Rmu_sc0003641.1_g000029

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003641.1
OG0000336
Physical Location & Seq
Reverse (-)
114442 .. 115662
1221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003641.1_g000029.1.cds

Sequence Viewer

Length: 1101 bp
atggaagacgtcgacgagatggccgtgcgcctggctgcatccttaggactagcggatgcgggccggccggtggatctgcgaccttctcatgcgatcttttatgggatcctccggcgagcatgctggttgaatgaccactacatcgtccaggagtatgatggccactttctttttaacttgttggacccaactggttgtaaccggattctctggggtagtccttggggttttgacagagctctggtggttttggcaccatatgatggaattggagcaatcaaagatgtaccggttactacactagctttctggatcaaggtgtgtggactatcacaggattttcacacaaatcactgtcttagaaggattggcaatgcaatgggttggtatgttcaaaaggacaccacagagtttgatgtaggaagaatccagatccgggttgaattggacctactgcaacctatcatctttcatcgtagctttactgtagatgatgggattgtggacttcccccccccccccccccaggttggattggagaggtttaggccgactgctaagcctaaggtgaggaaagaaatacgtcggccttcttttgttggaagtggagaaggtagctctggggtgcagaaatactcaaatgcgatgaagttggatggtggtagtgagccaaagtctgatggctcaggtcaggagatagttggagtcgacagctggatagaacaggcaccaactcatgcaatgacttctcctagttgtggaatgcgctgtaagcgtgtagatgaggatgggatttctccaaagaaaatgagattgagcttggcagttggaagaacaaacttggatattatgaccatggctttgtacaacgtaaaaccagtcaaaaaggtgtataagaagagaggcaggccaaaaggtacaaaaaacaaggccaaggagctcaaggttgttcaagcttctcctatgaagaagtccccatcaaagaagagtaagtctccaagaaaacagaaaaagttggtgaatgtttttccggaatttactttagttgaagttgtcaatggtcctaacccatctaaggggaaggaacctatagttgcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 zf-CCHC_4

Protein Analysis

366

Amino Acids

40.7

Weight (kDa)

9.59

Isoelectric Point (pI)

46.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000336)

Species Orthologous Gene IDs
malus_domestica MD05G1024100.v1.1
rosa_chinensis RchiOBHm_Chr2g0152291 RchiOBHm_Chr4g0387411
rosa_laevigata RLG00000009698 RLG00000009699 RLG00000009700 RLG00000023615 RLG00000024265 RLG00000034445 RLG00000036567
rosa_multiflora Rmu_co8268067.1_g000001 Rmu_co8313555.1_g000001 Rmu_co8324697.1_g000001 Rmu_sc0000318.1_g000023 Rmu_sc0000342.1_g000016 Rmu_sc0000447.1_g000010 Rmu_sc0000528.1_g000009 Rmu_sc0000539.1_g000060 Rmu_sc0000929.1_g000023 Rmu_sc0001493.1_g000081 Rmu_sc0001674.1_g000003 Rmu_sc0001791.1_g000023 Rmu_sc0001822.1_g000005 Rmu_sc0001822.1_g000033 Rmu_sc0002061.1_g000010 Rmu_sc0002286.1_g000012 Rmu_sc0002979.1_g000009 Rmu_sc0003158.1_g000016 Rmu_sc0003221.1_g000001 Rmu_sc0003641.1_g000029 Rmu_sc0003742.1_g000012 Rmu_sc0003814.1_g000004 Rmu_sc0003823.1_g000005 Rmu_sc0004002.1_g000005 Rmu_sc0004564.1_g000005 Rmu_sc0005415.1_g000003 Rmu_sc0006050.1_g000025 Rmu_sc0006555.1_g000002 Rmu_sc0009954.1_g000020 Rmu_sc0010421.1_g000007 Rmu_sc0010607.1_g000002 Rmu_sc0011044.1_g000005 Rmu_sc0011497.1_g000015 Rmu_sc0014532.1_g000004 Rmu_sc0014745.1_g000005 Rmu_sc0014821.1_g000001 Rmu_sc0015038.1_g000002 Rmu_sc0015454.1_g000004 Rmu_sc0019663.1_g000002 Rmu_sc0027475.1_g000003 Rmu_sc0028826.1_g000002 Rmu_ssc0000117.1_g000019 Rmu_ssc0000175.1_g000034
rosa_roxburghii Rroxscaffold_3G00237080 Rroxscaffold_4G00288290 Rroxscaffold_6G00397510
rosa_rugosa Rorug01G0035000 Rorug01G0190900 Rorug01G0208500 Rorug01G0208600 Rorug01G0208600 Rorug01G0344900 Rorug01G0479500 Rorug01G0479600 Rorug02G0230400 Rorug02G0320900 Rorug02G0433300 Rorug03G0147400 Rorug03G0169700.1 Rorug03G0169800 Rorug03G0198300 Rorug04G0022900 Rorug04G0064600 Rorug04G0322100 Rorug04G0388900 Rorug05G0153200 Rorug05G0231600 Rorug05G0231700 Rorug05G0231800 Rorug05G0276200 Rorug05G0292400 Rorug05G0314700 Rorug06G0092000 Rorug06G0260900 Rorug06G0273600 RorugPtG0003200
rosa_samantha Rh1AG264100 Rh1AG292500 Rh1AG423800 Rh2AG098000 Rh2AG232700 Rh2AG361100 Rh2AG372900 Rh2BG099200 Rh2BG246000 Rh2BG260600 Rh2BG378400 Rh3BG142300 Rh3BG252900 Rh3BG267700 Rh3DG302400 Rh5BG059800 Rh5BG320000 Rh5BG530500 Rh6AG089300 Rh6AG089400 Rh6AG127400 Rh6AG376700 Rh7CG488700 Rh7DG265900
rosa_wichuraiana Rw2G040640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 12
AccB1I GGYRCC 2 cut(s) 253, 727
AccB7I CCANNNNNTGG 1 cut(s) 263
AccI GTMKAC 2 cut(s) 12, 708
AccIII TCCGGA 1 cut(s) 1030
AciI CCGC 2 cut(s) 53, 59
AclWI GGATC 5 cut(s) 81, 100, 113, 320, 427
AcoI YGGCCR 3 cut(s) 21, 65, 160
AcsI RAATTY 1 cut(s) 1034
AcyI GRCGYC 1 cut(s) 9
AfaI GTAC 3 cut(s) 288, 866, 919
AfiI CCNNNNNNNGG 8 cut(s) 70, 263, 436, 526, 530, 758, 1075, 1076
AgeI ACCGGT 1 cut(s) 289
AgsI TTSAA 5 cut(s) 130, 395, 443, 953, 1049
AjnI CCWGG 3 cut(s) 30, 147, 525
AluBI AGCT 8 cut(s) 239, 305, 480, 618, 714, 819, 940, 956
AluI AGCT 8 cut(s) 239, 305, 480, 618, 714, 819, 940, 956
Alw21I GWGCWC 2 cut(s) 241, 942
Alw26I GTCTC 1 cut(s) 999
AlwI GGATC 5 cut(s) 81, 100, 113, 320, 427
Aor13HI TCCGGA 1 cut(s) 1030
AoxI GGCC 8 cut(s) 21, 61, 65, 160, 548, 587, 908, 930
ApeKI GCWGC 1 cut(s) 35
ApoI RAATTY 1 cut(s) 1034
ArsI GACNNNNNNTTYG 2 cut(s) 844, 876
AsiGI ACCGGT 1 cut(s) 289
AspLEI GCGC 2 cut(s) 30, 768
AspS9I GGNCC 4 cut(s) 61, 184, 448, 1061
AsuC2I CCSGG 1 cut(s) 437
AsuHPI GGTGA 2 cut(s) 580, 1030
AvaII GGWCC 3 cut(s) 184, 448, 1061
AxyI CCTNAGG 2 cut(s) 43, 564
BalI TGGCCA 1 cut(s) 162
BamHI GGATCC 1 cut(s) 105
BanI GGYRCC 2 cut(s) 253, 727
BanII GRGCYC 2 cut(s) 241, 942
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 2 cut(s) 241, 942
BbvI GCAGC 1 cut(s) 22
BccI CCATC 9 cut(s) 13, 152, 257, 488, 650, 674, 782, 985, 1078
BceAI ACGGC 1 cut(s) 8
BciT130I CCWGG 3 cut(s) 32, 149, 527
BcnI CCSGG 1 cut(s) 437
BcoDI GTCTC 1 cut(s) 999
BfaI CTAG 3 cut(s) 50, 302, 753
BfmI CTRYAG 2 cut(s) 486, 1089
BisI GCNGC 1 cut(s) 36
BlpI GCTNAGC 1 cut(s) 558
BlsI GCNGC 1 cut(s) 37
Bme1390I CCNGG 4 cut(s) 32, 149, 437, 527
Bme18I GGWCC 3 cut(s) 184, 448, 1061
BmgT120I GGNCC 4 cut(s) 61, 184, 448, 1061
BmiI GGNNCC 5 cut(s) 107, 186, 255, 729, 1086
BmrFI CCNGG 4 cut(s) 32, 149, 437, 527
BmsI GCATC 2 cut(s) 46, 47
BpiI GAAGAC 1 cut(s) 12
BplI GAGNNNNNCTC 2 cut(s) 979, 1011
Bpu10I CCTNAGC 1 cut(s) 685
Bpu1102I GCTNAGC 1 cut(s) 558
BpuEI CTTGAG 1 cut(s) 926
BpuMI CCSGG 1 cut(s) 437
BsaHI GRCGYC 1 cut(s) 9
BsaJI CCNNGG 4 cut(s) 221, 525, 855, 933
BsaWI WCCGGW 3 cut(s) 201, 289, 1030
Bsc4I CCNNNNNNNGG 8 cut(s) 70, 263, 436, 526, 530, 758, 1075, 1076
Bse118I RCCGGY 3 cut(s) 63, 67, 289
Bse1I ACTGG 2 cut(s) 196, 878
Bse21I CCTNAGG 2 cut(s) 43, 564
Bse3DI GCAATG 3 cut(s) 379, 384, 747
BseAI TCCGGA 1 cut(s) 1030
BseBI CCWGG 3 cut(s) 32, 149, 527
BseDI CCNNGG 4 cut(s) 221, 525, 855, 933
BseGI GGATG 4 cut(s) 38, 61, 661, 793
BseLI CCNNNNNNNGG 8 cut(s) 70, 263, 436, 526, 530, 758, 1075, 1076
BseMI GCAATG 3 cut(s) 379, 384, 747
BseMII CTCAG 1 cut(s) 699
BseNI ACTGG 2 cut(s) 196, 878
BseX3I CGGCCG 1 cut(s) 65
BseXI GCAGC 1 cut(s) 22
BsgI GTGCAG 1 cut(s) 647
Bsh1285I CGRYCG 1 cut(s) 68
BshFI GGCC 8 cut(s) 23, 63, 67, 162, 550, 589, 910, 932
BshNI GGYRCC 2 cut(s) 253, 727
BshTI ACCGGT 1 cut(s) 289
BsiEI CGRYCG 1 cut(s) 68
BsiHKAI GWGCWC 2 cut(s) 241, 942
BsiSI CCGG 7 cut(s) 64, 68, 112, 202, 290, 436, 1031
BslFI GGGAC 1 cut(s) 958
BslI CCNNNNNNNGG 8 cut(s) 70, 263, 436, 526, 530, 758, 1075, 1076
BsmAI GTCTC 1 cut(s) 999
BsmFI GGGAC 1 cut(s) 958
BsmI GAATGC 1 cut(s) 768
BsnI GGCC 8 cut(s) 23, 63, 67, 162, 550, 589, 910, 932
Bsp1286I GDGCHC 2 cut(s) 241, 942
Bsp13I TCCGGA 1 cut(s) 1030
Bsp1407I TGTACA 1 cut(s) 864
Bsp143I GATC 5 cut(s) 73, 93, 105, 312, 432
Bsp1720I GCTNAGC 1 cut(s) 558
Bsp19I CCATGG 1 cut(s) 855
BspACI CCGC 2 cut(s) 53, 59
BspANI GGCC 8 cut(s) 23, 63, 67, 162, 550, 589, 910, 932
BspCNI CTCAG 1 cut(s) 698
BspEI TCCGGA 1 cut(s) 1030
BspLI GGNNCC 5 cut(s) 107, 186, 255, 729, 1086
BspPI GGATC 5 cut(s) 81, 100, 113, 320, 427
BspT107I GGYRCC 2 cut(s) 253, 727
BsrDI GCAATG 3 cut(s) 379, 384, 747
BsrFI RCCGGY 3 cut(s) 63, 67, 289
BsrGI TGTACA 1 cut(s) 864
BsrI ACTGG 2 cut(s) 196, 878
BssAI RCCGGY 3 cut(s) 63, 67, 289
BssECI CCNNGG 4 cut(s) 221, 525, 855, 933
BssMI GATC 5 cut(s) 73, 93, 105, 312, 432
BssNI GRCGYC 1 cut(s) 9
BssT1I CCWWGG 3 cut(s) 221, 855, 933
Bst2UI CCWGG 3 cut(s) 32, 149, 527
Bst4CI ACNGT 2 cut(s) 356, 487
Bst6I CTCTTC 2 cut(s) 893, 980
BstACI GRCGYC 1 cut(s) 9
BstAUI TGTACA 1 cut(s) 864
BstC8I GCNNGC 5 cut(s) 61, 65, 117, 121, 908
BstDEI CTNAG 7 cut(s) 43, 359, 558, 564, 685, 1074, 1098
BstDSI CCRYGG 1 cut(s) 855
BstF5I GGATG 4 cut(s) 38, 61, 661, 793
BstHHI GCGC 2 cut(s) 30, 768
BstKTI GATC 5 cut(s) 76, 96, 108, 315, 435
BstMAI GTCTC 1 cut(s) 999
BstMBI GATC 5 cut(s) 73, 93, 105, 312, 432
BstMCI CGRYCG 1 cut(s) 68
BstMWI GCNNNNNNNGC 1 cut(s) 772
BstNI CCWGG 3 cut(s) 32, 149, 527
BstNSI RCATGY 1 cut(s) 123
BstSCI CCNGG 4 cut(s) 30, 147, 435, 525
BstSFI CTRYAG 2 cut(s) 486, 1089
BstV1I GCAGC 1 cut(s) 22
BstV2I GAAGAC 1 cut(s) 12
BstX2I RGATCY 3 cut(s) 73, 105, 432
BstYI RGATCY 3 cut(s) 73, 105, 432
BstZI CGGCCG 1 cut(s) 65
Bsu36I CCTNAGG 2 cut(s) 43, 564
BsuRI GGCC 8 cut(s) 23, 63, 67, 162, 550, 589, 910, 932
BtgI CCRYGG 1 cut(s) 855
BtgZI GCGATG 1 cut(s) 659
BtsCI GGATG 4 cut(s) 38, 61, 661, 793
BtsIMutI CAGTG 1 cut(s) 352
Cac8I GCNNGC 5 cut(s) 61, 65, 117, 121, 908
CfoI GCGC 2 cut(s) 30, 768
Cfr10I RCCGGY 3 cut(s) 63, 67, 289
Cfr13I GGNCC 4 cut(s) 61, 184, 448, 1061
Csp6I GTAC 3 cut(s) 287, 865, 918
CspAI ACCGGT 1 cut(s) 289
CspCI CAANNNNNGTGG 4 cut(s) 304, 339, 394, 429
CviAII CATG 4 cut(s) 89, 120, 737, 856
CviQI GTAC 3 cut(s) 287, 865, 918
DdeI CTNAG 7 cut(s) 43, 359, 558, 564, 685, 1074, 1098
DpnI GATC 5 cut(s) 75, 95, 107, 314, 434
DpnII GATC 5 cut(s) 73, 93, 105, 312, 432
EaeI YGGCCR 3 cut(s) 21, 65, 160
EagI CGGCCG 1 cut(s) 65
Eam1104I CTCTTC 2 cut(s) 893, 980
EarI CTCTTC 2 cut(s) 893, 980
Ecl136II GAGCTC 2 cut(s) 239, 940
EclXI CGGCCG 1 cut(s) 65
Eco130I CCWWGG 3 cut(s) 221, 855, 933
Eco24I GRGCYC 2 cut(s) 241, 942
Eco47I GGWCC 3 cut(s) 184, 448, 1061
Eco52I CGGCCG 1 cut(s) 65
Eco53kI GAGCTC 2 cut(s) 239, 940
Eco81I CCTNAGG 2 cut(s) 43, 564
EcoICRI GAGCTC 2 cut(s) 239, 940
EcoRII CCWGG 3 cut(s) 30, 147, 525
EcoT14I CCWWGG 3 cut(s) 221, 855, 933
EcoT38I GRGCYC 2 cut(s) 241, 942
ErhI CCWWGG 3 cut(s) 221, 855, 933
FaeI CATG 4 cut(s) 92, 123, 740, 859
FaqI GGGAC 1 cut(s) 958
FatI CATG 4 cut(s) 88, 119, 736, 855
FauI CCCGC 1 cut(s) 52
FauNDI CATATG 1 cut(s) 259
FblI GTMKAC 2 cut(s) 12, 708
Fnu4HI GCNGC 1 cut(s) 36
FokI GGATG 4 cut(s) 25, 68, 668, 800
FriOI GRGCYC 2 cut(s) 241, 942
FseI GGCCGGCC 1 cut(s) 67
Fsp4HI GCNGC 1 cut(s) 36
FspBI CTAG 3 cut(s) 50, 302, 753
GlaI GCGC 2 cut(s) 29, 767
GluI GCNGC 1 cut(s) 36
HaeIII GGCC 8 cut(s) 23, 63, 67, 162, 550, 589, 910, 932
HapII CCGG 7 cut(s) 64, 68, 112, 202, 290, 436, 1031
HhaI GCGC 2 cut(s) 30, 768
Hin1I GRCGYC 1 cut(s) 9
Hin1II CATG 4 cut(s) 92, 123, 740, 859
Hin6I GCGC 2 cut(s) 28, 766
HinP1I GCGC 2 cut(s) 28, 766
HincII GTYRAC 2 cut(s) 13, 709
HindII GTYRAC 2 cut(s) 13, 709
HindIII AAGCTT 1 cut(s) 954
HinfI GANTC 3 cut(s) 205, 426, 705
HpaII CCGG 7 cut(s) 64, 68, 112, 202, 290, 436, 1031
HphI GGTGA 2 cut(s) 580, 1030
Hpy166II GTNNAC 4 cut(s) 13, 326, 505, 709
Hpy188I TCNGA 1 cut(s) 679
Hpy188III TCNNGA 4 cut(s) 310, 430, 692, 1031
Hpy8I GTNNAC 4 cut(s) 13, 326, 505, 709
Hpy99I CGWCG 3 cut(s) 14, 17, 588
HpyAV CCTTC 5 cut(s) 93, 357, 600, 605, 1075
HpyCH4III ACNGT 2 cut(s) 356, 487
HpyCH4IV ACGT 3 cut(s) 9, 583, 870
HpyCH4V TGCA 5 cut(s) 38, 377, 457, 628, 740
HpyF10VI GCNNNNNNNGC 1 cut(s) 772
HpyF3I CTNAG 7 cut(s) 43, 359, 558, 564, 685, 1074, 1098
HpySE526I ACGT 3 cut(s) 9, 583, 870
Hsp92I GRCGYC 1 cut(s) 9
Hsp92II CATG 4 cut(s) 92, 123, 740, 859
HspAI GCGC 2 cut(s) 28, 766
Kpn2I TCCGGA 1 cut(s) 1030
KroI GCCGGC 1 cut(s) 63
KroNI GCCGGC 1 cut(s) 65
Kzo9I GATC 5 cut(s) 73, 93, 105, 312, 432
LmnI GCTCC 2 cut(s) 272, 937
Lsp1109I GCAGC 1 cut(s) 22
LweI GCATC 2 cut(s) 46, 47
MaeI CTAG 3 cut(s) 50, 302, 753
MaeII ACGT 3 cut(s) 9, 583, 870
MaeIII GTNAC 2 cut(s) 197, 292
MalI GATC 5 cut(s) 75, 95, 107, 314, 434
MboI GATC 5 cut(s) 73, 93, 105, 312, 432
MboII GAAGA 6 cut(s) 17, 435, 843, 910, 979, 997
MflI RGATCY 3 cut(s) 73, 105, 432
MhlI GDGCHC 2 cut(s) 241, 942
MlsI TGGCCA 1 cut(s) 162
MluCI AATT 3 cut(s) 267, 443, 1034
MluNI TGGCCA 1 cut(s) 162
MlyI GAGTC 1 cut(s) 714
MmeI TCCRAC 6 cut(s) 162, 511, 580, 633, 682, 808
MnlI CCTC 5 cut(s) 119, 534, 564, 778, 896
Mox20I TGGCCA 1 cut(s) 162
MroI TCCGGA 1 cut(s) 1030
MroNI GCCGGC 1 cut(s) 63
MscI TGGCCA 1 cut(s) 162
MseI TTAA 1 cut(s) 174
Msp20I TGGCCA 1 cut(s) 162
MspA1I CMGCKG 1 cut(s) 714
MspI CCGG 7 cut(s) 64, 68, 112, 202, 290, 436, 1031
MspR9I CCNGG 4 cut(s) 32, 149, 437, 527
Mva1269I GAATGC 1 cut(s) 768
MvaI CCWGG 3 cut(s) 32, 149, 527
MwoI GCNNNNNNNGC 1 cut(s) 772
NaeI GCCGGC 1 cut(s) 65
NciI CCSGG 1 cut(s) 437
NcoI CCATGG 1 cut(s) 855
NdeI CATATG 1 cut(s) 259
NdeII GATC 5 cut(s) 73, 93, 105, 312, 432
NgoMIV GCCGGC 1 cut(s) 63
NlaIII CATG 4 cut(s) 92, 123, 740, 859
NlaIV GGNNCC 5 cut(s) 107, 186, 255, 729, 1086
NspI RCATGY 1 cut(s) 123
PaeI GCATGC 1 cut(s) 123
PcsI WCGNNNNNNNCGW 1 cut(s) 21
PctI GAATGC 1 cut(s) 768
PdiI GCCGGC 1 cut(s) 65
PfeI GAWTC 2 cut(s) 205, 426
PflMI CCANNNNNTGG 1 cut(s) 263
PfoI TCCNGGA 1 cut(s) 147
PinAI ACCGGT 1 cut(s) 289
PkrI GCNGC 1 cut(s) 37
PleI GAGTC 1 cut(s) 713
PpsI GAGTC 1 cut(s) 713
Psp124BI GAGCTC 2 cut(s) 241, 942
Psp6I CCWGG 3 cut(s) 30, 147, 525
PspGI CCWGG 3 cut(s) 30, 147, 525
PspN4I GGNNCC 5 cut(s) 107, 186, 255, 729, 1086
PspPI GGNCC 4 cut(s) 61, 184, 448, 1061
PsuI RGATCY 3 cut(s) 73, 105, 432
PvuII CAGCTG 1 cut(s) 714
RigI GGCCGGCC 1 cut(s) 67
RsaI GTAC 3 cut(s) 288, 866, 919
RsaNI GTAC 3 cut(s) 287, 865, 918
SacI GAGCTC 2 cut(s) 241, 942
SalI GTCGAC 2 cut(s) 11, 707
SaqAI TTAA 1 cut(s) 174
SatI GCNGC 1 cut(s) 36
Sau3AI GATC 5 cut(s) 73, 93, 105, 312, 432
Sau96I GGNCC 4 cut(s) 61, 184, 448, 1061
SchI GAGTC 1 cut(s) 714
ScrFI CCNGG 4 cut(s) 32, 149, 437, 527
SduI GDGCHC 2 cut(s) 241, 942
SfaNI GCATC 2 cut(s) 46, 47
SfcI CTRYAG 2 cut(s) 486, 1089
SgrDI CGTCGACG 1 cut(s) 11
SinI GGWCC 3 cut(s) 184, 448, 1061
SmlI CTYRAG 1 cut(s) 941
SmoI CTYRAG 1 cut(s) 941
SphI GCATGC 1 cut(s) 123
Sse9I AATT 3 cut(s) 267, 443, 1034
SsiI CCGC 2 cut(s) 53, 59
SspMI CTAG 3 cut(s) 50, 302, 753
SstI GAGCTC 2 cut(s) 241, 942
StyD4I CCNGG 4 cut(s) 30, 147, 435, 525
StyI CCWWGG 3 cut(s) 221, 855, 933
TaaI ACNGT 2 cut(s) 356, 487
TaiI ACGT 3 cut(s) 12, 586, 873
TaqI TCGA 2 cut(s) 12, 708
TasI AATT 3 cut(s) 267, 443, 1034
TatI WGTACW 1 cut(s) 864
TfiI GAWTC 2 cut(s) 205, 426
Tru1I TTAA 1 cut(s) 174
Tru9I TTAA 1 cut(s) 174
TscAI CASTG 1 cut(s) 359
TseI GCWGC 1 cut(s) 35
TspDTI ATGAA 3 cut(s) 461, 662, 980
TspRI CASTG 1 cut(s) 359
Van91I CCANNNNNTGG 1 cut(s) 263
VpaK11BI GGWCC 3 cut(s) 184, 448, 1061
XapI RAATTY 1 cut(s) 1034
XceI RCATGY 1 cut(s) 123
XcmI CCANNNNNNNNNTGG 1 cut(s) 155
XmiI GTMKAC 2 cut(s) 12, 708
XspI CTAG 3 cut(s) 50, 302, 753
ZraI GACGTC 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.