Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0015191

Physical Location & Seq

Genomic Coordinates Forward (+)

571486 .. 572211

Gene Structure 726 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G007500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 705 bp

ATGGCGACAACTCACGCACGAGTCCCCGGCAAGCCAACCAAGACGGGCATGGCCATCCTCGAGACCGCAACAGCCACAGTCCAGAGCTTCAGCCCCATCAACAGCATCCACCAGCACCTCTGCGCCTTCCACTTGTACTCCCACGACATGACCCGTCAACTGGAAGCCCACCACTTCTGCGCCCACCAGAACAAAGAGATGCGCCAGTGCCTCATCTACGACAGCCCCAAGGCCGATGCAAAACTCATCGGCCTCGAGTACATCATCTCAGAGCTCCTCTTCCTCACCCTCCCCGACAACGAGAAGCCGCTTTGGCACTCGCATGAGTACGAGGTGAAGAGCGGCGTTCTCTTCATGCCGGGCCTACCGGGCCCCATCCAGAGGCAGGACCTGGACAAGGTGTGCAAGACGTACGGGAAGACGATTCATTTTTGGCAAGTGGATAGGGGGGATGAGTTGCCACTTGGGATTCCGCAGGTTATGTTGGCGTTGACCAGGGACGGTCAACTGCGGCTGGAGCTTGCGATAGATGTTCAGATGAGGTACGGGGTGAGCTTCGATGAGGAGAGAGAGAAGCGAGCTTACATGGAGGGGCCGAAGCTTGGGGTGCATCCTTTGGCTAATGGAGGAGGGAAAGGGTTGAAGACTGAGCTCAGGGAGACCGACTGCATGCCTGTAGATTCTGTTCCCAGGGTCTTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005811 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0010033 GO:0010154 GO:0010344 GO:0010876 GO:0019915 GO:0022414 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0042221 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044424 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051235 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1264

Protein Analysis

235

Amino Acids

26.43

Weight (kDa)

6.45

Isoelectric Point (pI)

35.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05510 AT2G31985
fragaria_vesca	FvH4_2g06270 FvH4_2g06270
malus_domestica	MD05G1004300.v1.1
prunus_persica	Prupe.8G007500_v2.0.a1
pyrus_communis	pycom05g00380
rosa_chinensis	RchiOBHm_Chr6g0256911
rosa_laevigata	RLG00000014656
rosa_multiflora	Rmu_sc0003076.1_g000030
rosa_roxburghii	Rroxscaffold_7G00208290
rosa_rugosa	Rorug05G0577000
rosa_samantha	Rh6AG095700 Rh6BG086500 Rh6DG078500
rosa_wichuraiana	Rw6G008150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	466
AccBSI	CCGCTC	1 cut(s)	342
AciI	CCGC	5 cut(s)	66, 308, 342, 473, 511
AcoI	YGGCCR	1 cut(s)	51
AcuI	CTGAAG	1 cut(s)	73
AfaI	GTAC	5 cut(s)	137, 260, 329, 413, 545
AfiI	CCNNNNNNNGG	5 cut(s)	160, 381, 385, 397, 602
AgsI	TTSAA	1 cut(s)	643
AjnI	CCWGG	3 cut(s)	390, 494, 689
AluBI	AGCT	7 cut(s)	87, 274, 520, 555, 581, 601, 652
AluI	AGCT	7 cut(s)	87, 274, 520, 555, 581, 601, 652
Alw21I	GWGCWC	2 cut(s)	276, 654
Alw26I	GTCTC	2 cut(s)	56, 653
AlwNI	CAGNNNCTG	1 cut(s)	391
Ama87I	CYCGRG	2 cut(s)	59, 254
AoxI	GGCC	6 cut(s)	51, 231, 250, 361, 370, 593
ApaI	GGGCCC	1 cut(s)	374
AspLEI	GCGC	3 cut(s)	125, 182, 204
AspS9I	GGNCC	5 cut(s)	361, 370, 371, 388, 593
AsuC2I	CCSGG	3 cut(s)	27, 360, 369
AsuHPI	GGTGA	3 cut(s)	277, 346, 562
AvaI	CYCGRG	2 cut(s)	59, 254
AvaII	GGWCC	1 cut(s)	388
BaeGI	GKGCMC	1 cut(s)	374
BalI	TGGCCA	1 cut(s)	53
BanII	GRGCYC	3 cut(s)	276, 374, 654
BarI	GAAGNNNNNNTAC	2 cut(s)	566, 598
BauI	CACGAG	1 cut(s)	18
BbsI	GAAGAC	2 cut(s)	425, 650
Bbv12I	GWGCWC	2 cut(s)	276, 654
BccI	CCATC	3 cut(s)	62, 104, 383
BciT130I	CCWGG	3 cut(s)	392, 496, 691
BcnI	CCSGG	3 cut(s)	27, 360, 369
BcoDI	GTCTC	2 cut(s)	56, 653
BfmI	CTRYAG	1 cut(s)	675
BfuAI	ACCTGC	1 cut(s)	466
BglI	GCCNNNNNGGC	2 cut(s)	313, 369
BisI	GCNGC	3 cut(s)	308, 343, 512
BlsI	GCNGC	3 cut(s)	309, 344, 513
Bme1390I	CCNGG	6 cut(s)	27, 360, 369, 392, 496, 691
Bme18I	GGWCC	1 cut(s)	388
BmeT110I	CYCGRG	2 cut(s)	59, 254
BmgT120I	GGNCC	5 cut(s)	361, 370, 371, 388, 593
BmiI	GGNNCC	3 cut(s)	372, 373, 594
BmrFI	CCNGG	6 cut(s)	27, 360, 369, 392, 496, 691
BmsI	GCATC	4 cut(s)	114, 189, 226, 619
BpiI	GAAGAC	2 cut(s)	425, 650
BpmI	CTGGAG	1 cut(s)	536
Bpu10I	CCTNAGC	1 cut(s)	653
BpuMI	CCSGG	3 cut(s)	27, 360, 369
BsaI	GGTCTC	2 cut(s)	56, 653
BsaJI	CCNNGG	5 cut(s)	25, 228, 495, 689, 690
BsaXI	ACNNNNNCTCC	2 cut(s)	122, 152
Bsc4I	CCNNNNNNNGG	5 cut(s)	160, 381, 385, 397, 602
Bse1I	ACTGG	2 cut(s)	165, 205
BseBI	CCWGG	3 cut(s)	392, 496, 691
BseDI	CCNNGG	5 cut(s)	25, 228, 495, 689, 690
BseGI	GGATG	5 cut(s)	54, 105, 375, 457, 610
BseLI	CCNNNNNNNGG	5 cut(s)	160, 381, 385, 397, 602
BseMII	CTCAG	3 cut(s)	282, 639, 667
BseNI	ACTGG	2 cut(s)	165, 205
BseRI	GAGGAG	3 cut(s)	266, 578, 642
BseSI	GKGCMC	1 cut(s)	374
BshFI	GGCC	6 cut(s)	53, 233, 252, 363, 372, 595
BsiHKAI	GWGCWC	2 cut(s)	276, 654
BsiHKCI	CYCGRG	2 cut(s)	59, 254
BsiSI	CCGG	3 cut(s)	27, 359, 368
BsiWI	CGTACG	1 cut(s)	411
BslFI	GGGAC	2 cut(s)	8, 512
BslI	CCNNNNNNNGG	5 cut(s)	160, 381, 385, 397, 602
BsmAI	GTCTC	2 cut(s)	56, 653
BsmFI	GGGAC	2 cut(s)	8, 512
BsnI	GGCC	6 cut(s)	53, 233, 252, 363, 372, 595
Bso31I	GGTCTC	2 cut(s)	56, 653
BsoBI	CYCGRG	2 cut(s)	59, 254
Bsp120I	GGGCCC	1 cut(s)	370
Bsp1286I	GDGCHC	3 cut(s)	276, 374, 654
BspACI	CCGC	5 cut(s)	66, 308, 342, 473, 511
BspANI	GGCC	6 cut(s)	53, 233, 252, 363, 372, 595
BspCNI	CTCAG	3 cut(s)	281, 640, 666
BspLI	GGNNCC	3 cut(s)	372, 373, 594
BspMI	ACCTGC	1 cut(s)	466
BspQI	GCTCTTC	1 cut(s)	332
BspTNI	GGTCTC	2 cut(s)	56, 653
BsrBI	CCGCTC	1 cut(s)	342
BsrI	ACTGG	2 cut(s)	165, 205
BssECI	CCNNGG	5 cut(s)	25, 228, 495, 689, 690
BssSI	CACGAG	1 cut(s)	18
BssT1I	CCWWGG	1 cut(s)	228
Bst2BI	CACGAG	1 cut(s)	18
Bst2UI	CCWGG	3 cut(s)	392, 496, 691
Bst4CI	ACNGT	2 cut(s)	79, 503
Bst6I	CTCTTC	3 cut(s)	284, 332, 356
BstC8I	GCNNGC	4 cut(s)	32, 522, 579, 671
BstDEI	CTNAG	3 cut(s)	268, 648, 653
BstENI	CCTNNNNNAGG	1 cut(s)	395
BstF5I	GGATG	5 cut(s)	54, 105, 375, 457, 610
BstHHI	GCGC	3 cut(s)	125, 182, 204
BstMAI	GTCTC	2 cut(s)	56, 653
BstMWI	GCNNNNNNNGC	4 cut(s)	313, 369, 517, 607
BstNI	CCWGG	3 cut(s)	392, 496, 691
BstNSI	RCATGY	1 cut(s)	673
BstSCI	CCNGG	6 cut(s)	25, 358, 367, 390, 494, 689
BstSFI	CTRYAG	1 cut(s)	675
BstSLI	GKGCMC	1 cut(s)	374
BstV2I	GAAGAC	2 cut(s)	425, 650
BsuRI	GGCC	6 cut(s)	53, 233, 252, 363, 372, 595
BtsCI	GGATG	5 cut(s)	54, 105, 375, 457, 610
BtsIMutI	CAGTG	1 cut(s)	212
BveI	ACCTGC	1 cut(s)	466
Cac8I	GCNNGC	4 cut(s)	32, 522, 579, 671
CaiI	CAGNNNCTG	1 cut(s)	391
CfoI	GCGC	3 cut(s)	125, 182, 204
Cfr13I	GGNCC	5 cut(s)	361, 370, 371, 388, 593
Csp6I	GTAC	5 cut(s)	136, 259, 328, 412, 544
CviAII	CATG	6 cut(s)	49, 148, 323, 355, 586, 670
CviQI	GTAC	5 cut(s)	136, 259, 328, 412, 544
DdeI	CTNAG	3 cut(s)	268, 648, 653
EaeI	YGGCCR	1 cut(s)	51
Eam1104I	CTCTTC	3 cut(s)	284, 332, 356
EarI	CTCTTC	3 cut(s)	284, 332, 356
Ecl136II	GAGCTC	2 cut(s)	274, 652
Eco130I	CCWWGG	1 cut(s)	228
Eco24I	GRGCYC	3 cut(s)	276, 374, 654
Eco31I	GGTCTC	2 cut(s)	56, 653
Eco47I	GGWCC	1 cut(s)	388
Eco53kI	GAGCTC	2 cut(s)	274, 652
Eco57I	CTGAAG	1 cut(s)	73
Eco88I	CYCGRG	2 cut(s)	59, 254
EcoICRI	GAGCTC	2 cut(s)	274, 652
EcoNI	CCTNNNNNAGG	1 cut(s)	395
EcoO109I	RGGNCCY	2 cut(s)	371, 388
EcoRII	CCWGG	3 cut(s)	390, 494, 689
EcoT14I	CCWWGG	1 cut(s)	228
EcoT38I	GRGCYC	3 cut(s)	276, 374, 654
ErhI	CCWWGG	1 cut(s)	228
FaeI	CATG	6 cut(s)	52, 151, 326, 358, 589, 673
FaiI	YATR	7 cut(s)	50, 149, 324, 356, 482, 587, 671
FaqI	GGGAC	2 cut(s)	8, 512
FatI	CATG	6 cut(s)	48, 147, 322, 354, 585, 669
Fnu4HI	GCNGC	3 cut(s)	308, 343, 512
FokI	GGATG	5 cut(s)	41, 92, 362, 464, 597
FriOI	GRGCYC	3 cut(s)	276, 374, 654
Fsp4HI	GCNGC	3 cut(s)	308, 343, 512
GlaI	GCGC	3 cut(s)	124, 181, 203
GluI	GCNGC	3 cut(s)	308, 343, 512
GsuI	CTGGAG	1 cut(s)	536
HaeIII	GGCC	6 cut(s)	53, 233, 252, 363, 372, 595
HapII	CCGG	3 cut(s)	27, 359, 368
HhaI	GCGC	3 cut(s)	125, 182, 204
Hin1II	CATG	6 cut(s)	52, 151, 326, 358, 589, 673
Hin6I	GCGC	3 cut(s)	123, 180, 202
HinP1I	GCGC	3 cut(s)	123, 180, 202
HincII	GTYRAC	3 cut(s)	158, 492, 506
HindII	GTYRAC	3 cut(s)	158, 492, 506
HindIII	AAGCTT	1 cut(s)	599
HinfI	GANTC	4 cut(s)	21, 424, 469, 680
HpaII	CCGG	3 cut(s)	27, 359, 368
HphI	GGTGA	3 cut(s)	277, 346, 562
Hpy166II	GTNNAC	3 cut(s)	158, 492, 506
Hpy188I	TCNGA	2 cut(s)	271, 537
Hpy188III	TCNNGA	3 cut(s)	61, 82, 379
Hpy8I	GTNNAC	3 cut(s)	158, 492, 506
HpyAV	CCTTC	1 cut(s)	136
HpyCH4III	ACNGT	2 cut(s)	79, 503
HpyCH4IV	ACGT	1 cut(s)	410
HpyCH4V	TGCA	4 cut(s)	239, 405, 610, 669
HpyF10VI	GCNNNNNNNGC	4 cut(s)	313, 369, 517, 607
HpyF3I	CTNAG	3 cut(s)	268, 648, 653
HpySE526I	ACGT	1 cut(s)	410
Hsp92II	CATG	6 cut(s)	52, 151, 326, 358, 589, 673
HspAI	GCGC	3 cut(s)	123, 180, 202
LguI	GCTCTTC	1 cut(s)	332
LmnI	GCTCC	2 cut(s)	279, 517
LweI	GCATC	4 cut(s)	114, 189, 226, 619
MaeII	ACGT	1 cut(s)	410
MbiI	CCGCTC	1 cut(s)	342
MboII	GAAGA	5 cut(s)	271, 343, 349, 430, 655
MhlI	GDGCHC	3 cut(s)	276, 374, 654
MlsI	TGGCCA	1 cut(s)	53
MluNI	TGGCCA	1 cut(s)	53
MlyI	GAGTC	1 cut(s)	30
Mox20I	TGGCCA	1 cut(s)	53
MscI	TGGCCA	1 cut(s)	53
MslI	CAYNNNNRTG	1 cut(s)	321
Msp20I	TGGCCA	1 cut(s)	53
MspI	CCGG	3 cut(s)	27, 359, 368
MspR9I	CCNGG	6 cut(s)	27, 360, 369, 392, 496, 691
MvaI	CCWGG	3 cut(s)	392, 496, 691
MwoI	GCNNNNNNNGC	4 cut(s)	313, 369, 517, 607
NciI	CCSGG	3 cut(s)	27, 360, 369
NlaIII	CATG	6 cut(s)	52, 151, 326, 358, 589, 673
NlaIV	GGNNCC	3 cut(s)	372, 373, 594
NspI	RCATGY	1 cut(s)	673
PaeI	GCATGC	1 cut(s)	673
PaeR7I	CTCGAG	2 cut(s)	59, 254
PasI	CCCWGGG	1 cut(s)	690
PciSI	GCTCTTC	1 cut(s)	332
PfeI	GAWTC	3 cut(s)	424, 469, 680
Pfl23II	CGTACG	1 cut(s)	411
PkrI	GCNGC	3 cut(s)	309, 344, 513
PleI	GAGTC	1 cut(s)	29
PpsI	GAGTC	1 cut(s)	29
PpuMI	RGGWCCY	1 cut(s)	388
Psp124BI	GAGCTC	2 cut(s)	276, 654
Psp5II	RGGWCCY	1 cut(s)	388
Psp6I	CCWGG	3 cut(s)	390, 494, 689
PspGI	CCWGG	3 cut(s)	390, 494, 689
PspLI	CGTACG	1 cut(s)	411
PspN4I	GGNNCC	3 cut(s)	372, 373, 594
PspOMI	GGGCCC	1 cut(s)	370
PspPI	GGNCC	5 cut(s)	361, 370, 371, 388, 593
PspPPI	RGGWCCY	1 cut(s)	388
PspXI	VCTCGAGB	1 cut(s)	254
PsrI	GAACNNNNNNTAC	2 cut(s)	669, 701
PstNI	CAGNNNCTG	1 cut(s)	391
RsaI	GTAC	5 cut(s)	137, 260, 329, 413, 545
RsaNI	GTAC	5 cut(s)	136, 259, 328, 412, 544
RseI	CAYNNNNRTG	1 cut(s)	321
SacI	GAGCTC	2 cut(s)	276, 654
SapI	GCTCTTC	1 cut(s)	332
SatI	GCNGC	3 cut(s)	308, 343, 512
Sau96I	GGNCC	5 cut(s)	361, 370, 371, 388, 593
SchI	GAGTC	1 cut(s)	30
ScrFI	CCNGG	6 cut(s)	27, 360, 369, 392, 496, 691
SduI	GDGCHC	3 cut(s)	276, 374, 654
SfaNI	GCATC	4 cut(s)	114, 189, 226, 619
SfcI	CTRYAG	1 cut(s)	675
SfiI	GGCCNNNNNGGCC	1 cut(s)	369
Sfr274I	CTCGAG	2 cut(s)	59, 254
SinI	GGWCC	1 cut(s)	388
SlaI	CTCGAG	2 cut(s)	59, 254
SmiMI	CAYNNNNRTG	1 cut(s)	321
SmlI	CTYRAG	2 cut(s)	59, 254
SmoI	CTYRAG	2 cut(s)	59, 254
SphI	GCATGC	1 cut(s)	673
SsiI	CCGC	5 cut(s)	66, 308, 342, 473, 511
SstI	GAGCTC	2 cut(s)	276, 654
StyD4I	CCNGG	6 cut(s)	25, 358, 367, 390, 494, 689
StyI	CCWWGG	1 cut(s)	228
TaaI	ACNGT	2 cut(s)	79, 503
TaiI	ACGT	1 cut(s)	413
TaqI	TCGA	3 cut(s)	60, 255, 558
TaqII	GACCGA	1 cut(s)	677
TatI	WGTACW	2 cut(s)	135, 258
TauI	GCSGC	3 cut(s)	310, 345, 514
TfiI	GAWTC	3 cut(s)	424, 469, 680
TscAI	CASTG	1 cut(s)	212
TspDTI	ATGAA	2 cut(s)	343, 416
TspRI	CASTG	1 cut(s)	212
VpaK11BI	GGWCC	1 cut(s)	388
XagI	CCTNNNNNAGG	1 cut(s)	395
XceI	RCATGY	1 cut(s)	673
XcmI	CCANNNNNNNNNTGG	1 cut(s)	46
XhoI	CTCGAG	2 cut(s)	59, 254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.