265, 931, 1051, 1335
Bst6I	CTCTTC	2 cut(s)	1182, 1571
BstACI	GRCGYC	1 cut(s)	749
BstAFI	CTTAAG	1 cut(s)	1583
BstAPI	GCANNNNNTGC	1 cut(s)	1052
BstC8I	GCNNGC	4 cut(s)	601, 1316, 1478, 1596
BstDEI	CTNAG	8 cut(s)	526, 632, 986, 1068, 1120, 1167, 1430, 1590
BstF5I	GGATG	1 cut(s)	219
BstFNI	CGCG	1 cut(s)	1164
BstH2I	RGCGCY	1 cut(s)	960
BstHHI	GCGC	2 cut(s)	959, 1166
BstKTI	GATC	2 cut(s)	259, 489
BstMAI	GTCTC	3 cut(s)	18, 1176, 1409
BstMBI	GATC	2 cut(s)	256, 486
BstMWI	GCNNNNNNNGC	4 cut(s)	340, 963, 1052, 1595
BstNI	CCWGG	2 cut(s)	544, 1304
BstNSI	RCATGY	2 cut(s)	300, 938
BstSCI	CCNGG	2 cut(s)	542, 1302
BstUI	CGCG	1 cut(s)	1164
BstV1I	GCAGC	5 cut(s)	655, 768, 911, 1126, 1585
BstV2I	GAAGAC	6 cut(s)	44, 83, 207, 858, 1450, 1490
Bsu36I	CCTNAGG	2 cut(s)	526, 1120
BtgZI	GCGATG	1 cut(s)	486
BtsCI	GGATG	1 cut(s)	219
BtsI	GCAGTG	1 cut(s)	867
BtsIMutI	CAGTG	1 cut(s)	867
Cac8I	GCNNGC	4 cut(s)	601, 1316, 1478, 1596
CciI	TCATGA	1 cut(s)	492
CfoI	GCGC	2 cut(s)	959, 1166
CseI	GACGC	1 cut(s)	757
Csp6I	GTAC	4 cut(s)	40, 266, 382, 932
CviAII	CATG	8 cut(s)	297, 415, 493, 594, 688, 737, 935, 1520
CviQI	GTAC	4 cut(s)	40, 266, 382, 932
DdeI	CTNAG	8 cut(s)	526, 632, 986, 1068, 1120, 1167, 1430, 1590
DpnI	GATC	2 cut(s)	258, 488
DpnII	GATC	2 cut(s)	256, 486
Eam1104I	CTCTTC	2 cut(s)	1182, 1571
EarI	CTCTTC	2 cut(s)	1182, 1571
Ecl136II	GAGCTC	1 cut(s)	1203
Eco130I	CCWWGG	2 cut(s)	1062, 1398
Eco24I	GRGCYC	1 cut(s)	1205
Eco47III	AGCGCT	1 cut(s)	958
Eco53kI	GAGCTC	1 cut(s)	1203
Eco57I	CTGAAG	6 cut(s)	27, 38, 303, 1216, 1444, 1502
Eco81I	CCTNAGG	2 cut(s)	526, 1120
EcoICRI	GAGCTC	1 cut(s)	1203
EcoRII	CCWGG	2 cut(s)	542, 1302
EcoT14I	CCWWGG	2 cut(s)	1062, 1398
EcoT38I	GRGCYC	1 cut(s)	1205
ErhI	CCWWGG	2 cut(s)	1062, 1398
FaeI	CATG	8 cut(s)	300, 418, 496, 597, 691, 740, 938, 1523
FalI	AAGNNNNNCTT	2 cut(s)	1002, 1034
FaqI	GGGAC	2 cut(s)	449, 1043
FatI	CATG	8 cut(s)	296, 414, 492, 593, 687, 736, 934, 1519
FauI	CCCGC	1 cut(s)	339
FblI	GTMKAC	3 cut(s)	420, 1251, 1366
Fnu4HI	GCNGC	8 cut(s)	644, 680, 782, 900, 1115, 1162, 1224, 1599
FokI	GGATG	1 cut(s)	226
FriOI	GRGCYC	1 cut(s)	1205
Fsp4HI	GCNGC	8 cut(s)	644, 680, 782, 900, 1115, 1162, 1224, 1599
FspBI	CTAG	6 cut(s)	48, 1082, 1154, 1389, 1595, 1670
GlaI	GCGC	2 cut(s)	958, 1165
GluI	GCNGC	8 cut(s)	644, 680, 782, 900, 1115, 1162, 1224, 1599
GsuI	CTGGAG	2 cut(s)	1158, 1295
HaeII	RGCGCY	1 cut(s)	960
HgaI	GACGC	1 cut(s)	757
HhaI	GCGC	2 cut(s)	959, 1166
Hin1I	GRCGYC	1 cut(s)	749
Hin1II	CATG	8 cut(s)	300, 418, 496, 597, 691, 740, 938, 1523
Hin6I	GCGC	2 cut(s)	957, 1164
HinP1I	GCGC	2 cut(s)	957, 1164
HincII	GTYRAC	3 cut(s)	421, 1252, 1367
HindII	GTYRAC	3 cut(s)	421, 1252, 1367
HindIII	AAGCTT	2 cut(s)	438, 601
HinfI	GANTC	4 cut(s)	496, 911, 1169, 1516
HphI	GGTGA	5 cut(s)	120, 808, 853, 961, 1697
Hpy166II	GTNNAC	7 cut(s)	268, 421, 1024, 1087, 1252, 1338, 1367
Hpy188I	TCNGA	3 cut(s)	486, 1235, 1463
Hpy188III	TCNNGA	4 cut(s)	101, 493, 1154, 1424
Hpy8I	GTNNAC	7 cut(s)	268, 421, 1024, 1087, 1252, 1338, 1367
Hpy99I	CGWCG	2 cut(s)	751, 779
HpyAV	CCTTC	4 cut(s)	82, 1308, 1674, 1701
HpyCH4III	ACNGT	5 cut(s)	39, 265, 931, 1051, 1335
HpyCH4IV	ACGT	1 cut(s)	1006
HpyF10VI	GCNNNNNNNGC	4 cut(s)	340, 963, 1052, 1595
HpyF3I	CTNAG	8 cut(s)	526, 632, 986, 1068, 1120, 1167, 1430, 1590
HpySE526I	ACGT	1 cut(s)	1006
Hsp92I	GRCGYC	1 cut(s)	749
Hsp92II	CATG	8 cut(s)	300, 418, 496, 597, 691, 740, 938, 1523
HspAI	GCGC	2 cut(s)	957, 1164
Kzo9I	GATC	2 cut(s)	256, 486
LguI	GCTCTTC	1 cut(s)	1182
LmnI	GCTCC	3 cut(s)	722, 896, 1208
Lsp1109I	GCAGC	5 cut(s)	655, 768, 911, 1126, 1585
LweI	GCATC	3 cut(s)	94, 382, 1633
MaeI	CTAG	6 cut(s)	48, 1082, 1154, 1389, 1595, 1670
MaeII	ACGT	1 cut(s)	1006
MaeIII	GTNAC	5 cut(s)	126, 403, 768, 841, 862
MalI	GATC	2 cut(s)	258, 488
MbiI	CCGCTC	1 cut(s)	334
MboI	GATC	2 cut(s)	256, 486
MhlI	GDGCHC	2 cut(s)	255, 1205
MluCI	AATT	3 cut(s)	164, 372, 978
MlyI	GAGTC	1 cut(s)	1178
MroXI	GAANNNNTTC	1 cut(s)	500
MseI	TTAA	4 cut(s)	147, 977, 996, 1584
MspA1I	CMGCKG	1 cut(s)	281
MspCI	CTTAAG	1 cut(s)	1583
MspR9I	CCNGG	2 cut(s)	544, 1304
Mva1269I	GAATGC	4 cut(s)	188, 326, 1316, 1349
MvaI	CCWGG	2 cut(s)	544, 1304
MvnI	CGCG	1 cut(s)	1164
MwoI	GCNNNNNNNGC	4 cut(s)	340, 963, 1052, 1595
NdeII	GATC	2 cut(s)	256, 486
NheI	GCTAGC	1 cut(s)	1594
NlaIII	CATG	8 cut(s)	300, 418, 496, 597, 691, 740, 938, 1523
NmeAIII	GCCGAG	1 cut(s)	1171
NmuCI	GTSAC	4 cut(s)	126, 768, 841, 862
NspI	RCATGY	2 cut(s)	300, 938
PagI	TCATGA	1 cut(s)	492
PciI	ACATGT	2 cut(s)	296, 934
PciSI	GCTCTTC	1 cut(s)	1182
PcsI	WCGNNNNNNNCGW	1 cut(s)	261
PctI	GAATGC	4 cut(s)	188, 326, 1316, 1349
PdmI	GAANNNNTTC	1 cut(s)	500
PfeI	GAWTC	3 cut(s)	496, 911, 1516
PflFI	GACNNNGTC	1 cut(s)	124
PfoI	TCCNGGA	1 cut(s)	542
PkrI	GCNGC	8 cut(s)	645, 681, 783, 901, 1116, 1163, 1225, 1600
PleI	GAGTC	1 cut(s)	1177
PpsI	GAGTC	1 cut(s)	1177
PscI	ACATGT	2 cut(s)	296, 934
PsiI	TTATAA	2 cut(s)	761, 878
Psp124BI	GAGCTC	1 cut(s)	1205
Psp6I	CCWGG	2 cut(s)	542, 1302
PspGI	CCWGG	2 cut(s)	542, 1302
PsyI	GACNNNGTC	1 cut(s)	124
PvuII	CAGCTG	1 cut(s)	281
RsaI	GTAC	4 cut(s)	41, 267, 383, 933
RsaNI	GTAC	4 cut(s)	40, 266, 382, 932
SacI	GAGCTC	1 cut(s)	1205
SalI	GTCGAC	3 cut(s)	419, 1250, 1365
SapI	GCTCTTC	1 cut(s)	1182
SaqAI	TTAA	4 cut(s)	147, 977, 996, 1584
SatI	GCNGC	8 cut(s)	644, 680, 782, 900, 1115, 1162, 1224, 1599
Sau3AI	GATC	2 cut(s)	256, 486
ScaI	AGTACT	1 cut(s)	383
SchI	GAGTC	1 cut(s)	1178
ScrFI	CCNGG	2 cut(s)	544, 1304
SduI	GDGCHC	2 cut(s)	255, 1205
SfaNI	GCATC	3 cut(s)	94, 382, 1633
SmlI	CTYRAG	3 cut(s)	1451, 1471, 1583
SmoI	CTYRAG	3 cut(s)	1451, 1471, 1583
Sse9I	AATT	3 cut(s)	164, 372, 978
SsiI	CCGC	5 cut(s)	332, 680, 1162, 1224, 1601
SspI	AATATT	2 cut(s)	590, 715
SspMI	CTAG	6 cut(s)	48, 1082, 1154, 1389, 1595, 1670
SstI	GAGCTC	1 cut(s)	1205
StyD4I	CCNGG	2 cut(s)	542, 1302
StyI	CCWWGG	2 cut(s)	1062, 1398
TaaI	ACNGT	5 cut(s)	39, 265, 931, 1051, 1335
TaiI	ACGT	1 cut(s)	1009
TaqI	TCGA	6 cut(s)	255, 420, 777, 1251, 1366, 1423
TasI	AATT	3 cut(s)	164, 372, 978
TatI	WGTACW	3 cut(s)	39, 381, 931
TauI	GCSGC	3 cut(s)	682, 1164, 1226
TfiI	GAWTC	3 cut(s)	496, 911, 1516
Tru1I	TTAA	4 cut(s)	147, 977, 996, 1584
Tru9I	TTAA	4 cut(s)	147, 977, 996, 1584
TscAI	CASTG	1 cut(s)	867
TseFI	GTSAC	4 cut(s)	126, 768, 841, 862
TseI	GCWGC	5 cut(s)	643, 781, 899, 1114, 1598
Tsp45I	GTSAC	4 cut(s)	126, 768, 841, 862
TspRI	CASTG	1 cut(s)	867
Tth111I	GACNNNGTC	1 cut(s)	124
Vha464I	CTTAAG	1 cut(s)	1583
XbaI	TCTAGA	1 cut(s)	1153
XceI	RCATGY	2 cut(s)	300, 938
XcmI	CCANNNNNNNNNTGG	1 cut(s)	623
XmiI	GTMKAC	3 cut(s)	420, 1251, 1366
XmnI	GAANNNNTTC	1 cut(s)	500
XspI	CTAG	6 cut(s)	48, 1082, 1154, 1389, 1595, 1670
ZrmI	AGTACT	1 cut(s)	383

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.