Prupe.8G044100_v2.0.a1

Protein of unknown function (DUF1475)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
4541460 .. 4548895
7436 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G044100.3

Sequence Viewer

Length: 783 bp
ATGGCGAATTCATTGGTGATTGGTTTAAGAATTCTGTTTGCGGCTTTAGGCTGTGTGATGGTCTTCACTCTCACTTACACTCTCTCCACCGATGGTCTTCCTTTTCGCAAGGATCTTCTTACTCCGTGGATGGCGGCAACCTTGGTTGATTTCTATATCAATGTTGTACCTTTGGCGGTTTGGATTTCCTACAAGGAGTCAAACTGGATTAGTGCAACACTATGGGTAATTCTGCTAGCATGTTTAGGAAGTATCACTACATGTGCCTACATTCTTTTACAATTCATGAAGCTATCGACTCAAGAATCGCAAGATCCCATGTACTATGTTCTGTTGCGACATTCAAACAAGTATGATATGGAAAATAAGAATAAGCTTTCCCCTGTTTGGATTGCAAGAGTCCTTTTTAGTGCTTTGGGTCTTTTGATGCTGGGTACTCTGCTATACACACTCTTGACAGATGGTACTCCTTTTCGCACAGAGCTTTTGACTCCGTGGATGACAGCAACACTAATCGACTTTTATATCAATGTTGTTGCTCTATCAGTTTGGGTTGCCTACAAAGAATCAAGTTGGATTACTGCAGTCCTTTGGATAATCTTTCTGATATGTTTTGGCAGCATTACCACATGTATCTACATTGTCCGGCAGCTGCTGGGGCTGGCATCCCAAGATCCAATCTACCTTGTTTTACTAAAAGGTGGTAGCAGCTTGCGTGTAGGATGTGTGAGCAAGAACATGGATACGAAGAACCAAAAAAAAGAAAGAAAAATGCAGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

261

Amino Acids

29.45

Weight (kDa)

8.97

Isoelectric Point (pI)

38.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 41, 134, 176
AclWI GGATC 3 cut(s) 120, 308, 668
AcsI RAATTY 2 cut(s) 7, 30
AfaI GTAC 4 cut(s) 168, 323, 436, 466
AfiI CCNNNNNNNGG 1 cut(s) 387
AflIII ACRYGT 2 cut(s) 260, 629
AgsI TTSAA 1 cut(s) 345
AluBI AGCT 5 cut(s) 292, 376, 484, 652, 711
AluI AGCT 5 cut(s) 292, 376, 484, 652, 711
AlwI GGATC 3 cut(s) 120, 308, 668
AlwNI CAGNNNCTG 1 cut(s) 655
ApeKI GCWGC 4 cut(s) 618, 649, 652, 708
ApoI RAATTY 2 cut(s) 7, 30
AsuHPI GGTGA 1 cut(s) 28
AsuNHI GCTAGC 1 cut(s) 235
BarI GAAGNNNNNNTAC 2 cut(s) 241, 273
BbsI GAAGAC 2 cut(s) 55, 89
BbvI GCAGC 4 cut(s) 630, 639, 661, 720
BccI CCATC 4 cut(s) 52, 86, 124, 455
BciVI GTATCC 1 cut(s) 736
BfaI CTAG 1 cut(s) 236
BfmI CTRYAG 1 cut(s) 582
BfuI GTATCC 1 cut(s) 736
BisI GCNGC 6 cut(s) 42, 135, 619, 650, 653, 709
BlsI GCNGC 6 cut(s) 43, 136, 620, 651, 654, 710
BmsI GCATC 2 cut(s) 417, 674
BmtI GCTAGC 1 cut(s) 239
BpiI GAAGAC 2 cut(s) 55, 89
BpuEI CTTGAG 1 cut(s) 285
BsaJI CCNNGG 3 cut(s) 125, 141, 494
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bsc4I CCNNNNNNNGG 1 cut(s) 387
Bse1I ACTGG 1 cut(s) 209
BseDI CCNNGG 3 cut(s) 125, 141, 494
BseGI GGATG 4 cut(s) 135, 504, 665, 728
BseLI CCNNNNNNNGG 1 cut(s) 387
BseNI ACTGG 1 cut(s) 209
BseXI GCAGC 4 cut(s) 630, 639, 661, 720
BseYI CCCAGC 2 cut(s) 430, 655
BsiSI CCGG 1 cut(s) 646
BslI CCNNNNNNNGG 1 cut(s) 387
Bsp143I GATC 3 cut(s) 112, 313, 673
BspACI CCGC 3 cut(s) 41, 134, 176
BspHI TCATGA 1 cut(s) 285
BspMAI CTGCAG 1 cut(s) 586
BspOI GCTAGC 1 cut(s) 239
BspPI GGATC 3 cut(s) 120, 308, 668
BsrI ACTGG 1 cut(s) 209
BssECI CCNNGG 3 cut(s) 125, 141, 494
BssMI GATC 3 cut(s) 112, 313, 673
BssT1I CCWWGG 1 cut(s) 141
BstC8I GCNNGC 3 cut(s) 237, 663, 713
BstDSI CCRYGG 2 cut(s) 125, 494
BstF5I GGATG 4 cut(s) 135, 504, 665, 728
BstKTI GATC 3 cut(s) 115, 316, 676
BstMBI GATC 3 cut(s) 112, 313, 673
BstMWI GCNNNNNNNGC 1 cut(s) 658
BstNSI RCATGY 3 cut(s) 243, 264, 633
BstSFI CTRYAG 1 cut(s) 582
BstV1I GCAGC 4 cut(s) 630, 639, 661, 720
BstV2I GAAGAC 2 cut(s) 55, 89
BstX2I RGATCY 3 cut(s) 112, 313, 673
BstYI RGATCY 3 cut(s) 112, 313, 673
BsuI GTATCC 1 cut(s) 736
BtgI CCRYGG 2 cut(s) 125, 494
BtsCI GGATG 4 cut(s) 135, 504, 665, 728
Cac8I GCNNGC 3 cut(s) 237, 663, 713
CaiI CAGNNNCTG 1 cut(s) 655
CciI TCATGA 1 cut(s) 285
Csp6I GTAC 4 cut(s) 167, 322, 435, 465
CviAII CATG 6 cut(s) 240, 261, 286, 319, 630, 739
CviJI RGCY 8 cut(s) 44, 51, 292, 376, 484, 652, 661, 711
CviKI_1 RGCY 8 cut(s) 44, 51, 292, 376, 484, 652, 661, 711
CviQI GTAC 4 cut(s) 167, 322, 435, 465
DpnI GATC 3 cut(s) 114, 315, 675
DpnII GATC 3 cut(s) 112, 313, 673
Eco130I CCWWGG 1 cut(s) 141
EcoRI GAATTC 2 cut(s) 7, 30
EcoT14I CCWWGG 1 cut(s) 141
ErhI CCWWGG 1 cut(s) 141
FaeI CATG 6 cut(s) 243, 264, 289, 322, 633, 742
FatI CATG 6 cut(s) 239, 260, 285, 318, 629, 738
Fnu4HI GCNGC 6 cut(s) 42, 135, 619, 650, 653, 709
FokI GGATG 4 cut(s) 142, 511, 652, 735
Fsp4HI GCNGC 6 cut(s) 42, 135, 619, 650, 653, 709
FspBI CTAG 1 cut(s) 236
GluI GCNGC 6 cut(s) 42, 135, 619, 650, 653, 709
GsaI CCCAGC 2 cut(s) 434, 659
HapII CCGG 1 cut(s) 646
Hin1II CATG 6 cut(s) 243, 264, 289, 322, 633, 742
HindIII AAGCTT 1 cut(s) 374
HinfI GANTC 6 cut(s) 197, 298, 305, 399, 490, 566
HpaII CCGG 1 cut(s) 646
HphI GGTGA 1 cut(s) 28
Hpy188I TCNGA 1 cut(s) 606
Hpy188III TCNNGA 3 cut(s) 286, 302, 454
HpyCH4V TGCA 4 cut(s) 215, 395, 584, 775
HpyF10VI GCNNNNNNNGC 1 cut(s) 658
Hsp92II CATG 6 cut(s) 243, 264, 289, 322, 633, 742
Kzo9I GATC 3 cut(s) 112, 313, 673
LpnPI CCDG 6 cut(s) 190, 396, 416, 641, 647, 659
Lsp1109I GCAGC 4 cut(s) 630, 639, 661, 720
LweI GCATC 2 cut(s) 417, 674
MaeI CTAG 1 cut(s) 236
MalI GATC 3 cut(s) 114, 315, 675
MboI GATC 3 cut(s) 112, 313, 673
MboII GAAGA 4 cut(s) 55, 89, 107, 760
MflI RGATCY 3 cut(s) 112, 313, 673
MluCI AATT 4 cut(s) 7, 30, 228, 281
MlyI GAGTC 4 cut(s) 206, 292, 408, 484
MmeI TCCRAC 1 cut(s) 554
MseI TTAA 1 cut(s) 26
MspA1I CMGCKG 1 cut(s) 652
MspI CCGG 1 cut(s) 646
MwoI GCNNNNNNNGC 1 cut(s) 658
NdeII GATC 3 cut(s) 112, 313, 673
NheI GCTAGC 1 cut(s) 235
NlaIII CATG 6 cut(s) 243, 264, 289, 322, 633, 742
NspI RCATGY 3 cut(s) 243, 264, 633
PagI TCATGA 1 cut(s) 285
PciI ACATGT 2 cut(s) 260, 629
PfeI GAWTC 2 cut(s) 305, 566
PkrI GCNGC 6 cut(s) 43, 136, 620, 651, 654, 710
PleI GAGTC 4 cut(s) 205, 292, 407, 484
PpsI GAGTC 4 cut(s) 205, 292, 407, 484
PscI ACATGT 2 cut(s) 260, 629
PspFI CCCAGC 2 cut(s) 430, 655
PstI CTGCAG 1 cut(s) 586
PstNI CAGNNNCTG 1 cut(s) 655
PsuI RGATCY 3 cut(s) 112, 313, 673
PvuII CAGCTG 1 cut(s) 652
RsaI GTAC 4 cut(s) 168, 323, 436, 466
RsaNI GTAC 4 cut(s) 167, 322, 435, 465
SaqAI TTAA 1 cut(s) 26
SatI GCNGC 6 cut(s) 42, 135, 619, 650, 653, 709
Sau3AI GATC 3 cut(s) 112, 313, 673
SchI GAGTC 4 cut(s) 206, 292, 408, 484
SetI ASST 9 cut(s) 143, 172, 294, 378, 486, 654, 687, 703, 713
SfaNI GCATC 2 cut(s) 417, 674
SfcI CTRYAG 1 cut(s) 582
SmlI CTYRAG 1 cut(s) 300
SmoI CTYRAG 1 cut(s) 300
Sse9I AATT 4 cut(s) 7, 30, 228, 281
SsiI CCGC 3 cut(s) 41, 134, 176
SspMI CTAG 1 cut(s) 236
StyI CCWWGG 1 cut(s) 141
TaqI TCGA 2 cut(s) 296, 516
TasI AATT 4 cut(s) 7, 30, 228, 281
TatI WGTACW 1 cut(s) 321
TauI GCSGC 2 cut(s) 44, 137
TfiI GAWTC 2 cut(s) 305, 566
Tru1I TTAA 1 cut(s) 26
Tru9I TTAA 1 cut(s) 26
TseI GCWGC 4 cut(s) 618, 649, 652, 708
TspDTI ATGAA 2 cut(s) 274, 302
TspGWI ACGGA 2 cut(s) 114, 483
XapI RAATTY 2 cut(s) 7, 30
XceI RCATGY 3 cut(s) 243, 264, 633
XspI CTAG 1 cut(s) 236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.