Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0012194

Physical Location & Seq

Genomic Coordinates Reverse (-)

21640139 .. 21640911

Gene Structure 773 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G259900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 687 bp

ATGTCTCTCAGAAAGCCCCCGCTTCCCCGTCTCCTTCTCGACAATGTCTCTTGCATGAGGAATGCCCAACAAATCTTGAGACATGTAAATGCCTCCATTCATGATGGTGGAGCACTTGTACTGATGGGCACTAATGGCTCAGGCAAGACTACCTTCCTGCGTATGTTGGCTGGATTTTCTCGTCCTTCAGCTGGTCAGGTCCTGTGGAACGGCCATGACATCACAGATTCAGGTGTTTTCCACCAGTACAAGCTTCAACTTAACTGGCTCTCCCTTAAAGATGCTGTGAAGGAGAAGTTCACAGTTCTGGACAATGTTCAGTGGTTTGAAGTTCTTGAAGGCAAGCAGGGGAATTCAATGCCAGCTTTGGAGCTGATGGGGCTTGGGAGACTGGCAAAGGAGAAAGCAAGAATGCTGTCTATGGGGCAGCGGAAAAGGCTGCAGCTCGCGAGGTTGCTGGCAATGGATAGGCCAATCTGGTTGCTTGATGAGCCTTCTGTTGCTTTGGACACTGAGGGGCTGAAGTTGCTTGAATATATCATTGCAGAGCATAGGAAGAAAGGTGGAATTGTGATTGTGGCAACACATCAGCCAATTGAGATTGAAGATGCCATGTATTTGAGGCTGCCACCTAGGTTCCCAAGGAGGATGACTCTGGTAGATATGCTTGATCGTTCGGATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran

Protein Analysis

229

Amino Acids

25.82

Weight (kDa)

9.67

Isoelectric Point (pI)

44.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012194)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63270
fragaria_vesca	FvH4_1g01200 FvH4_1g01200 FvH4_1g01210
malus_domestica	MD02G1010200.v1.1
prunus_persica	Prupe.7G259900_v2.0.a1
pyrus_communis	pycom02g00890 pycom15g13920
rosa_chinensis	RchiOBHm_Chr2g0086001
rosa_laevigata	RLG00000015733
rosa_multiflora	Rmu_sc0023469.1_g000002
rosa_roxburghii	Rroxscaffold_2G00154860
rosa_rugosa	Rorug01G0464900 Rorug05G0522600
rosa_samantha	Rh2AG014200 Rh2BG014700 Rh2CG015300 Rh2DG016600
rosa_wichuraiana	Rw2G001260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	449
AciI	CCGC	2 cut(s)	20, 430
AcoI	YGGCCR	1 cut(s)	211
AcsI	RAATTY	1 cut(s)	352
AcuI	CTGAAG	2 cut(s)	171, 542
AfaI	GTAC	2 cut(s)	120, 248
AfiI	CCNNNNNNNGG	1 cut(s)	191
AflIII	ACRYGT	1 cut(s)	82
AgsI	TTSAA	6 cut(s)	257, 329, 338, 357, 533, 605
AluBI	AGCT	5 cut(s)	191, 253, 365, 373, 445
AluI	AGCT	5 cut(s)	191, 253, 365, 373, 445
Alw21I	GWGCWC	1 cut(s)	115
Alw26I	GTCTC	5 cut(s)	9, 35, 52, 73, 382
AlwNI	CAGNNNCTG	1 cut(s)	202
AoxI	GGCC	2 cut(s)	211, 470
ApeKI	GCWGC	4 cut(s)	427, 439, 442, 625
ApoI	RAATTY	1 cut(s)	352
AspA2I	CCTAGG	1 cut(s)	632
AspS9I	GGNCC	1 cut(s)	199
AvaII	GGWCC	1 cut(s)	199
AvrII	CCTAGG	1 cut(s)	632
BaeGI	GKGCMC	1 cut(s)	131
Bbv12I	GWGCWC	1 cut(s)	115
BbvI	GCAGC	4 cut(s)	426, 439, 454, 612
BccI	CCATC	3 cut(s)	98, 118, 370
BceAI	ACGGC	1 cut(s)	226
BcoDI	GTCTC	5 cut(s)	9, 35, 52, 73, 382
BfaI	CTAG	1 cut(s)	633
BfmI	CTRYAG	1 cut(s)	440
BisI	GCNGC	4 cut(s)	428, 440, 443, 626
BlnI	CCTAGG	1 cut(s)	632
BlsI	GCNGC	4 cut(s)	429, 441, 444, 627
Bme18I	GGWCC	1 cut(s)	199
BmgT120I	GGNCC	1 cut(s)	199
BmiI	GGNNCC	1 cut(s)	638
BmsI	GCATC	2 cut(s)	271, 598
BplI	GAGNNNNNCTC	2 cut(s)	637, 669
Bpu10I	CCTNAGC	1 cut(s)	139
BpuEI	CTTGAG	1 cut(s)	97
BsaJI	CCNNGG	2 cut(s)	632, 641
BsaXI	ACNNNNNCTCC	4 cut(s)	102, 132, 254, 284
Bsc4I	CCNNNNNNNGG	1 cut(s)	191
Bse1I	ACTGG	3 cut(s)	244, 269, 396
Bse3DI	GCAATG	2 cut(s)	468, 540
BseDI	CCNNGG	2 cut(s)	632, 641
BseGI	GGATG	1 cut(s)	654
BseLI	CCNNNNNNNGG	1 cut(s)	191
BseMI	GCAATG	2 cut(s)	468, 540
BseMII	CTCAG	3 cut(s)	22, 153, 504
BseNI	ACTGG	3 cut(s)	244, 269, 396
BseSI	GKGCMC	1 cut(s)	131
BseXI	GCAGC	4 cut(s)	426, 439, 454, 612
Bsh1236I	CGCG	1 cut(s)	449
BshFI	GGCC	2 cut(s)	213, 472
BsiHKAI	GWGCWC	1 cut(s)	115
BslI	CCNNNNNNNGG	1 cut(s)	191
BsmAI	GTCTC	5 cut(s)	9, 35, 52, 73, 382
BsmBI	CGTCTC	1 cut(s)	35
BsmI	GAATGC	2 cut(s)	67, 417
BsnI	GGCC	2 cut(s)	213, 472
Bsp1286I	GDGCHC	2 cut(s)	115, 131
Bsp143I	GATC	1 cut(s)	670
Bsp68I	TCGCGA	1 cut(s)	449
BspACI	CCGC	2 cut(s)	20, 430
BspANI	GGCC	2 cut(s)	213, 472
BspCNI	CTCAG	3 cut(s)	21, 152, 505
BspFNI	CGCG	1 cut(s)	449
BspHI	TCATGA	1 cut(s)	100
BspLI	GGNNCC	1 cut(s)	638
BspMAI	CTGCAG	1 cut(s)	444
BsrDI	GCAATG	2 cut(s)	468, 540
BsrI	ACTGG	3 cut(s)	244, 269, 396
BssECI	CCNNGG	2 cut(s)	632, 641
BssMI	GATC	1 cut(s)	670
BssT1I	CCWWGG	2 cut(s)	632, 641
Bst4CI	ACNGT	1 cut(s)	304
BstC8I	GCNNGC	4 cut(s)	344, 363, 447, 459
BstDEI	CTNAG	3 cut(s)	8, 139, 513
BstF5I	GGATG	1 cut(s)	654
BstFNI	CGCG	1 cut(s)	449
BstKTI	GATC	1 cut(s)	673
BstMAI	GTCTC	5 cut(s)	9, 35, 52, 73, 382
BstMBI	GATC	1 cut(s)	670
BstMWI	GCNNNNNNNGC	5 cut(s)	135, 379, 436, 490, 526
BstNSI	RCATGY	1 cut(s)	86
BstSFI	CTRYAG	1 cut(s)	440
BstSLI	GKGCMC	1 cut(s)	131
BstUI	CGCG	1 cut(s)	449
BstV1I	GCAGC	4 cut(s)	426, 439, 454, 612
BsuRI	GGCC	2 cut(s)	213, 472
BtsCI	GGATG	1 cut(s)	654
BtsIMutI	CAGTG	2 cut(s)	326, 510
BtuMI	TCGCGA	1 cut(s)	449
Cac8I	GCNNGC	4 cut(s)	344, 363, 447, 459
CaiI	CAGNNNCTG	1 cut(s)	202
CciI	TCATGA	1 cut(s)	100
Cfr13I	GGNCC	1 cut(s)	199
Csp6I	GTAC	2 cut(s)	119, 247
CviAII	CATG	5 cut(s)	55, 83, 101, 215, 613
CviQI	GTAC	2 cut(s)	119, 247
DdeI	CTNAG	3 cut(s)	8, 139, 513
DpnI	GATC	1 cut(s)	672
DpnII	GATC	1 cut(s)	670
EaeI	YGGCCR	1 cut(s)	211
Eco130I	CCWWGG	2 cut(s)	632, 641
Eco47I	GGWCC	1 cut(s)	199
Eco57I	CTGAAG	2 cut(s)	171, 542
EcoO109I	RGGNCCY	1 cut(s)	199
EcoRI	GAATTC	1 cut(s)	352
EcoT14I	CCWWGG	2 cut(s)	632, 641
ErhI	CCWWGG	2 cut(s)	632, 641
Esp3I	CGTCTC	1 cut(s)	35
FaeI	CATG	5 cut(s)	58, 86, 104, 218, 616
FalI	AAGNNNNNCTT	2 cut(s)	137, 169
FatI	CATG	5 cut(s)	54, 82, 100, 214, 612
FauI	CCCGC	1 cut(s)	27
Fnu4HI	GCNGC	4 cut(s)	428, 440, 443, 626
FokI	GGATG	1 cut(s)	661
Fsp4HI	GCNGC	4 cut(s)	428, 440, 443, 626
FspBI	CTAG	1 cut(s)	633
GluI	GCNGC	4 cut(s)	428, 440, 443, 626
HaeIII	GGCC	2 cut(s)	213, 472
Hin1II	CATG	5 cut(s)	58, 86, 104, 218, 616
HindIII	AAGCTT	1 cut(s)	251
HinfI	GANTC	2 cut(s)	227, 652
Hpy166II	GTNNAC	1 cut(s)	300
Hpy188I	TCNGA	2 cut(s)	11, 679
Hpy188III	TCNNGA	6 cut(s)	38, 76, 101, 308, 335, 448
Hpy8I	GTNNAC	1 cut(s)	300
HpyAV	CCTTC	6 cut(s)	44, 163, 195, 283, 332, 504
HpyCH4III	ACNGT	1 cut(s)	304
HpyCH4V	TGCA	3 cut(s)	54, 442, 545
HpyF10VI	GCNNNNNNNGC	5 cut(s)	135, 379, 436, 490, 526
HpyF3I	CTNAG	3 cut(s)	8, 139, 513
Hsp92II	CATG	5 cut(s)	58, 86, 104, 218, 616
Kzo9I	GATC	1 cut(s)	670
LmnI	GCTCC	2 cut(s)	110, 370
Lsp1109I	GCAGC	4 cut(s)	426, 439, 454, 612
LweI	GCATC	2 cut(s)	271, 598
MaeI	CTAG	1 cut(s)	633
MalI	GATC	1 cut(s)	672
MboI	GATC	1 cut(s)	670
MboII	GAAGA	2 cut(s)	568, 617
MfeI	CAATTG	1 cut(s)	594
MhlI	GDGCHC	2 cut(s)	115, 131
MluCI	AATT	3 cut(s)	352, 567, 594
MlyI	GAGTC	1 cut(s)	646
MnlI	CCTC	6 cut(s)	51, 103, 444, 508, 615, 639
MseI	TTAA	2 cut(s)	261, 276
MslI	CAYNNNNRTG	2 cut(s)	87, 105
MspA1I	CMGCKG	2 cut(s)	191, 430
MunI	CAATTG	1 cut(s)	594
Mva1269I	GAATGC	2 cut(s)	67, 417
MvnI	CGCG	1 cut(s)	449
MwoI	GCNNNNNNNGC	5 cut(s)	135, 379, 436, 490, 526
NdeII	GATC	1 cut(s)	670
NlaIII	CATG	5 cut(s)	58, 86, 104, 218, 616
NlaIV	GGNNCC	1 cut(s)	638
NruI	TCGCGA	1 cut(s)	449
NspI	RCATGY	1 cut(s)	86
PagI	TCATGA	1 cut(s)	100
PciI	ACATGT	1 cut(s)	82
PctI	GAATGC	2 cut(s)	67, 417
PfeI	GAWTC	1 cut(s)	227
PflFI	GACNNNGTC	1 cut(s)	44
PkrI	GCNGC	4 cut(s)	429, 441, 444, 627
PleI	GAGTC	1 cut(s)	646
PpsI	GAGTC	1 cut(s)	646
PpuMI	RGGWCCY	1 cut(s)	199
PscI	ACATGT	1 cut(s)	82
Psp5II	RGGWCCY	1 cut(s)	199
PspN4I	GGNNCC	1 cut(s)	638
PspPI	GGNCC	1 cut(s)	199
PspPPI	RGGWCCY	1 cut(s)	199
PstI	CTGCAG	1 cut(s)	444
PstNI	CAGNNNCTG	1 cut(s)	202
PsyI	GACNNNGTC	1 cut(s)	44
PvuII	CAGCTG	1 cut(s)	191
RruI	TCGCGA	1 cut(s)	449
RsaI	GTAC	2 cut(s)	120, 248
RsaNI	GTAC	2 cut(s)	119, 247
RseI	CAYNNNNRTG	2 cut(s)	87, 105
SaqAI	TTAA	2 cut(s)	261, 276
SatI	GCNGC	4 cut(s)	428, 440, 443, 626
Sau3AI	GATC	1 cut(s)	670
Sau96I	GGNCC	1 cut(s)	199
SchI	GAGTC	1 cut(s)	646
SduI	GDGCHC	2 cut(s)	115, 131
SfaNI	GCATC	2 cut(s)	271, 598
SfcI	CTRYAG	1 cut(s)	440
SinI	GGWCC	1 cut(s)	199
SmiMI	CAYNNNNRTG	2 cut(s)	87, 105
SmlI	CTYRAG	1 cut(s)	76
SmoI	CTYRAG	1 cut(s)	76
Sse9I	AATT	3 cut(s)	352, 567, 594
SsiI	CCGC	2 cut(s)	20, 430
SspMI	CTAG	1 cut(s)	633
StyI	CCWWGG	2 cut(s)	632, 641
TaaI	ACNGT	1 cut(s)	304
TaqI	TCGA	1 cut(s)	39
TasI	AATT	3 cut(s)	352, 567, 594
TatI	WGTACW	2 cut(s)	118, 246
TfiI	GAWTC	1 cut(s)	227
Tru1I	TTAA	2 cut(s)	261, 276
Tru9I	TTAA	2 cut(s)	261, 276
TscAI	CASTG	2 cut(s)	326, 517
TseI	GCWGC	4 cut(s)	427, 439, 442, 625
TspDTI	ATGAA	1 cut(s)	89
TspRI	CASTG	2 cut(s)	326, 517
Tth111I	GACNNNGTC	1 cut(s)	44
VpaK11BI	GGWCC	1 cut(s)	199
XapI	RAATTY	1 cut(s)	352
XceI	RCATGY	1 cut(s)	86
XmaJI	CCTAGG	1 cut(s)	632
XspI	CTAG	1 cut(s)	633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.