Rorug05G0153200

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000336
Physical Location & Seq
Reverse (-)
14216011 .. 14222350
6340 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0153200.1

Sequence Viewer

Length: 1467 bp
ATGAGGGAGCCAGTGAACGACGTGTCGCCGACGCCACCTCCTCCTCCGCCCCAGGCGTTGCTCGAGAGGCTCAAGGATTACGGCCAGGAAGACGCCTTCGCCCTCTGGGACGAGCTCTCCCCCGACGAGCGTCAGCTTCTCGTCAAGGACATCGAGAGCTTGGATCTTTCGAGAATCGATCGGATCATTCGGTGTTCGCTTCGATCTCACGGGCTGCCGACGGCGGCGATTGAGCCGGTGCCGGAGAGCAGTGTGTCGAGTGTGGAGGAGCGGAGTCTTGAAGACCGAGAGAGATGGTGGAAGATGGGATTGAAAGCAATCCACGACGGAAAGTTGGCCGTCTTGCTCTTATCCGGTGGACAGGGAACTCGACTTGGAAGTTCAGACCCAAAGGGATGTTTCAATATCGGGCTTCCATCTGGAAAGTCACTCTTTCAACTTCAAGCTGAGCGGATTTTGTGTGTTCAGAGACTAGCTGCTCAGTCTACAAATGATGGTTCTGCTGCACCACTGCAAATACATTGGTATATTATGACCAGTCCATTTACTGATGAAGCCACAAGAAAATTTTTTGAAAGTCATAAATACTTTGGTCTTGAAGCTGATCAGGTTACCTTCTTTCAGCAAGGCACCATACCTTGTGTTTCAGGGGATGGTAGATATATTATGGAAACTCCATACAGAGTAGCTAAGGCTCCAGATGGGAATGGAGGAGTATATTCAGCTTTGAAGTCTTCGAGATTATTAGAAGATATGGCTACGAGAGGCGTTAAGTATGTGGATTGCTATGGAGTTGACAATGCACTGGTTCGTGTAGCTGATCCAACTTTCTTGGGCTATTTCATTGATAAAGGTGTTGCATCCGCTGCAAAAGTTGTTCGCAAGGCTTATCCCCAAGAAAAGGTTGGTGTGTTTGTACGACGAGGAAAAGGTGGACCCCTTACTGTGGTGGAATACAGTGAGATGGATTCGTCTCTGTCTTCTGCAATCAATCAACAAACGGGACGTCTTCGTTTTTGTTGGAGTAATGTGTGCTTGCACATGTTCACACTGGATTTTCTAAACCAAGTAGCAAATGGCCTTGAGAAAGATAGCATTTACCATCTTGCCGAGAAGAAGATTCCTTCTATCCATGGACAGACAGTGGGATTTAAACTAGAGCAGTTTGTTTTTGATGCGTTTCCATATGCACCATCAACTGCACTTTTTGAGGTATTGCGTGAAGAAGAGTTTGCACCAGTAAAAAATGCAAACGGGTCAAATTTTGACACCCCAGACAGTGCGAGGCTTCTTGTTCTTCGACTGCACACTCGTTGGGTAGTCGCTGCTGGTGGATTCTTAACACATTCAGTGCCCTTATATGCAACCGGTGTGGAGGTGTCACCTCTTTGTTCTTATGCTGGAGAAAACCTAGAAGCAATTTGCCGTGGAAGAACGTTCCATGCCCCTTGTGAGATTTCATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

488

Amino Acids

53.98

Weight (kDa)

5.88

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGP PF01704 61 - 441 4.4e-41 UTP--glucose-1-phosphate uridylyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000336)

Species Orthologous Gene IDs
malus_domestica MD05G1024100.v1.1
rosa_chinensis RchiOBHm_Chr2g0152291 RchiOBHm_Chr4g0387411
rosa_laevigata RLG00000009698 RLG00000009699 RLG00000009700 RLG00000023615 RLG00000024265 RLG00000034445 RLG00000036567
rosa_multiflora Rmu_co8268067.1_g000001 Rmu_co8313555.1_g000001 Rmu_co8324697.1_g000001 Rmu_sc0000318.1_g000023 Rmu_sc0000342.1_g000016 Rmu_sc0000447.1_g000010 Rmu_sc0000528.1_g000009 Rmu_sc0000539.1_g000060 Rmu_sc0000929.1_g000023 Rmu_sc0001493.1_g000081 Rmu_sc0001674.1_g000003 Rmu_sc0001791.1_g000023 Rmu_sc0001822.1_g000005 Rmu_sc0001822.1_g000033 Rmu_sc0002061.1_g000010 Rmu_sc0002286.1_g000012 Rmu_sc0002979.1_g000009 Rmu_sc0003158.1_g000016 Rmu_sc0003221.1_g000001 Rmu_sc0003641.1_g000029 Rmu_sc0003742.1_g000012 Rmu_sc0003814.1_g000004 Rmu_sc0003823.1_g000005 Rmu_sc0004002.1_g000005 Rmu_sc0004564.1_g000005 Rmu_sc0005415.1_g000003 Rmu_sc0006050.1_g000025 Rmu_sc0006555.1_g000002 Rmu_sc0009954.1_g000020 Rmu_sc0010421.1_g000007 Rmu_sc0010607.1_g000002 Rmu_sc0011044.1_g000005 Rmu_sc0011497.1_g000015 Rmu_sc0014532.1_g000004 Rmu_sc0014745.1_g000005 Rmu_sc0014821.1_g000001 Rmu_sc0015038.1_g000002 Rmu_sc0015454.1_g000004 Rmu_sc0019663.1_g000002 Rmu_sc0027475.1_g000003 Rmu_sc0028826.1_g000002 Rmu_ssc0000117.1_g000019 Rmu_ssc0000175.1_g000034
rosa_roxburghii Rroxscaffold_3G00237080 Rroxscaffold_4G00288290 Rroxscaffold_6G00397510
rosa_rugosa Rorug01G0035000 Rorug01G0190900 Rorug01G0208500 Rorug01G0208600 Rorug01G0208600 Rorug01G0344900 Rorug01G0479500 Rorug01G0479600 Rorug02G0230400 Rorug02G0320900 Rorug02G0433300 Rorug03G0147400 Rorug03G0169700.1 Rorug03G0169800 Rorug03G0198300 Rorug04G0022900 Rorug04G0064600 Rorug04G0322100 Rorug04G0388900 Rorug05G0153200 Rorug05G0231600 Rorug05G0231700 Rorug05G0231800 Rorug05G0276200 Rorug05G0292400 Rorug05G0314700 Rorug06G0092000 Rorug06G0260900 Rorug06G0273600 RorugPtG0003200
rosa_samantha Rh1AG264100 Rh1AG292500 Rh1AG423800 Rh2AG098000 Rh2AG232700 Rh2AG361100 Rh2AG372900 Rh2BG099200 Rh2BG246000 Rh2BG260600 Rh2BG378400 Rh3BG142300 Rh3BG252900 Rh3BG267700 Rh3DG302400 Rh5BG059800 Rh5BG320000 Rh5BG530500 Rh6AG089300 Rh6AG089400 Rh6AG127400 Rh6AG376700 Rh7CG488700 Rh7DG265900
rosa_wichuraiana Rw2G040640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1009
AccB1I GGYRCC 2 cut(s) 238, 629
AccBSI CCGCTC 2 cut(s) 271, 451
AccI GTMKAC 1 cut(s) 485
AciI CCGC 5 cut(s) 47, 224, 271, 451, 864
AclI AACGTT 1 cut(s) 1436
AclWI GGATC 3 cut(s) 171, 191, 815
AcoI YGGCCR 2 cut(s) 82, 336
AcsI RAATTY 2 cut(s) 566, 1261
AcyI GRCGYC 3 cut(s) 32, 93, 1006
AfaI GTAC 1 cut(s) 918
AfiI CCNNNNNNNGG 2 cut(s) 901, 946
AflIII ACRYGT 2 cut(s) 21, 1041
AgeI ACCGGT 1 cut(s) 1367
AgsI TTSAA 8 cut(s) 281, 313, 403, 437, 443, 575, 599, 730
AjiI CACGTC 1 cut(s) 22
AjnI CCWGG 2 cut(s) 51, 84
AluBI AGCT 9 cut(s) 115, 136, 159, 446, 476, 602, 689, 725, 818
AluI AGCT 9 cut(s) 115, 136, 159, 446, 476, 602, 689, 725, 818
Alw21I GWGCWC 1 cut(s) 117
Alw26I GTCTC 2 cut(s) 463, 978
AlwI GGATC 3 cut(s) 171, 191, 815
Ama87I CYCGRG 1 cut(s) 62
AoxI GGCC 3 cut(s) 82, 336, 1078
ApeKI GCWGC 5 cut(s) 214, 476, 503, 866, 1325
ApoI RAATTY 2 cut(s) 566, 1261
ArsI GACNNNNNNTTYG 2 cut(s) 991, 1023
AsiGI ACCGGT 1 cut(s) 1367
AspS9I GGNCC 1 cut(s) 935
AsuHPI GGTGA 1 cut(s) 1374
AvaI CYCGRG 1 cut(s) 62
AvaII GGWCC 1 cut(s) 935
BaeGI GKGCMC 1 cut(s) 1356
BanI GGYRCC 2 cut(s) 238, 629
BanII GRGCYC 1 cut(s) 117
BbsI GAAGAC 5 cut(s) 96, 288, 726, 972, 1001
Bbv12I GWGCWC 1 cut(s) 117
BbvI GCAGC 5 cut(s) 201, 463, 490, 853, 1312
BccI CCATC 9 cut(s) 288, 298, 424, 488, 647, 695, 958, 1110, 1201
BceAI ACGGC 4 cut(s) 97, 237, 323, 1410
BciT130I CCWGG 2 cut(s) 53, 86
BclI TGATCA 1 cut(s) 604
BcoDI GTCTC 2 cut(s) 463, 978
BfaI CTAG 3 cut(s) 473, 1157, 1412
BisI GCNGC 6 cut(s) 215, 225, 477, 504, 867, 1326
BlpI GCTNAGC 1 cut(s) 447
BlsI GCNGC 6 cut(s) 216, 226, 478, 505, 868, 1327
Bme1390I CCNGG 2 cut(s) 53, 86
Bme18I GGWCC 1 cut(s) 935
BmeT110I CYCGRG 1 cut(s) 62
BmgBI CACGTC 1 cut(s) 22
BmgT120I GGNCC 1 cut(s) 935
BmiI GGNNCC 5 cut(s) 9, 240, 631, 696, 937
BmrFI CCNGG 2 cut(s) 53, 86
BmsI GCATC 2 cut(s) 869, 1165
BoxI GACNNNNGTC 1 cut(s) 129
BpiI GAAGAC 5 cut(s) 96, 288, 726, 972, 1001
BpmI CTGGAG 2 cut(s) 681, 1422
Bpu10I CCTNAGC 1 cut(s) 690
Bpu1102I GCTNAGC 1 cut(s) 447
BpuEI CTTGAG 2 cut(s) 56, 1103
Bsa29I ATCGAT 1 cut(s) 177
BsaHI GRCGYC 3 cut(s) 32, 93, 1006
BsaJI CCNNGG 3 cut(s) 51, 1132, 1426
BsaWI WCCGGW 2 cut(s) 353, 1367
BsaXI ACNNNNNCTCC 4 cut(s) 22, 52, 101, 131
Bsc4I CCNNNNNNNGG 2 cut(s) 901, 946
Bse118I RCCGGY 2 cut(s) 235, 1367
Bse1I ACTGG 5 cut(s) 11, 537, 810, 1056, 1238
BseBI CCWGG 2 cut(s) 53, 86
BseCI ATCGAT 1 cut(s) 177
BseDI CCNNGG 3 cut(s) 51, 1132, 1426
BseGI GGATG 3 cut(s) 401, 658, 860
BseLI CCNNNNNNNGG 2 cut(s) 901, 946
BseMII CTCAG 2 cut(s) 438, 494
BseNI ACTGG 5 cut(s) 11, 537, 810, 1056, 1238
BseRI GAGGAG 4 cut(s) 30, 33, 281, 726
BseSI GKGCMC 1 cut(s) 1356
BseXI GCAGC 5 cut(s) 201, 463, 490, 853, 1312
BsgI GTGCAG 3 cut(s) 489, 1185, 1289
Bsh1285I CGRYCG 1 cut(s) 181
BshFI GGCC 3 cut(s) 84, 338, 1080
BshNI GGYRCC 2 cut(s) 238, 629
BshTI ACCGGT 1 cut(s) 1367
BshVI ATCGAT 1 cut(s) 177
BsiEI CGRYCG 1 cut(s) 181
BsiHKAI GWGCWC 1 cut(s) 117
BsiHKCI CYCGRG 1 cut(s) 62
BsiSI CCGG 4 cut(s) 236, 242, 354, 1368
BslFI GGGAC 2 cut(s) 122, 1017
BslI CCNNNNNNNGG 2 cut(s) 901, 946
BsmAI GTCTC 2 cut(s) 463, 978
BsmBI CGTCTC 1 cut(s) 978
BsmFI GGGAC 2 cut(s) 122, 1017
BsnI GGCC 3 cut(s) 84, 338, 1080
BsoBI CYCGRG 1 cut(s) 62
Bsp1286I GDGCHC 2 cut(s) 117, 1356
Bsp143I GATC 6 cut(s) 163, 178, 183, 203, 604, 820
Bsp1720I GCTNAGC 1 cut(s) 447
Bsp19I CCATGG 1 cut(s) 1132
BspACI CCGC 5 cut(s) 47, 224, 271, 451, 864
BspANI GGCC 3 cut(s) 84, 338, 1080
BspCNI CTCAG 2 cut(s) 439, 493
BspDI ATCGAT 1 cut(s) 177
BspLI GGNNCC 5 cut(s) 9, 240, 631, 696, 937
BspPI GGATC 3 cut(s) 171, 191, 815
BspT107I GGYRCC 2 cut(s) 238, 629
BsrBI CCGCTC 2 cut(s) 271, 451
BsrFI RCCGGY 2 cut(s) 235, 1367
BsrI ACTGG 5 cut(s) 11, 537, 810, 1056, 1238
BssAI RCCGGY 2 cut(s) 235, 1367
BssECI CCNNGG 3 cut(s) 51, 1132, 1426
BssMI GATC 6 cut(s) 163, 178, 183, 203, 604, 820
BssNI GRCGYC 3 cut(s) 32, 93, 1006
BssT1I CCWWGG 1 cut(s) 1132
Bst2UI CCWGG 2 cut(s) 53, 86
Bst4CI ACNGT 4 cut(s) 946, 959, 1144, 1280
Bst6I CTCTTC 1 cut(s) 1221
BstACI GRCGYC 3 cut(s) 32, 93, 1006
BstAPI GCANNNNNTGC 1 cut(s) 866
BstC8I GCNNGC 1 cut(s) 1037
BstDEI CTNAG 3 cut(s) 447, 480, 690
BstDSI CCRYGG 2 cut(s) 1132, 1426
BstEII GGTNACC 1 cut(s) 610
BstF5I GGATG 3 cut(s) 401, 658, 860
BstKTI GATC 6 cut(s) 166, 181, 186, 206, 607, 823
BstMAI GTCTC 2 cut(s) 463, 978
BstMBI GATC 6 cut(s) 163, 178, 183, 203, 604, 820
BstMCI CGRYCG 1 cut(s) 181
BstMWI GCNNNNNNNGC 2 cut(s) 67, 866
BstNI CCWGG 2 cut(s) 53, 86
BstNSI RCATGY 1 cut(s) 1045
BstPAI GACNNNNGTC 1 cut(s) 129
BstPI GGTNACC 1 cut(s) 610
BstSCI CCNGG 2 cut(s) 51, 84
BstSLI GKGCMC 1 cut(s) 1356
BstV1I GCAGC 5 cut(s) 201, 463, 490, 853, 1312
BstV2I GAAGAC 5 cut(s) 96, 288, 726, 972, 1001
BstX2I RGATCY 1 cut(s) 163
BstYI RGATCY 1 cut(s) 163
Bsu15I ATCGAT 1 cut(s) 177
BsuRI GGCC 3 cut(s) 84, 338, 1080
BsuTUI ATCGAT 1 cut(s) 177
BtgI CCRYGG 2 cut(s) 1132, 1426
BtrI CACGTC 1 cut(s) 22
BtsCI GGATG 3 cut(s) 401, 658, 860
BtsI GCAGTG 2 cut(s) 256, 509
BtsIMutI CAGTG 9 cut(s) 18, 256, 509, 803, 964, 1049, 1149, 1285, 1356
Cac8I GCNNGC 1 cut(s) 1037
Cfr10I RCCGGY 2 cut(s) 235, 1367
Cfr13I GGNCC 1 cut(s) 935
ClaI ATCGAT 1 cut(s) 177
CseI GACGC 3 cut(s) 40, 101, 119
Csp6I GTAC 1 cut(s) 917
CspAI ACCGGT 1 cut(s) 1367
CspCI CAANNNNNGTGG 2 cut(s) 1353, 1388
CviAII CATG 3 cut(s) 1042, 1133, 1442
CviQI GTAC 1 cut(s) 917
DdeI CTNAG 3 cut(s) 447, 480, 690
DpnI GATC 6 cut(s) 165, 180, 185, 205, 606, 822
DpnII GATC 6 cut(s) 163, 178, 183, 203, 604, 820
DraI TTTAAA 1 cut(s) 1153
EaeI YGGCCR 2 cut(s) 82, 336
Eam1104I CTCTTC 1 cut(s) 1221
EarI CTCTTC 1 cut(s) 1221
EciI GGCGGA 1 cut(s) 36
Ecl136II GAGCTC 1 cut(s) 115
Eco130I CCWWGG 1 cut(s) 1132
Eco24I GRGCYC 1 cut(s) 117
Eco47I GGWCC 1 cut(s) 935
Eco53kI GAGCTC 1 cut(s) 115
Eco88I CYCGRG 1 cut(s) 62
Eco91I GGTNACC 1 cut(s) 610
EcoICRI GAGCTC 1 cut(s) 115
EcoO65I GGTNACC 1 cut(s) 610
EcoRII CCWGG 2 cut(s) 51, 84
EcoT14I CCWWGG 1 cut(s) 1132
EcoT38I GRGCYC 1 cut(s) 117
ErhI CCWWGG 1 cut(s) 1132
Esp3I CGTCTC 1 cut(s) 978
FaeI CATG 3 cut(s) 1045, 1136, 1445
FalI AAGNNNNNCTT 2 cut(s) 416, 448
FaqI GGGAC 2 cut(s) 122, 1017
FatI CATG 3 cut(s) 1041, 1132, 1441
FauNDI CATATG 1 cut(s) 1186
FbaI TGATCA 1 cut(s) 604
FblI GTMKAC 1 cut(s) 485
Fnu4HI GCNGC 6 cut(s) 215, 225, 477, 504, 867, 1326
FokI GGATG 3 cut(s) 408, 665, 847
FriOI GRGCYC 1 cut(s) 117
Fsp4HI GCNGC 6 cut(s) 215, 225, 477, 504, 867, 1326
FspBI CTAG 3 cut(s) 473, 1157, 1412
GluI GCNGC 6 cut(s) 215, 225, 477, 504, 867, 1326
GsuI CTGGAG 2 cut(s) 681, 1422
HaeIII GGCC 3 cut(s) 84, 338, 1080
HapII CCGG 4 cut(s) 236, 242, 354, 1368
HgaI GACGC 3 cut(s) 40, 101, 119
Hin1I GRCGYC 3 cut(s) 32, 93, 1006
Hin1II CATG 3 cut(s) 1045, 1136, 1445
HincII GTYRAC 1 cut(s) 796
HindII GTYRAC 1 cut(s) 796
HinfI GANTC 5 cut(s) 174, 274, 968, 1120, 1335
HpaII CCGG 4 cut(s) 236, 242, 354, 1368
HphI GGTGA 1 cut(s) 1374
Hpy166II GTNNAC 6 cut(s) 16, 359, 486, 796, 935, 1047
Hpy188I TCNGA 3 cut(s) 183, 385, 468
Hpy188III TCNNGA 8 cut(s) 64, 154, 171, 278, 420, 596, 698, 738
Hpy8I GTNNAC 6 cut(s) 16, 359, 486, 796, 935, 1047
Hpy99I CGWCG 6 cut(s) 23, 34, 128, 223, 329, 924
HpyAV CCTTC 3 cut(s) 106, 625, 1134
HpyCH4III ACNGT 4 cut(s) 946, 959, 1144, 1280
HpyCH4IV ACGT 3 cut(s) 21, 1006, 1436
HpyF10VI GCNNNNNNNGC 2 cut(s) 67, 866
HpyF3I CTNAG 3 cut(s) 447, 480, 690
HpySE526I ACGT 3 cut(s) 21, 1006, 1436
Hsp92I GRCGYC 3 cut(s) 32, 93, 1006
Hsp92II CATG 3 cut(s) 1045, 1136, 1445
Ksp22I TGATCA 1 cut(s) 604
Kzo9I GATC 6 cut(s) 163, 178, 183, 203, 604, 820
LmnI GCTCC 3 cut(s) 7, 268, 700
Lsp1109I GCAGC 5 cut(s) 201, 463, 490, 853, 1312
LweI GCATC 2 cut(s) 869, 1165
MaeI CTAG 3 cut(s) 473, 1157, 1412
MaeII ACGT 3 cut(s) 21, 1006, 1436
MaeIII GTNAC 3 cut(s) 426, 610, 1380
MalI GATC 6 cut(s) 165, 180, 185, 205, 606, 822
MbiI CCGCTC 2 cut(s) 271, 451
MboI GATC 6 cut(s) 163, 178, 183, 203, 604, 820
MflI RGATCY 1 cut(s) 163
MhlI GDGCHC 2 cut(s) 117, 1356
MluCI AATT 3 cut(s) 566, 1261, 1419
MlyI GAGTC 1 cut(s) 283
MmeI TCCRAC 2 cut(s) 848, 1001
MseI TTAA 3 cut(s) 771, 1152, 1340
MspA1I CMGCKG 1 cut(s) 866
MspI CCGG 4 cut(s) 236, 242, 354, 1368
MspR9I CCNGG 2 cut(s) 53, 86
MvaI CCWGG 2 cut(s) 53, 86
MwoI GCNNNNNNNGC 2 cut(s) 67, 866
NcoI CCATGG 1 cut(s) 1132
NdeI CATATG 1 cut(s) 1186
NdeII GATC 6 cut(s) 163, 178, 183, 203, 604, 820
NlaIII CATG 3 cut(s) 1045, 1136, 1445
NlaIV GGNNCC 5 cut(s) 9, 240, 631, 696, 937
NmeAIII GCCGAG 1 cut(s) 1135
NmuCI GTSAC 2 cut(s) 426, 1380
NspI RCATGY 1 cut(s) 1045
PaeR7I CTCGAG 1 cut(s) 62
PciI ACATGT 1 cut(s) 1041
PfeI GAWTC 4 cut(s) 174, 968, 1120, 1335
PinAI ACCGGT 1 cut(s) 1367
PkrI GCNGC 6 cut(s) 216, 226, 478, 505, 868, 1327
Ple19I CGATCG 1 cut(s) 181
PleI GAGTC 1 cut(s) 282
PpsI GAGTC 1 cut(s) 282
PscI ACATGT 1 cut(s) 1041
PshAI GACNNNNGTC 1 cut(s) 129
Psp124BI GAGCTC 1 cut(s) 117
Psp1406I AACGTT 1 cut(s) 1436
Psp6I CCWGG 2 cut(s) 51, 84
PspEI GGTNACC 1 cut(s) 610
PspGI CCWGG 2 cut(s) 51, 84
PspN4I GGNNCC 5 cut(s) 9, 240, 631, 696, 937
PspPI GGNCC 1 cut(s) 935
PsuI RGATCY 1 cut(s) 163
PvuI CGATCG 1 cut(s) 181
RsaI GTAC 1 cut(s) 918
RsaNI GTAC 1 cut(s) 917
SacI GAGCTC 1 cut(s) 117
SaqAI TTAA 3 cut(s) 771, 1152, 1340
SatI GCNGC 6 cut(s) 215, 225, 477, 504, 867, 1326
Sau3AI GATC 6 cut(s) 163, 178, 183, 203, 604, 820
Sau96I GGNCC 1 cut(s) 935
SchI GAGTC 1 cut(s) 283
ScrFI CCNGG 2 cut(s) 53, 86
SduI GDGCHC 2 cut(s) 117, 1356
SfaNI GCATC 2 cut(s) 869, 1165
Sfr274I CTCGAG 1 cut(s) 62
SinI GGWCC 1 cut(s) 935
SlaI CTCGAG 1 cut(s) 62
SmlI CTYRAG 3 cut(s) 62, 71, 1082
SmoI CTYRAG 3 cut(s) 62, 71, 1082
Sse9I AATT 3 cut(s) 566, 1261, 1419
SsiI CCGC 5 cut(s) 47, 224, 271, 451, 864
SspMI CTAG 3 cut(s) 473, 1157, 1412
SstI GAGCTC 1 cut(s) 117
StyD4I CCNGG 2 cut(s) 51, 84
StyI CCWWGG 1 cut(s) 1132
TaaI ACNGT 4 cut(s) 946, 959, 1144, 1280
TaiI ACGT 3 cut(s) 24, 1009, 1439
TaqI TCGA 9 cut(s) 63, 153, 170, 177, 202, 257, 370, 737, 1300
TaqII GACCGA 1 cut(s) 300
TasI AATT 3 cut(s) 566, 1261, 1419
TauI GCSGC 1 cut(s) 227
TfiI GAWTC 4 cut(s) 174, 968, 1120, 1335
Tru1I TTAA 3 cut(s) 771, 1152, 1340
Tru9I TTAA 3 cut(s) 771, 1152, 1340
TscAI CASTG 9 cut(s) 18, 256, 516, 810, 964, 1056, 1149, 1285, 1356
TseFI GTSAC 2 cut(s) 426, 1380
TseI GCWGC 5 cut(s) 214, 476, 503, 866, 1325
Tsp45I GTSAC 2 cut(s) 426, 1380
TspDTI ATGAA 3 cut(s) 567, 832, 1449
TspGWI ACGGA 1 cut(s) 342
TspRI CASTG 9 cut(s) 18, 256, 516, 810, 964, 1056, 1149, 1285, 1356
VpaK11BI GGWCC 1 cut(s) 935
XapI RAATTY 2 cut(s) 566, 1261
XceI RCATGY 1 cut(s) 1045
XcmI CCANNNNNNNNNTGG 2 cut(s) 902, 1073
XhoI CTCGAG 1 cut(s) 62
XmiI GTMKAC 1 cut(s) 485
XspI CTAG 3 cut(s) 473, 1157, 1412
ZraI GACGTC 1 cut(s) 1007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.