Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0008456

Physical Location & Seq

Genomic Coordinates Forward (+)

28653915 .. 28655893

Gene Structure 1979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG173600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGGCGTCCGCCGTCTTAGCGAATCGGAACGAACCCAATTGGCCACAGCAGCCCAGAGGCGGCGGCGGAGGCGGAGGATTCATGGGAAAAGTCCCTTTCTCAAACCCTAACCGTAACAACCCTAACCCTAAGACCAAATTCCAAGCTCCTCATCATCATCATCATCATGCCGCCGATTTCAATGACGAGTCACCCGCCGTGACCCAGACGGCGTCCGACGACGCTTCGTCGATCAACCACCATCGGCGATCAAACACAACGAACACCGCCGCTGCCGATTTCAACCTCGTTCAGTCCCAATACGTCAGCTTCAACATCGCGACCTATTCAAGAAAAGAGCTGGTCGAGCTCAAGAATCGCCTTCTCTCTGAGCTCGACCAGATTCGCGTGCTCAAGAATCGAATCGAAGCCGGCGACTTCAATCCCAGGCCGGCCCAGCCCAAAAAGCCCAACACCACCAAGAAGATTGCCGGCTCGAAGCGGCCCTTGCCGATCGCCCCCGGCAAGGATTCGAATTCCAATTTGAAGCGATCGCATTCGGAGAATGTCAATTTGATGAAGAATTGCGGGCAGATTTTGTCCAAGCTGATGAAGCACAAGCACGCCTGGATCTTCAAAAAGCCGGTTGATGTGGTGACACTGAAGCTTCATGATTACTATGATATAATCAAGCACCCCATGGATCTGGGCACTGTCAAAATGAATCTATCCAAGAATTTGTATTCGACGCCATTGGAATTCGCTGCTGATGTGCGATTGACCTTTGAAAATGCCATGCGGTATAATCCCCGAGGCCATGATGTCTACAACTACGCCAATCAGCTTCGTTCTTTGTTTGAGGAGCTTTTCCAGCCCCTGATTGACAAATTGGGGGATGGGTTTGGTGGGGATCGAGGAGCTTCCGATGAGGAGGAATTGCAGGCCAGTTCTTGGAACCATGTTGAGCCTGAGAGGCATCCTCCTCCTCCGCCCAGGAGGGAAGACCCAATGCCCATGAAGATCGATAAGAAGACTGAGGTGGTTCGGCCCCCTCCGGCTCCAACCCCAGCTCCAGTCCCAGCCCCAGTGAGCTCATCAAATCCACCTTTAGCTAATTCTCCAGTGAGGACGAGTTCGCAAGTGAAGGGGCCGCCGCAAGTGAAGCCCTTGAAGCAGCCGAAGCCAAAAGCAAAGGACCCAAACAAGAGGGATATGAGCATGGAGGAGAAGCATAAGCTGGGACTTGGGTTGCAGAGCTTGCCTCAGGAGAAAATGGAGCAAGTTGTGCAGATTATTAGAAAGAGGAATGGGCATTTAAAGCAGGATGGGGATGAGATTGAGCTTGACATTGAGGCTGTAGATACAGAAACCCTTTGGGAGCTTGATCGGCTTGTTACAAATTATAAAAAGATGGTTAGCAAGATTAAGCGTCAAGCACTGATGGGCAACAACAGCAATAGCAACATTGCTTCGAACAGAGGAGGTCAAGAGGAATTGCCTGCTAGTGAGAAAATTGATGTCTCAGCAGCAGAGCCGAAGAGGCCAAAGAAAGGGGAAGTGGGAGATGAAGATGTGGATATTGGTGATGACATGCCAATGAGCAGCTTTCCTCCGGTTGAGATTGAGAAAGATGTTGGGGGCAATGCCAGTAGTGATAATAGTTCAAGCAGCTCCGGCAGTTCAAGCAGTGGCTCCTCCTCATCAAGCGATTCAGATTCTGGCAGTTCTTCAGGAAGTGACTCGGATGATGATAACGCGCAGTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0007275 GO:0007346 GO:0008150 GO:0009292 GO:0009294 GO:0009987 GO:0022622 GO:0032501 GO:0032502 GO:0044764 GO:0045787 GO:0045931 GO:0048364 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051704 GO:0051726 GO:0065007 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

581

Amino Acids

63.93

Weight (kDa)

7.81

Isoelectric Point (pI)

59.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	189 - 273	9.4e-22	Bromodomain
BET	PF17035	398 - 459	1.2e-21	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10550 AT5G65630
fragaria_vesca	FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150
malus_domestica	MD05G1049900.v1.1 MD10G1057000.v1.1
prunus_persica	Prupe.8G075200_v2.0.a1
pyrus_communis	pycom05g04180 pycom10g04390
rosa_chinensis	RchiOBHm_Chr6g0269471
rosa_laevigata	RLG00000013850
rosa_roxburghii	Rroxscaffold_7G00198710
rosa_rugosa	Rorug06G0048300 Rorug06G0048400
rosa_samantha	Rh6AG168300 Rh6BG173600 Rh6CG167900 Rh6DG159900
rosa_wichuraiana	Rw6G014490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1383
AccB7I	CCANNNNNTGG	1 cut(s)	930
AccI	GTMKAC	1 cut(s)	804
AccII	CGCG	3 cut(s)	320, 387, 1736
AclWI	GGATC	3 cut(s)	617, 690, 897
AcoI	YGGCCR	1 cut(s)	41
AcsI	RAATTY	4 cut(s)	137, 514, 715, 737
AcuI	CTGAAG	2 cut(s)	662, 1692
AcyI	GRCGYC	3 cut(s)	5, 212, 728
AfiI	CCNNNNNNNGG	4 cut(s)	59, 505, 930, 1529
AhdI	GACNNNNNGTC	1 cut(s)	226
AjnI	CCWGG	3 cut(s)	425, 605, 971
Alw21I	GWGCWC	4 cut(s)	351, 375, 393, 1073
Alw26I	GTCTC	1 cut(s)	1504
AlwI	GGATC	3 cut(s)	617, 690, 897
AlwNI	CAGNNNCTG	2 cut(s)	856, 1697
Ama87I	CYCGRG	1 cut(s)	789
AoxI	GGCC	9 cut(s)	41, 428, 432, 482, 793, 921, 1025, 1127, 1520
ApeKI	GCWGC	7 cut(s)	49, 272, 743, 1153, 1505, 1581, 1647
ApoI	RAATTY	4 cut(s)	137, 514, 715, 737
AsiSI	GCGATCGC	1 cut(s)	533
AspLEI	GCGC	1 cut(s)	1738
AspS9I	GGNCC	5 cut(s)	433, 483, 1026, 1127, 1174
AsuC2I	CCSGG	1 cut(s)	501
AsuHPI	GGTGA	3 cut(s)	183, 646, 1574
AsuII	TTCGAA	2 cut(s)	512, 1451
AvaI	CYCGRG	1 cut(s)	789
AvaII	GGWCC	1 cut(s)	1174
AxyI	CCTNAGG	1 cut(s)	1242
BaeGI	GKGCMC	1 cut(s)	692
BalI	TGGCCA	1 cut(s)	43
BanII	GRGCYC	3 cut(s)	351, 375, 1073
BbsI	GAAGAC	2 cut(s)	987, 1016
Bbv12I	GWGCWC	4 cut(s)	351, 375, 393, 1073
BbvI	GCAGC	7 cut(s)	61, 259, 730, 1165, 1517, 1593, 1659
BccI	CCATC	5 cut(s)	249, 869, 1298, 1384, 1414
BceAI	ACGGC	2 cut(s)	182, 225
BciT130I	CCWGG	3 cut(s)	427, 607, 973
BcnI	CCSGG	1 cut(s)	501
BcoDI	GTCTC	1 cut(s)	1504
BfaI	CTAG	2 cut(s)	1482, 1744
BfmI	CTRYAG	1 cut(s)	1335
BglI	GCCNNNNNGGC	2 cut(s)	952, 1519
Bme1390I	CCNGG	4 cut(s)	427, 501, 607, 973
Bme18I	GGWCC	1 cut(s)	1174
BmeRI	GACNNNNNGTC	1 cut(s)	226
BmeT110I	CYCGRG	1 cut(s)	789
BmgT120I	GGNCC	5 cut(s)	433, 483, 1026, 1127, 1174
BmiI	GGNNCC	6 cut(s)	935, 1028, 1038, 1128, 1176, 1672
BmrFI	CCNGG	4 cut(s)	427, 501, 607, 973
BmrI	ACTGGG	1 cut(s)	1058
BmsI	GCATC	1 cut(s)	964
BmuI	ACTGGG	1 cut(s)	1058
BpiI	GAAGAC	2 cut(s)	987, 1016
BplI	GAGNNNNNCTC	4 cut(s)	943, 975, 1225, 1257
BpmI	CTGGAG	2 cut(s)	1035, 1083
Bpu14I	TTCGAA	2 cut(s)	512, 1451
BpuEI	CTTGAG	2 cut(s)	335, 377
BpuMI	CCSGG	1 cut(s)	501
Bsa29I	ATCGAT	1 cut(s)	1002
BsaHI	GRCGYC	3 cut(s)	5, 212, 728
BsaJI	CCNNGG	5 cut(s)	425, 499, 678, 790, 971
BsaWI	WCCGGW	1 cut(s)	1591
BsaXI	ACNNNNNCTCC	2 cut(s)	1033, 1063
Bsc4I	CCNNNNNNNGG	4 cut(s)	59, 505, 930, 1529
Bse118I	RCCGGY	4 cut(s)	410, 430, 470, 622
Bse1I	ACTGG	5 cut(s)	924, 1052, 1064, 1100, 1626
Bse21I	CCTNAGG	1 cut(s)	1242
Bse3DI	GCAATG	2 cut(s)	1443, 1627
BseBI	CCWGG	3 cut(s)	427, 607, 973
BseCI	ATCGAT	1 cut(s)	1002
BseDI	CCNNGG	5 cut(s)	425, 499, 678, 790, 971
BseGI	GGATG	5 cut(s)	880, 955, 1309, 1315, 1729
BseLI	CCNNNNNNNGG	4 cut(s)	59, 505, 930, 1529
BseMI	GCAATG	2 cut(s)	1443, 1627
BseMII	CTCAG	5 cut(s)	360, 939, 1005, 1256, 1515
BseNI	ACTGG	5 cut(s)	924, 1052, 1064, 1100, 1626
BseSI	GKGCMC	1 cut(s)	692
BseXI	GCAGC	7 cut(s)	61, 259, 730, 1165, 1517, 1593, 1659
BseYI	CCCAGC	4 cut(s)	435, 1045, 1057, 1216
BsgI	GTGCAG	1 cut(s)	1286
Bsh1236I	CGCG	3 cut(s)	320, 387, 1736
Bsh1285I	CGRYCG	2 cut(s)	495, 533
BshFI	GGCC	9 cut(s)	43, 430, 434, 484, 795, 923, 1027, 1129, 1522
BshVI	ATCGAT	1 cut(s)	1002
BsiEI	CGRYCG	2 cut(s)	495, 533
BsiHKAI	GWGCWC	4 cut(s)	351, 375, 393, 1073
BsiHKCI	CYCGRG	1 cut(s)	789
BsiSI	CCGG	8 cut(s)	411, 431, 471, 501, 623, 1034, 1592, 1653
BslFI	GGGAC	4 cut(s)	77, 280, 1040, 1233
BslI	CCNNNNNNNGG	4 cut(s)	59, 505, 930, 1529
BsmAI	GTCTC	1 cut(s)	1504
BsmFI	GGGAC	4 cut(s)	77, 280, 1040, 1233
BsmI	GAATGC	1 cut(s)	535
BsnI	GGCC	9 cut(s)	43, 430, 434, 484, 795, 923, 1027, 1129, 1522
BsoBI	CYCGRG	1 cut(s)	789
Bsp119I	TTCGAA	2 cut(s)	512, 1451
Bsp1286I	GDGCHC	5 cut(s)	351, 375, 393, 692, 1073
Bsp143I	GATC	9 cut(s)	231, 248, 492, 530, 609, 682, 889, 999, 1363
Bsp19I	CCATGG	1 cut(s)	678
Bsp68I	TCGCGA	1 cut(s)	320
BspANI	GGCC	9 cut(s)	43, 430, 434, 484, 795, 923, 1027, 1129, 1522
BspCNI	CTCAG	5 cut(s)	361, 940, 1006, 1255, 1514
BspDI	ATCGAT	1 cut(s)	1002
BspFNI	CGCG	3 cut(s)	320, 387, 1736
BspHI	TCATGA	1 cut(s)	649
BspLI	GGNNCC	6 cut(s)	935, 1028, 1038, 1128, 1176, 1672
BspPI	GGATC	3 cut(s)	617, 690, 897
BspT104I	TTCGAA	2 cut(s)	512, 1451
BsrDI	GCAATG	2 cut(s)	1443, 1627
BsrFI	RCCGGY	4 cut(s)	410, 430, 470, 622
BsrI	ACTGG	5 cut(s)	924, 1052, 1064, 1100, 1626
BssAI	RCCGGY	4 cut(s)	410, 430, 470, 622
BssECI	CCNNGG	5 cut(s)	425, 499, 678, 790, 971
BssMI	GATC	9 cut(s)	231, 248, 492, 530, 609, 682, 889, 999, 1363
BssNI	GRCGYC	3 cut(s)	5, 212, 728
BssT1I	CCWWGG	1 cut(s)	678
Bst2UI	CCWGG	3 cut(s)	427, 607, 973
Bst4CI	ACNGT	2 cut(s)	113, 694
Bst6I	CTCTTC	1 cut(s)	1511
BstACI	GRCGYC	3 cut(s)	5, 212, 728
BstAPI	GCANNNNNTGC	2 cut(s)	1237, 1264
BstBI	TTCGAA	2 cut(s)	512, 1451
BstC8I	GCNNGC	9 cut(s)	389, 412, 432, 472, 569, 603, 921, 1238, 1479
BstDEI	CTNAG	7 cut(s)	16, 129, 369, 948, 1014, 1242, 1501
BstDSI	CCRYGG	1 cut(s)	678
BstF5I	GGATG	5 cut(s)	880, 955, 1309, 1315, 1729
BstFNI	CGCG	3 cut(s)	320, 387, 1736
BstHHI	GCGC	1 cut(s)	1738
BstKTI	GATC	9 cut(s)	234, 251, 495, 533, 612, 685, 892, 1002, 1366
BstMAI	GTCTC	1 cut(s)	1504
BstMBI	GATC	9 cut(s)	231, 248, 492, 530, 609, 682, 889, 999, 1363
BstMCI	CGRYCG	2 cut(s)	495, 533
BstNI	CCWGG	3 cut(s)	427, 607, 973
BstNSI	RCATGY	1 cut(s)	1573
BstSCI	CCNGG	4 cut(s)	425, 499, 605, 971
BstSFI	CTRYAG	1 cut(s)	1335
BstSLI	GKGCMC	1 cut(s)	692
BstUI	CGCG	3 cut(s)	320, 387, 1736
BstV1I	GCAGC	7 cut(s)	61, 259, 730, 1165, 1517, 1593, 1659
BstV2I	GAAGAC	2 cut(s)	987, 1016
BstX2I	RGATCY	2 cut(s)	609, 682
BstXI	CCANNNNNNTGG	1 cut(s)	685
BstYI	RGATCY	2 cut(s)	609, 682
Bsu15I	ATCGAT	1 cut(s)	1002
Bsu36I	CCTNAGG	1 cut(s)	1242
BsuRI	GGCC	9 cut(s)	43, 430, 434, 484, 795, 923, 1027, 1129, 1522
BsuTUI	ATCGAT	1 cut(s)	1002
BtgI	CCRYGG	1 cut(s)	678
BtgZI	GCGATG	1 cut(s)	301
BtsCI	GGATG	5 cut(s)	880, 955, 1309, 1315, 1729
BtsI	GCAGTG	1 cut(s)	1672
BtsIMutI	CAGTG	6 cut(s)	638, 690, 1071, 1107, 1415, 1672
BtuMI	TCGCGA	1 cut(s)	320
Cac8I	GCNNGC	9 cut(s)	389, 412, 432, 472, 569, 603, 921, 1238, 1479
CaiI	CAGNNNCTG	2 cut(s)	856, 1697
CciI	TCATGA	1 cut(s)	649
CfoI	GCGC	1 cut(s)	1738
Cfr10I	RCCGGY	4 cut(s)	410, 430, 470, 622
Cfr13I	GGNCC	5 cut(s)	433, 483, 1026, 1127, 1174
ClaI	ATCGAT	1 cut(s)	1002
CseI	GACGC	4 cut(s)	201, 230, 736, 1397
DdeI	CTNAG	7 cut(s)	16, 129, 369, 948, 1014, 1242, 1501
DpnI	GATC	9 cut(s)	233, 250, 494, 532, 611, 684, 891, 1001, 1365
DpnII	GATC	9 cut(s)	231, 248, 492, 530, 609, 682, 889, 999, 1363
DraI	TTTAAA	1 cut(s)	1296
DriI	GACNNNNNGTC	1 cut(s)	226
EaeI	YGGCCR	1 cut(s)	41
Eam1104I	CTCTTC	1 cut(s)	1511
Eam1105I	GACNNNNNGTC	1 cut(s)	226
EarI	CTCTTC	1 cut(s)	1511
EciI	GGCGGA	3 cut(s)	81, 87, 957
Ecl136II	GAGCTC	3 cut(s)	349, 373, 1071
Eco130I	CCWWGG	1 cut(s)	678
Eco24I	GRGCYC	3 cut(s)	351, 375, 1073
Eco47I	GGWCC	1 cut(s)	1174
Eco53kI	GAGCTC	3 cut(s)	349, 373, 1071
Eco57I	CTGAAG	2 cut(s)	662, 1692
Eco81I	CCTNAGG	1 cut(s)	1242
Eco88I	CYCGRG	1 cut(s)	789
EcoICRI	GAGCTC	3 cut(s)	349, 373, 1071
EcoO109I	RGGNCCY	1 cut(s)	1174
EcoRI	GAATTC	2 cut(s)	514, 737
EcoRII	CCWGG	3 cut(s)	425, 605, 971
EcoT14I	CCWWGG	1 cut(s)	678
EcoT38I	GRGCYC	3 cut(s)	351, 375, 1073
ErhI	CCWWGG	1 cut(s)	678
FalI	AAGNNNNNCTT	2 cut(s)	470, 502
FaqI	GGGAC	4 cut(s)	77, 280, 1040, 1233
FauI	CCCGC	2 cut(s)	202, 560
FblI	GTMKAC	1 cut(s)	804
FokI	GGATG	5 cut(s)	887, 942, 1316, 1322, 1736
FriOI	GRGCYC	3 cut(s)	351, 375, 1073
FseI	GGCCGGCC	1 cut(s)	434
FspBI	CTAG	2 cut(s)	1482, 1744
GlaI	GCGC	1 cut(s)	1737
GsaI	CCCAGC	4 cut(s)	439, 1049, 1061, 1220
GsuI	CTGGAG	2 cut(s)	1035, 1083
HaeIII	GGCC	9 cut(s)	43, 430, 434, 484, 795, 923, 1027, 1129, 1522
HapII	CCGG	8 cut(s)	411, 431, 471, 501, 623, 1034, 1592, 1653
HgaI	GACGC	4 cut(s)	201, 230, 736, 1397
HhaI	GCGC	1 cut(s)	1738
Hin1I	GRCGYC	3 cut(s)	5, 212, 728
Hin6I	GCGC	1 cut(s)	1736
HinP1I	GCGC	1 cut(s)	1736
HindIII	AAGCTT	1 cut(s)	644
HpaII	CCGG	8 cut(s)	411, 431, 471, 501, 623, 1034, 1592, 1653
HphI	GGTGA	3 cut(s)	183, 646, 1574
Hpy166II	GTNNAC	1 cut(s)	805
Hpy188I	TCNGA	7 cut(s)	27, 217, 370, 541, 904, 1693, 1723
Hpy188III	TCNNGA	8 cut(s)	319, 330, 352, 394, 650, 1244, 1466, 1710
Hpy8I	GTNNAC	1 cut(s)	805
Hpy99I	CGWCG	4 cut(s)	221, 224, 232, 730
HpyAV	CCTTC	2 cut(s)	371, 1117
HpyCH4III	ACNGT	2 cut(s)	113, 694
HpyCH4IV	ACGT	1 cut(s)	303
HpyCH4V	TGCA	3 cut(s)	919, 1231, 1267
HpyF3I	CTNAG	7 cut(s)	16, 129, 369, 948, 1014, 1242, 1501
HpySE526I	ACGT	1 cut(s)	303
Hsp92I	GRCGYC	3 cut(s)	5, 212, 728
HspAI	GCGC	1 cut(s)	1736
KroI	GCCGGC	3 cut(s)	410, 430, 470
KroNI	GCCGGC	3 cut(s)	412, 432, 472
Kzo9I	GATC	9 cut(s)	231, 248, 492, 530, 609, 682, 889, 999, 1363
LmnI	GCTCC	9 cut(s)	151, 841, 896, 1042, 1054, 1255, 1357, 1655, 1676
Lsp1109I	GCAGC	7 cut(s)	61, 259, 730, 1165, 1517, 1593, 1659
LweI	GCATC	1 cut(s)	964
MaeI	CTAG	2 cut(s)	1482, 1744
MaeII	ACGT	1 cut(s)	303
MaeIII	GTNAC	6 cut(s)	113, 189, 199, 634, 1372, 1715
MalI	GATC	9 cut(s)	233, 250, 494, 532, 611, 684, 891, 1001, 1365
MboI	GATC	9 cut(s)	231, 248, 492, 530, 609, 682, 889, 999, 1363
MboII	GAAGA	9 cut(s)	475, 571, 604, 992, 1009, 1021, 1528, 1559, 1698
MfeI	CAATTG	1 cut(s)	37
MflI	RGATCY	2 cut(s)	609, 682
MhlI	GDGCHC	5 cut(s)	351, 375, 393, 692, 1073
MlsI	TGGCCA	1 cut(s)	43
MluNI	TGGCCA	1 cut(s)	43
MlyI	GAGTC	2 cut(s)	197, 1712
MmeI	TCCRAC	2 cut(s)	240, 1064
Mox20I	TGGCCA	1 cut(s)	43
MroNI	GCCGGC	3 cut(s)	410, 430, 470
MscI	TGGCCA	1 cut(s)	43
MseI	TTAA	2 cut(s)	1295, 1404
MslI	CAYNNNNRTG	2 cut(s)	165, 1574
Msp20I	TGGCCA	1 cut(s)	43
MspA1I	CMGCKG	1 cut(s)	272
MspI	CCGG	8 cut(s)	411, 431, 471, 501, 623, 1034, 1592, 1653
MspR9I	CCNGG	4 cut(s)	427, 501, 607, 973
MunI	CAATTG	1 cut(s)	37
Mva1269I	GAATGC	1 cut(s)	535
MvaI	CCWGG	3 cut(s)	427, 607, 973
MvnI	CGCG	3 cut(s)	320, 387, 1736
NaeI	GCCGGC	3 cut(s)	412, 432, 472
NciI	CCSGG	1 cut(s)	501
NcoI	CCATGG	1 cut(s)	678
NdeII	GATC	9 cut(s)	231, 248, 492, 530, 609, 682, 889, 999, 1363
NgoMIV	GCCGGC	3 cut(s)	410, 430, 470
NlaIV	GGNNCC	6 cut(s)	935, 1028, 1038, 1128, 1176, 1672
NmuCI	GTSAC	4 cut(s)	189, 199, 634, 1715
NruI	TCGCGA	1 cut(s)	320
NspI	RCATGY	1 cut(s)	1573
NspV	TTCGAA	2 cut(s)	512, 1451
PagI	TCATGA	1 cut(s)	649
PcsI	WCGNNNNNNNCGW	1 cut(s)	411
PctI	GAATGC	1 cut(s)	535
PdiI	GCCGGC	3 cut(s)	412, 432, 472
PflFI	GACNNNGTC	1 cut(s)	211
PflMI	CCANNNNNTGG	1 cut(s)	930
Ple19I	CGATCG	2 cut(s)	495, 533
PleI	GAGTC	2 cut(s)	196, 1712
PpsI	GAGTC	2 cut(s)	196, 1712
PpuMI	RGGWCCY	1 cut(s)	1174
PsiI	TTATAA	1 cut(s)	1383
Psp124BI	GAGCTC	3 cut(s)	351, 375, 1073
Psp5II	RGGWCCY	1 cut(s)	1174
Psp6I	CCWGG	3 cut(s)	425, 605, 971
PspFI	CCCAGC	4 cut(s)	435, 1045, 1057, 1216
PspGI	CCWGG	3 cut(s)	425, 605, 971
PspN4I	GGNNCC	6 cut(s)	935, 1028, 1038, 1128, 1176, 1672
PspPI	GGNCC	5 cut(s)	433, 483, 1026, 1127, 1174
PspPPI	RGGWCCY	1 cut(s)	1174
PstNI	CAGNNNCTG	2 cut(s)	856, 1697
PsuI	RGATCY	2 cut(s)	609, 682
PsyI	GACNNNGTC	1 cut(s)	211
PvuI	CGATCG	2 cut(s)	495, 533
RgaI	GCGATCGC	1 cut(s)	533
RigI	GGCCGGCC	1 cut(s)	434
RruI	TCGCGA	1 cut(s)	320
RseI	CAYNNNNRTG	2 cut(s)	165, 1574
SacI	GAGCTC	3 cut(s)	351, 375, 1073
SaqAI	TTAA	2 cut(s)	1295, 1404
Sau3AI	GATC	9 cut(s)	231, 248, 492, 530, 609, 682, 889, 999, 1363
Sau96I	GGNCC	5 cut(s)	433, 483, 1026, 1127, 1174
SchI	GAGTC	2 cut(s)	197, 1712
ScrFI	CCNGG	4 cut(s)	427, 501, 607, 973
SduI	GDGCHC	5 cut(s)	351, 375, 393, 692, 1073
SfaAI	GCGATCGC	1 cut(s)	533
SfaNI	GCATC	1 cut(s)	964
SfcI	CTRYAG	1 cut(s)	1335
SfuI	TTCGAA	2 cut(s)	512, 1451
SgfI	GCGATCGC	1 cut(s)	533
SinI	GGWCC	1 cut(s)	1174
SmiMI	CAYNNNNRTG	2 cut(s)	165, 1574
SmlI	CTYRAG	2 cut(s)	350, 392
SmoI	CTYRAG	2 cut(s)	350, 392
SspMI	CTAG	2 cut(s)	1482, 1744
SstI	GAGCTC	3 cut(s)	351, 375, 1073
StyD4I	CCNGG	4 cut(s)	425, 499, 605, 971
StyI	CCWWGG	1 cut(s)	678
TaaI	ACNGT	2 cut(s)	113, 694
TaiI	ACGT	1 cut(s)	306
TauI	GCSGC	7 cut(s)	63, 66, 173, 272, 484, 1132, 1135
Tru1I	TTAA	2 cut(s)	1295, 1404
Tru9I	TTAA	2 cut(s)	1295, 1404
TscAI	CASTG	6 cut(s)	645, 697, 1071, 1107, 1422, 1672
TseFI	GTSAC	4 cut(s)	189, 199, 634, 1715
TseI	GCWGC	7 cut(s)	49, 272, 743, 1153, 1505, 1581, 1647
Tsp45I	GTSAC	4 cut(s)	189, 199, 634, 1715
TspDTI	ATGAA	7 cut(s)	70, 572, 605, 638, 716, 1010, 1560
TspRI	CASTG	6 cut(s)	645, 697, 1071, 1107, 1422, 1672
Tth111I	GACNNNGTC	1 cut(s)	211
Van91I	CCANNNNNTGG	1 cut(s)	930
VpaK11BI	GGWCC	1 cut(s)	1174
XapI	RAATTY	4 cut(s)	137, 514, 715, 737
XceI	RCATGY	1 cut(s)	1573
XmiI	GTMKAC	1 cut(s)	804
XspI	CTAG	2 cut(s)	1482, 1744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.