Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G10550 AT5G65630 |
| fragaria_vesca | FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 |
| malus_domestica | MD05G1049900.v1.1 MD10G1057000.v1.1 |
| prunus_persica | Prupe.8G075200_v2.0.a1 |
| pyrus_communis | pycom05g04180 pycom10g04390 |
| rosa_chinensis | RchiOBHm_Chr6g0269471 |
| rosa_laevigata | RLG00000013850 |
| rosa_roxburghii | Rroxscaffold_7G00198710 |
| rosa_rugosa | Rorug06G0048300 Rorug06G0048400 |
| rosa_samantha | Rh6AG168300 Rh6BG173600 Rh6CG167900 Rh6DG159900 |
| rosa_wichuraiana | Rw6G014490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1226 |
| Acc36I | ACCTGC | 2 cut(s) | 1201, 1441 |
| AccB1I | GGYRCC | 1 cut(s) | 662 |
| AccI | GTMKAC | 1 cut(s) | 600 |
| AccII | CGCG | 2 cut(s) | 215, 296 |
| AciI | CCGC | 8 cut(s) | 9, 44, 407, 502, 751, 995, 1286, 1360 |
| AclWI | GGATC | 3 cut(s) | 590, 663, 956 |
| AcoI | YGGCCR | 2 cut(s) | 41, 186 |
| AcsI | RAATTY | 4 cut(s) | 259, 487, 523, 1066 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 4 cut(s) | 267, 755, 945, 1059 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 59, 1039 |
| AflIII | ACRYGT | 1 cut(s) | 213 |
| AgeI | ACCGGT | 1 cut(s) | 1054 |
| AgsI | TTSAA | 8 cut(s) | 111, 151, 172, 289, 397, 589, 1102, 1249 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 214, 773 |
| AjnI | CCWGG | 1 cut(s) | 1084 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1151, 1183 |
| Alw21I | GWGCWC | 1 cut(s) | 1019 |
| Alw26I | GTCTC | 4 cut(s) | 510, 929, 1292, 1494 |
| AlwI | GGATC | 3 cut(s) | 590, 663, 956 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 829, 1655 |
| Ama87I | CYCGRG | 1 cut(s) | 54 |
| ApaI | GGGCCC | 1 cut(s) | 1085 |
| ApeKI | GCWGC | 6 cut(s) | 46, 49, 716, 1105, 1457, 1539 |
| ApoI | RAATTY | 4 cut(s) | 259, 487, 523, 1066 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 245, 277 |
| AsiGI | ACCGGT | 1 cut(s) | 1054 |
| AspLEI | GCGC | 1 cut(s) | 994 |
| AspS9I | GGNCC | 8 cut(s) | 94, 162, 271, 331, 1006, 1081, 1082, 1126 |
| AsuHPI | GGTGA | 4 cut(s) | 184, 1044, 1502, 1532 |
| AvaI | CYCGRG | 1 cut(s) | 54 |
| AvaII | GGWCC | 2 cut(s) | 94, 1126 |
| AxyI | CCTNAGG | 1 cut(s) | 1194 |
| BaeGI | GKGCMC | 1 cut(s) | 1085 |
| BanI | GGYRCC | 1 cut(s) | 662 |
| BanII | GRGCYC | 2 cut(s) | 1019, 1085 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 682, 714 |
| BauI | CACGAG | 2 cut(s) | 770, 1421 |
| BbsI | GAAGAC | 3 cut(s) | 210, 329, 677 |
| Bbv12I | GWGCWC | 1 cut(s) | 1019 |
| BbvI | GCAGC | 6 cut(s) | 58, 61, 703, 1117, 1469, 1551 |
| BccI | CCATC | 8 cut(s) | 240, 431, 842, 1042, 1198, 1250, 1336, 1366 |
| BceAI | ACGGC | 4 cut(s) | 173, 318, 688, 1081 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 698, 732 |
| BciT130I | CCWGG | 1 cut(s) | 1086 |
| BcoDI | GTCTC | 4 cut(s) | 510, 929, 1292, 1494 |
| BfaI | CTAG | 2 cut(s) | 350, 1702 |
| BfmI | CTRYAG | 2 cut(s) | 717, 1464 |
| BfoI | RGCGCY | 1 cut(s) | 995 |
| BfuAI | ACCTGC | 2 cut(s) | 1201, 1441 |
| Bme1390I | CCNGG | 1 cut(s) | 1086 |
| Bme18I | GGWCC | 2 cut(s) | 94, 1126 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 214, 773 |
| BmeT110I | CYCGRG | 1 cut(s) | 54 |
| BmgT120I | GGNCC | 8 cut(s) | 94, 162, 271, 331, 1006, 1081, 1082, 1126 |
| BmrFI | CCNGG | 1 cut(s) | 1086 |
| BmrI | ACTGGG | 2 cut(s) | 977, 1004 |
| BmuI | ACTGGG | 2 cut(s) | 977, 1004 |
| BpiI | GAAGAC | 3 cut(s) | 210, 329, 677 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1177, 1209 |
| BpmI | CTGGAG | 1 cut(s) | 1594 |
| Bpu10I | CCTNAGC | 4 cut(s) | 402, 963, 1110, 1122 |
| BpuEI | CTTGAG | 2 cut(s) | 353, 1585 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 2 cut(s) | 510, 1292 |
| BsaJI | CCNNGG | 6 cut(s) | 55, 651, 684, 763, 1084, 1116 |
| BsaWI | WCCGGW | 2 cut(s) | 24, 1054 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 59, 1039 |
| Bse118I | RCCGGY | 5 cut(s) | 159, 184, 386, 997, 1054 |
| Bse1I | ACTGG | 5 cut(s) | 596, 983, 1010, 1550, 1587 |
| Bse21I | CCTNAGG | 1 cut(s) | 1194 |
| Bse3DI | GCAATG | 1 cut(s) | 1401 |
| BseBI | CCWGG | 1 cut(s) | 1086 |
| BseDI | CCNNGG | 6 cut(s) | 55, 651, 684, 763, 1084, 1116 |
| BseGI | GGATG | 2 cut(s) | 1261, 1267 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 59, 1039 |
| BseMI | GCAATG | 1 cut(s) | 1401 |
| BseMII | CTCAG | 4 cut(s) | 219, 954, 1208, 1692 |
| BseNI | ACTGG | 5 cut(s) | 596, 983, 1010, 1550, 1587 |
| BseRI | GAGGAG | 5 cut(s) | 78, 827, 893, 1169, 1624 |
| BseSI | GKGCMC | 1 cut(s) | 1085 |
| BseX3I | CGGCCG | 1 cut(s) | 186 |
| BseXI | GCAGC | 6 cut(s) | 58, 61, 703, 1117, 1469, 1551 |
| BseYI | CCCAGC | 1 cut(s) | 443 |
| BsgI | GTGCAG | 1 cut(s) | 1238 |
| Bsh1236I | CGCG | 2 cut(s) | 215, 296 |
| Bsh1285I | CGRYCG | 2 cut(s) | 189, 860 |
| BshNI | GGYRCC | 1 cut(s) | 662 |
| BshTI | ACCGGT | 1 cut(s) | 1054 |
| BsiEI | CGRYCG | 2 cut(s) | 189, 860 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1019 |
| BsiHKCI | CYCGRG | 1 cut(s) | 54 |
| BsiSI | CCGG | 9 cut(s) | 25, 69, 75, 160, 185, 387, 914, 998, 1055 |
| BslFI | GGGAC | 1 cut(s) | 80 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 59, 1039 |
| BsmAI | GTCTC | 4 cut(s) | 510, 929, 1292, 1494 |
| BsmBI | CGTCTC | 1 cut(s) | 1494 |
| BsmFI | GGGAC | 1 cut(s) | 80 |
| BsmI | GAATGC | 2 cut(s) | 363, 748 |
| Bso31I | GGTCTC | 2 cut(s) | 510, 1292 |
| BsoBI | CYCGRG | 1 cut(s) | 54 |
| Bsp120I | GGGCCC | 1 cut(s) | 1081 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1019, 1085 |
| Bsp143I | GATC | 7 cut(s) | 222, 239, 582, 655, 790, 948, 1315 |
| Bsp19I | CCATGG | 1 cut(s) | 651 |
| Bsp68I | TCGCGA | 1 cut(s) | 296 |
| BspACI | CCGC | 8 cut(s) | 9, 44, 407, 502, 751, 995, 1286, 1360 |
| BspCNI | CTCAG | 4 cut(s) | 218, 955, 1207, 1691 |
| BspFNI | CGCG | 2 cut(s) | 215, 296 |
| BspMAI | CTGCAG | 1 cut(s) | 721 |
| BspMI | ACCTGC | 2 cut(s) | 1201, 1441 |
| BspPI | GGATC | 3 cut(s) | 590, 663, 956 |
| BspT107I | GGYRCC | 1 cut(s) | 662 |
| BspTNI | GGTCTC | 2 cut(s) | 510, 1292 |
| BsrDI | GCAATG | 1 cut(s) | 1401 |
| BsrFI | RCCGGY | 5 cut(s) | 159, 184, 386, 997, 1054 |
| BsrI | ACTGG | 5 cut(s) | 596, 983, 1010, 1550, 1587 |
| BssAI | RCCGGY | 5 cut(s) | 159, 184, 386, 997, 1054 |
| BssECI | CCNNGG | 6 cut(s) | 55, 651, 684, 763, 1084, 1116 |
| BssMI | GATC | 7 cut(s) | 222, 239, 582, 655, 790, 948, 1315 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 2 cut(s) | 770, 1421 |
| BssT1I | CCWWGG | 4 cut(s) | 651, 684, 763, 1116 |
| Bst2BI | CACGAG | 2 cut(s) | 770, 1421 |
| Bst2UI | CCWGG | 1 cut(s) | 1086 |
| Bst4CI | ACNGT | 3 cut(s) | 116, 122, 667 |
| Bst6I | CTCTTC | 1 cut(s) | 1226 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1189, 1216 |
| BstC8I | GCNNGC | 6 cut(s) | 186, 298, 388, 576, 888, 1365 |
| BstDEI | CTNAG | 9 cut(s) | 16, 205, 402, 963, 1110, 1122, 1194, 1678, 1695 |
| BstDSI | CCRYGG | 1 cut(s) | 651 |
| BstF5I | GGATG | 2 cut(s) | 1261, 1267 |
| BstFNI | CGCG | 2 cut(s) | 215, 296 |
| BstH2I | RGCGCY | 1 cut(s) | 995 |
| BstHHI | GCGC | 1 cut(s) | 994 |
| BstKTI | GATC | 7 cut(s) | 225, 242, 585, 658, 793, 951, 1318 |
| BstMAI | GTCTC | 4 cut(s) | 510, 929, 1292, 1494 |
| BstMBI | GATC | 7 cut(s) | 222, 239, 582, 655, 790, 948, 1315 |
| BstMCI | CGRYCG | 2 cut(s) | 189, 860 |
| BstNI | CCWGG | 1 cut(s) | 1086 |
| BstNSI | RCATGY | 1 cut(s) | 1531 |
| BstSCI | CCNGG | 1 cut(s) | 1084 |
| BstSFI | CTRYAG | 2 cut(s) | 717, 1464 |
| BstSLI | GKGCMC | 1 cut(s) | 1085 |
| BstUI | CGCG | 2 cut(s) | 215, 296 |
| BstV1I | GCAGC | 6 cut(s) | 58, 61, 703, 1117, 1469, 1551 |
| BstV2I | GAAGAC | 3 cut(s) | 210, 329, 677 |
| BstX2I | RGATCY | 2 cut(s) | 582, 655 |
| BstYI | RGATCY | 2 cut(s) | 582, 655 |
| BstZI | CGGCCG | 1 cut(s) | 186 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1194 |
| BtgI | CCRYGG | 1 cut(s) | 651 |
| BtgZI | GCGATG | 2 cut(s) | 218, 277 |
| BtsCI | GGATG | 2 cut(s) | 1261, 1267 |
| BtsI | GCAGTG | 1 cut(s) | 1630 |
| BtsIMutI | CAGTG | 2 cut(s) | 1017, 1630 |
| BtuMI | TCGCGA | 1 cut(s) | 296 |
| BveI | ACCTGC | 2 cut(s) | 1201, 1441 |
| Cac8I | GCNNGC | 6 cut(s) | 186, 298, 388, 576, 888, 1365 |
| CaiI | CAGNNNCTG | 2 cut(s) | 829, 1655 |
| CfoI | GCGC | 1 cut(s) | 994 |
| Cfr10I | RCCGGY | 5 cut(s) | 159, 184, 386, 997, 1054 |
| Cfr13I | GGNCC | 8 cut(s) | 94, 162, 271, 331, 1006, 1081, 1082, 1126 |
| CseI | GACGC | 2 cut(s) | 204, 221 |
| Csp6I | GTAC | 4 cut(s) | 266, 754, 944, 1058 |
| CspAI | ACCGGT | 1 cut(s) | 1054 |
| CviAII | CATG | 7 cut(s) | 85, 256, 579, 652, 905, 1528, 1583 |
| CviQI | GTAC | 4 cut(s) | 266, 754, 944, 1058 |
| DdeI | CTNAG | 9 cut(s) | 16, 205, 402, 963, 1110, 1122, 1194, 1678, 1695 |
| DpnI | GATC | 7 cut(s) | 224, 241, 584, 657, 792, 950, 1317 |
| DpnII | GATC | 7 cut(s) | 222, 239, 582, 655, 790, 948, 1315 |
| DriI | GACNNNNNGTC | 2 cut(s) | 214, 773 |
| EaeI | YGGCCR | 2 cut(s) | 41, 186 |
| EagI | CGGCCG | 1 cut(s) | 186 |
| Eam1104I | CTCTTC | 1 cut(s) | 1226 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 214, 773 |
| EarI | CTCTTC | 1 cut(s) | 1226 |
| Ecl136II | GAGCTC | 1 cut(s) | 1017 |
| EclXI | CGGCCG | 1 cut(s) | 186 |
| Eco130I | CCWWGG | 4 cut(s) | 651, 684, 763, 1116 |
| Eco24I | GRGCYC | 2 cut(s) | 1019, 1085 |
| Eco31I | GGTCTC | 2 cut(s) | 510, 1292 |
| Eco47I | GGWCC | 2 cut(s) | 94, 1126 |
| Eco52I | CGGCCG | 1 cut(s) | 186 |
| Eco53kI | GAGCTC | 1 cut(s) | 1017 |
| Eco81I | CCTNAGG | 1 cut(s) | 1194 |
| Eco88I | CYCGRG | 1 cut(s) | 54 |
| EcoICRI | GAGCTC | 1 cut(s) | 1017 |
| EcoO109I | RGGNCCY | 4 cut(s) | 94, 1006, 1081, 1126 |
| EcoRI | GAATTC | 1 cut(s) | 1066 |
| EcoRII | CCWGG | 1 cut(s) | 1084 |
| EcoT14I | CCWWGG | 4 cut(s) | 651, 684, 763, 1116 |
| EcoT38I | GRGCYC | 2 cut(s) | 1019, 1085 |
| ErhI | CCWWGG | 4 cut(s) | 651, 684, 763, 1116 |
| Esp3I | CGTCTC | 1 cut(s) | 1494 |
| FaeI | CATG | 7 cut(s) | 88, 259, 582, 655, 908, 1531, 1586 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 83, 115 |
| FaqI | GGGAC | 1 cut(s) | 80 |
| FatI | CATG | 7 cut(s) | 84, 255, 578, 651, 904, 1527, 1582 |
| FblI | GTMKAC | 1 cut(s) | 600 |
| FokI | GGATG | 2 cut(s) | 1268, 1274 |
| FriOI | GRGCYC | 2 cut(s) | 1019, 1085 |
| FspBI | CTAG | 2 cut(s) | 350, 1702 |
| GlaI | GCGC | 1 cut(s) | 993 |
| GsaI | CCCAGC | 1 cut(s) | 447 |
| GsuI | CTGGAG | 1 cut(s) | 1594 |
| HaeII | RGCGCY | 1 cut(s) | 995 |
| HapII | CCGG | 9 cut(s) | 25, 69, 75, 160, 185, 387, 914, 998, 1055 |
| HgaI | GACGC | 2 cut(s) | 204, 221 |
| HhaI | GCGC | 1 cut(s) | 994 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 7 cut(s) | 88, 259, 582, 655, 908, 1531, 1586 |
| Hin6I | GCGC | 1 cut(s) | 992 |
| HinP1I | GCGC | 1 cut(s) | 992 |
| HincII | GTYRAC | 1 cut(s) | 601 |
| HindII | GTYRAC | 1 cut(s) | 601 |
| HpaII | CCGG | 9 cut(s) | 25, 69, 75, 160, 185, 387, 914, 998, 1055 |
| HphI | GGTGA | 4 cut(s) | 184, 1044, 1502, 1532 |
| Hpy166II | GTNNAC | 2 cut(s) | 601, 1513 |
| Hpy188I | TCNGA | 7 cut(s) | 208, 346, 831, 862, 874, 1651, 1681 |
| Hpy188III | TCNNGA | 8 cut(s) | 295, 306, 370, 623, 643, 843, 952, 1196 |
| Hpy8I | GTNNAC | 2 cut(s) | 601, 1513 |
| Hpy99I | CGWCG | 2 cut(s) | 215, 605 |
| HpyAV | CCTTC | 1 cut(s) | 85 |
| HpyCH4III | ACNGT | 3 cut(s) | 116, 122, 667 |
| HpyCH4IV | ACGT | 2 cut(s) | 279, 603 |
| HpyCH4V | TGCA | 7 cut(s) | 719, 886, 1045, 1183, 1219, 1436, 1457 |
| HpyF3I | CTNAG | 9 cut(s) | 16, 205, 402, 963, 1110, 1122, 1194, 1678, 1695 |
| HpySE526I | ACGT | 2 cut(s) | 279, 603 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 7 cut(s) | 88, 259, 582, 655, 908, 1531, 1586 |
| HspAI | GCGC | 1 cut(s) | 992 |
| KroI | GCCGGC | 2 cut(s) | 184, 386 |
| KroNI | GCCGGC | 2 cut(s) | 186, 388 |
| Kzo9I | GATC | 7 cut(s) | 222, 239, 582, 655, 790, 948, 1315 |
| LmnI | GCTCC | 8 cut(s) | 65, 71, 313, 322, 346, 1207, 1309, 1613 |
| Lsp1109I | GCAGC | 6 cut(s) | 58, 61, 703, 1117, 1469, 1551 |
| MaeI | CTAG | 2 cut(s) | 350, 1702 |
| MaeII | ACGT | 2 cut(s) | 279, 603 |
| MaeIII | GTNAC | 7 cut(s) | 116, 122, 190, 607, 1050, 1324, 1673 |
| MalI | GATC | 7 cut(s) | 224, 241, 584, 657, 792, 950, 1317 |
| MboI | GATC | 7 cut(s) | 222, 239, 582, 655, 790, 948, 1315 |
| MfeI | CAATTG | 2 cut(s) | 37, 1330 |
| MflI | RGATCY | 2 cut(s) | 582, 655 |
| MhlI | GDGCHC | 2 cut(s) | 1019, 1085 |
| MluI | ACGCGT | 1 cut(s) | 213 |
| MlyI | GAGTC | 2 cut(s) | 188, 1670 |
| MmeI | TCCRAC | 2 cut(s) | 840, 1434 |
| MroNI | GCCGGC | 2 cut(s) | 184, 386 |
| MseI | TTAA | 1 cut(s) | 1356 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1532 |
| MspI | CCGG | 9 cut(s) | 25, 69, 75, 160, 185, 387, 914, 998, 1055 |
| MspR9I | CCNGG | 1 cut(s) | 1086 |
| MunI | CAATTG | 2 cut(s) | 37, 1330 |
| Mva1269I | GAATGC | 2 cut(s) | 363, 748 |
| MvaI | CCWGG | 1 cut(s) | 1086 |
| MvnI | CGCG | 2 cut(s) | 215, 296 |
| NaeI | GCCGGC | 2 cut(s) | 186, 388 |
| NcoI | CCATGG | 1 cut(s) | 651 |
| NdeII | GATC | 7 cut(s) | 222, 239, 582, 655, 790, 948, 1315 |
| NgoMIV | GCCGGC | 2 cut(s) | 184, 386 |
| NlaIII | CATG | 7 cut(s) | 88, 259, 582, 655, 908, 1531, 1586 |
| NmuCI | GTSAC | 5 cut(s) | 190, 607, 1050, 1324, 1673 |
| NruI | TCGCGA | 1 cut(s) | 296 |
| NspI | RCATGY | 1 cut(s) | 1531 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 387, 630 |
| PctI | GAATGC | 2 cut(s) | 363, 748 |
| PdiI | GCCGGC | 2 cut(s) | 186, 388 |
| PfeI | GAWTC | 9 cut(s) | 81, 358, 373, 378, 482, 646, 676, 1646, 1652 |
| PinAI | ACCGGT | 1 cut(s) | 1054 |
| PleI | GAGTC | 2 cut(s) | 187, 1670 |
| PpsI | GAGTC | 2 cut(s) | 187, 1670 |
| PpuMI | RGGWCCY | 2 cut(s) | 94, 1126 |
| PsiI | TTATAA | 1 cut(s) | 1226 |
| Psp124BI | GAGCTC | 1 cut(s) | 1019 |
| Psp5II | RGGWCCY | 2 cut(s) | 94, 1126 |
| Psp6I | CCWGG | 1 cut(s) | 1084 |
| PspFI | CCCAGC | 1 cut(s) | 443 |
| PspGI | CCWGG | 1 cut(s) | 1084 |
| PspOMI | GGGCCC | 1 cut(s) | 1081 |
| PspPI | GGNCC | 8 cut(s) | 94, 162, 271, 331, 1006, 1081, 1082, 1126 |
| PspPPI | RGGWCCY | 2 cut(s) | 94, 1126 |
| PstI | CTGCAG | 1 cut(s) | 721 |
| PstNI | CAGNNNCTG | 2 cut(s) | 829, 1655 |
| PsuI | RGATCY | 2 cut(s) | 582, 655 |
| RruI | TCGCGA | 1 cut(s) | 296 |
| RsaI | GTAC | 4 cut(s) | 267, 755, 945, 1059 |
| RsaNI | GTAC | 4 cut(s) | 266, 754, 944, 1058 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1532 |
| SacI | GAGCTC | 1 cut(s) | 1019 |
| SalI | GTCGAC | 1 cut(s) | 599 |
| SaqAI | TTAA | 1 cut(s) | 1356 |
| Sau3AI | GATC | 7 cut(s) | 222, 239, 582, 655, 790, 948, 1315 |
| Sau96I | GGNCC | 8 cut(s) | 94, 162, 271, 331, 1006, 1081, 1082, 1126 |
| SchI | GAGTC | 2 cut(s) | 188, 1670 |
| ScrFI | CCNGG | 1 cut(s) | 1086 |
| SduI | GDGCHC | 2 cut(s) | 1019, 1085 |
| SfcI | CTRYAG | 2 cut(s) | 717, 1464 |
| SinI | GGWCC | 2 cut(s) | 94, 1126 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1532 |
| SmlI | CTYRAG | 2 cut(s) | 368, 1600 |
| SmoI | CTYRAG | 2 cut(s) | 368, 1600 |
| SsiI | CCGC | 8 cut(s) | 9, 44, 407, 502, 751, 995, 1286, 1360 |
| SspMI | CTAG | 2 cut(s) | 350, 1702 |
| SstI | GAGCTC | 1 cut(s) | 1019 |
| StyD4I | CCNGG | 1 cut(s) | 1084 |
| StyI | CCWWGG | 4 cut(s) | 651, 684, 763, 1116 |
| TaaI | ACNGT | 3 cut(s) | 116, 122, 667 |
| TaiI | ACGT | 2 cut(s) | 282, 606 |
| TaqII | GACCGA | 1 cut(s) | 846 |
| TauI | GCSGC | 4 cut(s) | 46, 409, 997, 1363 |
| TfiI | GAWTC | 9 cut(s) | 81, 358, 373, 378, 482, 646, 676, 1646, 1652 |
| Tru1I | TTAA | 1 cut(s) | 1356 |
| Tru9I | TTAA | 1 cut(s) | 1356 |
| TscAI | CASTG | 2 cut(s) | 1017, 1630 |
| TseFI | GTSAC | 5 cut(s) | 190, 607, 1050, 1324, 1673 |
| TseI | GCWGC | 6 cut(s) | 46, 49, 716, 1105, 1457, 1539 |
| Tsp45I | GTSAC | 5 cut(s) | 190, 607, 1050, 1324, 1673 |
| TspDTI | ATGAA | 5 cut(s) | 73, 272, 545, 578, 1653 |
| TspGWI | ACGGA | 3 cut(s) | 489, 961, 1075 |
| TspRI | CASTG | 2 cut(s) | 1017, 1630 |
| VpaK11BI | GGWCC | 2 cut(s) | 94, 1126 |
| XapI | RAATTY | 4 cut(s) | 259, 487, 523, 1066 |
| XceI | RCATGY | 1 cut(s) | 1531 |
| XmiI | GTMKAC | 1 cut(s) | 600 |
| XspI | CTAG | 2 cut(s) | 350, 1702 |