Rmu_sc0009954.1_g000020

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009954.1
OG0000336
Physical Location & Seq
Reverse (-)
70498 .. 71860
1363 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009954.1_g000020.1.cds

Sequence Viewer

Length: 1302 bp
atggaggatgtcgacgagattgcagtgcgcctggctgcatccttgggattggcggatgcacgccggccggtagacctgcgaccttctcgtggtgaaggactacatcgatcacagacgtaccttgtggggaaacttctaatagccagagcgttcaacaagagatcctttatggggatgttccggcgagcatggcggctgaatggtcaatacaccgtccaggagcatgatgaccgttttctcttcaccttgttgaacccaactgatcgtaaccggcttctccggggtggtccgtggggttttgatagggctccggtggttttggcaccatatgatggagttggagctatcaaagatgtgtcgcttaatacacttgctttctggatcaaggtgcgtggactaccgccggattttcatactgatcgctgtcttaggaggataaggagtgccataggtcggtttgttcagaaggacaccacagagtttgctgcaggacgaatccggattcgggttgagatggacctgctgcagcctatcatctttcgacgtagcttcacgattgatgatggtattgtggtggatttggatttcttctttgaaaatttgtatgggtggtgcaaggattgtggacctgtcactcatgttggcttaccgtgctcgaaaactcctttgtcggcagagctgcaaactgatactcctttagcacgtcgaaatctggagcgggctttgaaccaagttgggttagagaggtttatgctgactgttaaacctaaagtgaggaaagaaatacgtcggaggccttctgttggcagtggagatggtagctctggggtgcagacagactcaaatgtgacggagcttgctggtggtagtgagcctaagtctgatggctcaggtaaggggacatttggagcaagcaattcagatcatgcaccgaatcctgcaatgcattctcctggttgtggactgtgtcgtaagcgtgtggatgaggatgggatttctccaaagaaaatgagattgagcttggcagttggaagaactaatctagatgctatgaccatgggttggtgcaatgtgaagccggctgagcaggtatacaagaagagaggtaagccgaaaggtgcaaaaaacaaaacaaaggagttcaaggtggttcaggcttctcctatgaaaaagtctccatcgaagaagagtaagtctccacgaaaagtggaaaagttggtgaatggtttgctggaatttactttagttgaggttgtcaatggttctaacccgcctaatgggaaggaacctatagttgcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

433

Amino Acids

48.04

Weight (kDa)

9.99

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000336)

Species Orthologous Gene IDs
malus_domestica MD05G1024100.v1.1
rosa_chinensis RchiOBHm_Chr2g0152291 RchiOBHm_Chr4g0387411
rosa_laevigata RLG00000009698 RLG00000009699 RLG00000009700 RLG00000023615 RLG00000024265 RLG00000034445 RLG00000036567
rosa_multiflora Rmu_co8268067.1_g000001 Rmu_co8313555.1_g000001 Rmu_co8324697.1_g000001 Rmu_sc0000318.1_g000023 Rmu_sc0000342.1_g000016 Rmu_sc0000447.1_g000010 Rmu_sc0000528.1_g000009 Rmu_sc0000539.1_g000060 Rmu_sc0000929.1_g000023 Rmu_sc0001493.1_g000081 Rmu_sc0001674.1_g000003 Rmu_sc0001791.1_g000023 Rmu_sc0001822.1_g000005 Rmu_sc0001822.1_g000033 Rmu_sc0002061.1_g000010 Rmu_sc0002286.1_g000012 Rmu_sc0002979.1_g000009 Rmu_sc0003158.1_g000016 Rmu_sc0003221.1_g000001 Rmu_sc0003641.1_g000029 Rmu_sc0003742.1_g000012 Rmu_sc0003814.1_g000004 Rmu_sc0003823.1_g000005 Rmu_sc0004002.1_g000005 Rmu_sc0004564.1_g000005 Rmu_sc0005415.1_g000003 Rmu_sc0006050.1_g000025 Rmu_sc0006555.1_g000002 Rmu_sc0009954.1_g000020 Rmu_sc0010421.1_g000007 Rmu_sc0010607.1_g000002 Rmu_sc0011044.1_g000005 Rmu_sc0011497.1_g000015 Rmu_sc0014532.1_g000004 Rmu_sc0014745.1_g000005 Rmu_sc0014821.1_g000001 Rmu_sc0015038.1_g000002 Rmu_sc0015454.1_g000004 Rmu_sc0019663.1_g000002 Rmu_sc0027475.1_g000003 Rmu_sc0028826.1_g000002 Rmu_ssc0000117.1_g000019 Rmu_ssc0000175.1_g000034
rosa_roxburghii Rroxscaffold_3G00237080 Rroxscaffold_4G00288290 Rroxscaffold_6G00397510
rosa_rugosa Rorug01G0035000 Rorug01G0190900 Rorug01G0208500 Rorug01G0208600 Rorug01G0208600 Rorug01G0344900 Rorug01G0479500 Rorug01G0479600 Rorug02G0230400 Rorug02G0320900 Rorug02G0433300 Rorug03G0147400 Rorug03G0169700.1 Rorug03G0169800 Rorug03G0198300 Rorug04G0022900 Rorug04G0064600 Rorug04G0322100 Rorug04G0388900 Rorug05G0153200 Rorug05G0231600 Rorug05G0231700 Rorug05G0231800 Rorug05G0276200 Rorug05G0292400 Rorug05G0314700 Rorug06G0092000 Rorug06G0260900 Rorug06G0273600 RorugPtG0003200
rosa_samantha Rh1AG264100 Rh1AG292500 Rh1AG423800 Rh2AG098000 Rh2AG232700 Rh2AG361100 Rh2AG372900 Rh2BG099200 Rh2BG246000 Rh2BG260600 Rh2BG378400 Rh3BG142300 Rh3BG252900 Rh3BG267700 Rh3DG302400 Rh5BG059800 Rh5BG320000 Rh5BG530500 Rh6AG089300 Rh6AG089400 Rh6AG127400 Rh6AG376700 Rh7CG488700 Rh7DG265900
rosa_wichuraiana Rw2G040640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 84, 528, 1078
AccB1I GGYRCC 1 cut(s) 322
AccB7I CCANNNNNTGG 2 cut(s) 332, 1062
AccBSI CCGCTC 1 cut(s) 718
AccI GTMKAC 3 cut(s) 12, 72, 1092
AccIII TCCGGA 1 cut(s) 498
AciI CCGC 5 cut(s) 53, 193, 401, 718, 1271
AclWI GGATC 2 cut(s) 156, 389
AcoI YGGCCR 1 cut(s) 65
AcsI RAATTY 2 cut(s) 598, 1235
AfaI GTAC 1 cut(s) 119
AfiI CCNNNNNNNGG 9 cut(s) 89, 171, 332, 453, 505, 803, 959, 1062, 1277
AgsI TTSAA 5 cut(s) 154, 253, 596, 727, 1144
AjiI CACGTC 1 cut(s) 704
AjnI CCWGG 3 cut(s) 30, 216, 952
AluBI AGCT 6 cut(s) 344, 549, 679, 822, 856, 1020
AluI AGCT 6 cut(s) 344, 549, 679, 822, 856, 1020
Alw21I GWGCWC 1 cut(s) 656
Alw26I GTCTC 2 cut(s) 1179, 1200
AlwI GGATC 2 cut(s) 156, 389
Aor13HI TCCGGA 1 cut(s) 498
AoxI GGCC 2 cut(s) 65, 794
ApeKI GCWGC 5 cut(s) 35, 485, 523, 526, 679
ApoI RAATTY 2 cut(s) 598, 1235
AspLEI GCGC 1 cut(s) 30
AspS9I GGNCC 3 cut(s) 287, 517, 626
AsuC2I CCSGG 1 cut(s) 281
AsuHPI GGTGA 3 cut(s) 104, 235, 1231
AvaII GGWCC 3 cut(s) 287, 517, 626
BaeI ACNNNNGTAYC 2 cut(s) 101, 134
BanI GGYRCC 1 cut(s) 322
BanII GRGCYC 1 cut(s) 310
BauI CACGAG 1 cut(s) 87
Bbv12I GWGCWC 1 cut(s) 656
BbvI GCAGC 5 cut(s) 22, 472, 510, 538, 666
BccI CCATC 7 cut(s) 326, 508, 557, 809, 878, 983, 1186
BcgI CGANNNNNNTGC 1 cut(s) 36
BciT130I CCWGG 3 cut(s) 32, 218, 954
BcnI CCSGG 1 cut(s) 281
BcoDI GTCTC 2 cut(s) 1179, 1200
BfaI CTAG 1 cut(s) 1043
BfmI CTRYAG 3 cut(s) 486, 524, 1290
BfuAI ACCTGC 3 cut(s) 84, 528, 1078
BisI GCNGC 6 cut(s) 36, 194, 486, 524, 527, 680
BlpI GCTNAGC 1 cut(s) 1083
BlsI GCNGC 6 cut(s) 37, 195, 487, 525, 528, 681
Bme1390I CCNGG 4 cut(s) 32, 218, 281, 954
Bme18I GGWCC 3 cut(s) 287, 517, 626
BmgBI CACGTC 1 cut(s) 704
BmgT120I GGNCC 3 cut(s) 287, 517, 626
BmiI GGNNCC 3 cut(s) 309, 324, 1287
BmrFI CCNGG 4 cut(s) 32, 218, 281, 954
BmsI GCATC 3 cut(s) 46, 47, 1036
BplI GAGNNNNNCTC 2 cut(s) 1180, 1212
BpmI CTGGAG 1 cut(s) 734
Bpu10I CCTNAGC 1 cut(s) 889
Bpu1102I GCTNAGC 1 cut(s) 1083
BpuMI CCSGG 1 cut(s) 281
Bsa29I ATCGAT 1 cut(s) 106
BsaJI CCNNGG 4 cut(s) 42, 280, 290, 1056
BsaWI WCCGGW 2 cut(s) 310, 498
BsaXI ACNNNNNCTCC 2 cut(s) 676, 706
Bsc4I CCNNNNNNNGG 9 cut(s) 89, 171, 332, 453, 505, 803, 959, 1062, 1277
Bse118I RCCGGY 4 cut(s) 63, 67, 270, 1078
Bse3DI GCAATG 2 cut(s) 948, 1075
BseAI TCCGGA 1 cut(s) 498
BseBI CCWGG 3 cut(s) 32, 218, 954
BseCI ATCGAT 1 cut(s) 106
BseDI CCNNGG 4 cut(s) 42, 280, 290, 1056
BseGI GGATG 6 cut(s) 13, 38, 61, 180, 988, 994
BseLI CCNNNNNNNGG 9 cut(s) 89, 171, 332, 453, 505, 803, 959, 1062, 1277
BseMI GCAATG 2 cut(s) 948, 1075
BseMII CTCAG 2 cut(s) 903, 1074
BseX3I CGGCCG 1 cut(s) 65
BseXI GCAGC 5 cut(s) 22, 472, 510, 538, 666
BsgI GTGCAG 1 cut(s) 851
Bsh1285I CGRYCG 1 cut(s) 68
BshFI GGCC 2 cut(s) 67, 796
BshNI GGYRCC 1 cut(s) 322
BshVI ATCGAT 1 cut(s) 106
BsiEI CGRYCG 1 cut(s) 68
BsiHKAI GWGCWC 1 cut(s) 656
BsiSI CCGG 9 cut(s) 64, 68, 181, 271, 280, 311, 404, 499, 1079
BslFI GGGAC 1 cut(s) 913
BslI CCNNNNNNNGG 9 cut(s) 89, 171, 332, 453, 505, 803, 959, 1062, 1277
BsmAI GTCTC 2 cut(s) 1179, 1200
BsmFI GGGAC 1 cut(s) 913
BsmI GAATGC 1 cut(s) 946
BsnI GGCC 2 cut(s) 67, 796
Bsp1286I GDGCHC 2 cut(s) 310, 656
Bsp13I TCCGGA 1 cut(s) 498
Bsp143I GATC 6 cut(s) 107, 161, 262, 381, 418, 922
Bsp1720I GCTNAGC 1 cut(s) 1083
Bsp19I CCATGG 1 cut(s) 1056
BspACI CCGC 5 cut(s) 53, 193, 401, 718, 1271
BspANI GGCC 2 cut(s) 67, 796
BspCNI CTCAG 2 cut(s) 902, 1075
BspDI ATCGAT 1 cut(s) 106
BspEI TCCGGA 1 cut(s) 498
BspLI GGNNCC 3 cut(s) 309, 324, 1287
BspMAI CTGCAG 2 cut(s) 490, 528
BspMI ACCTGC 3 cut(s) 84, 528, 1078
BspPI GGATC 2 cut(s) 156, 389
BspT107I GGYRCC 1 cut(s) 322
BsrBI CCGCTC 1 cut(s) 718
BsrDI GCAATG 2 cut(s) 948, 1075
BsrFI RCCGGY 4 cut(s) 63, 67, 270, 1078
BssAI RCCGGY 4 cut(s) 63, 67, 270, 1078
BssECI CCNNGG 4 cut(s) 42, 280, 290, 1056
BssMI GATC 6 cut(s) 107, 161, 262, 381, 418, 922
BssNAI GTATAC 1 cut(s) 1093
BssSI CACGAG 1 cut(s) 87
BssT1I CCWWGG 2 cut(s) 42, 1056
Bst1107I GTATAC 1 cut(s) 1093
Bst2BI CACGAG 1 cut(s) 87
Bst2UI CCWGG 3 cut(s) 32, 218, 954
Bst4CI ACNGT 5 cut(s) 214, 233, 651, 760, 966
Bst6I CTCTTC 3 cut(s) 245, 1094, 1181
BstC8I GCNNGC 7 cut(s) 61, 65, 186, 720, 858, 913, 1080
BstDEI CTNAG 5 cut(s) 428, 876, 889, 1083, 1299
BstDSI CCRYGG 2 cut(s) 290, 1056
BstF5I GGATG 6 cut(s) 13, 38, 61, 180, 988, 994
BstHHI GCGC 1 cut(s) 30
BstKTI GATC 6 cut(s) 110, 164, 265, 384, 421, 925
BstMAI GTCTC 2 cut(s) 1179, 1200
BstMBI GATC 6 cut(s) 107, 161, 262, 381, 418, 922
BstMCI CGRYCG 1 cut(s) 68
BstMWI GCNNNNNNNGC 3 cut(s) 190, 651, 1084
BstNI CCWGG 3 cut(s) 32, 218, 954
BstSCI CCNGG 4 cut(s) 30, 216, 279, 952
BstSFI CTRYAG 3 cut(s) 486, 524, 1290
BstV1I GCAGC 5 cut(s) 22, 472, 510, 538, 666
BstX2I RGATCY 1 cut(s) 161
BstYI RGATCY 1 cut(s) 161
BstZ17I GTATAC 1 cut(s) 1093
BstZI CGGCCG 1 cut(s) 65
Bsu15I ATCGAT 1 cut(s) 106
BsuRI GGCC 2 cut(s) 67, 796
BsuTUI ATCGAT 1 cut(s) 106
BtgI CCRYGG 2 cut(s) 290, 1056
BtrI CACGTC 1 cut(s) 704
BtsCI GGATG 6 cut(s) 13, 38, 61, 180, 988, 994
BtsI GCAGTG 2 cut(s) 30, 814
BtsIMutI CAGTG 2 cut(s) 30, 814
BveI ACCTGC 3 cut(s) 84, 528, 1078
Cac8I GCNNGC 7 cut(s) 61, 65, 186, 720, 858, 913, 1080
CfoI GCGC 1 cut(s) 30
Cfr10I RCCGGY 4 cut(s) 63, 67, 270, 1078
Cfr13I GGNCC 3 cut(s) 287, 517, 626
ClaI ATCGAT 1 cut(s) 106
Csp6I GTAC 1 cut(s) 118
CspCI CAANNNNNGTGG 6 cut(s) 373, 408, 463, 498, 604, 639
CviAII CATG 5 cut(s) 189, 224, 638, 926, 1057
CviQI GTAC 1 cut(s) 118
DdeI CTNAG 5 cut(s) 428, 876, 889, 1083, 1299
DpnI GATC 6 cut(s) 109, 163, 264, 383, 420, 924
DpnII GATC 6 cut(s) 107, 161, 262, 381, 418, 922
EaeI YGGCCR 1 cut(s) 65
EagI CGGCCG 1 cut(s) 65
Eam1104I CTCTTC 3 cut(s) 245, 1094, 1181
EarI CTCTTC 3 cut(s) 245, 1094, 1181
EciI GGCGGA 1 cut(s) 68
EclXI CGGCCG 1 cut(s) 65
Eco130I CCWWGG 2 cut(s) 42, 1056
Eco147I AGGCCT 1 cut(s) 796
Eco24I GRGCYC 1 cut(s) 310
Eco47I GGWCC 3 cut(s) 287, 517, 626
Eco52I CGGCCG 1 cut(s) 65
EcoRII CCWGG 3 cut(s) 30, 216, 952
EcoT14I CCWWGG 2 cut(s) 42, 1056
EcoT22I ATGCAT 1 cut(s) 948
EcoT38I GRGCYC 1 cut(s) 310
ErhI CCWWGG 2 cut(s) 42, 1056
FaeI CATG 5 cut(s) 192, 227, 641, 929, 1060
FalI AAGNNNNNCTT 2 cut(s) 149, 181
FaqI GGGAC 1 cut(s) 913
FatI CATG 5 cut(s) 188, 223, 637, 925, 1056
FauI CCCGC 2 cut(s) 711, 1278
FauNDI CATATG 1 cut(s) 328
FblI GTMKAC 3 cut(s) 12, 72, 1092
Fnu4HI GCNGC 6 cut(s) 36, 194, 486, 524, 527, 680
FokI GGATG 6 cut(s) 20, 25, 68, 187, 995, 1001
FriOI GRGCYC 1 cut(s) 310
Fsp4HI GCNGC 6 cut(s) 36, 194, 486, 524, 527, 680
FspBI CTAG 1 cut(s) 1043
GlaI GCGC 1 cut(s) 29
GluI GCNGC 6 cut(s) 36, 194, 486, 524, 527, 680
GsuI CTGGAG 1 cut(s) 734
HaeIII GGCC 2 cut(s) 67, 796
HapII CCGG 9 cut(s) 64, 68, 181, 271, 280, 311, 404, 499, 1079
HhaI GCGC 1 cut(s) 30
Hin1II CATG 5 cut(s) 192, 227, 641, 929, 1060
Hin6I GCGC 1 cut(s) 28
HinP1I GCGC 1 cut(s) 28
HincII GTYRAC 1 cut(s) 13
HindII GTYRAC 1 cut(s) 13
HinfI GANTC 4 cut(s) 495, 502, 839, 934
HpaII CCGG 9 cut(s) 64, 68, 181, 271, 280, 311, 404, 499, 1079
HphI GGTGA 3 cut(s) 104, 235, 1231
Hpy166II GTNNAC 6 cut(s) 13, 73, 395, 626, 962, 1093
Hpy188I TCNGA 4 cut(s) 465, 792, 883, 922
Hpy188III TCNNGA 5 cut(s) 379, 499, 553, 713, 1043
Hpy8I GTNNAC 6 cut(s) 13, 73, 395, 626, 962, 1093
Hpy99I CGWCG 4 cut(s) 17, 546, 708, 792
HpyAV CCTTC 5 cut(s) 89, 93, 460, 807, 1276
HpyCH4III ACNGT 5 cut(s) 214, 233, 651, 760, 966
HpyCH4IV ACGT 4 cut(s) 116, 544, 703, 787
HpyF10VI GCNNNNNNNGC 3 cut(s) 190, 651, 1084
HpyF3I CTNAG 5 cut(s) 428, 876, 889, 1083, 1299
HpySE526I ACGT 4 cut(s) 116, 544, 703, 787
Hsp92II CATG 5 cut(s) 192, 227, 641, 929, 1060
HspAI GCGC 1 cut(s) 28
Kpn2I TCCGGA 1 cut(s) 498
KroI GCCGGC 2 cut(s) 63, 1078
KroNI GCCGGC 2 cut(s) 65, 1080
Kzo9I GATC 6 cut(s) 107, 161, 262, 381, 418, 922
LmnI GCTCC 6 cut(s) 220, 313, 341, 715, 853, 908
Lsp1109I GCAGC 5 cut(s) 22, 472, 510, 538, 666
LweI GCATC 3 cut(s) 46, 47, 1036
MaeI CTAG 1 cut(s) 1043
MaeII ACGT 4 cut(s) 116, 544, 703, 787
MaeIII GTNAC 3 cut(s) 266, 631, 847
MalI GATC 6 cut(s) 109, 163, 264, 383, 420, 924
MbiI CCGCTC 1 cut(s) 718
MboI GATC 6 cut(s) 107, 161, 262, 381, 418, 922
MboII GAAGA 6 cut(s) 232, 580, 1044, 1111, 1195, 1198
MflI RGATCY 1 cut(s) 161
MhlI GDGCHC 2 cut(s) 310, 656
MluCI AATT 3 cut(s) 598, 916, 1235
MlyI GAGTC 1 cut(s) 833
MmeI TCCRAC 3 cut(s) 319, 770, 1009
MnlI CCTC 7 cut(s) 426, 738, 768, 786, 979, 1097, 1243
Mph1103I ATGCAT 1 cut(s) 948
MroI TCCGGA 1 cut(s) 498
MroNI GCCGGC 2 cut(s) 63, 1078
MseI TTAA 2 cut(s) 363, 762
MspI CCGG 9 cut(s) 64, 68, 181, 271, 280, 311, 404, 499, 1079
MspR9I CCNGG 4 cut(s) 32, 218, 281, 954
Mva1269I GAATGC 1 cut(s) 946
MvaI CCWGG 3 cut(s) 32, 218, 954
MwoI GCNNNNNNNGC 3 cut(s) 190, 651, 1084
NaeI GCCGGC 2 cut(s) 65, 1080
NciI CCSGG 1 cut(s) 281
NcoI CCATGG 1 cut(s) 1056
NdeI CATATG 1 cut(s) 328
NdeII GATC 6 cut(s) 107, 161, 262, 381, 418, 922
NgoMIV GCCGGC 2 cut(s) 63, 1078
NlaIII CATG 5 cut(s) 192, 227, 641, 929, 1060
NlaIV GGNNCC 3 cut(s) 309, 324, 1287
NmuCI GTSAC 2 cut(s) 631, 847
NsiI ATGCAT 1 cut(s) 948
PceI AGGCCT 1 cut(s) 796
PctI GAATGC 1 cut(s) 946
PdiI GCCGGC 2 cut(s) 65, 1080
PfeI GAWTC 3 cut(s) 495, 502, 934
PflFI GACNNNGTC 1 cut(s) 966
PflMI CCANNNNNTGG 2 cut(s) 332, 1062
PfoI TCCNGGA 1 cut(s) 216
PkrI GCNGC 6 cut(s) 37, 195, 487, 525, 528, 681
PleI GAGTC 1 cut(s) 833
PpsI GAGTC 1 cut(s) 833
Psp6I CCWGG 3 cut(s) 30, 216, 952
PspGI CCWGG 3 cut(s) 30, 216, 952
PspN4I GGNNCC 3 cut(s) 309, 324, 1287
PspPI GGNCC 3 cut(s) 287, 517, 626
PstI CTGCAG 2 cut(s) 490, 528
PsuI RGATCY 1 cut(s) 161
PsyI GACNNNGTC 1 cut(s) 966
RsaI GTAC 1 cut(s) 119
RsaNI GTAC 1 cut(s) 118
SalI GTCGAC 1 cut(s) 11
SaqAI TTAA 2 cut(s) 363, 762
SatI GCNGC 6 cut(s) 36, 194, 486, 524, 527, 680
Sau3AI GATC 6 cut(s) 107, 161, 262, 381, 418, 922
Sau96I GGNCC 3 cut(s) 287, 517, 626
SchI GAGTC 1 cut(s) 833
ScrFI CCNGG 4 cut(s) 32, 218, 281, 954
SduI GDGCHC 2 cut(s) 310, 656
SfaNI GCATC 3 cut(s) 46, 47, 1036
SfcI CTRYAG 3 cut(s) 486, 524, 1290
SinI GGWCC 3 cut(s) 287, 517, 626
Sse9I AATT 3 cut(s) 598, 916, 1235
SseBI AGGCCT 1 cut(s) 796
SsiI CCGC 5 cut(s) 53, 193, 401, 718, 1271
SspMI CTAG 1 cut(s) 1043
StuI AGGCCT 1 cut(s) 796
StyD4I CCNGG 4 cut(s) 30, 216, 279, 952
StyI CCWWGG 2 cut(s) 42, 1056
TaaI ACNGT 5 cut(s) 214, 233, 651, 760, 966
TaiI ACGT 4 cut(s) 119, 547, 706, 790
TaqI TCGA 6 cut(s) 12, 106, 541, 656, 706, 1181
TasI AATT 3 cut(s) 598, 916, 1235
TauI GCSGC 1 cut(s) 196
TfiI GAWTC 3 cut(s) 495, 502, 934
Tru1I TTAA 2 cut(s) 363, 762
Tru9I TTAA 2 cut(s) 363, 762
TscAI CASTG 2 cut(s) 30, 814
TseFI GTSAC 2 cut(s) 631, 847
TseI GCWGC 5 cut(s) 35, 485, 523, 526, 679
Tsp45I GTSAC 2 cut(s) 631, 847
TspDTI ATGAA 2 cut(s) 401, 1181
TspGWI ACGGA 2 cut(s) 279, 866
TspRI CASTG 2 cut(s) 30, 814
Tth111I GACNNNGTC 1 cut(s) 966
Van91I CCANNNNNTGG 2 cut(s) 332, 1062
VpaK11BI GGWCC 3 cut(s) 287, 517, 626
XapI RAATTY 2 cut(s) 598, 1235
XbaI TCTAGA 1 cut(s) 1042
XmiI GTMKAC 3 cut(s) 12, 72, 1092
XspI CTAG 1 cut(s) 1043
Zsp2I ATGCAT 1 cut(s) 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.