Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0008456

Physical Location & Seq

Genomic Coordinates Reverse (-)

44376911 .. 44379284

Gene Structure 2374 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00198710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGGCGCCACGTGCACTCACTTTTGCATCGGAGCCGTCCGTGCCAGATAATACGGTCAGCTTCAAGGGCAGGAAGGAAACTGGAGGGAGCCGTCAGATGAAGAACGGACGGCTGAGAAGCCGGCGACTTCAATCCCAAGCCGGCCCAGCCCAAAAGCCCAACACCACCAAGAAGATTGCCGGCTCGAAGCGGCCCTTGCCGATCGCCCCCGGCAAGGATTCGAACTCCAATTTGAAGCGATCGCATTCGGAGAATGTCAATTTGATGAAGAATTGTGGGCAGATTTTGTCAAAGCTGATGAAGCACAAGCACGCCTGGATCTTCAAAAAGCCTGTTGATGTGGTGACAATGAAGCTTCATGATTACTATGATATAATCAAGCACCCCATGGATCTGGGCACTGTCAAAACGAATCTATCCAAGAATTTGTATTCGACACCATTGGAATTTGCTGCTGATGTGCGATTGACCTTTGAAAATGCCATGCGGTATAATCCCCGAGGCCATGATGTCTACAACTACGCCAATCAGCTTCGCTCTTTGTTTGAGGAGCTCTTCCAGCCCCTGATTGACAAATTGGGGGACGGGTTTGGTGGGGATCGAGGAGTTTCCGATGAGGAGGAATTGCAGGCCAGTTCTTGGAACCATGTTGAGCCTGAGAGGCATCCTCCTCCGCCCAGGAGGGAAGACCCAATGCCCATGAAGATCGACAAGAAGACTGAGGTGGTTCGGCCCCCTCCGGCTCCAACCCCAGCTCCAGTCCCAGCCCCAGTGAGCTCATCTAATCCACCATTAGCTAATTCTCCAGTGAGGACAAGTTCGCAAGTGAAGGGGCCGCCGCAAGTGAAGCCCTTGAAGCAGCCGAAGCCAAAAGCAAAGGACCCAAACAAGAGGGATATGAGCATGGAGGAGAAGCATAAGCTGGGACTTGGGTTGCAGAGCTTGCCTCAGGAGAAAATGGAGCAAGTTGTGCAGATTATTAGAAAGAGGAATGGGCATTTAAAGCAGGATGGGGATGAGATTGAGCTTGACATTGAGGCTGTCGATACAGAAACCCTCTGGGAGCTCGATCGGCTTGTTACAAATTATAAAAAGATGGTTAGCAAGATTAAGCGTCAAGCGCTGATGGGCAACAACAGCAATAGCAACATTGCTTCAAACAGAGGAGGTCAAGAGGAATTGCCTGCTAGTGAGAAAATTGATGTCTCAGCAGCAGAGCCTAAGAGGCCAAAGAAAGGGGAAGTGGGAGATGAAGATGTGGATATTGGTGATGACATGCCAATGAGCAGCTTTCCTCCGGTTGAGATTGAGAAAGATGTTGGGGGCAATGCCAGTAGTGATAATAGTTCAAGCAGCTCCGGCAGTTCAAGCAGTGGCTCCTCCTCATCAAGCGATTCAGATTCTGGCAGTTCTTCAGGGAGTGACTCGGATGATGATAACGCGCAGTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0007275 GO:0007346 GO:0008150 GO:0009292 GO:0009294 GO:0009987 GO:0022622 GO:0032501 GO:0032502 GO:0044764 GO:0045787 GO:0045931 GO:0048364 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051704 GO:0051726 GO:0065007 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BET Bromodomain

Protein Analysis

483

Amino Acids

53.03

Weight (kDa)

8.74

Isoelectric Point (pI)

65.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	92 - 176	2.7e-22	Bromodomain
BET	PF17035	300 - 361	9.1e-22	Bromodomain extra-terminal - transcription regulation

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10550 AT5G65630
fragaria_vesca	FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150 FvH4_2g11150
malus_domestica	MD05G1049900.v1.1 MD10G1057000.v1.1
prunus_persica	Prupe.8G075200_v2.0.a1
pyrus_communis	pycom05g04180 pycom10g04390
rosa_chinensis	RchiOBHm_Chr6g0269471
rosa_laevigata	RLG00000013850
rosa_roxburghii	Rroxscaffold_7G00198710
rosa_rugosa	Rorug06G0048300 Rorug06G0048400
rosa_samantha	Rh6AG168300 Rh6BG173600 Rh6CG167900 Rh6DG159900
rosa_wichuraiana	Rw6G014490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1089
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	1 cut(s)	639
AccI	GTMKAC	1 cut(s)	513
AccII	CGCG	1 cut(s)	1442
AciI	CCGC	5 cut(s)	190, 487, 674, 836, 839
AclWI	GGATC	3 cut(s)	326, 399, 606
AcsI	RAATTY	2 cut(s)	424, 446
AcuI	CTGAAG	1 cut(s)	1398
AcvI	CACGTG	1 cut(s)	11
AcyI	GRCGYC	1 cut(s)	5
AfeI	AGCGCT	1 cut(s)	1122
AfiI	CCNNNNNNNGG	3 cut(s)	214, 639, 1235
AgsI	TTSAA	9 cut(s)	64, 131, 235, 325, 476, 856, 1158, 1350, 1368
AjnI	CCWGG	2 cut(s)	314, 677
Alw21I	GWGCWC	4 cut(s)	16, 555, 779, 1068
Alw26I	GTCTC	1 cut(s)	1210
Alw44I	GTGCAC	1 cut(s)	12
AlwI	GGATC	3 cut(s)	326, 399, 606
AlwNI	CAGNNNCTG	2 cut(s)	565, 1403
Ama87I	CYCGRG	1 cut(s)	498
Aor51HI	AGCGCT	1 cut(s)	1122
AoxI	GGCC	7 cut(s)	142, 191, 502, 630, 731, 833, 1226
ApaLI	GTGCAC	1 cut(s)	12
ApeKI	GCWGC	5 cut(s)	452, 859, 1211, 1287, 1353
ApoI	RAATTY	2 cut(s)	424, 446
AsiSI	GCGATCGC	1 cut(s)	242
AspLEI	GCGC	3 cut(s)	7, 1123, 1444
AspS9I	GGNCC	5 cut(s)	143, 192, 732, 833, 880
AsuC2I	CCSGG	1 cut(s)	210
AsuHPI	GGTGA	2 cut(s)	355, 1280
AsuII	TTCGAA	1 cut(s)	221
AvaI	CYCGRG	1 cut(s)	498
AvaII	GGWCC	1 cut(s)	880
AxyI	CCTNAGG	1 cut(s)	948
BaeGI	GKGCMC	2 cut(s)	16, 401
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	3 cut(s)	555, 779, 1068
BbrPI	CACGTG	1 cut(s)	11
BbsI	GAAGAC	2 cut(s)	693, 722
Bbv12I	GWGCWC	4 cut(s)	16, 555, 779, 1068
BbvI	GCAGC	5 cut(s)	439, 871, 1223, 1299, 1365
BccI	CCATC	3 cut(s)	1004, 1090, 1120
BceAI	ACGGC	3 cut(s)	19, 75, 125
BciT130I	CCWGG	2 cut(s)	316, 679
BcnI	CCSGG	1 cut(s)	210
BcoDI	GTCTC	1 cut(s)	1210
BfaI	CTAG	2 cut(s)	1188, 1450
BfoI	RGCGCY	2 cut(s)	8, 1124
BglI	GCCNNNNNGGC	2 cut(s)	661, 1225
BisI	GCNGC	8 cut(s)	191, 453, 836, 839, 860, 1212, 1288, 1354
BlsI	GCNGC	8 cut(s)	192, 454, 837, 840, 861, 1213, 1289, 1355
Bme1390I	CCNGG	3 cut(s)	210, 316, 679
Bme18I	GGWCC	1 cut(s)	880
BmeT110I	CYCGRG	1 cut(s)	498
BmgT120I	GGNCC	5 cut(s)	143, 192, 732, 833, 880
BmiI	GGNNCC	9 cut(s)	6, 33, 89, 644, 734, 744, 834, 882, 1378
BmrFI	CCNGG	3 cut(s)	210, 316, 679
BmrI	ACTGGG	1 cut(s)	764
BmsI	GCATC	2 cut(s)	35, 673
BmuI	ACTGGG	1 cut(s)	764
BpiI	GAAGAC	2 cut(s)	693, 722
BplI	GAGNNNNNCTC	4 cut(s)	652, 684, 931, 963
BpmI	CTGGAG	3 cut(s)	102, 741, 789
Bpu14I	TTCGAA	1 cut(s)	221
BpuMI	CCSGG	1 cut(s)	210
BsaAI	YACGTR	1 cut(s)	11
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	4 cut(s)	208, 387, 499, 677
BsaWI	WCCGGW	1 cut(s)	1297
BsaXI	ACNNNNNCTCC	2 cut(s)	739, 769
Bsc4I	CCNNNNNNNGG	3 cut(s)	214, 639, 1235
Bse118I	RCCGGY	3 cut(s)	120, 140, 179
Bse1I	ACTGG	6 cut(s)	85, 633, 758, 770, 806, 1332
Bse21I	CCTNAGG	1 cut(s)	948
Bse3DI	GCAATG	2 cut(s)	1149, 1333
BseBI	CCWGG	2 cut(s)	316, 679
BseDI	CCNNGG	4 cut(s)	208, 387, 499, 677
BseGI	GGATG	4 cut(s)	664, 1015, 1021, 1435
BseLI	CCNNNNNNNGG	3 cut(s)	214, 639, 1235
BseMI	GCAATG	2 cut(s)	1149, 1333
BseMII	CTCAG	5 cut(s)	104, 648, 711, 962, 1221
BseNI	ACTGG	6 cut(s)	85, 633, 758, 770, 806, 1332
BseRI	GAGGAG	8 cut(s)	563, 618, 632, 660, 923, 1179, 1369, 1372
BseSI	GKGCMC	2 cut(s)	16, 401
BseXI	GCAGC	5 cut(s)	439, 871, 1223, 1299, 1365
BseYI	CCCAGC	4 cut(s)	145, 751, 763, 922
BsgI	GTGCAG	1 cut(s)	992
Bsh1236I	CGCG	1 cut(s)	1442
Bsh1285I	CGRYCG	3 cut(s)	204, 242, 1072
BshFI	GGCC	7 cut(s)	144, 193, 504, 632, 733, 835, 1228
BshNI	GGYRCC	1 cut(s)	4
BsiEI	CGRYCG	3 cut(s)	204, 242, 1072
BsiHKAI	GWGCWC	4 cut(s)	16, 555, 779, 1068
BsiHKCI	CYCGRG	1 cut(s)	498
BsiSI	CCGG	7 cut(s)	121, 141, 180, 210, 740, 1298, 1359
BslFI	GGGAC	3 cut(s)	596, 746, 939
BslI	CCNNNNNNNGG	3 cut(s)	214, 639, 1235
BsmAI	GTCTC	1 cut(s)	1210
BsmFI	GGGAC	3 cut(s)	596, 746, 939
BsmI	GAATGC	1 cut(s)	244
BsnI	GGCC	7 cut(s)	144, 193, 504, 632, 733, 835, 1228
BsoBI	CYCGRG	1 cut(s)	498
Bsp119I	TTCGAA	1 cut(s)	221
Bsp1286I	GDGCHC	5 cut(s)	16, 401, 555, 779, 1068
Bsp143I	GATC	7 cut(s)	201, 239, 318, 391, 598, 705, 1069
Bsp19I	CCATGG	1 cut(s)	387
BspACI	CCGC	5 cut(s)	190, 487, 674, 836, 839
BspANI	GGCC	7 cut(s)	144, 193, 504, 632, 733, 835, 1228
BspCNI	CTCAG	5 cut(s)	105, 649, 712, 961, 1220
BspFNI	CGCG	1 cut(s)	1442
BspHI	TCATGA	1 cut(s)	358
BspLI	GGNNCC	9 cut(s)	6, 33, 89, 644, 734, 744, 834, 882, 1378
BspPI	GGATC	3 cut(s)	326, 399, 606
BspQI	GCTCTTC	1 cut(s)	560
BspT104I	TTCGAA	1 cut(s)	221
BspT107I	GGYRCC	1 cut(s)	4
BsrDI	GCAATG	2 cut(s)	1149, 1333
BsrFI	RCCGGY	3 cut(s)	120, 140, 179
BsrI	ACTGG	6 cut(s)	85, 633, 758, 770, 806, 1332
BssAI	RCCGGY	3 cut(s)	120, 140, 179
BssECI	CCNNGG	4 cut(s)	208, 387, 499, 677
BssMI	GATC	7 cut(s)	201, 239, 318, 391, 598, 705, 1069
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	387
Bst2UI	CCWGG	2 cut(s)	316, 679
Bst4CI	ACNGT	2 cut(s)	55, 403
Bst6I	CTCTTC	1 cut(s)	560
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	2 cut(s)	943, 970
BstBAI	YACGTR	1 cut(s)	11
BstBI	TTCGAA	1 cut(s)	221
BstC8I	GCNNGC	7 cut(s)	122, 142, 181, 312, 630, 944, 1185
BstDEI	CTNAG	6 cut(s)	113, 657, 720, 948, 1207, 1221
BstDSI	CCRYGG	1 cut(s)	387
BstF5I	GGATG	4 cut(s)	664, 1015, 1021, 1435
BstFNI	CGCG	1 cut(s)	1442
BstH2I	RGCGCY	2 cut(s)	8, 1124
BstHHI	GCGC	3 cut(s)	7, 1123, 1444
BstKTI	GATC	7 cut(s)	204, 242, 321, 394, 601, 708, 1072
BstMAI	GTCTC	1 cut(s)	1210
BstMBI	GATC	7 cut(s)	201, 239, 318, 391, 598, 705, 1069
BstMCI	CGRYCG	3 cut(s)	204, 242, 1072
BstNI	CCWGG	2 cut(s)	316, 679
BstNSI	RCATGY	1 cut(s)	1279
BstSCI	CCNGG	3 cut(s)	208, 314, 677
BstSLI	GKGCMC	2 cut(s)	16, 401
BstUI	CGCG	1 cut(s)	1442
BstV1I	GCAGC	5 cut(s)	439, 871, 1223, 1299, 1365
BstV2I	GAAGAC	2 cut(s)	693, 722
BstX2I	RGATCY	2 cut(s)	318, 391
BstXI	CCANNNNNNTGG	1 cut(s)	394
BstYI	RGATCY	2 cut(s)	318, 391
Bsu36I	CCTNAGG	1 cut(s)	948
BsuRI	GGCC	7 cut(s)	144, 193, 504, 632, 733, 835, 1228
BtgI	CCRYGG	1 cut(s)	387
BtsCI	GGATG	4 cut(s)	664, 1015, 1021, 1435
BtsI	GCAGTG	1 cut(s)	1378
BtsIMutI	CAGTG	4 cut(s)	399, 777, 813, 1378
Cac8I	GCNNGC	7 cut(s)	122, 142, 181, 312, 630, 944, 1185
CaiI	CAGNNNCTG	2 cut(s)	565, 1403
CciI	TCATGA	1 cut(s)	358
CfoI	GCGC	3 cut(s)	7, 1123, 1444
Cfr10I	RCCGGY	3 cut(s)	120, 140, 179
Cfr13I	GGNCC	5 cut(s)	143, 192, 732, 833, 880
CseI	GACGC	1 cut(s)	1103
CviAII	CATG	8 cut(s)	359, 388, 484, 506, 647, 700, 904, 1276
DdeI	CTNAG	6 cut(s)	113, 657, 720, 948, 1207, 1221
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	7 cut(s)	203, 241, 320, 393, 600, 707, 1071
DpnII	GATC	7 cut(s)	201, 239, 318, 391, 598, 705, 1069
DraI	TTTAAA	1 cut(s)	1002
Eam1104I	CTCTTC	1 cut(s)	560
EarI	CTCTTC	1 cut(s)	560
EciI	GGCGGA	1 cut(s)	663
Ecl136II	GAGCTC	3 cut(s)	553, 777, 1066
Eco130I	CCWWGG	1 cut(s)	387
Eco24I	GRGCYC	3 cut(s)	555, 779, 1068
Eco47I	GGWCC	1 cut(s)	880
Eco47III	AGCGCT	1 cut(s)	1122
Eco53kI	GAGCTC	3 cut(s)	553, 777, 1066
Eco57I	CTGAAG	1 cut(s)	1398
Eco72I	CACGTG	1 cut(s)	11
Eco81I	CCTNAGG	1 cut(s)	948
Eco88I	CYCGRG	1 cut(s)	498
EcoICRI	GAGCTC	3 cut(s)	553, 777, 1066
EcoO109I	RGGNCCY	1 cut(s)	880
EcoRII	CCWGG	2 cut(s)	314, 677
EcoT14I	CCWWGG	1 cut(s)	387
EcoT38I	GRGCYC	3 cut(s)	555, 779, 1068
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	387
FaeI	CATG	8 cut(s)	362, 391, 487, 509, 650, 703, 907, 1279
FalI	AAGNNNNNCTT	2 cut(s)	179, 211
FaqI	GGGAC	3 cut(s)	596, 746, 939
FatI	CATG	8 cut(s)	358, 387, 483, 505, 646, 699, 903, 1275
FblI	GTMKAC	1 cut(s)	513
Fnu4HI	GCNGC	8 cut(s)	191, 453, 836, 839, 860, 1212, 1288, 1354
FokI	GGATG	4 cut(s)	651, 1022, 1028, 1442
FriOI	GRGCYC	3 cut(s)	555, 779, 1068
Fsp4HI	GCNGC	8 cut(s)	191, 453, 836, 839, 860, 1212, 1288, 1354
FspBI	CTAG	2 cut(s)	1188, 1450
GlaI	GCGC	3 cut(s)	6, 1122, 1443
GluI	GCNGC	8 cut(s)	191, 453, 836, 839, 860, 1212, 1288, 1354
GsaI	CCCAGC	4 cut(s)	149, 755, 767, 926
GsuI	CTGGAG	3 cut(s)	102, 741, 789
HaeII	RGCGCY	2 cut(s)	8, 1124
HaeIII	GGCC	7 cut(s)	144, 193, 504, 632, 733, 835, 1228
HapII	CCGG	7 cut(s)	121, 141, 180, 210, 740, 1298, 1359
HgaI	GACGC	1 cut(s)	1103
HhaI	GCGC	3 cut(s)	7, 1123, 1444
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	8 cut(s)	362, 391, 487, 509, 650, 703, 907, 1279
Hin6I	GCGC	3 cut(s)	5, 1121, 1442
HinP1I	GCGC	3 cut(s)	5, 1121, 1442
HindIII	AAGCTT	1 cut(s)	353
HinfI	GANTC	5 cut(s)	218, 412, 1394, 1400, 1424
HpaII	CCGG	7 cut(s)	121, 141, 180, 210, 740, 1298, 1359
HphI	GGTGA	2 cut(s)	355, 1280
Hpy166II	GTNNAC	2 cut(s)	14, 514
Hpy188I	TCNGA	6 cut(s)	31, 96, 250, 613, 1399, 1429
Hpy188III	TCNNGA	3 cut(s)	359, 950, 1172
Hpy8I	GTNNAC	2 cut(s)	14, 514
HpyAV	CCTTC	2 cut(s)	67, 823
HpyCH4III	ACNGT	2 cut(s)	55, 403
HpyCH4IV	ACGT	1 cut(s)	10
HpyCH4V	TGCA	5 cut(s)	14, 26, 628, 937, 973
HpyF3I	CTNAG	6 cut(s)	113, 657, 720, 948, 1207, 1221
HpySE526I	ACGT	1 cut(s)	10
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	8 cut(s)	362, 391, 487, 509, 650, 703, 907, 1279
HspAI	GCGC	3 cut(s)	5, 1121, 1442
KasI	GGCGCC	1 cut(s)	4
KroI	GCCGGC	3 cut(s)	120, 140, 179
KroNI	GCCGGC	3 cut(s)	122, 142, 181
Kzo9I	GATC	7 cut(s)	201, 239, 318, 391, 598, 705, 1069
LguI	GCTCTTC	1 cut(s)	560
LmnI	GCTCC	9 cut(s)	31, 87, 550, 748, 760, 961, 1063, 1361, 1382
Lsp1109I	GCAGC	5 cut(s)	439, 871, 1223, 1299, 1365
LweI	GCATC	2 cut(s)	35, 673
MaeI	CTAG	2 cut(s)	1188, 1450
MaeII	ACGT	1 cut(s)	10
MaeIII	GTNAC	3 cut(s)	343, 1078, 1421
MalI	GATC	7 cut(s)	203, 241, 320, 393, 600, 707, 1071
MboI	GATC	7 cut(s)	201, 239, 318, 391, 598, 705, 1069
MflI	RGATCY	2 cut(s)	318, 391
MhlI	GDGCHC	5 cut(s)	16, 401, 555, 779, 1068
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	1418
MmeI	TCCRAC	1 cut(s)	770
MroNI	GCCGGC	3 cut(s)	120, 140, 179
MseI	TTAA	2 cut(s)	1001, 1110
MslI	CAYNNNNRTG	1 cut(s)	1280
MspI	CCGG	7 cut(s)	121, 141, 180, 210, 740, 1298, 1359
MspR9I	CCNGG	3 cut(s)	210, 316, 679
Mva1269I	GAATGC	1 cut(s)	244
MvaI	CCWGG	2 cut(s)	316, 679
MvnI	CGCG	1 cut(s)	1442
NaeI	GCCGGC	3 cut(s)	122, 142, 181
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	1 cut(s)	210
NcoI	CCATGG	1 cut(s)	387
NdeII	GATC	7 cut(s)	201, 239, 318, 391, 598, 705, 1069
NgoMIV	GCCGGC	3 cut(s)	120, 140, 179
NlaIII	CATG	8 cut(s)	362, 391, 487, 509, 650, 703, 907, 1279
NlaIV	GGNNCC	9 cut(s)	6, 33, 89, 644, 734, 744, 834, 882, 1378
NmuCI	GTSAC	2 cut(s)	343, 1421
NspI	RCATGY	1 cut(s)	1279
NspV	TTCGAA	1 cut(s)	221
PagI	TCATGA	1 cut(s)	358
PciSI	GCTCTTC	1 cut(s)	560
PctI	GAATGC	1 cut(s)	244
PdiI	GCCGGC	3 cut(s)	122, 142, 181
PfeI	GAWTC	4 cut(s)	218, 412, 1394, 1400
PflMI	CCANNNNNTGG	1 cut(s)	639
PkrI	GCNGC	8 cut(s)	192, 454, 837, 840, 861, 1213, 1289, 1355
Ple19I	CGATCG	3 cut(s)	204, 242, 1072
PleI	GAGTC	1 cut(s)	1418
PluTI	GGCGCC	1 cut(s)	8
PmaCI	CACGTG	1 cut(s)	11
PmlI	CACGTG	1 cut(s)	11
PpsI	GAGTC	1 cut(s)	1418
Ppu21I	YACGTR	1 cut(s)	11
PpuMI	RGGWCCY	1 cut(s)	880
PsiI	TTATAA	1 cut(s)	1089
Psp124BI	GAGCTC	3 cut(s)	555, 779, 1068
Psp5II	RGGWCCY	1 cut(s)	880
Psp6I	CCWGG	2 cut(s)	314, 677
PspCI	CACGTG	1 cut(s)	11
PspFI	CCCAGC	4 cut(s)	145, 751, 763, 922
PspGI	CCWGG	2 cut(s)	314, 677
PspN4I	GGNNCC	9 cut(s)	6, 33, 89, 644, 734, 744, 834, 882, 1378
PspPI	GGNCC	5 cut(s)	143, 192, 732, 833, 880
PspPPI	RGGWCCY	1 cut(s)	880
PstNI	CAGNNNCTG	2 cut(s)	565, 1403
PsuI	RGATCY	2 cut(s)	318, 391
PvuI	CGATCG	3 cut(s)	204, 242, 1072
RgaI	GCGATCGC	1 cut(s)	242
RseI	CAYNNNNRTG	1 cut(s)	1280
SacI	GAGCTC	3 cut(s)	555, 779, 1068
SapI	GCTCTTC	1 cut(s)	560
SaqAI	TTAA	2 cut(s)	1001, 1110
SatI	GCNGC	8 cut(s)	191, 453, 836, 839, 860, 1212, 1288, 1354
Sau3AI	GATC	7 cut(s)	201, 239, 318, 391, 598, 705, 1069
Sau96I	GGNCC	5 cut(s)	143, 192, 732, 833, 880
SchI	GAGTC	1 cut(s)	1418
ScrFI	CCNGG	3 cut(s)	210, 316, 679
SduI	GDGCHC	5 cut(s)	16, 401, 555, 779, 1068
SfaAI	GCGATCGC	1 cut(s)	242
SfaNI	GCATC	2 cut(s)	35, 673
SfoI	GGCGCC	1 cut(s)	6
SfuI	TTCGAA	1 cut(s)	221
SgfI	GCGATCGC	1 cut(s)	242
SinI	GGWCC	1 cut(s)	880
SmiMI	CAYNNNNRTG	1 cut(s)	1280
SsiI	CCGC	5 cut(s)	190, 487, 674, 836, 839
SspDI	GGCGCC	1 cut(s)	4
SspMI	CTAG	2 cut(s)	1188, 1450
SstI	GAGCTC	3 cut(s)	555, 779, 1068
StyD4I	CCNGG	3 cut(s)	208, 314, 677
StyI	CCWWGG	1 cut(s)	387
TaaI	ACNGT	2 cut(s)	55, 403
TaiI	ACGT	1 cut(s)	13
TaqI	TCGA	7 cut(s)	185, 221, 434, 601, 708, 1044, 1068
TauI	GCSGC	3 cut(s)	193, 838, 841
TfiI	GAWTC	4 cut(s)	218, 412, 1394, 1400
Tru1I	TTAA	2 cut(s)	1001, 1110
Tru9I	TTAA	2 cut(s)	1001, 1110
TscAI	CASTG	4 cut(s)	406, 777, 813, 1378
TseFI	GTSAC	2 cut(s)	343, 1421
TseI	GCWGC	5 cut(s)	452, 859, 1211, 1287, 1353
Tsp45I	GTSAC	2 cut(s)	343, 1421
TspDTI	ATGAA	7 cut(s)	113, 281, 314, 347, 365, 716, 1266
TspGWI	ACGGA	2 cut(s)	28, 120
TspRI	CASTG	4 cut(s)	406, 777, 813, 1378
Van91I	CCANNNNNTGG	1 cut(s)	639
VneI	GTGCAC	1 cut(s)	12
VpaK11BI	GGWCC	1 cut(s)	880
XapI	RAATTY	2 cut(s)	424, 446
XceI	RCATGY	1 cut(s)	1279
XmiI	GTMKAC	1 cut(s)	513
XspI	CTAG	2 cut(s)	1188, 1450

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.