Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008456

Physical Location & Seq

Genomic Coordinates Reverse (-)

42916759 .. 42918731

Gene Structure 1973 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013850

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGGCGTCCGCCGTCTTAGCGAATCGGAACGAACCCAATTGGCCACAGCAGCCCAGAGGCGGCGGCGGAGGCGGAGGATTCATGGGAAAAGTCCCTTTCTCAAACCCTAACCGTAACAACCCTAACCCTAAGACCAAATTCCAGGCTCACCATCATCATCATCATGCCGCCGATTTCAATGACGAGTCACCCGCCGTGACCCAGACGGCGTCCGACGACGCTTCGTCGATCAACCACCATCGGCGATCAAACACAACGAACACCGCCGCTGCCGATTTCAACCTCATTCAGTCCCAATACGTCAGCTTCAACATCGCAACATATTCAAGAAAAGAGCTCGTCGAGCTCAAGAATCGCCTTCTCTCTGAGCTCGACCAGATTCGTGTGCTCAAGAATCGAATCGAAGCCGGCGACTTCAACCCCAGGCCGGCCCAGCTCAAAAAGCCCAACACCACCAAGAAGATTGCCGGCTCGAAGCGGCCCTTGCCGATCGCCCCCGGCAAGGATTCGAATTCCAATTTAAAGCGATCGCATTCGGAGAATGCCAATTTGATGAAGAATTGCGGGCAGATTTTGTCCAAGCTGATGAAGCACAAGCACGCCTGGATCTTCAAAAAGCCGGTTGATGTGGTGACAATGAAGCTTCATGATTACTATGATATAATCAAGCACCCCATGGATCTGGGCACTGTCAAAACGAATCTATCCAAGAATATGTATTTGACGCCATTGGAATTTGCTGCTGATGTGCGATTGACCTTTGAAAATGCCATGCGGTATAATCCCCGAGGCCATGATGTCTACAACTACGCCAATCAGCTTCGTTCTTTGTTTGAGGAGCTCTTCCAGCCCCTGATTGACAAATTGGGGGATGGGTTTGGTGGGGATCGAGGAGCTTCCGATGAGGAGGAATTGCAGGCCAGTTCTTGGAACCATGTTGAGCATCCTCCTCCTCCGCCCAGGAGGGAAGACCCAATGCCCATGAAGATCGATAAGAAGACTGAGGTGGTTCGGCCCCCTCCGGCTCCAACCCCAGCTCCAGTCCCAGCCCCAGCCCCAGTGAGCTCATCAAATCCACCATTAGCTAATTCTCCAGTGAGGACAAGTTCGCAAGTGAAGGGGCCGCCGCAAGTGAAGCCCTTAAAGCAGCCGAAGCCAAAAGCAAAGGACCCAAACAAGAGGGATATGAGCATGGAGGAGAAGCATAAGCTGGGACTTGGGTTGCAGAGCTTGCCTCAGGAGAAAATGGAGCAAGTTGTGCAGATTATTAGAAAGAGGAATGGGCATTTAAAGCAGGATGGGGATGAGATTGAGCTTGACATTGAGGCTGTCGATACAGAAACCCTTTGGGAGCTTGATCGGCTGGTTACAAATTATAAAAAGATGGTTAGCAAGATTAAGCGTCAAGCACTGATGGGCAACAACAGCAATAGCAACATTGCTTCGAACAGAGGAGGTCAAGAGGAATTGCCTGCCAGTGAGAAAATTGATGTCTCAGCAGCAGAGCCGAAGAGGCCAAAGAAAGGGGAAGTGGGAGATGAAGATGTGGATATTGGTGATGACATGCCAATGAGCAGCTTTCCTCCGGTTGAGATTGAGAAAGATGTTGGGGGCAATGCCAGTAGTGATAATAGTTCCAGCAGCTCCGGCAGTTCAAGCAGTGGCTCCTCCTCATCAAGCGATTCAGATTCTGGCAGTTCTTCAGGGAGTGACTCGGATGATGATAACGCGCAGTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0007275 GO:0007346 GO:0008150 GO:0009292 GO:0009294 GO:0009987 GO:0022622 GO:0032501 GO:0032502 GO:0044764 GO:0045787 GO:0045931 GO:0048364 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051704 GO:0051726 GO:0065007 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

580

Amino Acids

63.66

Weight (kDa)

7.8

Isoelectric Point (pI)

58.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	188 - 272	2.7e-21	Bromodomain
BET	PF17035	396 - 457	1.2e-21	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10550 AT5G65630
fragaria_vesca	FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150
malus_domestica	MD05G1049900.v1.1 MD10G1057000.v1.1
prunus_persica	Prupe.8G075200_v2.0.a1
pyrus_communis	pycom05g04180 pycom10g04390
rosa_chinensis	RchiOBHm_Chr6g0269471
rosa_laevigata	RLG00000013850
rosa_roxburghii	Rroxscaffold_7G00198710
rosa_rugosa	Rorug06G0048300 Rorug06G0048400
rosa_samantha	Rh6AG168300 Rh6BG173600 Rh6CG167900 Rh6DG159900
rosa_wichuraiana	Rw6G014490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1377
AccB7I	CCANNNNNTGG	1 cut(s)	927
AccI	GTMKAC	1 cut(s)	801
AccII	CGCG	1 cut(s)	1730
AclWI	GGATC	3 cut(s)	614, 687, 894
AcoI	YGGCCR	1 cut(s)	41
AcsI	RAATTY	3 cut(s)	137, 511, 734
AcuI	CTGAAG	1 cut(s)	1686
AcyI	GRCGYC	3 cut(s)	5, 209, 725
AfiI	CCNNNNNNNGG	5 cut(s)	59, 427, 502, 927, 1523
AgsI	TTSAA	8 cut(s)	178, 280, 310, 327, 418, 613, 764, 1656
AhdI	GACNNNNNGTC	1 cut(s)	223
AjnI	CCWGG	4 cut(s)	141, 422, 602, 959
Alw21I	GWGCWC	6 cut(s)	339, 348, 372, 390, 843, 1067
Alw26I	GTCTC	1 cut(s)	1498
AlwI	GGATC	3 cut(s)	614, 687, 894
AlwNI	CAGNNNCTG	2 cut(s)	853, 1691
Ama87I	CYCGRG	1 cut(s)	786
AoxI	GGCC	9 cut(s)	41, 425, 429, 479, 790, 918, 1013, 1121, 1514
ApeKI	GCWGC	7 cut(s)	49, 269, 740, 1147, 1499, 1575, 1641
ApoI	RAATTY	3 cut(s)	137, 511, 734
AsiSI	GCGATCGC	1 cut(s)	530
AspLEI	GCGC	1 cut(s)	1732
AspS9I	GGNCC	5 cut(s)	430, 480, 1014, 1121, 1168
AsuC2I	CCSGG	1 cut(s)	498
AsuHPI	GGTGA	4 cut(s)	140, 180, 643, 1568
AsuII	TTCGAA	2 cut(s)	509, 1445
AvaI	CYCGRG	1 cut(s)	786
AvaII	GGWCC	1 cut(s)	1168
AxyI	CCTNAGG	1 cut(s)	1236
BaeGI	GKGCMC	1 cut(s)	689
BalI	TGGCCA	1 cut(s)	43
BanII	GRGCYC	5 cut(s)	339, 348, 372, 843, 1067
BbsI	GAAGAC	2 cut(s)	975, 1004
Bbv12I	GWGCWC	6 cut(s)	339, 348, 372, 390, 843, 1067
BbvI	GCAGC	7 cut(s)	61, 256, 727, 1159, 1511, 1587, 1653
BccI	CCATC	6 cut(s)	159, 246, 866, 1292, 1378, 1408
BceAI	ACGGC	2 cut(s)	179, 222
BciT130I	CCWGG	4 cut(s)	143, 424, 604, 961
BcnI	CCSGG	1 cut(s)	498
BcoDI	GTCTC	1 cut(s)	1498
BfaI	CTAG	1 cut(s)	1738
BglI	GCCNNNNNGGC	1 cut(s)	1513
Bme1390I	CCNGG	5 cut(s)	143, 424, 498, 604, 961
Bme18I	GGWCC	1 cut(s)	1168
BmeRI	GACNNNNNGTC	1 cut(s)	223
BmeT110I	CYCGRG	1 cut(s)	786
BmgT120I	GGNCC	5 cut(s)	430, 480, 1014, 1121, 1168
BmiI	GGNNCC	6 cut(s)	932, 1016, 1026, 1122, 1170, 1666
BmrFI	CCNGG	5 cut(s)	143, 424, 498, 604, 961
BmrI	ACTGGG	1 cut(s)	1052
BmsI	GCATC	1 cut(s)	952
BmuI	ACTGGG	1 cut(s)	1052
BpiI	GAAGAC	2 cut(s)	975, 1004
BplI	GAGNNNNNCTC	2 cut(s)	1219, 1251
BpmI	CTGGAG	2 cut(s)	1023, 1077
Bpu14I	TTCGAA	2 cut(s)	509, 1445
BpuEI	CTTGAG	2 cut(s)	332, 374
BpuMI	CCSGG	1 cut(s)	498
Bsa29I	ATCGAT	1 cut(s)	990
BsaHI	GRCGYC	3 cut(s)	5, 209, 725
BsaJI	CCNNGG	5 cut(s)	422, 496, 675, 787, 959
BsaWI	WCCGGW	1 cut(s)	1585
BsaXI	ACNNNNNCTCC	2 cut(s)	1021, 1051
Bsc4I	CCNNNNNNNGG	5 cut(s)	59, 427, 502, 927, 1523
Bse118I	RCCGGY	4 cut(s)	407, 427, 467, 619
Bse1I	ACTGG	6 cut(s)	921, 1040, 1058, 1094, 1476, 1620
Bse21I	CCTNAGG	1 cut(s)	1236
Bse3DI	GCAATG	2 cut(s)	1437, 1621
BseBI	CCWGG	4 cut(s)	143, 424, 604, 961
BseCI	ATCGAT	1 cut(s)	990
BseDI	CCNNGG	5 cut(s)	422, 496, 675, 787, 959
BseGI	GGATG	5 cut(s)	877, 943, 1303, 1309, 1723
BseLI	CCNNNNNNNGG	5 cut(s)	59, 427, 502, 927, 1523
BseMI	GCAATG	2 cut(s)	1437, 1621
BseMII	CTCAG	4 cut(s)	357, 993, 1250, 1509
BseNI	ACTGG	6 cut(s)	921, 1040, 1058, 1094, 1476, 1620
BseRI	GAGGAG	9 cut(s)	851, 906, 920, 939, 942, 1211, 1467, 1657, 1660
BseSI	GKGCMC	1 cut(s)	689
BseXI	GCAGC	7 cut(s)	61, 256, 727, 1159, 1511, 1587, 1653
BseYI	CCCAGC	5 cut(s)	432, 1033, 1045, 1051, 1210
BsgI	GTGCAG	1 cut(s)	1280
Bsh1236I	CGCG	1 cut(s)	1730
Bsh1285I	CGRYCG	2 cut(s)	492, 530
BshFI	GGCC	9 cut(s)	43, 427, 431, 481, 792, 920, 1015, 1123, 1516
BshVI	ATCGAT	1 cut(s)	990
BsiEI	CGRYCG	2 cut(s)	492, 530
BsiHKAI	GWGCWC	6 cut(s)	339, 348, 372, 390, 843, 1067
BsiHKCI	CYCGRG	1 cut(s)	786
BsiSI	CCGG	8 cut(s)	408, 428, 468, 498, 620, 1022, 1586, 1647
BslFI	GGGAC	4 cut(s)	77, 277, 1028, 1227
BslI	CCNNNNNNNGG	5 cut(s)	59, 427, 502, 927, 1523
BsmAI	GTCTC	1 cut(s)	1498
BsmFI	GGGAC	4 cut(s)	77, 277, 1028, 1227
BsmI	GAATGC	2 cut(s)	532, 547
BsnI	GGCC	9 cut(s)	43, 427, 431, 481, 792, 920, 1015, 1123, 1516
BsoBI	CYCGRG	1 cut(s)	786
Bsp119I	TTCGAA	2 cut(s)	509, 1445
Bsp1286I	GDGCHC	7 cut(s)	339, 348, 372, 390, 689, 843, 1067
Bsp143I	GATC	9 cut(s)	228, 245, 489, 527, 606, 679, 886, 987, 1357
Bsp19I	CCATGG	1 cut(s)	675
BspANI	GGCC	9 cut(s)	43, 427, 431, 481, 792, 920, 1015, 1123, 1516
BspCNI	CTCAG	4 cut(s)	358, 994, 1249, 1508
BspDI	ATCGAT	1 cut(s)	990
BspFNI	CGCG	1 cut(s)	1730
BspHI	TCATGA	1 cut(s)	646
BspLI	GGNNCC	6 cut(s)	932, 1016, 1026, 1122, 1170, 1666
BspPI	GGATC	3 cut(s)	614, 687, 894
BspQI	GCTCTTC	1 cut(s)	848
BspT104I	TTCGAA	2 cut(s)	509, 1445
BsrDI	GCAATG	2 cut(s)	1437, 1621
BsrFI	RCCGGY	4 cut(s)	407, 427, 467, 619
BsrI	ACTGG	6 cut(s)	921, 1040, 1058, 1094, 1476, 1620
BssAI	RCCGGY	4 cut(s)	407, 427, 467, 619
BssECI	CCNNGG	5 cut(s)	422, 496, 675, 787, 959
BssMI	GATC	9 cut(s)	228, 245, 489, 527, 606, 679, 886, 987, 1357
BssNI	GRCGYC	3 cut(s)	5, 209, 725
BssT1I	CCWWGG	1 cut(s)	675
Bst2UI	CCWGG	4 cut(s)	143, 424, 604, 961
Bst4CI	ACNGT	2 cut(s)	113, 691
Bst6I	CTCTTC	2 cut(s)	848, 1505
BstACI	GRCGYC	3 cut(s)	5, 209, 725
BstAPI	GCANNNNNTGC	2 cut(s)	1231, 1258
BstBI	TTCGAA	2 cut(s)	509, 1445
BstC8I	GCNNGC	8 cut(s)	409, 429, 469, 566, 600, 918, 1232, 1473
BstDEI	CTNAG	6 cut(s)	16, 129, 366, 1002, 1236, 1495
BstDSI	CCRYGG	1 cut(s)	675
BstF5I	GGATG	5 cut(s)	877, 943, 1303, 1309, 1723
BstFNI	CGCG	1 cut(s)	1730
BstHHI	GCGC	1 cut(s)	1732
BstKTI	GATC	9 cut(s)	231, 248, 492, 530, 609, 682, 889, 990, 1360
BstMAI	GTCTC	1 cut(s)	1498
BstMBI	GATC	9 cut(s)	228, 245, 489, 527, 606, 679, 886, 987, 1357
BstMCI	CGRYCG	2 cut(s)	492, 530
BstNI	CCWGG	4 cut(s)	143, 424, 604, 961
BstNSI	RCATGY	1 cut(s)	1567
BstSCI	CCNGG	5 cut(s)	141, 422, 496, 602, 959
BstSLI	GKGCMC	1 cut(s)	689
BstUI	CGCG	1 cut(s)	1730
BstV1I	GCAGC	7 cut(s)	61, 256, 727, 1159, 1511, 1587, 1653
BstV2I	GAAGAC	2 cut(s)	975, 1004
BstX2I	RGATCY	2 cut(s)	606, 679
BstXI	CCANNNNNNTGG	1 cut(s)	682
BstYI	RGATCY	2 cut(s)	606, 679
Bsu15I	ATCGAT	1 cut(s)	990
Bsu36I	CCTNAGG	1 cut(s)	1236
BsuRI	GGCC	9 cut(s)	43, 427, 431, 481, 792, 920, 1015, 1123, 1516
BsuTUI	ATCGAT	1 cut(s)	990
BtgI	CCRYGG	1 cut(s)	675
BtgZI	GCGATG	1 cut(s)	298
BtsCI	GGATG	5 cut(s)	877, 943, 1303, 1309, 1723
BtsI	GCAGTG	1 cut(s)	1666
BtsIMutI	CAGTG	6 cut(s)	687, 1065, 1101, 1409, 1483, 1666
Cac8I	GCNNGC	8 cut(s)	409, 429, 469, 566, 600, 918, 1232, 1473
CaiI	CAGNNNCTG	2 cut(s)	853, 1691
CciI	TCATGA	1 cut(s)	646
CfoI	GCGC	1 cut(s)	1732
Cfr10I	RCCGGY	4 cut(s)	407, 427, 467, 619
Cfr13I	GGNCC	5 cut(s)	430, 480, 1014, 1121, 1168
ClaI	ATCGAT	1 cut(s)	990
CseI	GACGC	4 cut(s)	198, 227, 733, 1391
DdeI	CTNAG	6 cut(s)	16, 129, 366, 1002, 1236, 1495
DpnI	GATC	9 cut(s)	230, 247, 491, 529, 608, 681, 888, 989, 1359
DpnII	GATC	9 cut(s)	228, 245, 489, 527, 606, 679, 886, 987, 1357
DraI	TTTAAA	2 cut(s)	522, 1290
DriI	GACNNNNNGTC	1 cut(s)	223
EaeI	YGGCCR	1 cut(s)	41
Eam1104I	CTCTTC	2 cut(s)	848, 1505
Eam1105I	GACNNNNNGTC	1 cut(s)	223
EarI	CTCTTC	2 cut(s)	848, 1505
EciI	GGCGGA	3 cut(s)	81, 87, 945
Ecl136II	GAGCTC	5 cut(s)	337, 346, 370, 841, 1065
Eco130I	CCWWGG	1 cut(s)	675
Eco24I	GRGCYC	5 cut(s)	339, 348, 372, 843, 1067
Eco47I	GGWCC	1 cut(s)	1168
Eco53kI	GAGCTC	5 cut(s)	337, 346, 370, 841, 1065
Eco57I	CTGAAG	1 cut(s)	1686
Eco81I	CCTNAGG	1 cut(s)	1236
Eco88I	CYCGRG	1 cut(s)	786
EcoICRI	GAGCTC	5 cut(s)	337, 346, 370, 841, 1065
EcoO109I	RGGNCCY	1 cut(s)	1168
EcoRI	GAATTC	1 cut(s)	511
EcoRII	CCWGG	4 cut(s)	141, 422, 602, 959
EcoT14I	CCWWGG	1 cut(s)	675
EcoT38I	GRGCYC	5 cut(s)	339, 348, 372, 843, 1067
ErhI	CCWWGG	1 cut(s)	675
FalI	AAGNNNNNCTT	2 cut(s)	467, 499
FaqI	GGGAC	4 cut(s)	77, 277, 1028, 1227
FauI	CCCGC	2 cut(s)	199, 557
FblI	GTMKAC	1 cut(s)	801
FokI	GGATG	5 cut(s)	884, 930, 1310, 1316, 1730
FriOI	GRGCYC	5 cut(s)	339, 348, 372, 843, 1067
FseI	GGCCGGCC	1 cut(s)	431
FspBI	CTAG	1 cut(s)	1738
GlaI	GCGC	1 cut(s)	1731
GsaI	CCCAGC	5 cut(s)	436, 1037, 1049, 1055, 1214
GsuI	CTGGAG	2 cut(s)	1023, 1077
HaeIII	GGCC	9 cut(s)	43, 427, 431, 481, 792, 920, 1015, 1123, 1516
HapII	CCGG	8 cut(s)	408, 428, 468, 498, 620, 1022, 1586, 1647
HgaI	GACGC	4 cut(s)	198, 227, 733, 1391
HhaI	GCGC	1 cut(s)	1732
Hin1I	GRCGYC	3 cut(s)	5, 209, 725
Hin6I	GCGC	1 cut(s)	1730
HinP1I	GCGC	1 cut(s)	1730
HindIII	AAGCTT	1 cut(s)	641
HpaII	CCGG	8 cut(s)	408, 428, 468, 498, 620, 1022, 1586, 1647
HphI	GGTGA	4 cut(s)	140, 180, 643, 1568
Hpy166II	GTNNAC	1 cut(s)	802
Hpy188I	TCNGA	7 cut(s)	27, 214, 367, 538, 901, 1687, 1717
Hpy188III	TCNNGA	6 cut(s)	327, 349, 391, 647, 1238, 1460
Hpy8I	GTNNAC	1 cut(s)	802
Hpy99I	CGWCG	4 cut(s)	218, 221, 229, 344
HpyAV	CCTTC	2 cut(s)	368, 1111
HpyCH4III	ACNGT	2 cut(s)	113, 691
HpyCH4IV	ACGT	1 cut(s)	300
HpyCH4V	TGCA	3 cut(s)	916, 1225, 1261
HpyF3I	CTNAG	6 cut(s)	16, 129, 366, 1002, 1236, 1495
HpySE526I	ACGT	1 cut(s)	300
Hsp92I	GRCGYC	3 cut(s)	5, 209, 725
HspAI	GCGC	1 cut(s)	1730
KroI	GCCGGC	3 cut(s)	407, 427, 467
KroNI	GCCGGC	3 cut(s)	409, 429, 469
Kzo9I	GATC	9 cut(s)	228, 245, 489, 527, 606, 679, 886, 987, 1357
LguI	GCTCTTC	1 cut(s)	848
LmnI	GCTCC	8 cut(s)	838, 893, 1030, 1042, 1249, 1351, 1649, 1670
Lsp1109I	GCAGC	7 cut(s)	61, 256, 727, 1159, 1511, 1587, 1653
LweI	GCATC	1 cut(s)	952
MaeI	CTAG	1 cut(s)	1738
MaeII	ACGT	1 cut(s)	300
MaeIII	GTNAC	6 cut(s)	113, 186, 196, 631, 1366, 1709
MalI	GATC	9 cut(s)	230, 247, 491, 529, 608, 681, 888, 989, 1359
MboI	GATC	9 cut(s)	228, 245, 489, 527, 606, 679, 886, 987, 1357
MfeI	CAATTG	1 cut(s)	37
MflI	RGATCY	2 cut(s)	606, 679
MhlI	GDGCHC	7 cut(s)	339, 348, 372, 390, 689, 843, 1067
MlsI	TGGCCA	1 cut(s)	43
MluNI	TGGCCA	1 cut(s)	43
MlyI	GAGTC	2 cut(s)	194, 1706
MmeI	TCCRAC	2 cut(s)	237, 1052
Mox20I	TGGCCA	1 cut(s)	43
MroNI	GCCGGC	3 cut(s)	407, 427, 467
MscI	TGGCCA	1 cut(s)	43
MseI	TTAA	4 cut(s)	521, 1142, 1289, 1398
MslI	CAYNNNNRTG	2 cut(s)	162, 1568
Msp20I	TGGCCA	1 cut(s)	43
MspA1I	CMGCKG	1 cut(s)	269
MspI	CCGG	8 cut(s)	408, 428, 468, 498, 620, 1022, 1586, 1647
MspR9I	CCNGG	5 cut(s)	143, 424, 498, 604, 961
MunI	CAATTG	1 cut(s)	37
Mva1269I	GAATGC	2 cut(s)	532, 547
MvaI	CCWGG	4 cut(s)	143, 424, 604, 961
MvnI	CGCG	1 cut(s)	1730
NaeI	GCCGGC	3 cut(s)	409, 429, 469
NciI	CCSGG	1 cut(s)	498
NcoI	CCATGG	1 cut(s)	675
NdeII	GATC	9 cut(s)	228, 245, 489, 527, 606, 679, 886, 987, 1357
NgoMIV	GCCGGC	3 cut(s)	407, 427, 467
NlaIV	GGNNCC	6 cut(s)	932, 1016, 1026, 1122, 1170, 1666
NmuCI	GTSAC	4 cut(s)	186, 196, 631, 1709
NspI	RCATGY	1 cut(s)	1567
NspV	TTCGAA	2 cut(s)	509, 1445
PagI	TCATGA	1 cut(s)	646
PciSI	GCTCTTC	1 cut(s)	848
PcsI	WCGNNNNNNNCGW	1 cut(s)	408
PctI	GAATGC	2 cut(s)	532, 547
PdiI	GCCGGC	3 cut(s)	409, 429, 469
PflFI	GACNNNGTC	1 cut(s)	208
PflMI	CCANNNNNTGG	1 cut(s)	927
Ple19I	CGATCG	2 cut(s)	492, 530
PleI	GAGTC	2 cut(s)	193, 1706
PpsI	GAGTC	2 cut(s)	193, 1706
PpuMI	RGGWCCY	1 cut(s)	1168
PsiI	TTATAA	1 cut(s)	1377
Psp124BI	GAGCTC	5 cut(s)	339, 348, 372, 843, 1067
Psp5II	RGGWCCY	1 cut(s)	1168
Psp6I	CCWGG	4 cut(s)	141, 422, 602, 959
PspFI	CCCAGC	5 cut(s)	432, 1033, 1045, 1051, 1210
PspGI	CCWGG	4 cut(s)	141, 422, 602, 959
PspN4I	GGNNCC	6 cut(s)	932, 1016, 1026, 1122, 1170, 1666
PspPI	GGNCC	5 cut(s)	430, 480, 1014, 1121, 1168
PspPPI	RGGWCCY	1 cut(s)	1168
PstNI	CAGNNNCTG	2 cut(s)	853, 1691
PsuI	RGATCY	2 cut(s)	606, 679
PsyI	GACNNNGTC	1 cut(s)	208
PvuI	CGATCG	2 cut(s)	492, 530
RgaI	GCGATCGC	1 cut(s)	530
RigI	GGCCGGCC	1 cut(s)	431
RseI	CAYNNNNRTG	2 cut(s)	162, 1568
SacI	GAGCTC	5 cut(s)	339, 348, 372, 843, 1067
SapI	GCTCTTC	1 cut(s)	848
SaqAI	TTAA	4 cut(s)	521, 1142, 1289, 1398
Sau3AI	GATC	9 cut(s)	228, 245, 489, 527, 606, 679, 886, 987, 1357
Sau96I	GGNCC	5 cut(s)	430, 480, 1014, 1121, 1168
SchI	GAGTC	2 cut(s)	194, 1706
ScrFI	CCNGG	5 cut(s)	143, 424, 498, 604, 961
SduI	GDGCHC	7 cut(s)	339, 348, 372, 390, 689, 843, 1067
SfaAI	GCGATCGC	1 cut(s)	530
SfaNI	GCATC	1 cut(s)	952
SfuI	TTCGAA	2 cut(s)	509, 1445
SgfI	GCGATCGC	1 cut(s)	530
SinI	GGWCC	1 cut(s)	1168
SmiMI	CAYNNNNRTG	2 cut(s)	162, 1568
SmlI	CTYRAG	2 cut(s)	347, 389
SmoI	CTYRAG	2 cut(s)	347, 389
SspMI	CTAG	1 cut(s)	1738
SstI	GAGCTC	5 cut(s)	339, 348, 372, 843, 1067
StyD4I	CCNGG	5 cut(s)	141, 422, 496, 602, 959
StyI	CCWWGG	1 cut(s)	675
TaaI	ACNGT	2 cut(s)	113, 691
TaiI	ACGT	1 cut(s)	303
TauI	GCSGC	7 cut(s)	63, 66, 170, 269, 481, 1126, 1129
Tru1I	TTAA	4 cut(s)	521, 1142, 1289, 1398
Tru9I	TTAA	4 cut(s)	521, 1142, 1289, 1398
TscAI	CASTG	6 cut(s)	694, 1065, 1101, 1416, 1483, 1666
TseFI	GTSAC	4 cut(s)	186, 196, 631, 1709
TseI	GCWGC	7 cut(s)	49, 269, 740, 1147, 1499, 1575, 1641
Tsp45I	GTSAC	4 cut(s)	186, 196, 631, 1709
TspDTI	ATGAA	7 cut(s)	70, 569, 602, 635, 653, 998, 1554
TspRI	CASTG	6 cut(s)	694, 1065, 1101, 1416, 1483, 1666
Tth111I	GACNNNGTC	1 cut(s)	208
Van91I	CCANNNNNTGG	1 cut(s)	927
VpaK11BI	GGWCC	1 cut(s)	1168
XapI	RAATTY	3 cut(s)	137, 511, 734
XceI	RCATGY	1 cut(s)	1567
XmiI	GTMKAC	1 cut(s)	801
XspI	CTAG	1 cut(s)	1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.