Prupe.8G062100_v2.0.a1

Annexin repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0016740
Physical Location & Seq
Reverse (-)
8916876 .. 8922517
5642 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G062100.1

Sequence Viewer

Length: 960 bp
ATGGCTACGTTTGCAGTACCGCAGCAGATCCCTCCGGTGGCTGAAGACTGTGAAAGGCTTCGTAAAGCTATGCAAGGGTGGGGAACAGATGAGAATGCGATCATATCCATATTGACCCATAGGAATGCGAGGCAACGATGTTTGATACGACAAACTTATGCTGAGAAATATGGAGAGGATTTTTTCAAACCTCTACAGGACGAACTTTCTGGTGACTTTTTGAGGGCAGTGCTTCTATGGACACCACATCCAGCTGAACGTGATGCATTGCTAGCTAATGAAGTTACCAAGAAGAAACATTCAGCTGCCCATAATCATTTGGTTATAATGGAAATAGCTTGTACAAGAACTTCGCGAGAGCTTTTCCAGGTGAGAGAAGATTATCATGCTCGCTACAAGAGATCTCTCGAAGAAGATATTGCTTACCACACAACTGGAGATTTTCGCAAGCTATTGGTACCTCTGGTGAGTACTTACAGGTACGAGGGAGGTGAGGTTGATATGACGGTGGCGAATTCAGAGGCTAACATACTTCAAGAGAAAATATCTGAAAAGGCTTATAATCATGATGAGCTCATCAGAATTCTAACTACTAGGAGCAAAGCACAACTGAATGCAACATTCAAAGTCTATAACGACCAATTTGGCCATCCTCTCAACAAGGACCTGAAGAAAAAGCCAAAGGATGAATACCTTGGGTTAGTGAGGGCCACCGTACAATGCTTGACATGCCCGGAAAAGTATTATGAGAAAGCTCTCCGGCTGTCGATGAAGGGCCTCGGAACGACGGAGGAGACTCTGACCAGAGTTGTAGTAACTCGAGCGGAGGTTGACATGAAGAGTATAATGGAACAGTATCAACTCAAGAATAGTGTCCCTTTGGTTCAGGACATAAAGAGTGATACTTCTGGGGACTACTTGGCCACGTTGCTTGCCTTGGTTGGTCAATCATCATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Annexin

Protein Analysis

320

Amino Acids

36.45

Weight (kDa)

7.12

Isoelectric Point (pI)

38.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016740)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26060
malus_domestica MD05G1045300.v1.1
prunus_persica Prupe.8G062100_v2.0.a1 Prupe.8G062100_v2.0.a1
pyrus_communis pycom05g03780
rosa_chinensis RchiOBHm_Chr3g0485531
rosa_laevigata RLG00000023145
rosa_roxburghii Rroxscaffold_6G00396670
rosa_rugosa Rorug03G0219800
rosa_samantha Rh3AG268300 Rh3BG304000 Rh3CG302300 Rh3DG298900
rosa_wichuraiana Rw3G023930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 326, 561
Acc65I GGTACC 1 cut(s) 457
AccB1I GGYRCC 1 cut(s) 457
AccBSI CCGCTC 1 cut(s) 824
AccII CGCG 1 cut(s) 355
AciI CCGC 2 cut(s) 20, 824
AclWI GGATC 1 cut(s) 22
AcoI YGGCCR 2 cut(s) 646, 921
AcsI RAATTY 2 cut(s) 514, 582
AcuI CTGAAG 2 cut(s) 63, 689
AfaI GTAC 6 cut(s) 18, 343, 459, 472, 482, 717
AfiI CCNNNNNNNGG 1 cut(s) 37
AgsI TTSAA 3 cut(s) 187, 536, 625
AjnI CCWGG 1 cut(s) 366
AluBI AGCT 9 cut(s) 68, 254, 275, 305, 338, 361, 451, 574, 755
AluI AGCT 9 cut(s) 68, 254, 275, 305, 338, 361, 451, 574, 755
Alw21I GWGCWC 1 cut(s) 576
Alw26I GTCTC 1 cut(s) 788
AlwI GGATC 1 cut(s) 22
Ama87I CYCGRG 1 cut(s) 819
AoxI GGCC 4 cut(s) 646, 708, 775, 921
ApeKI GCWGC 2 cut(s) 22, 305
ApoI RAATTY 2 cut(s) 514, 582
Asp700I GAANNNNTTC 1 cut(s) 57
Asp718I GGTACC 1 cut(s) 457
AspS9I GGNCC 3 cut(s) 664, 708, 775
AsuC2I CCSGG 1 cut(s) 734
AsuHPI GGTGA 4 cut(s) 224, 382, 478, 503
AsuNHI GCTAGC 1 cut(s) 271
AvaI CYCGRG 1 cut(s) 819
AvaII GGWCC 1 cut(s) 664
BalI TGGCCA 2 cut(s) 648, 923
BanI GGYRCC 1 cut(s) 457
BanII GRGCYC 1 cut(s) 576
BarI GAAGNNNNNNTAC 2 cut(s) 334, 366
BbsI GAAGAC 1 cut(s) 51
Bbv12I GWGCWC 1 cut(s) 576
BbvI GCAGC 2 cut(s) 34, 292
BccI CCATC 1 cut(s) 657
BciT130I CCWGG 1 cut(s) 368
BcnI CCSGG 1 cut(s) 734
BcoDI GTCTC 1 cut(s) 788
BfaI CTAG 2 cut(s) 272, 594
BfmI CTRYAG 1 cut(s) 194
BglII AGATCT 1 cut(s) 401
BisI GCNGC 2 cut(s) 23, 306
BlsI GCNGC 2 cut(s) 24, 307
BmcAI AGTACT 1 cut(s) 472
Bme1390I CCNGG 2 cut(s) 368, 734
Bme18I GGWCC 1 cut(s) 664
BmeT110I CYCGRG 1 cut(s) 819
BmgT120I GGNCC 3 cut(s) 664, 708, 775
BmiI GGNNCC 1 cut(s) 459
BmrFI CCNGG 2 cut(s) 368, 734
BmsI GCATC 1 cut(s) 253
BmtI GCTAGC 1 cut(s) 275
BpiI GAAGAC 1 cut(s) 51
BpmI CTGGAG 1 cut(s) 456
BpuEI CTTGAG 1 cut(s) 848
BpuMI CCSGG 1 cut(s) 734
BsaJI CCNNGG 3 cut(s) 694, 778, 936
BsaWI WCCGGW 1 cut(s) 34
BsaXI ACNNNNNCTCC 2 cut(s) 480, 510
Bsc4I CCNNNNNNNGG 1 cut(s) 37
Bse1I ACTGG 1 cut(s) 439
Bse3DI GCAATG 1 cut(s) 266
BseBI CCWGG 1 cut(s) 368
BseDI CCNNGG 3 cut(s) 694, 778, 936
BseGI GGATG 3 cut(s) 247, 649, 691
BseLI CCNNNNNNNGG 1 cut(s) 37
BseMI GCAATG 1 cut(s) 266
BseMII CTCAG 1 cut(s) 153
BseNI ACTGG 1 cut(s) 439
BseRI GAGGAG 1 cut(s) 806
BseXI GCAGC 2 cut(s) 34, 292
Bsh1236I CGCG 1 cut(s) 355
BshFI GGCC 4 cut(s) 648, 710, 777, 923
BshNI GGYRCC 1 cut(s) 457
BsiHKAI GWGCWC 1 cut(s) 576
BsiHKCI CYCGRG 1 cut(s) 819
BsiSI CCGG 3 cut(s) 35, 734, 760
BslFI GGGAC 2 cut(s) 860, 926
BslI CCNNNNNNNGG 1 cut(s) 37
BsmAI GTCTC 1 cut(s) 788
BsmFI GGGAC 2 cut(s) 860, 926
BsmI GAATGC 3 cut(s) 100, 130, 619
BsnI GGCC 4 cut(s) 648, 710, 777, 923
BsoBI CYCGRG 1 cut(s) 819
Bsp1286I GDGCHC 1 cut(s) 576
Bsp1407I TGTACA 1 cut(s) 341
Bsp143I GATC 3 cut(s) 27, 99, 401
Bsp68I TCGCGA 1 cut(s) 355
BspACI CCGC 2 cut(s) 20, 824
BspANI GGCC 4 cut(s) 648, 710, 777, 923
BspCNI CTCAG 1 cut(s) 154
BspFNI CGCG 1 cut(s) 355
BspHI TCATGA 2 cut(s) 565, 956
BspLI GGNNCC 1 cut(s) 459
BspOI GCTAGC 1 cut(s) 275
BspPI GGATC 1 cut(s) 22
BspT107I GGYRCC 1 cut(s) 457
BsrBI CCGCTC 1 cut(s) 824
BsrDI GCAATG 1 cut(s) 266
BsrGI TGTACA 1 cut(s) 341
BsrI ACTGG 1 cut(s) 439
BssECI CCNNGG 3 cut(s) 694, 778, 936
BssMI GATC 3 cut(s) 27, 99, 401
BssT1I CCWWGG 2 cut(s) 694, 936
Bst2UI CCWGG 1 cut(s) 368
Bst4CI ACNGT 4 cut(s) 50, 508, 715, 855
Bst6I CTCTTC 1 cut(s) 833
BstAUI TGTACA 1 cut(s) 341
BstC8I GCNNGC 4 cut(s) 273, 391, 449, 933
BstDEI CTNAG 1 cut(s) 162
BstF5I GGATG 3 cut(s) 247, 649, 691
BstFNI CGCG 1 cut(s) 355
BstKTI GATC 3 cut(s) 30, 102, 404
BstMAI GTCTC 1 cut(s) 788
BstMBI GATC 3 cut(s) 27, 99, 401
BstMWI GCNNNNNNNGC 3 cut(s) 11, 272, 729
BstNI CCWGG 1 cut(s) 368
BstNSI RCATGY 1 cut(s) 732
BstSCI CCNGG 2 cut(s) 366, 732
BstSFI CTRYAG 1 cut(s) 194
BstUI CGCG 1 cut(s) 355
BstV1I GCAGC 2 cut(s) 34, 292
BstV2I GAAGAC 1 cut(s) 51
BstX2I RGATCY 2 cut(s) 27, 401
BstXI CCANNNNNNTGG 1 cut(s) 434
BstYI RGATCY 2 cut(s) 27, 401
BsuRI GGCC 4 cut(s) 648, 710, 777, 923
BtsCI GGATG 3 cut(s) 247, 649, 691
BtsI GCAGTG 1 cut(s) 234
BtsIMutI CAGTG 1 cut(s) 234
BtuMI TCGCGA 1 cut(s) 355
Cac8I GCNNGC 4 cut(s) 273, 391, 449, 933
CciI TCATGA 2 cut(s) 565, 956
Cfr13I GGNCC 3 cut(s) 664, 708, 775
Csp6I GTAC 6 cut(s) 17, 342, 458, 471, 481, 716
CspCI CAANNNNNGTGG 2 cut(s) 913, 948
CviAII CATG 5 cut(s) 386, 566, 729, 835, 957
CviQI GTAC 6 cut(s) 17, 342, 458, 471, 481, 716
DdeI CTNAG 1 cut(s) 162
DpnI GATC 3 cut(s) 29, 101, 403
DpnII GATC 3 cut(s) 27, 99, 401
EaeI YGGCCR 2 cut(s) 646, 921
Eam1104I CTCTTC 1 cut(s) 833
EarI CTCTTC 1 cut(s) 833
Ecl136II GAGCTC 1 cut(s) 574
Eco130I CCWWGG 2 cut(s) 694, 936
Eco24I GRGCYC 1 cut(s) 576
Eco47I GGWCC 1 cut(s) 664
Eco53kI GAGCTC 1 cut(s) 574
Eco57I CTGAAG 2 cut(s) 63, 689
Eco88I CYCGRG 1 cut(s) 819
EcoICRI GAGCTC 1 cut(s) 574
EcoO109I RGGNCCY 2 cut(s) 664, 775
EcoRI GAATTC 2 cut(s) 514, 582
EcoRII CCWGG 1 cut(s) 366
EcoT14I CCWWGG 2 cut(s) 694, 936
EcoT22I ATGCAT 1 cut(s) 268
EcoT38I GRGCYC 1 cut(s) 576
ErhI CCWWGG 2 cut(s) 694, 936
FaeI CATG 5 cut(s) 389, 569, 732, 838, 960
FaqI GGGAC 2 cut(s) 860, 926
FatI CATG 5 cut(s) 385, 565, 728, 834, 956
Fnu4HI GCNGC 2 cut(s) 23, 306
FokI GGATG 3 cut(s) 234, 636, 698
FriOI GRGCYC 1 cut(s) 576
Fsp4HI GCNGC 2 cut(s) 23, 306
FspBI CTAG 2 cut(s) 272, 594
GluI GCNGC 2 cut(s) 23, 306
GsuI CTGGAG 1 cut(s) 456
HaeIII GGCC 4 cut(s) 648, 710, 777, 923
HapII CCGG 3 cut(s) 35, 734, 760
Hin1II CATG 5 cut(s) 389, 569, 732, 838, 960
HincII GTYRAC 1 cut(s) 832
HindII GTYRAC 1 cut(s) 832
HinfI GANTC 1 cut(s) 796
HpaII CCGG 3 cut(s) 35, 734, 760
HphI GGTGA 4 cut(s) 224, 382, 478, 503
Hpy166II GTNNAC 1 cut(s) 832
Hpy188I TCNGA 5 cut(s) 520, 550, 581, 782, 801
Hpy188III TCNNGA 7 cut(s) 354, 407, 536, 566, 865, 887, 957
Hpy8I GTNNAC 1 cut(s) 832
Hpy99I CGWCG 1 cut(s) 790
HpyAV CCTTC 1 cut(s) 766
HpyCH4III ACNGT 4 cut(s) 50, 508, 715, 855
HpyCH4IV ACGT 3 cut(s) 8, 259, 926
HpyCH4V TGCA 4 cut(s) 14, 73, 266, 617
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 272, 729
HpyF3I CTNAG 1 cut(s) 162
HpySE526I ACGT 3 cut(s) 8, 259, 926
Hsp92II CATG 5 cut(s) 389, 569, 732, 838, 960
KpnI GGTACC 1 cut(s) 461
Kzo9I GATC 3 cut(s) 27, 99, 401
LmnI GCTCC 1 cut(s) 597
Lsp1109I GCAGC 2 cut(s) 34, 292
LweI GCATC 1 cut(s) 253
MaeI CTAG 2 cut(s) 272, 594
MaeII ACGT 3 cut(s) 8, 259, 926
MaeIII GTNAC 3 cut(s) 212, 283, 814
MalI GATC 3 cut(s) 29, 101, 403
MbiI CCGCTC 1 cut(s) 824
MboI GATC 3 cut(s) 27, 99, 401
MboII GAAGA 7 cut(s) 56, 304, 389, 422, 425, 682, 850
MflI RGATCY 2 cut(s) 27, 401
MhlI GDGCHC 1 cut(s) 576
MlsI TGGCCA 2 cut(s) 648, 923
MluCI AATT 3 cut(s) 514, 582, 641
MluNI TGGCCA 2 cut(s) 648, 923
MlyI GAGTC 1 cut(s) 790
Mox20I TGGCCA 2 cut(s) 648, 923
Mph1103I ATGCAT 1 cut(s) 268
MroXI GAANNNNTTC 1 cut(s) 57
MscI TGGCCA 2 cut(s) 648, 923
MslI CAYNNNNRTG 2 cut(s) 123, 955
Msp20I TGGCCA 2 cut(s) 648, 923
MspA1I CMGCKG 2 cut(s) 254, 305
MspI CCGG 3 cut(s) 35, 734, 760
MspR9I CCNGG 2 cut(s) 368, 734
Mva1269I GAATGC 3 cut(s) 100, 130, 619
MvaI CCWGG 1 cut(s) 368
MvnI CGCG 1 cut(s) 355
MwoI GCNNNNNNNGC 3 cut(s) 11, 272, 729
NciI CCSGG 1 cut(s) 734
NdeII GATC 3 cut(s) 27, 99, 401
NheI GCTAGC 1 cut(s) 271
NlaIII CATG 5 cut(s) 389, 569, 732, 838, 960
NlaIV GGNNCC 1 cut(s) 459
NmuCI GTSAC 1 cut(s) 212
NruI TCGCGA 1 cut(s) 355
NsiI ATGCAT 1 cut(s) 268
NspI RCATGY 1 cut(s) 732
PaeR7I CTCGAG 1 cut(s) 819
PagI TCATGA 2 cut(s) 565, 956
PctI GAATGC 3 cut(s) 100, 130, 619
PdmI GAANNNNTTC 1 cut(s) 57
PkrI GCNGC 2 cut(s) 24, 307
PleI GAGTC 1 cut(s) 790
PpsI GAGTC 1 cut(s) 790
PpuMI RGGWCCY 1 cut(s) 664
PsiI TTATAA 2 cut(s) 326, 561
Psp124BI GAGCTC 1 cut(s) 576
Psp5II RGGWCCY 1 cut(s) 664
Psp6I CCWGG 1 cut(s) 366
PspGI CCWGG 1 cut(s) 366
PspN4I GGNNCC 1 cut(s) 459
PspPI GGNCC 3 cut(s) 664, 708, 775
PspPPI RGGWCCY 1 cut(s) 664
PspXI VCTCGAGB 1 cut(s) 819
PsuI RGATCY 2 cut(s) 27, 401
PvuII CAGCTG 2 cut(s) 254, 305
RruI TCGCGA 1 cut(s) 355
RsaI GTAC 6 cut(s) 18, 343, 459, 472, 482, 717
RsaNI GTAC 6 cut(s) 17, 342, 458, 471, 481, 716
RseI CAYNNNNRTG 2 cut(s) 123, 955
SacI GAGCTC 1 cut(s) 576
SatI GCNGC 2 cut(s) 23, 306
Sau3AI GATC 3 cut(s) 27, 99, 401
Sau96I GGNCC 3 cut(s) 664, 708, 775
ScaI AGTACT 1 cut(s) 472
SchI GAGTC 1 cut(s) 790
ScrFI CCNGG 2 cut(s) 368, 734
SduI GDGCHC 1 cut(s) 576
SfaNI GCATC 1 cut(s) 253
SfcI CTRYAG 1 cut(s) 194
Sfr274I CTCGAG 1 cut(s) 819
SinI GGWCC 1 cut(s) 664
SlaI CTCGAG 1 cut(s) 819
SmiMI CAYNNNNRTG 2 cut(s) 123, 955
SmlI CTYRAG 2 cut(s) 819, 863
SmoI CTYRAG 2 cut(s) 819, 863
Sse9I AATT 3 cut(s) 514, 582, 641
SsiI CCGC 2 cut(s) 20, 824
SspMI CTAG 2 cut(s) 272, 594
SstI GAGCTC 1 cut(s) 576
StyD4I CCNGG 2 cut(s) 366, 732
StyI CCWWGG 2 cut(s) 694, 936
TaaI ACNGT 4 cut(s) 50, 508, 715, 855
TaiI ACGT 3 cut(s) 11, 262, 929
TaqI TCGA 3 cut(s) 408, 767, 820
TasI AATT 3 cut(s) 514, 582, 641
TatI WGTACW 2 cut(s) 341, 470
TscAI CASTG 1 cut(s) 234
TseFI GTSAC 1 cut(s) 212
TseI GCWGC 2 cut(s) 22, 305
Tsp45I GTSAC 1 cut(s) 212
TspDTI ATGAA 4 cut(s) 294, 702, 785, 851
TspGWI ACGGA 1 cut(s) 803
TspRI CASTG 1 cut(s) 234
VpaK11BI GGWCC 1 cut(s) 664
XapI RAATTY 2 cut(s) 514, 582
XceI RCATGY 1 cut(s) 732
XhoI CTCGAG 1 cut(s) 819
XmnI GAANNNNTTC 1 cut(s) 57
XspI CTAG 2 cut(s) 272, 594
ZrmI AGTACT 1 cut(s) 472
Zsp2I ATGCAT 1 cut(s) 268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.