pycom15g14750

Synaptotagmin-5-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
10102805 .. 10106358
3554 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g14750.6

Sequence Viewer

Length: 1461 bp
ATGTGGCCTTATATCAATGAGGCAGCGTCTGAGCTGATAAAGACTTCAGCGGAGCCAATTCTGGAGCAGTATAGACCAGTCATATTGTCCTCGCTCAAATTTTCCAAGTTTACTCTTGGTACGGTGGCACCTCAGTTTACAGGGGTTTCTATAATTGAAGATGGAGGTGACAGTATCACTATGGAGTTGGAAATGCAGTGGGATGGAAATCCAAGTATAATACTTGCTATCAAAACTTTAGTTGGTGTAGCACTACCGGTGCAGGTGAAAGATATTGGATTCACGGGGGTATTCAGGCTGATTTTTAAGCCTCTGGTTGACGAGTTTCCGTGTTTTGGAGCTGTTTGCTATTCATTGAGAGAAAAGAAAAAGTTAGATTTTAAGCTTAAGGTTGTGGGTGGCGACATATCTACATTACCTGGGATATCCGATGCAATTGAGGGGACCATACGGGATGCTGTTGAGGATTCAATTACATGGCCTGTTCGGAAGATTTTTCCCATTTTGCCCGGGGATTACAGTGATCTGGAGTTAAAGCCAGTCGGAGTGCTAGAGGTGAAACTTGTGCAGGCAAAGGAGTTAACGAATAAAGACATGGTGGGAAAATCAGATCCCTTTGCAAGACTATATATACGACCTTTACCAGACAGAATGAAAAGAAGCAAAACAATTAACAACGATTTGAATCCCATCTGGAATGAGCACTTTGAATTTATAGTTGAAGATGAAACGACTCAACATTTGGTGGTTAAAGTTTATGATGATGAGGGACTTCAGGCGTCTGAGCTCATTGGATGTGCTCAAGTACAACTGACTGAACTTCAGCCTGGTAAAGTGAAGGATGTATGGTTGAAGCTGGTTAAAAGCTTGGATATCCAAAGAGATAATAAAAACCGCGGGCAGGTGCATTTGGAGCTGTTATATTGTCCATTTGGCATGGAGAATGGCTTTGCTAATCCTTTTACTTCCAACTCCGCAATGACCTCTTTGGAAAAGGCACTTAAAAGTGGAATGAACGGAGCAGATGCTACTGAAAGTGAAAAGGAAGCCACACAGAAGAGAAGGGAGGTCATAATTAGAGGTGTACTAACTATTACTATAATATCTGCTGAAGACTTGCCACCTGTTGATCTGATGGGGAAGGCTGATCCTTATGTGGTGCTCACCTTGAAGAAATCAGGAACGAAAAACAAAACTAGGGTTGTTAATGATAACTTGAATCCTGTTTGGAATCAAACTTTCGACTTTGTTGTCGAGGATGGATTGCATGACATGCTCATACTTGAAGTCTGGGACCACGATACTTTTGGCAAGGACTATATGGGCAGATGCATCTTGACCCTCACTAGGGTCATCTTAGAAGGGGAATACCAAGACTCGATACCGCTAGATGGAGCCAAATCTGGGAAATTGAACGTGCATCTTAAGTGGAATGCACAACCAATTTACCGCGAGTCTTGA

Protein Analysis

487

Amino Acids

54.45

Weight (kDa)

5.18

Isoelectric Point (pI)

27.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 253, 892
AasI GACNNNNNNGTC 1 cut(s) 1250
Acc36I ACCTGC 2 cut(s) 253, 892
AccB1I GGYRCC 1 cut(s) 127
AccII CGCG 2 cut(s) 897, 1452
AciI CCGC 6 cut(s) 50, 895, 897, 975, 1385, 1450
AclWI GGATC 2 cut(s) 605, 1142
AcsI RAATTY 2 cut(s) 98, 710
AcuI CTGAAG 4 cut(s) 30, 758, 806, 1131
AcyI GRCGYC 1 cut(s) 779
AfaI GTAC 3 cut(s) 121, 807, 1086
AfiI CCNNNNNNNGG 6 cut(s) 335, 901, 1347, 1348, 1391, 1404
AflII CTTAAG 2 cut(s) 386, 1424
AgeI ACCGGT 1 cut(s) 256
AjnI CCWGG 2 cut(s) 418, 826
AluBI AGCT 7 cut(s) 34, 341, 385, 787, 856, 867, 916
AluI AGCT 7 cut(s) 34, 341, 385, 787, 856, 867, 916
Alw21I GWGCWC 4 cut(s) 705, 789, 802, 1164
AlwI GGATC 2 cut(s) 605, 1142
AlwNI CAGNNNCTG 1 cut(s) 29
Ama87I CYCGRG 1 cut(s) 509
AoxI GGCC 2 cut(s) 5, 479
ApeKI GCWGC 1 cut(s) 23
ApoI RAATTY 2 cut(s) 98, 710
ArsI GACNNNNNNTTYG 2 cut(s) 724, 756
AsiGI ACCGGT 1 cut(s) 256
AspS9I GGNCC 2 cut(s) 444, 1294
AsuC2I CCSGG 2 cut(s) 510, 511
AsuHPI GGTGA 4 cut(s) 179, 277, 568, 1156
AvaI CYCGRG 1 cut(s) 509
AvaII GGWCC 2 cut(s) 444, 1294
BanI GGYRCC 1 cut(s) 127
BanII GRGCYC 1 cut(s) 789
BbsI GAAGAC 1 cut(s) 1119
Bbv12I GWGCWC 4 cut(s) 705, 789, 802, 1164
BbvI GCAGC 1 cut(s) 35
BccI CCATC 6 cut(s) 155, 197, 698, 1129, 1253, 1385
BciT130I CCWGG 2 cut(s) 420, 828
BcnI CCSGG 2 cut(s) 510, 511
BfaI CTAG 4 cut(s) 551, 1197, 1347, 1388
BfrI CTTAAG 2 cut(s) 386, 1424
BfuAI ACCTGC 2 cut(s) 253, 892
BisI GCNGC 1 cut(s) 24
BlsI GCNGC 1 cut(s) 25
Bme1390I CCNGG 4 cut(s) 420, 510, 511, 828
Bme18I GGWCC 2 cut(s) 444, 1294
BmeT110I CYCGRG 1 cut(s) 509
BmgT120I GGNCC 2 cut(s) 444, 1294
BmiI GGNNCC 5 cut(s) 54, 129, 445, 1295, 1396
BmrFI CCNGG 4 cut(s) 420, 510, 511, 828
BmsI GCATC 6 cut(s) 421, 445, 1015, 1319, 1341, 1429
BpiI GAAGAC 1 cut(s) 1119
BpmI CTGGAG 2 cut(s) 83, 548
BpuEI CTTGAG 1 cut(s) 786
BpuMI CCSGG 2 cut(s) 510, 511
BsaBI GATNNNNATC 2 cut(s) 207, 684
BsaHI GRCGYC 1 cut(s) 779
BsaJI CCNNGG 4 cut(s) 419, 509, 510, 895
BsaWI WCCGGW 1 cut(s) 256
Bsc4I CCNNNNNNNGG 6 cut(s) 335, 901, 1347, 1348, 1391, 1404
Bse118I RCCGGY 1 cut(s) 256
Bse1I ACTGG 2 cut(s) 77, 539
Bse3DI GCAATG 1 cut(s) 984
Bse8I GATNNNNATC 2 cut(s) 207, 684
BseBI CCWGG 2 cut(s) 420, 828
BseDI CCNNGG 4 cut(s) 419, 509, 510, 895
BseGI GGATG 5 cut(s) 208, 460, 800, 847, 1264
BseJI GATNNNNATC 2 cut(s) 207, 684
BseLI CCNNNNNNNGG 6 cut(s) 335, 901, 1347, 1348, 1391, 1404
BseMI GCAATG 1 cut(s) 984
BseMII CTCAG 3 cut(s) 21, 146, 774
BseNI ACTGG 2 cut(s) 77, 539
BseXI GCAGC 1 cut(s) 35
BsgI GTGCAG 2 cut(s) 281, 587
Bsh1236I CGCG 2 cut(s) 897, 1452
BshFI GGCC 2 cut(s) 7, 481
BshNI GGYRCC 1 cut(s) 127
BshTI ACCGGT 1 cut(s) 256
BsiHKAI GWGCWC 4 cut(s) 705, 789, 802, 1164
BsiHKCI CYCGRG 1 cut(s) 509
BsiSI CCGG 2 cut(s) 257, 510
BslFI GGGAC 3 cut(s) 457, 783, 1307
BslI CCNNNNNNNGG 6 cut(s) 335, 901, 1347, 1348, 1391, 1404
BsmFI GGGAC 3 cut(s) 457, 783, 1307
BsmI GAATGC 1 cut(s) 1438
BsnI GGCC 2 cut(s) 7, 481
BsoBI CYCGRG 1 cut(s) 509
Bsp1286I GDGCHC 4 cut(s) 705, 789, 802, 1164
Bsp143I GATC 4 cut(s) 523, 610, 1129, 1147
BspACI CCGC 6 cut(s) 50, 895, 897, 975, 1385, 1450
BspANI GGCC 2 cut(s) 7, 481
BspCNI CTCAG 3 cut(s) 22, 145, 775
BspFNI CGCG 2 cut(s) 897, 1452
BspLI GGNNCC 5 cut(s) 54, 129, 445, 1295, 1396
BspMI ACCTGC 2 cut(s) 253, 892
BspPI GGATC 2 cut(s) 605, 1142
BspT107I GGYRCC 1 cut(s) 127
BspTI CTTAAG 2 cut(s) 386, 1424
BsrDI GCAATG 1 cut(s) 984
BsrFI RCCGGY 1 cut(s) 256
BsrI ACTGG 2 cut(s) 77, 539
BssAI RCCGGY 1 cut(s) 256
BssECI CCNNGG 4 cut(s) 419, 509, 510, 895
BssMI GATC 4 cut(s) 523, 610, 1129, 1147
BssNI GRCGYC 1 cut(s) 779
Bst2UI CCWGG 2 cut(s) 420, 828
Bst4CI ACNGT 3 cut(s) 124, 173, 521
Bst6I CTCTTC 1 cut(s) 1052
BstACI GRCGYC 1 cut(s) 779
BstAFI CTTAAG 2 cut(s) 386, 1424
BstAPI GCANNNNNTGC 1 cut(s) 1273
BstC8I GCNNGC 2 cut(s) 570, 899
BstDEI CTNAG 4 cut(s) 30, 132, 783, 1357
BstDSI CCRYGG 1 cut(s) 895
BstF5I GGATG 5 cut(s) 208, 460, 800, 847, 1264
BstFNI CGCG 2 cut(s) 897, 1452
BstKTI GATC 4 cut(s) 526, 613, 1132, 1150
BstMBI GATC 4 cut(s) 523, 610, 1129, 1147
BstMWI GCNNNNNNNGC 2 cut(s) 913, 1273
BstNI CCWGG 2 cut(s) 420, 828
BstNSI RCATGY 1 cut(s) 1276
BstSCI CCNGG 4 cut(s) 418, 508, 509, 826
BstUI CGCG 2 cut(s) 897, 1452
BstV1I GCAGC 1 cut(s) 35
BstV2I GAAGAC 1 cut(s) 1119
BstX2I RGATCY 1 cut(s) 610
BstYI RGATCY 1 cut(s) 610
BsuRI GGCC 2 cut(s) 7, 481
BtgI CCRYGG 1 cut(s) 895
BtsCI GGATG 5 cut(s) 208, 460, 800, 847, 1264
BtsI GCAGTG 1 cut(s) 203
BtsIMutI CAGTG 2 cut(s) 203, 526
BveI ACCTGC 2 cut(s) 253, 892
Cac8I GCNNGC 2 cut(s) 570, 899
CaiI CAGNNNCTG 1 cut(s) 29
Cfr10I RCCGGY 1 cut(s) 256
Cfr13I GGNCC 2 cut(s) 444, 1294
Cfr42I CCGCGG 1 cut(s) 898
Cfr9I CCCGGG 1 cut(s) 509
CseI GACGC 2 cut(s) 15, 768
Csp6I GTAC 3 cut(s) 120, 806, 1085
CspAI ACCGGT 1 cut(s) 256
CviAII CATG 5 cut(s) 477, 595, 937, 1268, 1273
CviQI GTAC 3 cut(s) 120, 806, 1085
DdeI CTNAG 4 cut(s) 30, 132, 783, 1357
DpnI GATC 4 cut(s) 525, 612, 1131, 1149
DpnII GATC 4 cut(s) 523, 610, 1129, 1147
DrdI GACNNNNNNGTC 1 cut(s) 1250
DseDI GACNNNNNNGTC 1 cut(s) 1250
Eam1104I CTCTTC 1 cut(s) 1052
EarI CTCTTC 1 cut(s) 1052
Ecl136II GAGCTC 1 cut(s) 787
Eco24I GRGCYC 1 cut(s) 789
Eco32I GATATC 2 cut(s) 426, 874
Eco47I GGWCC 2 cut(s) 444, 1294
Eco53kI GAGCTC 1 cut(s) 787
Eco57I CTGAAG 4 cut(s) 30, 758, 806, 1131
Eco88I CYCGRG 1 cut(s) 509
EcoICRI GAGCTC 1 cut(s) 787
EcoRII CCWGG 2 cut(s) 418, 826
EcoRV GATATC 2 cut(s) 426, 874
EcoT22I ATGCAT 1 cut(s) 1334
EcoT38I GRGCYC 1 cut(s) 789
FaeI CATG 5 cut(s) 480, 598, 940, 1271, 1276
FaqI GGGAC 3 cut(s) 457, 783, 1307
FatI CATG 5 cut(s) 476, 594, 936, 1267, 1272
FauI CCCGC 1 cut(s) 890
Fnu4HI GCNGC 1 cut(s) 24
FokI GGATG 5 cut(s) 215, 467, 807, 854, 1271
FriOI GRGCYC 1 cut(s) 789
Fsp4HI GCNGC 1 cut(s) 24
FspBI CTAG 4 cut(s) 551, 1197, 1347, 1388
GluI GCNGC 1 cut(s) 24
GsuI CTGGAG 2 cut(s) 83, 548
HaeIII GGCC 2 cut(s) 7, 481
HapII CCGG 2 cut(s) 257, 510
HgaI GACGC 2 cut(s) 15, 768
Hin1I GRCGYC 1 cut(s) 779
Hin1II CATG 5 cut(s) 480, 598, 940, 1271, 1276
HincII GTYRAC 2 cut(s) 319, 582
HindII GTYRAC 2 cut(s) 319, 582
HindIII AAGCTT 2 cut(s) 383, 865
HinfI GANTC 8 cut(s) 279, 467, 685, 733, 1219, 1231, 1376, 1454
HpaI GTTAAC 1 cut(s) 582
HpaII CCGG 2 cut(s) 257, 510
HphI GGTGA 4 cut(s) 179, 277, 568, 1156
Hpy166II GTNNAC 5 cut(s) 111, 138, 319, 582, 1085
Hpy188I TCNGA 7 cut(s) 31, 430, 489, 545, 610, 784, 1134
Hpy188III TCNNGA 6 cut(s) 62, 527, 694, 1179, 1336, 1458
Hpy8I GTNNAC 5 cut(s) 111, 138, 319, 582, 1085
HpyAV CCTTC 4 cut(s) 832, 1056, 1135, 1355
HpyCH4III ACNGT 3 cut(s) 124, 173, 521
HpyCH4IV ACGT 1 cut(s) 1416
HpyF10VI GCNNNNNNNGC 2 cut(s) 913, 1273
HpyF3I CTNAG 4 cut(s) 30, 132, 783, 1357
HpySE526I ACGT 1 cut(s) 1416
Hsp92I GRCGYC 1 cut(s) 779
Hsp92II CATG 5 cut(s) 480, 598, 940, 1271, 1276
KspAI GTTAAC 1 cut(s) 582
KspI CCGCGG 1 cut(s) 898
Kzo9I GATC 4 cut(s) 523, 610, 1129, 1147
LmnI GCTCC 6 cut(s) 52, 64, 338, 913, 1019, 1394
Lsp1109I GCAGC 1 cut(s) 35
LweI GCATC 6 cut(s) 421, 445, 1015, 1319, 1341, 1429
MaeI CTAG 4 cut(s) 551, 1197, 1347, 1388
MaeII ACGT 1 cut(s) 1416
MaeIII GTNAC 1 cut(s) 167
MalI GATC 4 cut(s) 525, 612, 1131, 1149
MboI GATC 4 cut(s) 523, 610, 1129, 1147
MboII GAAGA 6 cut(s) 170, 502, 734, 1069, 1124, 1183
MfeI CAATTG 1 cut(s) 435
MflI RGATCY 1 cut(s) 610
MhlI GDGCHC 4 cut(s) 705, 789, 802, 1164
MlyI GAGTC 2 cut(s) 727, 1370
MmeI TCCRAC 3 cut(s) 168, 523, 993
Mph1103I ATGCAT 1 cut(s) 1334
MspA1I CMGCKG 2 cut(s) 50, 897
MspCI CTTAAG 2 cut(s) 386, 1424
MspI CCGG 2 cut(s) 257, 510
MspR9I CCNGG 4 cut(s) 420, 510, 511, 828
MunI CAATTG 1 cut(s) 435
Mva1269I GAATGC 1 cut(s) 1438
MvaI CCWGG 2 cut(s) 420, 828
MvnI CGCG 2 cut(s) 897, 1452
MwoI GCNNNNNNNGC 2 cut(s) 913, 1273
NciI CCSGG 2 cut(s) 510, 511
NdeII GATC 4 cut(s) 523, 610, 1129, 1147
NlaIII CATG 5 cut(s) 480, 598, 940, 1271, 1276
NlaIV GGNNCC 5 cut(s) 54, 129, 445, 1295, 1396
NmuCI GTSAC 1 cut(s) 167
NsiI ATGCAT 1 cut(s) 1334
NspI RCATGY 1 cut(s) 1276
PaqCI CACCTGC 2 cut(s) 253, 892
PctI GAATGC 1 cut(s) 1438
PfeI GAWTC 5 cut(s) 279, 467, 685, 1219, 1231
PinAI ACCGGT 1 cut(s) 256
PkrI GCNGC 1 cut(s) 25
PleI GAGTC 2 cut(s) 727, 1370
PpsI GAGTC 2 cut(s) 727, 1370
Psp124BI GAGCTC 1 cut(s) 789
Psp6I CCWGG 2 cut(s) 418, 826
PspGI CCWGG 2 cut(s) 418, 826
PspN4I GGNNCC 5 cut(s) 54, 129, 445, 1295, 1396
PspPI GGNCC 2 cut(s) 444, 1294
PstNI CAGNNNCTG 1 cut(s) 29
PsuI RGATCY 1 cut(s) 610
RsaI GTAC 3 cut(s) 121, 807, 1086
RsaNI GTAC 3 cut(s) 120, 806, 1085
SacI GAGCTC 1 cut(s) 789
SacII CCGCGG 1 cut(s) 898
SatI GCNGC 1 cut(s) 24
Sau3AI GATC 4 cut(s) 523, 610, 1129, 1147
Sau96I GGNCC 2 cut(s) 444, 1294
SchI GAGTC 2 cut(s) 727, 1370
ScrFI CCNGG 4 cut(s) 420, 510, 511, 828
SduI GDGCHC 4 cut(s) 705, 789, 802, 1164
SfaNI GCATC 6 cut(s) 421, 445, 1015, 1319, 1341, 1429
Sfr303I CCGCGG 1 cut(s) 898
SgrBI CCGCGG 1 cut(s) 898
SinI GGWCC 2 cut(s) 444, 1294
SmaI CCCGGG 1 cut(s) 511
SmlI CTYRAG 3 cut(s) 386, 801, 1424
SmoI CTYRAG 3 cut(s) 386, 801, 1424
SsiI CCGC 6 cut(s) 50, 895, 897, 975, 1385, 1450
SspMI CTAG 4 cut(s) 551, 1197, 1347, 1388
SstI GAGCTC 1 cut(s) 789
StyD4I CCNGG 4 cut(s) 418, 508, 509, 826
TaaI ACNGT 3 cut(s) 124, 173, 521
TaiI ACGT 1 cut(s) 1419
TaqI TCGA 3 cut(s) 1242, 1254, 1379
TatI WGTACW 2 cut(s) 805, 1084
TfiI GAWTC 5 cut(s) 279, 467, 685, 1219, 1231
TscAI CASTG 2 cut(s) 203, 526
TseFI GTSAC 1 cut(s) 167
TseI GCWGC 1 cut(s) 23
Tsp45I GTSAC 1 cut(s) 167
TspDTI ATGAA 4 cut(s) 342, 668, 741, 1028
TspGWI ACGGA 2 cut(s) 318, 1032
TspMI CCCGGG 1 cut(s) 509
TspRI CASTG 2 cut(s) 203, 526
Vha464I CTTAAG 2 cut(s) 386, 1424
VpaK11BI GGWCC 2 cut(s) 444, 1294
XapI RAATTY 2 cut(s) 98, 710
XceI RCATGY 1 cut(s) 1276
XcmI CCANNNNNNNNNTGG 1 cut(s) 1304
XmaI CCCGGG 1 cut(s) 509
XspI CTAG 4 cut(s) 551, 1197, 1347, 1388
Zsp2I ATGCAT 1 cut(s) 1334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.